Miyakogusa Predicted Gene
- Lj0g3v0206989.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0206989.2 tr|B9IDF9|B9IDF9_POPTR DNA-directed RNA
polymerase (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_9,75.51,0,beta and beta-prime subunits of DNA dependent
RNA-polymerase,NULL; seg,NULL; RNA_pol_Rpb2_1,RNA poly,CUFF.13386.2
(486 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
K7L1D4_SOYBN (tr|K7L1D4) DNA-directed RNA polymerase OS=Glycine ... 773 0.0
K7L1D3_SOYBN (tr|K7L1D3) DNA-directed RNA polymerase OS=Glycine ... 773 0.0
K7K145_SOYBN (tr|K7K145) DNA-directed RNA polymerase OS=Glycine ... 759 0.0
B9IDF9_POPTR (tr|B9IDF9) DNA-directed RNA polymerase (Fragment) ... 738 0.0
F6HVA5_VITVI (tr|F6HVA5) Putative uncharacterized protein OS=Vit... 729 0.0
B9SHS2_RICCO (tr|B9SHS2) DNA-directed RNA polymerase OS=Ricinus ... 711 0.0
D7MKV2_ARALL (tr|D7MKV2) DNA-directed RNA polymerase OS=Arabidop... 691 0.0
M1ATE0_SOLTU (tr|M1ATE0) DNA-directed RNA polymerase OS=Solanum ... 691 0.0
K4D2C7_SOLLC (tr|K4D2C7) DNA-directed RNA polymerase OS=Solanum ... 690 0.0
R0GKI2_9BRAS (tr|R0GKI2) Uncharacterized protein OS=Capsella rub... 687 0.0
Q9FKF1_ARATH (tr|Q9FKF1) DNA-directed RNA polymerase OS=Arabidop... 686 0.0
F4KD38_ARATH (tr|F4KD38) DNA-directed RNA polymerase OS=Arabidop... 685 0.0
M4E8I4_BRARP (tr|M4E8I4) DNA-directed RNA polymerase OS=Brassica... 674 0.0
M1ATE1_SOLTU (tr|M1ATE1) DNA-directed RNA polymerase OS=Solanum ... 657 0.0
J3MAJ1_ORYBR (tr|J3MAJ1) DNA-directed RNA polymerase OS=Oryza br... 653 0.0
M0U5V6_MUSAM (tr|M0U5V6) DNA-directed RNA polymerase OS=Musa acu... 652 0.0
K3YPM6_SETIT (tr|K3YPM6) DNA-directed RNA polymerase OS=Setaria ... 649 0.0
K3YPE9_SETIT (tr|K3YPE9) DNA-directed RNA polymerase OS=Setaria ... 648 0.0
Q10JZ2_ORYSJ (tr|Q10JZ2) DNA-directed RNA polymerase OS=Oryza sa... 646 0.0
K4D2C9_SOLLC (tr|K4D2C9) DNA-directed RNA polymerase OS=Solanum ... 646 0.0
Q84R88_ORYSJ (tr|Q84R88) DNA-directed RNA polymerase OS=Oryza sa... 645 0.0
Q10JZ3_ORYSJ (tr|Q10JZ3) DNA-directed RNA polymerase OS=Oryza sa... 645 0.0
I1PC40_ORYGL (tr|I1PC40) DNA-directed RNA polymerase OS=Oryza gl... 645 0.0
I1HXW7_BRADI (tr|I1HXW7) DNA-directed RNA polymerase OS=Brachypo... 639 0.0
M0XLB7_HORVD (tr|M0XLB7) Uncharacterized protein OS=Hordeum vulg... 637 e-180
F2EDG0_HORVD (tr|F2EDG0) Predicted protein OS=Hordeum vulgare va... 637 e-180
M0XLB2_HORVD (tr|M0XLB2) Uncharacterized protein OS=Hordeum vulg... 635 e-179
C5Z6F6_SORBI (tr|C5Z6F6) DNA-directed RNA polymerase OS=Sorghum ... 620 e-175
A9RNX6_PHYPA (tr|A9RNX6) DNA-directed RNA polymerase OS=Physcomi... 616 e-174
D8T979_SELML (tr|D8T979) DNA-directed RNA polymerase OS=Selagine... 608 e-171
D8S1N7_SELML (tr|D8S1N7) DNA-directed RNA polymerase OS=Selagine... 598 e-168
B9F8X6_ORYSJ (tr|B9F8X6) DNA-directed RNA polymerase OS=Oryza sa... 547 e-153
B8AR02_ORYSI (tr|B8AR02) DNA-directed RNA polymerase OS=Oryza sa... 545 e-152
A4RS40_OSTLU (tr|A4RS40) DNA-directed RNA polymerase OS=Ostreoco... 543 e-152
Q01FH9_OSTTA (tr|Q01FH9) DNA-directed RNA polymerase OS=Ostreoco... 543 e-152
M0XLB4_HORVD (tr|M0XLB4) Uncharacterized protein OS=Hordeum vulg... 541 e-151
M0XLB5_HORVD (tr|M0XLB5) Uncharacterized protein OS=Hordeum vulg... 540 e-151
D2VE37_NAEGR (tr|D2VE37) DNA-directed RNA polymerase OS=Naegleri... 523 e-146
C1N4K3_MICPC (tr|C1N4K3) DNA-directed RNA polymerase OS=Micromon... 523 e-146
C1FIF0_MICSR (tr|C1FIF0) DNA-directed RNA polymerase OS=Micromon... 523 e-146
I1CGM4_RHIO9 (tr|I1CGM4) DNA-directed RNA polymerase OS=Rhizopus... 521 e-145
M7NRL0_9ASCO (tr|M7NRL0) Uncharacterized protein OS=Pneumocystis... 511 e-142
L0PG77_PNEJ8 (tr|L0PG77) DNA-directed RNA polymerase OS=Pneumocy... 509 e-142
R9PB27_9BASI (tr|R9PB27) Uncharacterized protein OS=Pseudozyma h... 508 e-141
R9AIR7_WALIC (tr|R9AIR7) DNA-directed RNA polymerase III subunit... 507 e-141
D3B936_POLPA (tr|D3B936) DNA-directed RNA polymerase OS=Polyspho... 506 e-141
C3YYC3_BRAFL (tr|C3YYC3) DNA-directed RNA polymerase OS=Branchio... 506 e-140
E6ZVD4_SPORE (tr|E6ZVD4) DNA-directed RNA polymerase OS=Sporisor... 504 e-140
Q4PBR7_USTMA (tr|Q4PBR7) DNA-directed RNA polymerase OS=Ustilago... 503 e-140
B6JW67_SCHJY (tr|B6JW67) DNA-directed RNA polymerase OS=Schizosa... 503 e-140
G1X681_ARTOA (tr|G1X681) DNA-directed RNA polymerase OS=Arthrobo... 502 e-139
F4RWM5_MELLP (tr|F4RWM5) DNA-directed RNA polymerase OS=Melampso... 502 e-139
K3X1L2_PYTUL (tr|K3X1L2) DNA-directed RNA polymerase OS=Pythium ... 501 e-139
E3K9U7_PUCGT (tr|E3K9U7) DNA-directed RNA polymerase OS=Puccinia... 501 e-139
M9LWJ6_9BASI (tr|M9LWJ6) RNA polymerase III, second largest subu... 499 e-139
G8ZMQ3_TORDC (tr|G8ZMQ3) DNA-directed RNA polymerase OS=Torulasp... 499 e-139
I4YBN3_WALSC (tr|I4YBN3) DNA-directed RNA polymerase OS=Wallemia... 499 e-138
A8PVW9_MALGO (tr|A8PVW9) DNA-directed RNA polymerase OS=Malassez... 499 e-138
J3Q2I0_PUCT1 (tr|J3Q2I0) DNA-directed RNA polymerase OS=Puccinia... 498 e-138
I0Z7N1_9CHLO (tr|I0Z7N1) DNA-directed RNA polymerase OS=Coccomyx... 497 e-138
I2FM84_USTH4 (tr|I2FM84) DNA-directed RNA polymerase OS=Ustilago... 497 e-138
Q6CEE6_YARLI (tr|Q6CEE6) DNA-directed RNA polymerase OS=Yarrowia... 497 e-138
R7TT13_9ANNE (tr|R7TT13) Uncharacterized protein OS=Capitella te... 496 e-138
M2QDB1_CERSU (tr|M2QDB1) DNA-directed RNA polymerase OS=Ceripori... 496 e-138
R4XFH8_9ASCO (tr|R4XFH8) DNA-directed RNA polymerase OS=Taphrina... 496 e-137
M5FVM7_DACSP (tr|M5FVM7) Subunit of DNA dependent RNA-polymerase... 496 e-137
G1KR53_ANOCA (tr|G1KR53) DNA-directed RNA polymerase OS=Anolis c... 495 e-137
F1QQA2_DANRE (tr|F1QQA2) DNA-directed RNA polymerase (Fragment) ... 495 e-137
N1NX57_YEASX (tr|N1NX57) Ret1p OS=Saccharomyces cerevisiae CEN.P... 495 e-137
C8ZGW3_YEAS8 (tr|C8ZGW3) DNA-directed RNA polymerase OS=Saccharo... 495 e-137
C7GWH5_YEAS2 (tr|C7GWH5) DNA-directed RNA polymerase OS=Saccharo... 495 e-137
A6ZP50_YEAS7 (tr|A6ZP50) DNA-directed RNA polymerase OS=Saccharo... 495 e-137
G2WN79_YEASK (tr|G2WN79) DNA-directed RNA polymerase OS=Saccharo... 495 e-137
E7Q9A6_YEASB (tr|E7Q9A6) DNA-directed RNA polymerase OS=Saccharo... 494 e-137
K0KLK2_WICCF (tr|K0KLK2) DNA-directed RNA polymerase OS=Wickerha... 494 e-137
H0H1B7_9SACH (tr|H0H1B7) DNA-directed RNA polymerase OS=Saccharo... 494 e-137
E6RAD8_CRYGW (tr|E6RAD8) DNA-directed RNA polymerase OS=Cryptoco... 494 e-137
J8PYZ9_SACAR (tr|J8PYZ9) DNA-directed RNA polymerase OS=Saccharo... 494 e-137
M4C4J1_HYAAE (tr|M4C4J1) Uncharacterized protein OS=Hyaloperonos... 493 e-137
B2GUR3_XENTR (tr|B2GUR3) DNA-directed RNA polymerase OS=Xenopus ... 493 e-137
J7RTG7_KAZNA (tr|J7RTG7) DNA-directed RNA polymerase OS=Kazachst... 493 e-137
G3PDG5_GASAC (tr|G3PDG5) DNA-directed RNA polymerase OS=Gasteros... 493 e-137
H0GNS7_9SACH (tr|H0GNS7) DNA-directed RNA polymerase OS=Saccharo... 493 e-137
Q5KC33_CRYNJ (tr|Q5KC33) DNA-directed RNA polymerase OS=Cryptoco... 493 e-137
F5HAL3_CRYNB (tr|F5HAL3) DNA-directed RNA polymerase OS=Cryptoco... 493 e-137
F6WGH7_MONDO (tr|F6WGH7) DNA-directed RNA polymerase OS=Monodelp... 492 e-136
K7GBE5_PELSI (tr|K7GBE5) DNA-directed RNA polymerase OS=Pelodisc... 492 e-136
G3WF35_SARHA (tr|G3WF35) DNA-directed RNA polymerase (Fragment) ... 492 e-136
F1SPQ0_PIG (tr|F1SPQ0) DNA-directed RNA polymerase (Fragment) OS... 492 e-136
C5DY85_ZYGRC (tr|C5DY85) DNA-directed RNA polymerase OS=Zygosacc... 492 e-136
H0V470_CAVPO (tr|H0V470) DNA-directed RNA polymerase OS=Cavia po... 491 e-136
H3G9F7_PHYRM (tr|H3G9F7) DNA-directed RNA polymerase OS=Phytopht... 491 e-136
L8H6N0_ACACA (tr|L8H6N0) DNA-directed RNA polymerase OS=Acantham... 491 e-136
H2AXY4_KAZAF (tr|H2AXY4) DNA-directed RNA polymerase OS=Kazachst... 491 e-136
G5C459_HETGA (tr|G5C459) DNA-directed RNA polymerase OS=Heteroce... 491 e-136
Q4S7G7_TETNG (tr|Q4S7G7) DNA-directed RNA polymerase (Fragment) ... 490 e-136
G5ABA9_PHYSP (tr|G5ABA9) DNA-directed RNA polymerase OS=Phytopht... 490 e-136
I3KBR7_ORENI (tr|I3KBR7) DNA-directed RNA polymerase (Fragment) ... 490 e-136
L5KIF8_PTEAL (tr|L5KIF8) DNA-directed RNA polymerase OS=Pteropus... 489 e-136
M3YL36_MUSPF (tr|M3YL36) DNA-directed RNA polymerase OS=Mustela ... 489 e-136
E1BPX6_BOVIN (tr|E1BPX6) Uncharacterized protein OS=Bos taurus G... 489 e-136
E2RHZ2_CANFA (tr|E2RHZ2) DNA-directed RNA polymerase OS=Canis fa... 489 e-136
L8IQP8_BOSMU (tr|L8IQP8) DNA-directed RNA polymerase OS=Bos grun... 489 e-136
F6X4Z9_ORNAN (tr|F6X4Z9) DNA-directed RNA polymerase (Fragment) ... 489 e-136
H0ZLB7_TAEGU (tr|H0ZLB7) DNA-directed RNA polymerase OS=Taeniopy... 489 e-136
