Miyakogusa Predicted Gene

Lj0g3v0218279.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0218279.1 tr|H3ZPU9|H3ZPU9_THELI
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Thermococcus lit,27.52,6, ,CUFF.14279.1
         (253 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3T5N5_LOTJA (tr|I3T5N5) Uncharacterized protein OS=Lotus japoni...   129   7e-28

>I3T5N5_LOTJA (tr|I3T5N5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 135

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 58/67 (86%), Positives = 62/67 (92%)

Query: 1   MRLEMFTNSYMTTPSGYGWRCPTMADRTEQEIQRFREEHCISRPIDNHISVEYIKYLKDF 60
           MRLEMFT SY+TTPSGYGWRCPTMADRTEQEI+RFREEHCI RPIDNHISVE I+YLKDF
Sbjct: 69  MRLEMFTKSYLTTPSGYGWRCPTMADRTEQEIERFREEHCIYRPIDNHISVEDIRYLKDF 128

Query: 61  NPAAHLP 67
           +PA  LP
Sbjct: 129 DPAILLP 135



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/98 (65%), Positives = 69/98 (70%), Gaps = 8/98 (8%)

Query: 128 AENGKDFAPPVKKFKVDKDLVGGEEHNTDSVPKSMEFTPEEAFEIWRKVFGEEYSGKDEE 187
            ENGKDF PPVKKFKVD         +TDSVPK+MEFTP EAF+IW KV GEEYSG+DEE
Sbjct: 15  VENGKDFTPPVKKFKVDN-------TDTDSVPKAMEFTPAEAFKIWHKVLGEEYSGEDEE 67

Query: 188 VMRLELFTKSYRATPPGYGWRYLRSYIRGRHHIFERLR 225
           VMRLE+FTKSY  TP GYGWR      R    I ER R
Sbjct: 68  VMRLEMFTKSYLTTPSGYGWRCPTMADRTEQEI-ERFR 104