Miyakogusa Predicted Gene
- Lj0g3v0229879.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0229879.2 tr|B9I7N3|B9I7N3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1097327 PE=3
SV=1,60.87,0.00000008,seg,NULL,CUFF.15033.2
(330 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
G7K3G7_MEDTR (tr|G7K3G7) DNA polymerase OS=Medicago truncatula G... 301 2e-79
I1JJ76_SOYBN (tr|I1JJ76) Uncharacterized protein OS=Glycine max ... 285 1e-74
K7M4K6_SOYBN (tr|K7M4K6) Uncharacterized protein OS=Glycine max ... 271 3e-70
K7M4K7_SOYBN (tr|K7M4K7) Uncharacterized protein OS=Glycine max ... 271 3e-70
G7J1V6_MEDTR (tr|G7J1V6) DNA polymerase OS=Medicago truncatula G... 144 3e-32
G7J1V4_MEDTR (tr|G7J1V4) DNA polymerase OS=Medicago truncatula G... 142 2e-31
B9I7N3_POPTR (tr|B9I7N3) Predicted protein OS=Populus trichocarp... 63 1e-07
K4CHB4_SOLLC (tr|K4CHB4) Uncharacterized protein OS=Solanum lyco... 60 1e-06
Q3LHT0_TOBAC (tr|Q3LHT0) DNA polymerase OS=Nicotiana tabacum GN=... 59 2e-06
M0REV9_MUSAM (tr|M0REV9) Uncharacterized protein OS=Musa acumina... 58 4e-06
B9I0C7_POPTR (tr|B9I0C7) Predicted protein OS=Populus trichocarp... 57 6e-06
>G7K3G7_MEDTR (tr|G7K3G7) DNA polymerase OS=Medicago truncatula GN=MTR_5g092100
PE=3 SV=1
Length = 1084
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/295 (55%), Positives = 197/295 (66%), Gaps = 4/295 (1%)
Query: 36 HRRKMKLIQIVNKYNGIRNFTVPSNYIQFRADSCCLKRTSWGLNRYNDMRYKCSFPYETP 95
HRRK+K IQI + NG+RN T+ SN + RAD C K TS GLN +++ YK +FPY+ P
Sbjct: 40 HRRKIKAIQIAS--NGLRNSTMHSNCV--RADLLCTKLTSLGLNEHSNTGYKHNFPYKNP 95
Query: 96 GRVSFKTFSNAXXXXXXXXXXXXXLNSFLSHETQARAVPVAPYNHEFSTTAAKRALSGGD 155
RV+ FSNA +NS S E Q R V VAP N E STTA +R L+GGD
Sbjct: 96 VRVTLMKFSNASASMLEEMMVEEEVNSSHSSEMQVRKVDVAPCNPELSTTATERKLAGGD 155
Query: 156 NRGWTREKNKLAEGKKEMNDPSKFERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDXX 215
NRGWT KNKLAEGKKEMN +++ERK S+ SNRF S+G++Q S + +SNLV Q
Sbjct: 156 NRGWTLAKNKLAEGKKEMNGTNRYERKSNGSHVSNRFASIGRRQGSSTDVVSNLVRQGHG 215
Query: 216 XXXXXXXXXXXXXXXXXITDSETVVRQFNESSLEISEEKITRVNGDCSFDVTTEESSNAT 275
TDSETVV QFNES+LEISEEKIT+VNGD + T +S++ T
Sbjct: 216 EHVSSSVQYSVLNNSKMFTDSETVVHQFNESALEISEEKITKVNGDDVSEETAMDSTDVT 275
Query: 276 IPREAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACDTEV 330
R+A TD+S+LRDRLC IYEDILVVDNIPLAEEV KM+T KY+HLIYACDTEV
Sbjct: 276 FDRKARRTDQSKLRDRLCRIYEDILVVDNIPLAEEVVKMITVKYRHLIYACDTEV 330
>I1JJ76_SOYBN (tr|I1JJ76) Uncharacterized protein OS=Glycine max PE=3 SV=1
Length = 1077
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/296 (53%), Positives = 192/296 (64%), Gaps = 3/296 (1%)