F7B4P7_HORSE (tr|F7B4P7) DNA-directed RNA polymerase OS=Equus ca... 489 e-136
D3ZV30_RAT (tr|D3ZV30) DNA-directed RNA polymerase OS=Rattus nor... 489 e-135
D2HXV2_AILME (tr|D2HXV2) DNA-directed RNA polymerase (Fragment) ... 489 e-135
G3SNX7_LOXAF (tr|G3SNX7) DNA-directed RNA polymerase OS=Loxodont... 489 e-135
F7CM98_MACMU (tr|F7CM98) DNA-directed RNA polymerase OS=Macaca m... 489 e-135
E1BRJ4_CHICK (tr|E1BRJ4) DNA-directed RNA polymerase OS=Gallus g... 489 e-135
G1R4M2_NOMLE (tr|G1R4M2) DNA-directed RNA polymerase OS=Nomascus... 489 e-135
H0XBX4_OTOGA (tr|H0XBX4) DNA-directed RNA polymerase OS=Otolemur... 489 e-135
Q7Z3R8_HUMAN (tr|Q7Z3R8) DNA-directed RNA polymerase OS=Homo sap... 488 e-135
R7SWL9_DICSQ (tr|R7SWL9) Beta and beta-prime subunits of DNA dep... 488 e-135
H2Q6S4_PANTR (tr|H2Q6S4) DNA-directed RNA polymerase OS=Pan trog... 488 e-135
H2NIH8_PONAB (tr|H2NIH8) DNA-directed RNA polymerase OS=Pongo ab... 488 e-135
G7PI40_MACFA (tr|G7PI40) DNA-directed RNA polymerase OS=Macaca f... 488 e-135
G1SEA1_RABIT (tr|G1SEA1) DNA-directed RNA polymerase OS=Oryctola... 488 e-135
G1MC66_AILME (tr|G1MC66) DNA-directed RNA polymerase OS=Ailuropo... 488 e-135
F6WH42_MACMU (tr|F6WH42) DNA-directed RNA polymerase OS=Macaca m... 488 e-135
K9INW5_DESRO (tr|K9INW5) DNA-directed RNA polymerase OS=Desmodus... 488 e-135
K5VMD1_PHACS (tr|K5VMD1) DNA-directed RNA polymerase OS=Phaneroc... 488 e-135
F7G4S4_CALJA (tr|F7G4S4) DNA-directed RNA polymerase OS=Callithr... 488 e-135
A8NJT3_COPC7 (tr|A8NJT3) DNA-directed RNA polymerase OS=Coprinop... 488 e-135
H3BBW8_LATCH (tr|H3BBW8) DNA-directed RNA polymerase OS=Latimeri... 488 e-135
G3HNW4_CRIGR (tr|G3HNW4) DNA-directed RNA polymerase OS=Cricetul... 488 e-135
L5LIB3_MYODS (tr|L5LIB3) DNA-directed RNA polymerase OS=Myotis d... 488 e-135
D0N9M5_PHYIT (tr|D0N9M5) DNA-directed RNA polymerase OS=Phytopht... 488 e-135
J9VRY2_CRYNH (tr|J9VRY2) DNA-directed RNA polymerase OS=Cryptoco... 487 e-135
H2TAU8_TAKRU (tr|H2TAU8) DNA-directed RNA polymerase OS=Takifugu... 487 e-135
G3PDF7_GASAC (tr|G3PDF7) DNA-directed RNA polymerase (Fragment) ... 487 e-135
A8IY03_CHLRE (tr|A8IY03) DNA-directed RNA polymerase OS=Chlamydo... 487 e-135
G8JXK4_ERECY (tr|G8JXK4) DNA-directed RNA polymerase OS=Eremothe... 487 e-135
G1PU64_MYOLU (tr|G1PU64) DNA-directed RNA polymerase OS=Myotis l... 487 e-135
M3ZHD1_XIPMA (tr|M3ZHD1) DNA-directed RNA polymerase OS=Xiphopho... 486 e-135
F2QZU4_PICP7 (tr|F2QZU4) DNA-directed RNA polymerase OS=Komagata... 486 e-135
C4R793_PICPG (tr|C4R793) DNA-directed RNA polymerase OS=Komagata... 486 e-135
G0WB51_NAUDC (tr|G0WB51) DNA-directed RNA polymerase OS=Naumovoz... 485 e-134
E7R6J2_PICAD (tr|E7R6J2) DNA-directed RNA polymerase OS=Pichia a... 485 e-134
G0VBC8_NAUCC (tr|G0VBC8) DNA-directed RNA polymerase OS=Naumovoz... 485 e-134
G8BMQ9_TETPH (tr|G8BMQ9) DNA-directed RNA polymerase OS=Tetrapis... 484 e-134
F0W7T0_9STRA (tr|F0W7T0) DNA-directed RNA polymerase OS=Albugo l... 484 e-134
F0VIW5_NEOCL (tr|F0VIW5) DNA-directed RNA polymerase OS=Neospora... 484 e-134
Q75B52_ASHGO (tr|Q75B52) DNA-directed RNA polymerase OS=Ashbya g... 484 e-134
M9N2Z7_ASHGS (tr|M9N2Z7) FADL275Cp OS=Ashbya gossypii FDAG1 GN=F... 484 e-134
I2GYQ1_TETBL (tr|I2GYQ1) DNA-directed RNA polymerase OS=Tetrapis... 483 e-134
M2VX80_GALSU (tr|M2VX80) DNA-directed RNA polymerase OS=Galdieri... 483 e-134
D8UAV8_VOLCA (tr|D8UAV8) DNA-directed RNA polymerase OS=Volvox c... 483 e-134
M5EBC0_MALSM (tr|M5EBC0) Genomic scaffold, msy_sf_12 OS=Malassez... 483 e-134
J8TY60_TRIAS (tr|J8TY60) DNA-directed RNA polymerase OS=Trichosp... 483 e-134
C5DEU3_LACTC (tr|C5DEU3) DNA-directed RNA polymerase OS=Lachance... 483 e-133
F8PML0_SERL3 (tr|F8PML0) DNA-directed RNA polymerase OS=Serpula ... 482 e-133
F8NL30_SERL9 (tr|F8NL30) DNA-directed RNA polymerase OS=Serpula ... 482 e-133
Q4WKH4_ASPFU (tr|Q4WKH4) DNA-directed RNA polymerase OS=Neosarto... 482 e-133
B0XMI5_ASPFC (tr|B0XMI5) DNA-directed RNA polymerase OS=Neosarto... 482 e-133
L1JY82_GUITH (tr|L1JY82) DNA-directed RNA polymerase OS=Guillard... 482 e-133
B6KDI3_TOXGO (tr|B6KDI3) DNA-directed RNA polymerase OS=Toxoplas... 482 e-133
B9Q403_TOXGO (tr|B9Q403) DNA-directed RNA polymerase OS=Toxoplas... 482 e-133
B9PFT5_TOXGO (tr|B9PFT5) DNA-directed RNA polymerase OS=Toxoplas... 482 e-133
H3D3L4_TETNG (tr|H3D3L4) DNA-directed RNA polymerase OS=Tetraodo... 481 e-133
E1ZPD8_CHLVA (tr|E1ZPD8) DNA-directed RNA polymerase OS=Chlorell... 481 e-133
C1GLZ2_PARBD (tr|C1GLZ2) DNA-directed RNA polymerase OS=Paracocc... 481 e-133
Q0CN89_ASPTN (tr|Q0CN89) DNA-directed RNA polymerase OS=Aspergil... 481 e-133
C0SI08_PARBP (tr|C0SI08) DNA-directed RNA polymerase OS=Paracocc... 481 e-133
C1HBD0_PARBA (tr|C1HBD0) DNA-directed RNA polymerase OS=Paracocc... 481 e-133
M7BNZ6_CHEMY (tr|M7BNZ6) DNA-directed RNA polymerase III subunit... 481 e-133
A2Q8V9_ASPNC (tr|A2Q8V9) DNA-directed RNA polymerase OS=Aspergil... 481 e-133
G7X993_ASPKW (tr|G7X993) DNA-directed RNA polymerase OS=Aspergil... 481 e-133
K9HCW9_AGABB (tr|K9HCW9) DNA-directed RNA polymerase OS=Agaricus... 480 e-133
I8A634_ASPO3 (tr|I8A634) DNA-directed RNA polymerase OS=Aspergil... 480 e-133
B8MYG2_ASPFN (tr|B8MYG2) DNA-directed RNA polymerase OS=Aspergil... 480 e-133
A9V2W9_MONBE (tr|A9V2W9) DNA-directed RNA polymerase OS=Monosiga... 479 e-133
A3LP81_PICST (tr|A3LP81) DNA-directed RNA polymerase OS=Scheffer... 479 e-133
G3XSL0_ASPNA (tr|G3XSL0) DNA-directed RNA polymerase OS=Aspergil... 479 e-133
A1D510_NEOFI (tr|A1D510) DNA-directed RNA polymerase OS=Neosarto... 479 e-133
Q2URF4_ASPOR (tr|Q2URF4) DNA-directed RNA polymerase OS=Aspergil... 479 e-133
M3WMY5_FELCA (tr|M3WMY5) DNA-directed RNA polymerase OS=Felis ca... 479 e-132
Q6CLR1_KLULA (tr|Q6CLR1) DNA-directed RNA polymerase OS=Kluyvero... 479 e-132
I1FS94_AMPQE (tr|I1FS94) DNA-directed RNA polymerase OS=Amphimed... 479 e-132
K5XNJ2_AGABU (tr|K5XNJ2) DNA-directed RNA polymerase OS=Agaricus... 479 e-132
B8BQM2_THAPS (tr|B8BQM2) DNA-directed RNA polymerase OS=Thalassi... 478 e-132
A7TQC8_VANPO (tr|A7TQC8) DNA-directed RNA polymerase OS=Vanderwa... 478 e-132
Q5BGK9_EMENI (tr|Q5BGK9) Putative uncharacterized protein OS=Eme... 478 e-132
J4GNY8_FIBRA (tr|J4GNY8) DNA-directed RNA polymerase OS=Fibropor... 478 e-132
C8VU19_EMENI (tr|C8VU19) DNA-directed RNA polymerase OS=Emericel... 478 e-132
B0D7Q0_LACBS (tr|B0D7Q0) DNA-directed RNA polymerase OS=Laccaria... 478 e-132
G8YDB2_PICSO (tr|G8YDB2) DNA-directed RNA polymerase OS=Pichia s... 477 e-132
C5JTE0_AJEDS (tr|C5JTE0) DNA-directed RNA polymerase OS=Ajellomy... 477 e-132
H3C732_TETNG (tr|H3C732) DNA-directed RNA polymerase (Fragment) ... 477 e-132
G8YFR8_PICSO (tr|G8YFR8) DNA-directed RNA polymerase OS=Pichia s... 477 e-132
F2TRM7_AJEDA (tr|F2TRM7) DNA-directed RNA polymerase OS=Ajellomy... 476 e-132
C5GKN6_AJEDR (tr|C5GKN6) DNA-directed RNA polymerase OS=Ajellomy... 476 e-132
H8X656_CANO9 (tr|H8X656) DNA-directed RNA polymerase OS=Candida ... 476 e-132
G7DT94_MIXOS (tr|G7DT94) DNA-directed RNA polymerase OS=Mixia os... 476 e-132
M7X8Z1_RHOTO (tr|M7X8Z1) DNA-directed RNA polymerase III subunit... 476 e-131
C5M3E6_CANTT (tr|C5M3E6) DNA-directed RNA polymerase OS=Candida ... 475 e-131
Q6FLJ9_CANGA (tr|Q6FLJ9) DNA-directed RNA polymerase OS=Candida ... 475 e-131
A1CS37_ASPCL (tr|A1CS37) DNA-directed RNA polymerase OS=Aspergil... 475 e-131
C0P0A1_AJECG (tr|C0P0A1) DNA-directed RNA polymerase OS=Ajellomy... 474 e-131
H2M5Z0_ORYLA (tr|H2M5Z0) DNA-directed RNA polymerase OS=Oryzias ... 473 e-131
B6QHR9_PENMQ (tr|B6QHR9) DNA-directed RNA polymerase OS=Penicill... 473 e-131
G3B8K7_CANTC (tr|G3B8K7) DNA-directed RNA polymerase OS=Candida ... 473 e-131
C4Y486_CLAL4 (tr|C4Y486) DNA-directed RNA polymerase OS=Clavispo... 473 e-131
G8BG27_CANPC (tr|G8BG27) DNA-directed RNA polymerase OS=Candida ... 472 e-130
C6HGH3_AJECH (tr|C6HGH3) DNA-directed RNA polymerase OS=Ajellomy... 471 e-130
B5RUZ7_DEBHA (tr|B5RUZ7) DNA-directed RNA polymerase OS=Debaryom... 471 e-130
M3JZW2_CANMA (tr|M3JZW2) DNA-directed RNA polymerase (Fragment) ... 471 e-130
N1QYX2_AEGTA (tr|N1QYX2) DNA-directed RNA polymerase III subunit... 471 e-130
A5E0Z1_LODEL (tr|A5E0Z1) DNA-directed RNA polymerase OS=Lodderom... 471 e-130
C4JMP0_UNCRE (tr|C4JMP0) DNA-directed RNA polymerase OS=Uncinoca... 471 e-130
B0WCT6_CULQU (tr|B0WCT6) Putative uncharacterized protein OS=Cul... 471 e-130
A5DLE5_PICGU (tr|A5DLE5) DNA-directed RNA polymerase OS=Meyerozy... 470 e-130
A6R9I0_AJECN (tr|A6R9I0) DNA-directed RNA polymerase OS=Ajellomy... 470 e-130
B9WLY1_CANDC (tr|B9WLY1) DNA-directed RNA polymerase OS=Candida ... 470 e-130
