Miyakogusa Predicted Gene

Lj0g3v0224419.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0224419.1 Non Chatacterized Hit- tr|G7J740|G7J740_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,26.77,0.00001,seg,NULL,CUFF.14600.1
         (325 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K7LIP2_SOYBN (tr|K7LIP2) Uncharacterized protein OS=Glycine max ...    65   3e-08

>K7LIP2_SOYBN (tr|K7LIP2) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 226

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 50/74 (67%), Gaps = 6/74 (8%)

Query: 246 LVQKRAAEDELKSGPEK-----RKFSGYDVLKVMAENNAHRSKDEPTLSLLETARLIGIT 300
           +++ R +++E  +G E+      K++ +DVL+V ++NN    ++   LSLL+ A+  G+T
Sbjct: 152 MLKSRRSKNEAATGTERGGNNSEKWNVFDVLRVFSQNNDDVEENHDHLSLLDVAKAHGVT 211

Query: 301 FPRPRWWPKNDDRF 314
           FPRPRWWP +DD+F
Sbjct: 212 FPRPRWWP-DDDKF 224