Miyakogusa Predicted Gene

Lj0g3v0225779.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0225779.1 Non Chatacterized Hit- tr|I1MN82|I1MN82_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56481
PE,63.33,0.000000000000007, ,CUFF.14684.1
         (68 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C6T8Y7_SOYBN (tr|C6T8Y7) Putative uncharacterized protein OS=Gly...    85   1e-14
I1MN82_SOYBN (tr|I1MN82) Uncharacterized protein OS=Glycine max ...    85   1e-14
C6TKC9_SOYBN (tr|C6TKC9) Putative uncharacterized protein OS=Gly...    70   3e-10
M4D5B2_BRARP (tr|M4D5B2) Uncharacterized protein OS=Brassica rap...    60   2e-07

>C6T8Y7_SOYBN (tr|C6T8Y7) Putative uncharacterized protein OS=Glycine max PE=2
          SV=1
          Length = 488

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/60 (63%), Positives = 49/60 (81%), Gaps = 1/60 (1%)

Query: 2  RQGWLISTAASSLFIFLSFAAVSHGLVPPRTLLNRLSEGRYLNSTELWFNNQTLDHFSPY 61
          ++ W+I+TA  SL    SF  +S+G+VPPRTLLN+LSEG+YLN+ ELWF +QTLDHFSPY
Sbjct: 3  QEEWMITTALLSLLFVSSFPPLSYGVVPPRTLLNKLSEGKYLNTQELWF-DQTLDHFSPY 61


>I1MN82_SOYBN (tr|I1MN82) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 488

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/60 (63%), Positives = 49/60 (81%), Gaps = 1/60 (1%)

Query: 2  RQGWLISTAASSLFIFLSFAAVSHGLVPPRTLLNRLSEGRYLNSTELWFNNQTLDHFSPY 61
          ++ W+I+TA  SL    SF  +S+G+VPPRTLLN+LSEG+YLN+ ELWF +QTLDHFSPY
Sbjct: 3  QEEWMITTALLSLLFVSSFPPLSYGVVPPRTLLNKLSEGKYLNTQELWF-DQTLDHFSPY 61


>C6TKC9_SOYBN (tr|C6TKC9) Putative uncharacterized protein OS=Glycine max PE=2
          SV=1
          Length = 490

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/43 (72%), Positives = 37/43 (86%), Gaps = 1/43 (2%)

Query: 19 SFAAVSHGLVPPRTLLNRLSEGRYLNSTELWFNNQTLDHFSPY 61
          SF A+S+G+VPPRTLLN+LS+G YL + E WF NQTLDHFSPY
Sbjct: 23 SFPALSYGVVPPRTLLNKLSQGSYLTTQEQWF-NQTLDHFSPY 64


>M4D5B2_BRARP (tr|M4D5B2) Uncharacterized protein OS=Brassica rapa subsp.
          pekinensis GN=Bra011669 PE=4 SV=1
          Length = 536

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 41/57 (71%), Gaps = 3/57 (5%)

Query: 7  ISTAASSLFIFLS-FAAVSHGLVPPRTLLNRLSE-GRYLNSTELWFNNQTLDHFSPY 61
          ++TAA    + LS F +VSHGLV PR + + LSE G+YL   ELWFN QTLDHFSPY
Sbjct: 1  MATAAIGFLMLLSYFLSVSHGLVQPRRISHGLSESGKYLTRDELWFN-QTLDHFSPY 56