G4T5Z4_PIRID (tr|G4T5Z4) DNA-directed RNA polymerase OS=Piriform... 469 e-130
F0UQN3_AJEC8 (tr|F0UQN3) DNA-directed RNA polymerase OS=Ajellomy... 469 e-130
K9GPF6_PEND2 (tr|K9GPF6) DNA-directed RNA polymerase OS=Penicill... 469 e-129
K9G905_PEND1 (tr|K9G905) DNA-directed RNA polymerase OS=Penicill... 469 e-129
J3K8D2_COCIM (tr|J3K8D2) DNA-directed RNA polymerase OS=Coccidio... 469 e-129
L8FPN3_GEOD2 (tr|L8FPN3) DNA-directed RNA polymerase OS=Geomyces... 469 e-129
Q59M52_CANAL (tr|Q59M52) DNA-directed RNA polymerase OS=Candida ... 469 e-129
C4YM03_CANAW (tr|C4YM03) DNA-directed RNA polymerase OS=Candida ... 469 e-129
E9CT81_COCPS (tr|E9CT81) DNA-directed RNA polymerase OS=Coccidio... 469 e-129
C5P7S9_COCP7 (tr|C5P7S9) DNA-directed RNA polymerase OS=Coccidio... 469 e-129
B6HTA4_PENCW (tr|B6HTA4) DNA-directed RNA polymerase OS=Penicill... 469 e-129
H6BS90_EXODN (tr|H6BS90) DNA-directed RNA polymerase OS=Exophial... 468 e-129
B7FVD4_PHATC (tr|B7FVD4) DNA-directed RNA polymerase OS=Phaeodac... 468 e-129
B8MJE1_TALSN (tr|B8MJE1) DNA-directed RNA polymerase OS=Talaromy... 467 e-129
E9GN85_DAPPU (tr|E9GN85) DNA-directed RNA polymerase OS=Daphnia ... 467 e-129
G3AHH8_SPAPN (tr|G3AHH8) DNA-directed RNA polymerase OS=Spathasp... 466 e-129
F2UFB8_SALS5 (tr|F2UFB8) DNA-directed RNA polymerase OS=Salpingo... 466 e-129
D8QFI5_SCHCM (tr|D8QFI5) DNA-directed RNA polymerase OS=Schizoph... 466 e-128
R7QMZ9_CHOCR (tr|R7QMZ9) DNA-directed RNA polymerase (Fragment) ... 465 e-128
J9EMF9_WUCBA (tr|J9EMF9) DNA-directed RNA polymerase OS=Wucherer... 464 e-128
E9CI89_CAPO3 (tr|E9CI89) DNA-directed RNA polymerase OS=Capsaspo... 464 e-128
F2PPR5_TRIEC (tr|F2PPR5) DNA-directed RNA polymerase OS=Trichoph... 464 e-128
F2SPY7_TRIRC (tr|F2SPY7) DNA-directed RNA polymerase OS=Trichoph... 463 e-128
F2RMV1_TRIT1 (tr|F2RMV1) DNA-directed RNA polymerase OS=Trichoph... 463 e-128
D4AS53_ARTBC (tr|D4AS53) DNA-directed RNA polymerase OS=Arthrode... 463 e-128
I2CNY0_9STRA (tr|I2CNY0) DNA-directed RNA polymerase OS=Nannochl... 463 e-128
E4UTX8_ARTGP (tr|E4UTX8) DNA-directed RNA polymerase OS=Arthrode... 463 e-128
D4DEV8_TRIVH (tr|D4DEV8) DNA-directed RNA polymerase OS=Trichoph... 463 e-128
J0DQK5_LOALO (tr|J0DQK5) DNA-directed RNA polymerase OS=Loa loa ... 463 e-128
E3X721_ANODA (tr|E3X721) DNA-directed RNA polymerase OS=Anophele... 462 e-127
J9E9F1_AEDAE (tr|J9E9F1) DNA-directed RNA polymerase OS=Aedes ae... 461 e-127
A8P4S3_BRUMA (tr|A8P4S3) DNA-directed RNA polymerase III subunit... 461 e-127
K6VG34_9APIC (tr|K6VG34) DNA-directed RNA polymerase OS=Plasmodi... 460 e-127
C5FVS4_ARTOC (tr|C5FVS4) DNA-directed RNA polymerase OS=Arthrode... 460 e-127
Q7Q416_ANOGA (tr|Q7Q416) DNA-directed RNA polymerase (Fragment) ... 459 e-126
E9GDR7_DAPPU (tr|E9GDR7) DNA-directed RNA polymerase OS=Daphnia ... 459 e-126
F1KSY5_ASCSU (tr|F1KSY5) DNA-directed RNA polymerase OS=Ascaris ... 458 e-126
F7APP9_XENTR (tr|F7APP9) DNA-directed RNA polymerase OS=Xenopus ... 458 e-126
Q8I5X9_PLAF7 (tr|Q8I5X9) DNA-directed RNA polymerase OS=Plasmodi... 457 e-126
A5K0G6_PLAVS (tr|A5K0G6) DNA-directed RNA polymerase OS=Plasmodi... 457 e-126
R7YIR8_9EURO (tr|R7YIR8) DNA-directed RNA polymerase III subunit... 456 e-126
D6WK19_TRICA (tr|D6WK19) DNA-directed RNA polymerase OS=Triboliu... 456 e-126
B3LB54_PLAKH (tr|B3LB54) DNA-directed RNA polymerase OS=Plasmodi... 456 e-126
G2YDK5_BOTF4 (tr|G2YDK5) DNA-directed RNA polymerase OS=Botryoti... 456 e-125
M7V1H1_BOTFU (tr|M7V1H1) Putative dna-directed rna polymerase ii... 456 e-125
H0EF07_GLAL7 (tr|H0EF07) DNA-directed RNA polymerase OS=Glarea l... 455 e-125
F7APW2_XENTR (tr|F7APW2) DNA-directed RNA polymerase OS=Xenopus ... 455 e-125
K1XUA1_MARBU (tr|K1XUA1) DNA-directed RNA polymerase OS=Marssoni... 454 e-125
B7Q0E7_IXOSC (tr|B7Q0E7) DNA-directed RNA polymerase (Fragment) ... 453 e-125
Q7RNH0_PLAYO (tr|Q7RNH0) DNA-directed RNA polymerase OS=Plasmodi... 452 e-124
H9KCM7_APIME (tr|H9KCM7) DNA-directed RNA polymerase OS=Apis mel... 451 e-124
E3S421_PYRTT (tr|E3S421) DNA-directed RNA polymerase OS=Pyrenoph... 448 e-123
B4MR22_DROWI (tr|B4MR22) DNA-directed RNA polymerase OS=Drosophi... 447 e-123
B2W234_PYRTR (tr|B2W234) DNA-directed RNA polymerase OS=Pyrenoph... 447 e-123
E9J5Y8_SOLIN (tr|E9J5Y8) DNA-directed RNA polymerase (Fragment) ... 447 e-123
A7EEL3_SCLS1 (tr|A7EEL3) DNA-directed RNA polymerase OS=Scleroti... 446 e-123
K7IUQ9_NASVI (tr|K7IUQ9) DNA-directed RNA polymerase OS=Nasonia ... 446 e-123
H9JWY0_BOMMO (tr|H9JWY0) DNA-directed RNA polymerase OS=Bombyx m... 446 e-123
R0KGZ1_SETTU (tr|R0KGZ1) Uncharacterized protein OS=Setosphaeria... 446 e-123
B4KPU7_DROMO (tr|B4KPU7) DNA-directed RNA polymerase OS=Drosophi... 446 e-122
B4GGQ4_DROPE (tr|B4GGQ4) DNA-directed RNA polymerase OS=Drosophi... 446 e-122
H2Z7P8_CIOSA (tr|H2Z7P8) DNA-directed RNA polymerase OS=Ciona sa... 446 e-122
B3MH37_DROAN (tr|B3MH37) DNA-directed RNA polymerase OS=Drosophi... 446 e-122
F4NYH1_BATDJ (tr|F4NYH1) DNA-directed RNA polymerase OS=Batracho... 445 e-122
Q28ZV6_DROPS (tr|Q28ZV6) DNA-directed RNA polymerase OS=Drosophi... 445 e-122
D5GJN8_TUBMM (tr|D5GJN8) Whole genome shotgun sequence assembly,... 444 e-122
F9X4N6_MYCGM (tr|F9X4N6) DNA-directed RNA polymerase OS=Mycospha... 444 e-122
M3AMI0_9PEZI (tr|M3AMI0) DNA-directed RNA polymerase (Fragment) ... 444 e-122
M3DEV5_9PEZI (tr|M3DEV5) DNA-directed RNA polymerase OS=Mycospha... 443 e-122
B4LKV4_DROVI (tr|B4LKV4) DNA-directed RNA polymerase OS=Drosophi... 443 e-122
B4J5G6_DROGR (tr|B4J5G6) DNA-directed RNA polymerase OS=Drosophi... 443 e-122
M2RVU8_COCSA (tr|M2RVU8) DNA-directed RNA polymerase OS=Bipolari... 442 e-121
M2MYD6_9PEZI (tr|M2MYD6) DNA-directed RNA polymerase OS=Baudoini... 442 e-121
N4XE76_COCHE (tr|N4XE76) Uncharacterized protein OS=Bipolaris ma... 442 e-121
M2TM69_COCHE (tr|M2TM69) DNA-directed RNA polymerase OS=Bipolari... 442 e-121
L8WP20_9HOMO (tr|L8WP20) DNA-directed RNA polymerase OS=Rhizocto... 442 e-121
Q0V2J8_PHANO (tr|Q0V2J8) DNA-directed RNA polymerase OS=Phaeosph... 441 e-121
N4W2X6_COLOR (tr|N4W2X6) DNA-directed RNA polymerase iii polypep... 441 e-121
Q27492_CAEEL (tr|Q27492) DNA-directed RNA polymerase OS=Caenorha... 441 e-121
E3LZ13_CAERE (tr|E3LZ13) DNA-directed RNA polymerase OS=Caenorha... 441 e-121
E4ZZU4_LEPMJ (tr|E4ZZU4) DNA-directed RNA polymerase OS=Leptosph... 439 e-120
F0YMM2_AURAN (tr|F0YMM2) Putative uncharacterized protein (Fragm... 439 e-120
B4P5Q3_DROYA (tr|B4P5Q3) DNA-directed RNA polymerase OS=Drosophi... 438 e-120
H9HZM0_ATTCE (tr|H9HZM0) DNA-directed RNA polymerase OS=Atta cep... 438 e-120
B4QC69_DROSI (tr|B4QC69) DNA-directed RNA polymerase OS=Drosophi... 438 e-120
B4HNX0_DROSE (tr|B4HNX0) DNA-directed RNA polymerase OS=Drosophi... 438 e-120
N1PVF7_MYCPJ (tr|N1PVF7) Uncharacterized protein OS=Dothistroma ... 438 e-120
B3NS93_DROER (tr|B3NS93) DNA-directed RNA polymerase OS=Drosophi... 438 e-120
H2WW66_CAEJA (tr|H2WW66) DNA-directed RNA polymerase OS=Caenorha... 437 e-120
C5K7V0_PERM5 (tr|C5K7V0) DNA-directed RNA polymerase OS=Perkinsu... 437 e-120
A8WJV6_CAEBR (tr|A8WJV6) DNA-directed RNA polymerase OS=Caenorha... 437 e-120
H2TAU9_TAKRU (tr|H2TAU9) Uncharacterized protein OS=Takifugu rub... 437 e-120
F4X6J8_ACREC (tr|F4X6J8) DNA-directed RNA polymerase (Fragment) ... 437 e-120
G3JEV3_CORMM (tr|G3JEV3) DNA-directed RNA polymerase OS=Cordycep... 437 e-120
J9HR66_9SPIT (tr|J9HR66) DNA-directed RNA polymerase OS=Oxytrich... 437 e-120
E3QR78_COLGM (tr|E3QR78) DNA-directed RNA polymerase OS=Colletot... 437 e-120
G0RLP0_HYPJQ (tr|G0RLP0) DNA-directed RNA polymerase OS=Hypocrea... 436 e-120
J4KN85_BEAB2 (tr|J4KN85) DNA-directed RNA polymerase OS=Beauveri... 436 e-119
C9SKJ8_VERA1 (tr|C9SKJ8) DNA-directed RNA polymerase OS=Verticil... 436 e-119
G2XA72_VERDV (tr|G2XA72) DNA-directed RNA polymerase OS=Verticil... 436 e-119
G9NSB8_HYPAI (tr|G9NSB8) DNA-directed RNA polymerase OS=Hypocrea... 435 e-119
H2Z7P9_CIOSA (tr|H2Z7P9) DNA-directed RNA polymerase (Fragment) ... 435 e-119
L2FLY4_COLGN (tr|L2FLY4) DNA-directed RNA polymerase OS=Colletot... 435 e-119
H2Z7Q0_CIOSA (tr|H2Z7Q0) DNA-directed RNA polymerase (Fragment) ... 435 e-119
G6DHA6_DANPL (tr|G6DHA6) DNA-directed RNA polymerase OS=Danaus p... 434 e-119
F0YME8_AURAN (tr|F0YME8) DNA-directed RNA polymerase OS=Aureococ... 434 e-119
H1V0T3_COLHI (tr|H1V0T3) DNA-directed RNA polymerase OS=Colletot... 434 e-119
H3JPQ3_STRPU (tr|H3JPQ3) Uncharacterized protein OS=Strongylocen... 434 e-119
G9NAM0_HYPVG (tr|G9NAM0) DNA-directed RNA polymerase OS=Hypocrea... 434 e-119
Q5CPZ8_CRYPI (tr|Q5CPZ8) DNA-directed RNA polymerase OS=Cryptosp... 433 e-119
