Miyakogusa Predicted Gene

Lj0g3v0230059.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0230059.1 tr|G7K4U8|G7K4U8_MEDTR Cytochrome c oxidase
assembly protein COX15-like protein OS=Medicago truncatu,64.77,3e-19,
,NODE_74174_length_423_cov_20.888889.path1.1
         (84 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7K4U8_MEDTR (tr|G7K4U8) Cytochrome c oxidase assembly protein C...    99   5e-19
I1JJM8_SOYBN (tr|I1JJM8) Uncharacterized protein OS=Glycine max ...    86   5e-15
C6TNP7_SOYBN (tr|C6TNP7) Putative uncharacterized protein (Fragm...    86   6e-15
G7JAZ9_MEDTR (tr|G7JAZ9) Cytochrome c oxidase assembly protein C...    75   9e-12
I3SJR7_MEDTR (tr|I3SJR7) Uncharacterized protein OS=Medicago tru...    75   1e-11
B7FJU5_MEDTR (tr|B7FJU5) Putative uncharacterized protein (Fragm...    75   1e-11
I1M6C9_SOYBN (tr|I1M6C9) Uncharacterized protein OS=Glycine max ...    74   1e-11

>G7K4U8_MEDTR (tr|G7K4U8) Cytochrome c oxidase assembly protein COX15-like
           protein OS=Medicago truncatula GN=MTR_5g096830 PE=3 SV=1
          Length = 627

 Score = 99.0 bits (245), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/88 (64%), Positives = 66/88 (75%), Gaps = 5/88 (5%)

Query: 1   MFGRGTAFSILKRSREAA-IHKL--RGTTTRPFSHPSA-QESFKFLSPSIAS-HGFRAFR 55
           MFGRG   S LKRS+EA  I KL  R T T PFSHP+  Q+SFKF +PS+ S H FR FR
Sbjct: 169 MFGRGAVGSFLKRSKEAFFIQKLVGRNTATVPFSHPAIEQQSFKFFNPSVVSTHFFRNFR 228

Query: 56  SLPIPKGHHVSYTRSFSKVVSAGAEHKE 83
           S PIPKGHHV +TR+FS VVSAGA+H+E
Sbjct: 229 SHPIPKGHHVPFTRNFSTVVSAGAKHEE 256


>I1JJM8_SOYBN (tr|I1JJM8) Uncharacterized protein OS=Glycine max PE=3 SV=1
          Length = 455

 Score = 85.5 bits (210), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/87 (57%), Positives = 61/87 (70%), Gaps = 9/87 (10%)

Query: 1  MFGRGTAFSILKRSREAA--IHKLRGTTTRPFSHPSAQESFKFLSPSIASHGFRAFRSLP 58
          MFGRGT +S+L+R +EA    HKLRGT   PFS+ S+   FKFLSP +++H F AFRS  
Sbjct: 1  MFGRGTVWSVLRRGKEACGGFHKLRGT---PFSYSSSSTPFKFLSPPVSTHCFHAFRSQL 57

Query: 59 IPKGH--HVSYTRSFSKVVSAGAEHKE 83
          IPKGH  HV   R+FSK+VS  AE KE
Sbjct: 58 IPKGHHVHVPQMRNFSKMVS--AEQKE 82


>C6TNP7_SOYBN (tr|C6TNP7) Putative uncharacterized protein (Fragment)
          OS=Glycine max PE=2 SV=1
          Length = 356

 Score = 85.5 bits (210), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 50/87 (57%), Positives = 61/87 (70%), Gaps = 9/87 (10%)

Query: 1  MFGRGTAFSILKRSREAA--IHKLRGTTTRPFSHPSAQESFKFLSPSIASHGFRAFRSLP 58
          MFGRGT +S+L+R +EA    HKLRGT   PFS+ S+   FKFLSP +++H F AFRS  
Sbjct: 1  MFGRGTVWSVLRRGKEACGGFHKLRGT---PFSYSSSSTPFKFLSPPVSTHCFHAFRSQL 57