Query: 36 HRRKMKLIQIVNKYNGIRNFTVPSNYIQFRAD-SCCLKRTSWGLNRYNDMRYKCSFPYET 94
RRKM+ QI YNG+RN TV N++Q RAD SCCLK TS GLN+YN RYK +F ++
Sbjct: 33 QRRKMQSFQI--SYNGLRNSTVLRNFVQSRADFSCCLKGTSVGLNKYNGARYKRNFLCKS 90
Query: 95 PGRVSFKTFSNAXXXXXXXXXXXXXLNSFLSHETQARAVPVAPYNHEFSTTAAKRALSGG 154
P +S SNA LNS E Q R V +A N+EFSTT + LSGG
Sbjct: 91 PVCISSMKISNASTGTLEEMTEEEELNSLRPCEMQVRTVGMAACNNEFSTTTLGKKLSGG 150
Query: 155 DNRGWTREKNKLAEGKKEMNDPSKFERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDX 214
D RGWT K+KL E KKEMN +KFER+ GS ASN S+ Q QAV +N S +VLQD
Sbjct: 151 DYRGWTMAKDKLTENKKEMNGSNKFERENGSFSASNGIASIAQNQAVPRNGDSIIVLQDP 210
Query: 215 XXXXXXXXXXXXXXXXXXITDSETVVRQFNESSLEISEEKITRVNGDCSFDVTTEESSNA 274
+TDSE V+ Q+N SSL I +EK+ VNGD D T ++S+NA
Sbjct: 211 GTHAPSSVNYSVLNNSKVLTDSEKVIHQYNGSSLGIGKEKVIVVNGDHGLDETAKDSTNA 270
Query: 275 TIPREAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACDTEV 330
T+ ++A GTD+S+LRDRLCSIY+DILVVDNIPLAEEV+KMLT KY+HLIYACDTEV
Sbjct: 271 TLTKQACGTDQSKLRDRLCSIYDDILVVDNIPLAEEVSKMLTTKYRHLIYACDTEV 326
>K7M4K6_SOYBN (tr|K7M4K6) Uncharacterized protein OS=Glycine max PE=3 SV=1
Length = 1090
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/296 (52%), Positives = 187/296 (63%), Gaps = 6/296 (2%)
Query: 36 HRRKMKLIQIVNKYNGIRNFTVPSNYIQFRAD-SCCLKRTSWGLNRYNDMRYKCSFPYET 94
RRKM+ I +RN TV NY+ RAD SCCLK TS GLN+YN +RYK +F ++
Sbjct: 50 QRRKMQSFHI-----SLRNSTVLRNYVLSRADFSCCLKGTSAGLNKYNGVRYKGNFLCKS 104
Query: 95 PGRVSFKTFSNAXXXXXXXXXXXXXLNSFLSHETQARAVPVAPYNHEFSTTAAKRALSGG 154
P +S SNA LNS S ETQ R + +A N+EFSTT + + LSGG
Sbjct: 105 PVCISSMKISNASTSTLEEMTEEEELNSLHSCETQVRTMGMASCNNEFSTTTSGKKLSGG 164
Query: 155 DNRGWTREKNKLAEGKKEMNDPSKFERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDX 214
D RGWT K+KL E KKEMN +KFE + GS ASN S+ Q QAV KN SN+VLQD
Sbjct: 165 DYRGWTIAKDKLTENKKEMNGSNKFESENGSFCASNGVASIDQNQAVPKNGDSNIVLQDP 224
Query: 215 XXXXXXXXXXXXXXXXXXITDSETVVRQFNESSLEISEEKITRVNGDCSFDVTTEESSNA 274
+ DSE V+ Q N SSL I +EK+ VNGD D T ++S+N
Sbjct: 225 GAHVPSSVNYSVLNNSKVLMDSERVIHQHNGSSLGIGKEKVPVVNGDHGLDGTAKDSTNV 284
Query: 275 TIPREAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACDTEV 330
T+ ++A GTD+S+LRDRLCSIY+DILVVDNI LAEEVAKMLT KY+HLIYACDTEV
Sbjct: 285 TLTKQARGTDQSKLRDRLCSIYDDILVVDNIHLAEEVAKMLTTKYRHLIYACDTEV 340
>K7M4K7_SOYBN (tr|K7M4K7) Uncharacterized protein OS=Glycine max PE=3 SV=1
Length = 1074
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/296 (52%), Positives = 187/296 (63%), Gaps = 6/296 (2%)
Query: 36 HRRKMKLIQIVNKYNGIRNFTVPSNYIQFRAD-SCCLKRTSWGLNRYNDMRYKCSFPYET 94
RRKM+ I +RN TV NY+ RAD SCCLK TS GLN+YN +RYK +F ++