B6VBN7_CAEBE (tr|B6VBN7) DNA-directed RNA polymerase OS=Caenorha... 432 e-118
E9E6X9_METAQ (tr|E9E6X9) DNA-directed RNA polymerase OS=Metarhiz... 432 e-118
M1W9W6_CLAPU (tr|M1W9W6) DNA-directed RNA polymerase OS=Clavicep... 431 e-118
E9EPZ1_METAR (tr|E9EPZ1) DNA-directed RNA polymerase OS=Metarhiz... 431 e-118
M7WCZ0_ENTHI (tr|M7WCZ0) DNA directed RNA polymerase III subunit... 429 e-118
M2REN2_ENTHI (tr|M2REN2) DNA-directed RNA polymerase OS=Entamoeb... 429 e-118
G2RHZ1_THITE (tr|G2RHZ1) DNA-directed RNA polymerase OS=Thielavi... 429 e-118
N9V9N8_ENTHI (tr|N9V9N8) DNA-directed RNA polymerase III subunit... 429 e-117
K2I0A2_ENTNP (tr|K2I0A2) DNA-directed RNA polymerase OS=Entamoeb... 429 e-117
M3TVF4_ENTHI (tr|M3TVF4) DNA-directed RNA polymerase OS=Entamoeb... 429 e-117
C4M3E3_ENTHI (tr|C4M3E3) DNA-directed RNA polymerase OS=Entamoeb... 429 e-117
K2SSG0_MACPH (tr|K2SSG0) DNA-directed RNA polymerase OS=Macropho... 429 e-117
C5KAB2_PERM5 (tr|C5KAB2) DNA-directed RNA polymerase OS=Perkinsu... 428 e-117
G2QQ31_THIHA (tr|G2QQ31) DNA-directed RNA polymerase OS=Thielavi... 428 e-117
E5S005_TRISP (tr|E5S005) DNA-directed RNA polymerase OS=Trichine... 427 e-117
J9MD51_FUSO4 (tr|J9MD51) DNA-directed RNA polymerase OS=Fusarium... 427 e-117
N4TUJ3_FUSOX (tr|N4TUJ3) DNA-directed RNA polymerase III subunit... 427 e-117
N1RHG8_FUSOX (tr|N1RHG8) DNA-directed RNA polymerase III subunit... 427 e-117
F7VPM2_SORMK (tr|F7VPM2) DNA-directed RNA polymerase OS=Sordaria... 427 e-117
F9FPR8_FUSOF (tr|F9FPR8) DNA-directed RNA polymerase OS=Fusarium... 427 e-117
K3V8C3_FUSPC (tr|K3V8C3) DNA-directed RNA polymerase OS=Fusarium... 427 e-117
G0RZ86_CHATD (tr|G0RZ86) DNA-directed RNA polymerase OS=Chaetomi... 427 e-117
I1RBC7_GIBZE (tr|I1RBC7) DNA-directed RNA polymerase OS=Gibberel... 427 e-117
Q9P6E7_NEUCS (tr|Q9P6E7) DNA-directed RNA polymerase OS=Neurospo... 426 e-117
Q1K5Q5_NEUCR (tr|Q1K5Q5) DNA-directed RNA polymerase OS=Neurospo... 426 e-117
G4USJ4_NEUT9 (tr|G4USJ4) DNA-directed RNA polymerase OS=Neurospo... 426 e-117
F8MQD2_NEUT8 (tr|F8MQD2) DNA-directed RNA polymerase OS=Neurospo... 426 e-117
R1GAK2_9PEZI (tr|R1GAK2) Putative dna-directed rna polymerase ii... 426 e-117
R8BL56_9PEZI (tr|R8BL56) Putative dna-directed rna polymerase ii... 426 e-117
B0EDI3_ENTDS (tr|B0EDI3) DNA-directed RNA polymerase OS=Entamoeb... 426 e-116
L7IZL9_MAGOR (tr|L7IZL9) DNA-directed RNA polymerase OS=Magnapor... 426 e-116
L7I1K3_MAGOR (tr|L7I1K3) DNA-directed RNA polymerase OS=Magnapor... 426 e-116
G4MNW6_MAGO7 (tr|G4MNW6) DNA-directed RNA polymerase OS=Magnapor... 426 e-116
M7T5I9_9PEZI (tr|M7T5I9) Putative dna-directed rna polymerase ii... 426 e-116
N6TK73_9CUCU (tr|N6TK73) Uncharacterized protein (Fragment) OS=D... 425 e-116
Q2GW04_CHAGB (tr|Q2GW04) DNA-directed RNA polymerase OS=Chaetomi... 422 e-115
H3F846_PRIPA (tr|H3F846) Uncharacterized protein OS=Pristionchus... 422 e-115
B6AC47_CRYMR (tr|B6AC47) DNA-directed RNA polymerase OS=Cryptosp... 421 e-115
E2BN08_HARSA (tr|E2BN08) DNA-directed RNA polymerase OS=Harpegna... 421 e-115
C7YHY2_NECH7 (tr|C7YHY2) DNA-directed RNA polymerase OS=Nectria ... 419 e-114
E2AHW0_CAMFO (tr|E2AHW0) DNA-directed RNA polymerase OS=Camponot... 416 e-113
F0XA62_GROCL (tr|F0XA62) DNA-directed RNA polymerase OS=Grosmann... 416 e-113
M4FJC1_MAGP6 (tr|M4FJC1) DNA-directed RNA polymerase OS=Magnapor... 414 e-113
D8M9S0_BLAHO (tr|D8M9S0) DNA-directed RNA polymerase OS=Blastocy... 412 e-112
J3PB66_GAGT3 (tr|J3PB66) DNA-directed RNA polymerase OS=Gaeumann... 410 e-112
Q5NVB0_PONAB (tr|Q5NVB0) Putative uncharacterized protein DKFZp4... 410 e-112
M1VFL8_CYAME (tr|M1VFL8) RNA polymerase III second largest subun... 409 e-111
J9K0J8_ACYPI (tr|J9K0J8) DNA-directed RNA polymerase OS=Acyrthos... 408 e-111
E0VD47_PEDHC (tr|E0VD47) DNA-directed RNA polymerase OS=Pediculu... 400 e-109
K1VE20_TRIAC (tr|K1VE20) DNA-directed RNA polymerase OS=Trichosp... 400 e-109
G0UIQ4_TRYCI (tr|G0UIQ4) DNA-directed RNA polymerase OS=Trypanos... 398 e-108
R1EAI0_EMIHU (tr|R1EAI0) Uncharacterized protein OS=Emiliania hu... 397 e-108
I7IG96_BABMI (tr|I7IG96) DNA-directed RNA polymerase OS=Babesia ... 397 e-108
Q8SQY8_ENCCU (tr|Q8SQY8) DNA-directed RNA polymerase OS=Encephal... 397 e-108
N1JKT6_ERYGR (tr|N1JKT6) DNA-directed RNA polymerase III OS=Blum... 396 e-107
I6URP7_ENCHA (tr|I6URP7) DNA-directed RNA polymerase OS=Encephal... 394 e-107
R1DXI2_EMIHU (tr|R1DXI2) Uncharacterized protein OS=Emiliania hu... 394 e-107
M5X5L8_PRUPE (tr|M5X5L8) Uncharacterized protein (Fragment) OS=P... 394 e-107
E0SA96_ENCIT (tr|E0SA96) DNA-directed RNA polymerase OS=Encephal... 394 e-107
M1JHJ4_ENCCN (tr|M1JHJ4) DNA-directed RNA polymerase OS=Encephal... 393 e-106
Q6E6F3_ANTLO (tr|Q6E6F3) DNA-directed RNA polymerase OS=Antonosp... 392 e-106
Q236N3_TETTS (tr|Q236N3) DNA-directed RNA polymerase OS=Tetrahym... 389 e-105
Q4GZE8_TRYB2 (tr|Q4GZE8) DNA-directed RNA polymerase OS=Trypanos... 388 e-105
C9ZHX4_TRYB9 (tr|C9ZHX4) DNA-directed RNA polymerase OS=Trypanos... 388 e-105
A7AM79_BABBO (tr|A7AM79) DNA-directed RNA polymerase, beta subun... 388 e-105
I6ZL04_ENCRO (tr|I6ZL04) DNA-directed RNA polymerase OS=Encephal... 387 e-105
G0QJ09_ICHMG (tr|G0QJ09) DNA-directed polymerase III polypeptide... 386 e-105
K2NN02_TRYCR (tr|K2NN02) DNA-directed RNA polymerase OS=Trypanos... 386 e-104
K4DU07_TRYCR (tr|K4DU07) DNA-directed RNA polymerase OS=Trypanos... 384 e-104
Q4D9P5_TRYCC (tr|Q4D9P5) DNA-directed RNA polymerase OS=Trypanos... 384 e-104
E4Y8I9_OIKDI (tr|E4Y8I9) DNA-directed RNA polymerase OS=Oikopleu... 384 e-104
E4XT36_OIKDI (tr|E4XT36) DNA-directed RNA polymerase OS=Oikopleu... 384 e-104
B2B0Z1_PODAN (tr|B2B0Z1) DNA-directed RNA polymerase OS=Podospor... 383 e-103
E9AGT7_LEIIN (tr|E9AGT7) DNA-directed RNA polymerase OS=Leishman... 383 e-103
G0TQZ0_TRYVY (tr|G0TQZ0) DNA-directed RNA polymerase (Fragment) ... 382 e-103
A4HBG9_LEIBR (tr|A4HBG9) DNA-directed RNA polymerase OS=Leishman... 381 e-103
Q4YMS1_PLABA (tr|Q4YMS1) DNA-directed RNA polymerase III subunit... 380 e-103
E9AUE0_LEIMU (tr|E9AUE0) DNA-directed RNA polymerase OS=Leishman... 380 e-103
Q4QD43_LEIMA (tr|Q4QD43) DNA-directed RNA polymerase OS=Leishman... 380 e-103
Q4MYU5_THEPA (tr|Q4MYU5) DNA-directed RNA polymerase OS=Theileri... 379 e-102
B3LJN2_YEAS1 (tr|B3LJN2) DNA-directed RNA polymerase OS=Saccharo... 374 e-101
Q4UB41_THEAN (tr|Q4UB41) DNA-directed RNA polymerase OS=Theileri... 373 e-100
L1LCN0_BABEQ (tr|L1LCN0) DNA-directed RNA polymerase OS=Babesia ... 371 e-100
G7Y2X6_CLOSI (tr|G7Y2X6) DNA-directed RNA polymerase OS=Clonorch... 364 4e-98
K8FD01_9CHLO (tr|K8FD01) DNA-directed RNA polymerase OS=Bathycoc... 363 6e-98
G4VQP1_SCHMA (tr|G4VQP1) DNA-directed RNA polymerase OS=Schistos... 363 8e-98
G4VQP2_SCHMA (tr|G4VQP2) DNA-directed RNA polymerase OS=Schistos... 362 2e-97
Q4XDD3_PLACH (tr|Q4XDD3) DNA-directed RNA polymerase III subunit... 361 4e-97
F0ZBH6_DICPU (tr|F0ZBH6) DNA-directed RNA polymerase OS=Dictyost... 360 8e-97
J4D8M3_THEOR (tr|J4D8M3) DNA-directed RNA polymerase OS=Theileri... 358 3e-96
J9DAM6_EDHAE (tr|J9DAM6) Uncharacterized protein (Fragment) OS=E... 357 4e-96
R0KQ37_NOSBO (tr|R0KQ37) DNA-directed RNA polymerase III subunit... 354 3e-95
L2GJ72_VITCO (tr|L2GJ72) DNA-directed RNA polymerase OS=Vittafor... 353 9e-95
R0MLI9_NOSBO (tr|R0MLI9) DNA-directed RNA polymerase III subunit... 353 1e-94
B7XI25_ENTBH (tr|B7XI25) DNA-directed RNA polymerase OS=Enterocy... 348 3e-93
K1PAJ7_CRAGI (tr|K1PAJ7) DNA-directed RNA polymerase OS=Crassost... 346 9e-93
C4V6K7_NOSCE (tr|C4V6K7) DNA-directed RNA polymerase OS=Nosema c... 344 4e-92
B3KRQ8_HUMAN (tr|B3KRQ8) DNA-directed RNA polymerase OS=Homo sap... 343 1e-91
C0PUS9_SALSA (tr|C0PUS9) DNA-directed RNA polymerase (Fragment) ... 342 2e-91
J7G8V5_9CRYP (tr|J7G8V5) DNA-directed RNA polymerase OS=Chroomon... 341 3e-91
G3RKE6_GORGO (tr|G3RKE6) DNA-directed RNA polymerase OS=Gorilla ... 340 7e-91
A9BK45_HEMAN (tr|A9BK45) DNA-directed RNA polymerase OS=Hemiselm... 338 3e-90
A0D7M6_PARTE (tr|A0D7M6) DNA-directed RNA polymerase OS=Parameci... 328 2e-87
H8ZFE6_NEMS1 (tr|H8ZFE6) DNA-directed RNA polymerase OS=Nematoci... 328 3e-87
I3ELM9_NEMP1 (tr|I3ELM9) DNA-directed RNA polymerase OS=Nematoci... 322 2e-85
I3EEB3_NEMP3 (tr|I3EEB3) DNA-directed RNA polymerase OS=Nematoci... 322 2e-85
M7ZR09_TRIUA (tr|M7ZR09) DNA-directed RNA polymerase III subunit... 321 4e-85
F6ZVG1_CIOIN (tr|F6ZVG1) DNA-directed RNA polymerase OS=Ciona in... 312 2e-82
A2E3T5_TRIVA (tr|A2E3T5) DNA-directed RNA polymerase OS=Trichomo... 310 7e-82
G7L9X1_MEDTR (tr|G7L9X1) DNA-directed RNA polymerase OS=Medicago... 304 5e-80