Query: 59 IPKGH--HVSYTRSFSKVVSAGAEHKE 83
          IPKGH  HV   R+FSK+VS  AE KE
Sbjct: 58 IPKGHHVHVPQMRNFSKMVS--AEQKE 82


>G7JAZ9_MEDTR (tr|G7JAZ9) Cytochrome c oxidase assembly protein COX15-like
           protein OS=Medicago truncatula GN=MTR_3g095790 PE=3 SV=1
          Length = 499

 Score = 75.1 bits (183), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 60/91 (65%), Gaps = 17/91 (18%)

Query: 1   MFGRGTAFSILKRSREAA-IHKLRG----TTTRPFSHPSA--QESFKFLSPSIASHGFRA 53
           MFGR    +ILKRS+E   IHKL G    TTT PFSHPS+  Q+SFKF +PSI++H FR 
Sbjct: 48  MFGR----AILKRSKEICLIHKLTGRKTTTTTIPFSHPSSIQQQSFKFFNPSISTHFFRT 103

Query: 54  FRSLPIPKGHHVSYTRSFSKVVSAGAEHKEG 84
           FRS   PKGH V      SK VSAGA H EG
Sbjct: 104 FRSHNTPKGHRV------SKTVSAGAIHNEG 128


>I3SJR7_MEDTR (tr|I3SJR7) Uncharacterized protein OS=Medicago truncatula PE=2
          SV=1
          Length = 452

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 60/91 (65%), Gaps = 17/91 (18%)

Query: 1  MFGRGTAFSILKRSREAA-IHKLRG----TTTRPFSHPSA--QESFKFLSPSIASHGFRA 53
          MFGR    +ILKRS+E   IHKL G    TTT PFSHPS+  Q+SFKF +PSI++H FR 
Sbjct: 1  MFGR----AILKRSKEICLIHKLTGRKTTTTTIPFSHPSSIQQQSFKFFNPSISTHFFRT 56

Query: 54 FRSLPIPKGHHVSYTRSFSKVVSAGAEHKEG 84
          FRS   PKGH V      SK VSAGA H EG
Sbjct: 57 FRSHNTPKGHRV------SKTVSAGAIHNEG 81


>B7FJU5_MEDTR (tr|B7FJU5) Putative uncharacterized protein (Fragment)
          OS=Medicago truncatula PE=2 SV=1
          Length = 405

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 60/91 (65%), Gaps = 17/91 (18%)

Query: 1  MFGRGTAFSILKRSREAA-IHKLRG----TTTRPFSHPSA--QESFKFLSPSIASHGFRA 53
          MFGR    +ILKRS+E   IHKL G    TTT PFSHPS+  Q+SFKF +PSI++H FR 
Sbjct: 1  MFGR----AILKRSKEICLIHKLTGRKTTTTTIPFSHPSSIQQQSFKFFNPSISTHFFRT 56

Query: 54 FRSLPIPKGHHVSYTRSFSKVVSAGAEHKEG 84
          FRS   PKGH V      SK VSAGA H EG
Sbjct: 57 FRSHNTPKGHRV------SKTVSAGAIHNEG 81


>I1M6C9_SOYBN (tr|I1M6C9) Uncharacterized protein OS=Glycine max PE=3 SV=1
          Length = 456

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/90 (55%), Positives = 58/90 (64%), Gaps = 11/90 (12%)

Query: 1  MFGRGTAFSILKRSREAA-IHKL--RGTTTRPFSHPSAQES-FKFLSPSIASHGFRAFRS 56
          MFGRG  +S+ KR +EA  IHKL  RGT   PFS  S Q   FKFL+P +A+H   AFRS
Sbjct: 1  MFGRGMVWSVWKRGKEACKIHKLCLRGT---PFSSSSTQPPPFKFLTPPVATHYIHAFRS 57

Query: 57 LPIPKGH--HVSYTRSFSKVVSAGAEHKEG 84
             PKGH  HV   R+FSK+VS  AE KEG
Sbjct: 58 QLFPKGHHVHVPQMRNFSKMVS--AEQKEG 85