Sbjct: 34 QRRKMQSFHI-----SLRNSTVLRNYVLSRADFSCCLKGTSAGLNKYNGVRYKGNFLCKS 88
Query: 95 PGRVSFKTFSNAXXXXXXXXXXXXXLNSFLSHETQARAVPVAPYNHEFSTTAAKRALSGG 154
P +S SNA LNS S ETQ R + +A N+EFSTT + + LSGG
Sbjct: 89 PVCISSMKISNASTSTLEEMTEEEELNSLHSCETQVRTMGMASCNNEFSTTTSGKKLSGG 148
Query: 155 DNRGWTREKNKLAEGKKEMNDPSKFERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDX 214
D RGWT K+KL E KKEMN +KFE + GS ASN S+ Q QAV KN SN+VLQD
Sbjct: 149 DYRGWTIAKDKLTENKKEMNGSNKFESENGSFCASNGVASIDQNQAVPKNGDSNIVLQDP 208
Query: 215 XXXXXXXXXXXXXXXXXXITDSETVVRQFNESSLEISEEKITRVNGDCSFDVTTEESSNA 274
+ DSE V+ Q N SSL I +EK+ VNGD D T ++S+N
Sbjct: 209 GAHVPSSVNYSVLNNSKVLMDSERVIHQHNGSSLGIGKEKVPVVNGDHGLDGTAKDSTNV 268
Query: 275 TIPREAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACDTEV 330
T+ ++A GTD+S+LRDRLCSIY+DILVVDNI LAEEVAKMLT KY+HLIYACDTEV
Sbjct: 269 TLTKQARGTDQSKLRDRLCSIYDDILVVDNIHLAEEVAKMLTTKYRHLIYACDTEV 324
>G7J1V6_MEDTR (tr|G7J1V6) DNA polymerase OS=Medicago truncatula GN=MTR_3g050140
PE=3 SV=1
Length = 1098
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 152/300 (50%), Gaps = 27/300 (9%)
Query: 53 RNFTVPSNYIQFRADSCCLKRTSWGLNRYNDMRYKCSFPYETPGRVSFKTFSNAXXXXXX 112
R+ + +++QFR S C KR S+GL + NDM Y + P + F T S +
Sbjct: 50 RHRNLSGSFLQFREGSYCPKRISFGLKKCNDMEYHRNSPVHI-SVMKFSTASFSTLKVTN 108
Query: 113 XXXXXXXLNSFLSHETQARAVP-VAPYNHEFSTTAAKRALSGGDNRGWTREKNKLAEGKK 171
L+S S++ Q R + ++ S T +R LSG D GW +KL + K
Sbjct: 109 QTRREEELSSLSSYDRQVRMMTHFGSCSYRLSKTP-RRKLSG-DRTGWAEAGHKLTQIKM 166
Query: 172 EMNDPSKFERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDXXXXXXXXXXXXXXXXXX 231
EM+D K R + S + +S+ QK A+++N NL+L D
Sbjct: 167 EMHDLDK--RSLYPSNTNTIASSIAQKPAITQNEGRNLMLHDLCEPASSSVQHSMLNNSM 224
Query: 232 XITDSETVVRQFNESSLEI--------------------SEEKITRVNGDCSFDVTTEES 271
+ D+E V + N SSL+ SEEKI V+G+ S D T +++
Sbjct: 225 LLIDTERVGTESNVSSLKTGEEKIHGVDGTESNVSSLKTSEEKIDNVDGNHSLDATAKDA 284
Query: 272 SNATIP-REAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACDTEV 330
+ A + R ++S+LR+RLCSIYEDILVV+NI AE+VAKMLT Y+HLI+ACDTEV
Sbjct: 285 TKAKLTVRMIRSDEQSKLRERLCSIYEDILVVNNISHAEQVAKMLTVNYRHLIHACDTEV 344
>G7J1V4_MEDTR (tr|G7J1V4) DNA polymerase OS=Medicago truncatula GN=MTR_3g050110
PE=3 SV=1
Length = 1112
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 158/319 (49%), Gaps = 35/319 (10%)
Query: 37 RRKMKLIQIVNKYNGIRNFTVPSNYIQFRADSCCLKRTSWGLNRYNDMRYKCSFPYETPG 96
RRK K IQI + + RN + S +QFR S C KR S+GL + NDM Y + P
Sbjct: 50 RRKSKSIQIASNFLRHRNLSGSS--LQFREGSYCPKRISFGLKKCNDMEYHRNSPVHI-S 106
Query: 97 RVSFKTFSNAXXXXXXXXXXXXXLNSFLSHETQARAVP-VAPYNHEFSTTAAKRALSGGD 155