H2Z7Q1_CIOSA (tr|H2Z7Q1) DNA-directed RNA polymerase (Fragment) ... 300 6e-79
H2Z7Q3_CIOSA (tr|H2Z7Q3) DNA-directed RNA polymerase (Fragment) ... 299 2e-78
H2Z7Q2_CIOSA (tr|H2Z7Q2) DNA-directed RNA polymerase (Fragment) ... 298 3e-78
M5X5T3_PRUPE (tr|M5X5T3) Uncharacterized protein OS=Prunus persi... 298 3e-78
Q98S96_GUITH (tr|Q98S96) DNA-directed RNA polymerase OS=Guillard... 298 3e-78
H2Z7Q4_CIOSA (tr|H2Z7Q4) DNA-directed RNA polymerase (Fragment) ... 296 1e-77
Q2N123_9METZ (tr|Q2N123) RNA polymerase III second largest subun... 291 4e-76
B3S5S8_TRIAD (tr|B3S5S8) DNA-directed RNA polymerase OS=Trichopl... 280 8e-73
F2HHJ6_9CRYP (tr|F2HHJ6) DNA-directed RNA polymerase OS=Cryptomo... 277 7e-72
G9KHT0_MUSPF (tr|G9KHT0) DNA-directed RNA polymerase (Fragment) ... 257 6e-66
I4YEC5_WALSC (tr|I4YEC5) DNA-directed RNA polymerase OS=Wallemia... 255 3e-65
M7NUD7_9ASCO (tr|M7NUD7) Uncharacterized protein OS=Pneumocystis... 254 6e-65
E9RHM5_9NEOP (tr|E9RHM5) DNA-directed RNA polymerase OS=Stenopsy... 253 1e-64
B4K015_DROGR (tr|B4K015) DNA-directed RNA polymerase OS=Drosophi... 252 2e-64
E9RHK4_9NEOP (tr|E9RHK4) DNA-directed RNA polymerase OS=Forficul... 252 3e-64
E9RHJ3_9INSE (tr|E9RHJ3) DNA-directed RNA polymerase OS=Ephemera... 252 3e-64
B4KDW5_DROMO (tr|B4KDW5) DNA-directed RNA polymerase OS=Drosophi... 252 3e-64
B4M040_DROVI (tr|B4M040) DNA-directed RNA polymerase OS=Drosophi... 252 3e-64
E9RHI9_9INSE (tr|E9RHI9) DNA-directed RNA polymerase OS=Thermobi... 251 4e-64
J9K837_ACYPI (tr|J9K837) DNA-directed RNA polymerase OS=Acyrthos... 251 4e-64
E9RHL4_9HEMI (tr|E9RHL4) DNA-directed RNA polymerase OS=Uroleuco... 251 4e-64
B4N9I3_DROWI (tr|B4N9I3) DNA-directed RNA polymerase OS=Drosophi... 251 4e-64
Q298X6_DROPS (tr|Q298X6) DNA-directed RNA polymerase OS=Drosophi... 251 4e-64
B4G4U0_DROPE (tr|B4G4U0) DNA-directed RNA polymerase OS=Drosophi... 251 4e-64
B4PTC0_DROYA (tr|B4PTC0) DNA-directed RNA polymerase OS=Drosophi... 251 4e-64
B3P0M0_DROER (tr|B3P0M0) DNA-directed RNA polymerase OS=Drosophi... 251 4e-64
B4HF52_DROSE (tr|B4HF52) DNA-directed RNA polymerase OS=Drosophi... 251 4e-64
B4R0H5_DROSI (tr|B4R0H5) DNA-directed RNA polymerase OS=Drosophi... 251 4e-64
I1GQ05_BRADI (tr|I1GQ05) DNA-directed RNA polymerase OS=Brachypo... 251 5e-64
R9AC13_WALIC (tr|R9AC13) DNA-directed RNA polymerase II subunit ... 251 5e-64
B3LYR3_DROAN (tr|B3LYR3) DNA-directed RNA polymerase OS=Drosophi... 251 5e-64
I1L1L2_SOYBN (tr|I1L1L2) DNA-directed RNA polymerase OS=Glycine ... 251 5e-64
K4A4Z6_SETIT (tr|K4A4Z6) DNA-directed RNA polymerase OS=Setaria ... 251 5e-64
E9RHK0_9ORTH (tr|E9RHK0) DNA-directed RNA polymerase OS=Euconoce... 251 5e-64
E9RHJ0_9INSE (tr|E9RHJ0) DNA-directed RNA polymerase OS=Isolepis... 251 6e-64
L8HA21_ACACA (tr|L8HA21) DNA-directed RNA polymerase OS=Acantham... 251 7e-64
J9E9C4_AEDAE (tr|J9E9C4) DNA-directed RNA polymerase OS=Aedes ae... 250 8e-64
E9RHM3_9COLE (tr|E9RHM3) DNA-directed RNA polymerase OS=Lucidina... 250 8e-64
E9RHK6_TENAI (tr|E9RHK6) DNA-directed RNA polymerase OS=Tenodera... 250 1e-63
B9FA12_ORYSJ (tr|B9FA12) DNA-directed RNA polymerase OS=Oryza sa... 250 1e-63
E9RHM2_9DYTI (tr|E9RHM2) DNA-directed RNA polymerase OS=Eretes s... 250 1e-63
E9RHL9_9NEOP (tr|E9RHL9) DNA-directed RNA polymerase OS=Inocelli... 250 1e-63
E9RHJ6_9NEOP (tr|E9RHJ6) DNA-directed RNA polymerase (Fragment) ... 250 1e-63
D6WZU5_TRICA (tr|D6WZU5) DNA-directed RNA polymerase OS=Triboliu... 250 1e-63
Q1WMR3_COPDI (tr|Q1WMR3) DNA-directed RNA polymerase OS=Coprinel... 249 1e-63
J3LR54_ORYBR (tr|J3LR54) DNA-directed RNA polymerase OS=Oryza br... 249 1e-63
Q10G20_ORYSJ (tr|Q10G20) DNA-directed RNA polymerase OS=Oryza sa... 249 1e-63
I1PDW7_ORYGL (tr|I1PDW7) DNA-directed RNA polymerase OS=Oryza gl... 249 1e-63
A2XK42_ORYSI (tr|A2XK42) DNA-directed RNA polymerase OS=Oryza sa... 249 1e-63
Q7QAK7_ANOGA (tr|Q7QAK7) DNA-directed RNA polymerase OS=Anophele... 249 1e-63
E9RHJ1_9ODON (tr|E9RHJ1) DNA-directed RNA polymerase OS=Epiophle... 249 1e-63
E9RHJ2_9ODON (tr|E9RHJ2) DNA-directed RNA polymerase OS=Mnais pr... 249 2e-63
E9RHK5_9NEOP (tr|E9RHK5) DNA-directed RNA polymerase OS=Zorotypu... 249 2e-63
E9RHL1_9HEMI (tr|E9RHL1) DNA-directed RNA polymerase OS=Cryptoty... 249 2e-63
G9FIK7_LENED (tr|G9FIK7) DNA-directed RNA polymerase OS=Lentinul... 249 2e-63
E9RHJ5_9NEOP (tr|E9RHJ5) DNA-directed RNA polymerase (Fragment) ... 249 2e-63
H2Y4I6_CIOSA (tr|H2Y4I6) DNA-directed RNA polymerase (Fragment) ... 249 2e-63
E9RHL0_9NEOP (tr|E9RHL0) DNA-directed RNA polymerase (Fragment) ... 249 2e-63
E9RHL2_9HEMI (tr|E9RHL2) DNA-directed RNA polymerase OS=Anacanth... 249 2e-63
G6D0F9_DANPL (tr|G6D0F9) DNA-directed RNA polymerase OS=Danaus p... 249 2e-63
E9RHM4_PAPPL (tr|E9RHM4) DNA-directed RNA polymerase OS=Papilio ... 249 2e-63
B6K5Q5_SCHJY (tr|B6K5Q5) DNA-directed RNA polymerase OS=Schizosa... 249 3e-63
E3WSY6_ANODA (tr|E3WSY6) DNA-directed RNA polymerase OS=Anophele... 249 3e-63
I1F4T1_AMPQE (tr|I1F4T1) DNA-directed RNA polymerase OS=Amphimed... 248 3e-63
E9RHJ8_KARBI (tr|E9RHJ8) DNA-directed RNA polymerase OS=Karoopha... 248 3e-63
>K7L1D4_SOYBN (tr|K7L1D4) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 1048
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/486 (78%), Positives = 413/486 (84%), Gaps = 3/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRSC CVL+ +DEAELAKLGECPLDPGGYFVIKG EKVILIQEQLSKNRIII DK
Sbjct: 159 MPIMLRSCCCVLHGRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDTDK 218
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
NI +VMEKEK+WL+LN+F K+VPLMVVMKAMGMESDQEV QMV
Sbjct: 219 KGNITASVTSSTEKIKTKTVVVMEKEKLWLQLNKFPKKVPLMVVMKAMGMESDQEVTQMV 278
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRYS LLLPS EEC + VYT+EQAL +LD VKR +SN ++EKEG A L
Sbjct: 279 GRDPRYSFLLLPSIEECTKCKVYTREQALEYLDKLVKRPTYSNNAAEKEG---AAFSALR 335
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ FL+N+PV Q NFR KCIY AVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF
Sbjct: 336 DVFLANVPVDQDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 395
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK+M +V+N +DK+L+KPDKA FDI ++L R + +IT GLE TLSTGNFEI+RFR
Sbjct: 396 EDLFKSMTTEVKNLTDKMLEKPDKAKNFDICTLLTRTRSIITLGLERTLSTGNFEIKRFR 455
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
MERKGMTQVLQRLSFIG LG MTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE+C
Sbjct: 456 MERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGESC 515
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTHVTTDEEE PLISLC LGVEDM+ LS EELHTPDSFLVIFNGLILGKHR
Sbjct: 516 GLVKNLALMTHVTTDEEEKPLISLCESLGVEDMKDLSAEELHTPDSFLVIFNGLILGKHR 575
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
RP F TA+RKLRRAGKIGEFVSVYVNEKQ CVYLASDGGRVCRPLVIAD GISRIK++H
Sbjct: 576 RPLHFATAIRKLRRAGKIGEFVSVYVNEKQHCVYLASDGGRVCRPLVIADKGISRIKQHH 635
Query: 481 MKELMD 486
MKELMD
Sbjct: 636 MKELMD 641
>K7L1D3_SOYBN (tr|K7L1D3) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 1165
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/486 (78%), Positives = 413/486 (84%), Gaps = 3/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRSC CVL+ +DEAELAKLGECPLDPGGYFVIKG EKVILIQEQLSKNRIII DK
Sbjct: 159 MPIMLRSCCCVLHGRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDTDK 218
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
NI +VMEKEK+WL+LN+F K+VPLMVVMKAMGMESDQEV QMV
Sbjct: 219 KGNITASVTSSTEKIKTKTVVVMEKEKLWLQLNKFPKKVPLMVVMKAMGMESDQEVTQMV 278
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRYS LLLPS EEC + VYT+EQAL +LD VKR +SN ++EKEG A L
Sbjct: 279 GRDPRYSFLLLPSIEECTKCKVYTREQALEYLDKLVKRPTYSNNAAEKEG---AAFSALR 335
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ FL+N+PV Q NFR KCIY AVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF
Sbjct: 336 DVFLANVPVDQDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 395
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK+M +V+N +DK+L+KPDKA FDI ++L R + +IT GLE TLSTGNFEI+RFR
Sbjct: 396 EDLFKSMTTEVKNLTDKMLEKPDKAKNFDICTLLTRTRSIITLGLERTLSTGNFEIKRFR 455
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
MERKGMTQVLQRLSFIG LG MTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE+C
Sbjct: 456 MERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGESC 515
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTHVTTDEEE PLISLC LGVEDM+ LS EELHTPDSFLVIFNGLILGKHR
Sbjct: 516 GLVKNLALMTHVTTDEEEKPLISLCESLGVEDMKDLSAEELHTPDSFLVIFNGLILGKHR 575
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
RP F TA+RKLRRAGKIGEFVSVYVNEKQ CVYLASDGGRVCRPLVIAD GISRIK++H
Sbjct: 576 RPLHFATAIRKLRRAGKIGEFVSVYVNEKQHCVYLASDGGRVCRPLVIADKGISRIKQHH 635
Query: 481 MKELMD 486
MKELMD
