Miyakogusa Predicted Gene

Lj0g3v0216779.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0216779.1 Non Chatacterized Hit- tr|C0P6E0|C0P6E0_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,41.54,0.0000003,seg,NULL,CUFF.13995.1
         (93 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C0P6E0_MAIZE (tr|C0P6E0) Uncharacterized protein OS=Zea mays GN=...    59   5e-07

>C0P6E0_MAIZE (tr|C0P6E0) Uncharacterized protein OS=Zea mays
          GN=ZEAMMB73_743882 PE=2 SV=1
          Length = 167

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 41/65 (63%)

Query: 29 SGHQFKQNDAETVDISSCCGPPTLSILWWNVTKCSSNISGDMSLAGADKPCESKIRNFWL 88
          S  Q + +DAE VD++   G    ++LW  V KC+ N+  DM LA AD P E++IR+ WL
Sbjct: 28 SSEQLQHDDAEAVDVAFRGGLHCQALLWRYVPKCTGNVGADMGLARADYPREAEIRDPWL 87

Query: 89 KIFIE 93
          ++ I+
Sbjct: 88 QVSIQ 92