+ F T S + L+S S++ Q R + ++ S T +R LSG D
Sbjct: 107 VMKFSTASFSTLKVTNQTRREEELSSLSSYDRQVRMMTHFGSCSYRLSKTP-RRKLSG-D 164
Query: 156 NRGWTREKNKLAEGKKEMNDPSKFERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDXX 215
GW +KL + K EM+D K R + S + +S+ QK A+++N NL+L D
Sbjct: 165 RTGWAEAGHKLTQIKMEMHDLDK--RSLYPSNTNTIASSIAQKPAITQNEGHNLMLHDLC 222
Query: 216 XXXXXXXXXXXXXXXXXITDSETVVRQFNESSLEISEEKITRVNG---DCSFDVTTEESS 272
+ D+E V + N SSL+ EEKI V+G + S T+EE
Sbjct: 223 EPASSSVQHSMLNNSMLLIDTERVGTESNVSSLKTGEEKIDGVDGTESNVSSLKTSEEKI 282
Query: 273 N---------------------ATIPREAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEV 311
+ T+ R ++S+LR+RLCSIYEDILVV+NI AE+V
Sbjct: 283 DNVDGNHSLAAAAKDATKAKITVTMTR---SDEQSKLRERLCSIYEDILVVNNISHAEQV 339
Query: 312 AKMLTGKYQHLIYACDTEV 330
AKMLT Y+HLI+ACDTEV
Sbjct: 340 AKMLTVNYRHLIHACDTEV 358
>B9I7N3_POPTR (tr|B9I7N3) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_1097327 PE=3 SV=1
Length = 834
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 285 KSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACDTEV 330
K +R+RL SIYE +LVVDN+ +A+EV LT +Y+HLI+ACDTEV
Sbjct: 31 KLDIRERLTSIYESVLVVDNVTMAKEVVSKLTNQYRHLIHACDTEV 76
>K4CHB4_SOLLC (tr|K4CHB4) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc07g064330.2 PE=3 SV=1
Length = 1119
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 282 GTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACDTEV 330
G D+ LR+RL ++YE + +VDN+ A+EV LT +Y+HL++ACDTEV
Sbjct: 312 GLDQITLRERLGAMYEKVHIVDNLSAAKEVVSKLTSQYKHLVHACDTEV 360
>Q3LHT0_TOBAC (tr|Q3LHT0) DNA polymerase OS=Nicotiana tabacum GN=NtpolI-like1
PE=2 SV=1
Length = 1152
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 279 EAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACDTEV 330
E G + LR+RL ++Y+ + +VDN+ A+EV + LT +Y+HL++ACDTEV
Sbjct: 342 EGTGVSQVSLRERLGAMYDKVHIVDNLSAAKEVVRKLTSQYRHLVHACDTEV 393
>M0REV9_MUSAM (tr|M0REV9) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=3 SV=1
Length = 861
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 38/49 (77%)
Query: 282 GTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACDTEV 330
GT+K R++L IY+++L+VDNI A+EV ++LT +Y+H +ACDTEV
Sbjct: 71 GTNKVVNREQLARIYDEVLIVDNISRAKEVVQLLTTEYKHFFHACDTEV 119
>B9I0C7_POPTR (tr|B9I0C7) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_889688 PE=3 SV=1
Length = 834
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 285 KSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACDTEV 330
K + +RL +IYE +LVVDN +A EV LT +Y+HLI+ACDTEV
Sbjct: 31 KPGIHERLTNIYERVLVVDNASMAREVVSKLTNQYRHLIHACDTEV 76