Sbjct: 636 MKELMD 641
>K7K145_SOYBN (tr|K7K145) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 1166
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/486 (77%), Positives = 409/486 (84%), Gaps = 3/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRSC CVL+ KDEAELAKLGECPLDPGGYFVIKG EKVILIQEQLSKNRIII DK
Sbjct: 160 MPIMLRSCCCVLHGKDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDTDK 219
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
NI IVME EK+WL+LN+F K+VPLMVVMKAMGMESDQEV+QMV
Sbjct: 220 KGNITASVTSSTEKIKTKTVIVMENEKLWLQLNKFPKKVPLMVVMKAMGMESDQEVIQMV 279
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRYS LLLPS EEC + VYT+EQAL +LD VKR +S+ S+EKEG A L
Sbjct: 280 GRDPRYSFLLLPSIEECRKCKVYTKEQALEYLDKLVKRPTYSSNSAEKEG---AAFSALR 336
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ FL+N+PV Q NF+ KCIY AVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF
Sbjct: 337 DVFLANVPVDQDNFQKKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 396
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK+M +V+N +DK+LDKPDKA FDI ++L R + +IT GLE TLSTGNFEI+RFR
Sbjct: 397 EDLFKSMTTEVKNLTDKMLDKPDKAKNFDICTLLTRTRSIITLGLERTLSTGNFEIKRFR 456
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
MERKGMTQVLQRLSFIG LG MTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE+C
Sbjct: 457 MERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGESC 516
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTHVTTDEEE PLISL Y L V +E+L EELHTPDSFLVIFNGLILGKHR
Sbjct: 517 GLVKNLALMTHVTTDEEEKPLISLFYSLDVARIEHLFAEELHTPDSFLVIFNGLILGKHR 576
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
RP F T +RKLRRAG+IGEFVSVYVNEKQ CVYLASDGGRVCRPLVIAD GISRIK++H
Sbjct: 577 RPLHFATRIRKLRRAGEIGEFVSVYVNEKQHCVYLASDGGRVCRPLVIADKGISRIKQHH 636
Query: 481 MKELMD 486
MKELMD
Sbjct: 637 MKELMD 642
>B9IDF9_POPTR (tr|B9IDF9) DNA-directed RNA polymerase (Fragment) OS=Populus
trichocarpa GN=POPTRDRAFT_900808 PE=3 SV=1
Length = 1141
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/486 (73%), Positives = 414/486 (85%), Gaps = 5/486 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRSC CVLY K+EAELA+LGECPLDPGGYFV+KG EKVILIQEQLSKNRIII DK
Sbjct: 133 MPIMLRSCCCVLYGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDNDK 192
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
NI I+MEKEKM+L LN+FAK++P+MVVMKAMGMESDQEVVQMV
Sbjct: 193 KGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMGMESDQEVVQMV 252
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRYS LLLPS EECA +GVYTQ+QAL +L++ VKRS +S+ S+EKE R AL +L
Sbjct: 253 GRDPRYSALLLPSIEECASHGVYTQQQALEYLEAMVKRSTYSSSSTEKENR---ALAILR 309
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ F++N+PV + NFR KCIY AVM+RR+M+A+LNKDAMDDKDYVGNKRLELSGQLISLLF
Sbjct: 310 DVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSGQLISLLF 369
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FKTM +V+ ++D LL K ++++RFD S + R D IT+GLE LSTGN++++RFR
Sbjct: 370 EDLFKTMITEVQKTADTLLVKQNRSSRFDFSQYIVR--DSITNGLERALSTGNWDVKRFR 427
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M RKG+TQVL RLS++ LG MTR+SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC
Sbjct: 428 MNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 487
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTHVTTDEEE+PLISLC LGVED+E LSGEELHTP+SFLVIFNGLILGKHR
Sbjct: 488 GLVKNLALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELHTPNSFLVIFNGLILGKHR 547
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
RP+ F AMRKLRRAGKIGEFVSV+VNEKQ VY+ASDGGRVCRPLVIAD G+SRIKE+H
Sbjct: 548 RPQQFANAMRKLRRAGKIGEFVSVFVNEKQRAVYIASDGGRVCRPLVIADKGVSRIKEHH 607
Query: 481 MKELMD 486
M+ELMD
Sbjct: 608 MRELMD 613
>F6HVA5_VITVI (tr|F6HVA5) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_13s0084g00170 PE=3 SV=1
Length = 753
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/516 (69%), Positives = 412/516 (79%), Gaps = 35/516 (6%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRSC CVLY+KDEAELA+LGECPLDPGGYFV+KG EKVILIQEQLSKNRIII DK
Sbjct: 152 MPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDTDK 211
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
NI IVMEKEK+WL+LN+F ++P+M+VMKAMGMESDQEVVQMV
Sbjct: 212 KGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAMGMESDQEVVQMV 271
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKV-----------KRSMFSNISSEKE 169
GR+PRYS LLLPS EECA +G+YTQ+QAL L+ KV K+ F N S EKE
Sbjct: 272 GRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVVYIEDHTLFLVKKLPFYNPSLEKE 331
Query: 170 GRGSPALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRL 229
GRG + +L + F++N+PV Q NFR KC+Y AVM+RR+MDAILNKDAMDDKDYVGNKRL
Sbjct: 332 GRG---MAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRL 388
Query: 230 ELSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTL 289
ELSGQLISLLFED FKTM +V+ + D +L KP +++RFD S + R D IT GLE TL
Sbjct: 389 ELSGQLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQFIVR--DSITVGLERTL 446
Query: 290 STGNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGML 349
STGN++++RFRM RKGM+QV+ RLS+IG LG MT++SPQFEKSRKVSGPRALQPSQWGML
Sbjct: 447 STGNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGML 506
Query: 350 CPCDTPEGEACGLVKNLALMTHVTTDEEEAPLISL-------------------CYYLGV 390
CPCDTPEGEACGLVKNLALMTHVTTDEEE+PLISL CY LGV
Sbjct: 507 CPCDTPEGEACGLVKNLALMTHVTTDEEESPLISLVSLFLSNVYLMFGNHRAMSCYSLGV 566
Query: 391 EDMEYLSGEELHTPDSFLVIFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQ 450
ED+E LSGEELHTP+SFL+IFNGLILGKHRRP+ F A+RKLRRAGKIGEFVSV+VNEKQ
Sbjct: 567 EDLELLSGEELHTPNSFLIIFNGLILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQ 626
Query: 451 GCVYLASDGGRVCRPLVIADNGISRIKEYHMKELMD 486
CVY+ASDGGRVCRP+VIAD G SRIKE+HMKEL+D
Sbjct: 627 HCVYIASDGGRVCRPVVIADKGKSRIKEHHMKELID 662
>B9SHS2_RICCO (tr|B9SHS2) DNA-directed RNA polymerase OS=Ricinus communis
GN=RCOM_0620590 PE=3 SV=1
Length = 1139
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/486 (72%), Positives = 399/486 (82%), Gaps = 18/486 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVLY KDEAELA+LGECPLDPGGYFVIKG EKVILIQEQLSKNRIII DK
Sbjct: 150 MPIMLRSRSCVLYGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDTDK 209
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
NI I MEKEKM+L LN+F K++P+MVV+KAMGMESDQEVVQMV
Sbjct: 210 KGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFVKKIPIMVVIKAMGMESDQEVVQMV 269
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRYS LLLPS EECA +YTQ++AL +LD K R AL +L
Sbjct: 270 GRDPRYSALLLPSIEECAGLSIYTQQKALEYLDGKENR----------------ALTILR 313
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ FL+N+PVH+ NFR KC+Y AVM+RR+M+A+LNKDAMDDKDYVGNKRLELSGQLISLLF
Sbjct: 314 DVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKRLELSGQLISLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FKTM +V+ + D +L K ++++RFD++ + R D IT+GLE TLSTGNF+++RF+
Sbjct: 374 EDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVR--DNITNGLERTLSTGNFDVKRFK 431
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M RKGMTQVL RLS+I LG MTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC
Sbjct: 432 MHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 491
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTHVTTD+EE PLISLCY LGVED+E LSGEELHTP+SFLVIFNGLILGKHR
Sbjct: 492 GLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELLSGEELHTPNSFLVIFNGLILGKHR 551
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
RP+ FV +MRKLRRAGKIGEFVSV+VNEKQ VYLASDGGRVCRPLVIAD G+SRIKE+H
Sbjct: 552 RPQYFVNSMRKLRRAGKIGEFVSVFVNEKQRAVYLASDGGRVCRPLVIADRGVSRIKEHH 611
Query: 481 MKELMD 486
MKEL D
Sbjct: 612 MKELRD 617
>D7MKV2_ARALL (tr|D7MKV2) DNA-directed RNA polymerase OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_917015 PE=3 SV=1
Length = 1165
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/488 (68%), Positives = 396/488 (81%), Gaps = 6/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRSCRCVL+ KDE ELA+LGECPLDPGGYFVIKG EKV+LIQEQLSKNRIII DK
Sbjct: 145 MPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLIQEQLSKNRIIIDSDK 204
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
NI I MEKEK++L L++F K++P+++V+KAMGMESDQE+VQMV
Sbjct: 205 KGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHQFVKKIPIVIVLKAMGMESDQEIVQMV 264
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPR+S LLPS EEC GV TQ+QAL +L++KVK++ + EK+GR AL +L
Sbjct: 265 GRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKTSYGP-PPEKDGR---ALYILR 320
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ FL+++PV NFR KC Y VM+RR+++A+LNKD+MDDKDYVGNKRLELSGQL+SLLF
Sbjct: 321 DLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDSMDDKDYVGNKRLELSGQLMSLLF 380
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLAR--HQDLITHGLESTLSTGNFEIRR 298
ED FKTM + D +L KP +A+RFD S L Q+ I+ GLE TLSTGNF+I+R
Sbjct: 381 EDLFKTMLSEAIKKVDAILSKPSRASRFDFSQYLTTGDSQNTISVGLERTLSTGNFDIKR 440
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRM RKGMTQVL RLSFIG LG +T++SPQFEKSRKVSGPR+LQPSQWGMLCPCDTPEGE
Sbjct: 441 FRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDTPEGE 500
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
+CGLVKNLALMTHVTTDEEE PL+++CY LGV D+E LS EELHTPDSFLVI NGLILGK
Sbjct: 501 SCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVILNGLILGK 560
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
HRRP+ F ++R+LRRAGKIGEFVSV+ NEKQ CVY+ASDGGRVCRPLVIAD GISR+K+
Sbjct: 561 HRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDGGRVCRPLVIADKGISRVKQ 620
Query: 479 YHMKELMD 486
+HMKEL D
Sbjct: 621 HHMKELQD 628
>M1ATE0_SOLTU (tr|M1ATE0) DNA-directed RNA polymerase OS=Solanum tuberosum
GN=PGSC0003DMG400011444 PE=3 SV=1
Length = 1153
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/486 (69%), Positives = 394/486 (81%), Gaps = 3/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVLY KDE ELA+LGECPLDPGGYFVIKG EKVILIQEQLSKNRIII DK
Sbjct: 146 MPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDTDK 205
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
++ I MEKEK++L+LN F +VP+MVVMKAMGMESDQEVVQM+
Sbjct: 206 KGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTKVPIMVVMKAMGMESDQEVVQMI 265
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPR+S LLLPS EECA +YTQ QAL L+S M S + E +G+ AL +L
Sbjct: 266 GRDPRFSALLLPSIEECADLKLYTQHQALEFLESDKMLKMPSYSTGPVE-KGARALSILR 324
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ FL+N+PVHQ NFR KCIY AVMMRR+M+AILNKDAMDDKDYVGNKRLELSGQL+SLLF
Sbjct: 325 DIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMDDKDYVGNKRLELSGQLLSLLF 384
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FKTM ++ R + D LL +P +++R DIS + + D IT GLE TLSTGN++++RFR
Sbjct: 385 EDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIVK--DSITMGLERTLSTGNWDVKRFR 442
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M RKGMTQV+ RLS+IG LG MT++SPQFEKSRKVSGPRALQPSQ+GMLCPCDTPEGEAC
Sbjct: 443 MHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQFGMLCPCDTPEGEAC 502
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTHVTTDE+E P++SLCY LGVED+E LS EELH P S+L+ NGLILGKH+
Sbjct: 503 GLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEELHMPTSYLITLNGLILGKHK 562
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
P+ F AMR+LRRAGKIGEFVS++VNEKQ CVY+ASDGGRVCRPLVIAD G+SRIKE+H
Sbjct: 563 SPQRFANAMRRLRRAGKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVSRIKEHH 622
Query: 481 MKELMD 486
M+EL D
Sbjct: 623 MRELRD 628
>K4D2C7_SOLLC (tr|K4D2C7) DNA-directed RNA polymerase OS=Solanum lycopersicum
GN=Solyc10g078860.1 PE=3 SV=1
Length = 1153
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/486 (69%), Positives = 395/486 (81%), Gaps = 3/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVLY KDE ELA+LGECPLDPGGYFVIKG EKVILIQEQLSKNRIII DK
Sbjct: 146 MPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDTDK 205
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
++ I MEKEK++L+LN F +VP+MVVMKAMGMESDQEVVQM+
Sbjct: 206 KGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTKVPIMVVMKAMGMESDQEVVQMI 265
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPR+S LLLPS EECA +YTQ+QAL L+S M S + E +G+ AL +L
Sbjct: 266 GRDPRFSALLLPSIEECADLKLYTQQQALEFLESDKMLKMPSYSTGPIE-KGARALSILR 324
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ FL+N+PVHQ NFR KCIY AVMMRR+M+AILNKDAMDDKDYVGNKRLELSGQL+SLLF
Sbjct: 325 DIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMDDKDYVGNKRLELSGQLLSLLF 384
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FKTM ++ R + D LL +P +++R DIS + + D IT GLE TLSTGN++++RFR
Sbjct: 385 EDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIIK--DSITMGLERTLSTGNWDVKRFR 442
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M RKGMTQV+ RLS+IG LG MT++SPQFEKSRKVSGPRALQPSQ+GMLCPCDTPEGEAC
Sbjct: 443 MHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQFGMLCPCDTPEGEAC 502
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTHVTTDE+E P++SLCY LGVED+E LS EELH P S+L+ NGLILGKH+
Sbjct: 503 GLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEELHMPTSYLITLNGLILGKHK 562
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
P+ F AMR+LRRAGK+GEFVS++VNEKQ CVY+ASDGGRVCRPLVIAD G+SRIKE+H
Sbjct: 563 SPQRFANAMRRLRRAGKVGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGVSRIKEHH 622
Query: 481 MKELMD 486
M+EL D
Sbjct: 623 MRELRD 628
>R0GKI2_9BRAS (tr|R0GKI2) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10025768mg PE=4 SV=1
Length = 1160
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/486 (68%), Positives = 396/486 (81%), Gaps = 6/486 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRSCRCVL KDE ELA+LGECPLDPGGYFVIKG EKV+LIQEQLSKNRIII DK
Sbjct: 145 MPIMLRSCRCVLNGKDEDELARLGECPLDPGGYFVIKGTEKVLLIQEQLSKNRIIIDSDK 204
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
NI I MEKE+++L L++F K++P+++V+KAMGMESDQE+VQMV
Sbjct: 205 KGNINASVTSSTEMTKSKTVIQMEKERIYLFLHQFVKKIPIIIVLKAMGMESDQEIVQMV 264
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPR+S LLPS EEC GV TQ+QAL +L++KVK++ + +K+GR AL +L
Sbjct: 265 GRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKTSYGP-PLQKDGR---ALYILR 320
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ FL+++PV NFR KC Y VM+RR+++A+LNKDAMDDKDYVGNKRLELSGQLISLLF
Sbjct: 321 DLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQLISLLF 380
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FKTM + D +L K ++A+RFD S L+ D+I+ GLE TLSTGNF+I+RFR
Sbjct: 381 EDLFKTMITEAIKKVDVILTKQNRASRFDFSQCLS--GDIISLGLERTLSTGNFDIKRFR 438
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M RKGMTQVL RLSFIG LG +T++SPQFEKSRKVSGPR+LQPSQWGMLCPCDTPEGE+C
Sbjct: 439 MHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDTPEGESC 498
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTHVTTDEEE PL+++CY LGV D+E LS EELHTPDSFLVI NGLILGKHR
Sbjct: 499 GLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVILNGLILGKHR 558
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
RP+ F ++R+LRRAGKIGEFVSV+ NEKQ CVY+ASDGGRVCRPLVIAD GISR+K++H
Sbjct: 559 RPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDGGRVCRPLVIADKGISRVKQHH 618
Query: 481 MKELMD 486
MKEL D
Sbjct: 619 MKELQD 624
>Q9FKF1_ARATH (tr|Q9FKF1) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=At5g45140 PE=3 SV=1
Length = 1194
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/487 (68%), Positives = 394/487 (80%), Gaps = 5/487 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRSCRCVL+ KDE ELA+LGECPLDPGGYF+IKG EKV+LIQEQLSKNRIII DK
Sbjct: 166 MPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNRIIIDSDK 225
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
NI I MEKEK++L L+RF K++P+++V+KAMGMESDQE+VQMV
Sbjct: 226 KGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHRFVKKIPIIIVLKAMGMESDQEIVQMV 285
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPR+S LLPS EEC GV TQ+QAL +L++KVK+ + EK+GR AL +L
Sbjct: 286 GRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKISYGT-PPEKDGR---ALSILR 341
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ FL+++PV NFR KC Y VM+RR+++A+LNKDAMDDKDYVGNKRLELSGQLISLLF
Sbjct: 342 DLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQLISLLF 401
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDL-ITHGLESTLSTGNFEIRRF 299
ED FKTM + + D +L+KP +A+RFD S L + I+ GLE TLSTGNF+I+RF
Sbjct: 402 EDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERTLSTGNFDIKRF 461
Query: 300 RMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEA 359
RM RKGMTQVL RLSFIG +G +T++SPQFEKSRKVSGPR+LQPSQWGMLCPCDTPEGE+
Sbjct: 462 RMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDTPEGES 521
Query: 360 CGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKH 419
CGLVKNLALMTHVTTDEEE PL+++CY LGV D+E LS EELHTPDSFLVI NGLILGKH
Sbjct: 522 CGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVILNGLILGKH 581
Query: 420 RRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEY 479
RP+ F ++R+LRRAGKIGEFVSV+ NEKQ CVY+ASD GRVCRPLVIAD GISR+K++
Sbjct: 582 SRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDVGRVCRPLVIADKGISRVKQH 641
Query: 480 HMKELMD 486
HMKEL D
Sbjct: 642 HMKELQD 648
>F4KD38_ARATH (tr|F4KD38) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=NRPC2 PE=3 SV=1
Length = 1161
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/487 (68%), Positives = 394/487 (80%), Gaps = 5/487 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRSCRCVL+ KDE ELA+LGECPLDPGGYF+IKG EKV+LIQEQLSKNRIII DK
Sbjct: 145 MPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNRIIIDSDK 204
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
NI I MEKEK++L L+RF K++P+++V+KAMGMESDQE+VQMV
Sbjct: 205 KGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHRFVKKIPIIIVLKAMGMESDQEIVQMV 264
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPR+S LLPS EEC GV TQ+QAL +L++KVK+ + EK+GR AL +L
Sbjct: 265 GRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKISYGT-PPEKDGR---ALSILR 320
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ FL+++PV NFR KC Y VM+RR+++A+LNKDAMDDKDYVGNKRLELSGQLISLLF
Sbjct: 321 DLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQLISLLF 380
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDL-ITHGLESTLSTGNFEIRRF 299
ED FKTM + + D +L+KP +A+RFD S L + I+ GLE TLSTGNF+I+RF
Sbjct: 381 EDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERTLSTGNFDIKRF 440
Query: 300 RMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEA 359
RM RKGMTQVL RLSFIG +G +T++SPQFEKSRKVSGPR+LQPSQWGMLCPCDTPEGE+
Sbjct: 441 RMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDTPEGES 500
Query: 360 CGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKH 419
CGLVKNLALMTHVTTDEEE PL+++CY LGV D+E LS EELHTPDSFLVI NGLILGKH
Sbjct: 501 CGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVILNGLILGKH 560
Query: 420 RRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEY 479
RP+ F ++R+LRRAGKIGEFVSV+ NEKQ CVY+ASD GRVCRPLVIAD GISR+K++
Sbjct: 561 SRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDVGRVCRPLVIADKGISRVKQH 620
Query: 480 HMKELMD 486
HMKEL D
Sbjct: 621 HMKELQD 627
>M4E8I4_BRARP (tr|M4E8I4) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra025090 PE=3 SV=1
Length = 1158
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/504 (65%), Positives = 395/504 (78%), Gaps = 18/504 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRSCRCVL+ KDE ELA+LGECPLDPGGYFVIKG EKV+LIQEQLSKNRIII DK
Sbjct: 145 MPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLIQEQLSKNRIIIDCDK 204
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
NI I M+KEK++L L++F K++P+++V+KAMGMESDQE+VQMV
Sbjct: 205 KGNINASVTSSTEMTKSKTVIQMDKEKIYLFLHQFVKKIPIIIVLKAMGMESDQEIVQMV 264
Query: 121 GRDPRYSLLLLPS-----------FEECAQNGVYTQEQALAHLDSKVKRSMFSN------ 163
GRDPR+S LLPS F EC GV T+++AL +L++KVK+S +
Sbjct: 265 GRDPRFSASLLPSMEASVIATCFFFHECISEGVTTRQEALDYLEAKVKKSSYGPPEKVFI 324
Query: 164 ISSEKEGRGSPALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDY 223
+ S + AL +L FL+++PV N+R KC Y VM+RR+++A+LNKDAMDDKDY
Sbjct: 325 LYSAIKLLDGKALYILRALFLAHVPVRDNNYRQKCFYVGVMLRRMIEAMLNKDAMDDKDY 384
Query: 224 VGNKRLELSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDL-IT 282
VGNKRLELSGQLISLLFED FKTM + D +L KP +A+RFD S L ++ I+
Sbjct: 385 VGNKRLELSGQLISLLFEDLFKTMTTEAIKKVDGILQKPTRASRFDFSQCLTGEKNHNIS 444
Query: 283 HGLESTLSTGNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQ 342
GLE TLSTGNF+I+RFRM RKGMTQVL RLSFIG +G +T++SPQFEKSRKVSGPR+LQ
Sbjct: 445 FGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPRSLQ 504
Query: 343 PSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELH 402
PSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD EE PL+++CY LGV D+E LS EELH
Sbjct: 505 PSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDIEEGPLVAMCYKLGVTDLEVLSAEELH 564
Query: 403 TPDSFLVIFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRV 462
TPDSFLVIFNGLI+GKHRRP+ F ++R+LRRAGKIGEFVSV++NEKQ CVY+ASDGGRV
Sbjct: 565 TPDSFLVIFNGLIIGKHRRPQYFANSLRRLRRAGKIGEFVSVFINEKQHCVYVASDGGRV 624
Query: 463 CRPLVIADNGISRIKEYHMKELMD 486
CRPLVIADNG+SR+K+YHMKEL D
Sbjct: 625 CRPLVIADNGVSRVKQYHMKELQD 648
>M1ATE1_SOLTU (tr|M1ATE1) DNA-directed RNA polymerase OS=Solanum tuberosum
GN=PGSC0003DMG400011445 PE=3 SV=1
Length = 1151
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/492 (66%), Positives = 385/492 (78%), Gaps = 20/492 (4%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRSC CVLYEKDE +LAKLGECPLDPGGYF++ G EKVILIQEQLSKNRIII D+
Sbjct: 149 MPIMLRSCLCVLYEKDEEQLAKLGECPLDPGGYFIVNGREKVILIQEQLSKNRIIIDTDR 208
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ I MEKEK++L+LN F +VP+MVVMKAMGMESDQEVVQM+
Sbjct: 209 KGCVQASVICSTEKTKSKTIIKMEKEKVYLELNMFKTKVPIMVVMKAMGMESDQEVVQMI 268
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRYS LLLPS EECA +YTQ QAL L+S +M S ++ E +G+ AL +L
Sbjct: 269 GRDPRYSALLLPSIEECADLKLYTQHQALEFLESDKMLTMPSYYNAPVE-KGARALSILR 327
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ FL+++PVHQ NFR KCIY AVMMRR+M+AILNKDAMDDKDYVGNKRLELSGQL+SLLF
Sbjct: 328 DMFLAHVPVHQHNFRKKCIYVAVMMRRVMEAILNKDAMDDKDYVGNKRLELSGQLLSLLF 387
Query: 241 EDRFKTMGEQVR------NSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNF 294
ED FKTM ++VR + S LL K+NR IT L+ TLSTGN+
Sbjct: 388 EDLFKTMNDEVRREFDASSKSSDLLYHVKKSNR-------------ITVELQRTLSTGNW 434
Query: 295 EIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 354
+I+RFRM RKGMT+VL RLS+IG LG MT++ PQFEKSRKVSGPRALQPSQ+GM+CPCDT
Sbjct: 435 DIKRFRMHRKGMTEVLARLSYIGTLGYMTKIKPQFEKSRKVSGPRALQPSQFGMICPCDT 494
Query: 355 PEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGL 414
PEGEACGLVKNLALMTHVTTDE+ P++SLCY LGVED+E LS ELHTP+S+L+I NGL
Sbjct: 495 PEGEACGLVKNLALMTHVTTDEDARPIMSLCYDLGVEDLEQLSAAELHTPNSYLIILNGL 554
Query: 415 ILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGIS 474
ILGKH+ P+ F MRKLRRAG+I EFVS++VN+KQ CVY+ASDGGRVCRPLVIA+ G+S
Sbjct: 555 ILGKHKSPQRFANGMRKLRRAGRIREFVSIFVNDKQCCVYIASDGGRVCRPLVIAEKGVS 614
Query: 475 RIKEYHMKELMD 486
RIKE+HM EL D
Sbjct: 615 RIKEHHMNELRD 626
>J3MAJ1_ORYBR (tr|J3MAJ1) DNA-directed RNA polymerase OS=Oryza brachyantha
GN=OB06G10350 PE=3 SV=1
Length = 1223
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/490 (64%), Positives = 385/490 (78%), Gaps = 17/490 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS CVL +DEAELA+ GECPLDPGGYF++KG EKVILIQEQLSKNRIII D
Sbjct: 215 LPIMLRSYACVLNGRDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDS 274
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
R + I MEKEK++L+LN+F K +P++VVMKAMGMESDQEVVQMV
Sbjct: 275 KRRVIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVVQMV 334
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRY LL PS +ECA +YTQ+QAL ++D KV M+ ++KEGR +L
Sbjct: 335 GRDPRYGDLLYPSIQECAFERIYTQKQALQYMDDKV---MYPGTGNQKEGRSK---SILR 388
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ F++++PV+ GNFR KCIY AVM+RR+MDAILN D DDKDYVGNKRLELSGQLISLLF
Sbjct: 389 DVFVAHVPVNSGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLISLLF 448
Query: 241 EDRFKTMG----EQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEI 296
ED FKTM E + +S+++ P D+S L +++ITHGLE +STGN++I
Sbjct: 449 EDLFKTMNSNAVELMNRTSERIHSSP-----LDLS--LHIKENIITHGLERAISTGNWDI 501
Query: 297 RRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 356
+RFRM RKG++QVL RLS++ LG MTR++PQFEK+RK SGPRALQPSQWGMLCPCDTPE
Sbjct: 502 KRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPE 561
Query: 357 GEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLIL 416
GEACGL KNLAL+THVTTD+EE PL++LCY LGVED+ LSGEE+H P S+LV+FNGLIL
Sbjct: 562 GEACGLTKNLALLTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIHAPGSYLVMFNGLIL 621
Query: 417 GKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRI 476
GKHR+P+ F AMRKLRR+G IGEFVS++VNEKQ C+++ASDGGRVCRPL+IAD GISR+
Sbjct: 622 GKHRQPQRFANAMRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGISRV 681
Query: 477 KEYHMKELMD 486
KE+HMKEL D
Sbjct: 682 KEHHMKELRD 691
>M0U5V6_MUSAM (tr|M0U5V6) DNA-directed RNA polymerase OS=Musa acuminata subsp.
malaccensis PE=3 SV=1
Length = 1164
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/498 (64%), Positives = 385/498 (77%), Gaps = 17/498 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRSCRC L KDEAEL+KLGECPLDPGGYFV+KG EKVILIQEQLSKNRIII D
Sbjct: 139 MPIMLRSCRCALSGKDEAELSKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDTDS 198
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ M+K+K++L+LN+F+K +P+MV+MKAMGMESDQE+VQMV
Sbjct: 199 KGRVTASVTSSTHETKSKTVFFMDKDKIYLQLNQFSKPIPIMVIMKAMGMESDQEIVQMV 258
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRY LLLPS +ECA +YTQ+QAL +LD KV +F + + KE + A +L
Sbjct: 259 GRDPRYGGLLLPSIQECASERIYTQQQALDYLDGKV---IFPWVGNHKEEGLAKA--ILL 313
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ FL+N+PV +GNFR +CIYAAVM+RR++DAILN D DDKDYVGNKRLELSGQL+SLLF
Sbjct: 314 DVFLANVPVFRGNFRPRCIYAAVMLRRMLDAILNTDTFDDKDYVGNKRLELSGQLVSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFD--------ISS----VLARHQDLITHGLEST 288
ED FK+M ++ + +++ D +SS +L+ ITHGLE
Sbjct: 374 EDLFKSMNAFALELVNRAYEHASRSSPLDFIHFTLGHVSSFTEMILSNIFYFITHGLEKA 433
Query: 289 LSTGNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGM 348
+STGN++++RF+M RKG++QV+ RLS+I LG MTR+SPQFEK+RKVSGPRALQPSQWGM
Sbjct: 434 ISTGNWDLKRFKMHRKGVSQVVSRLSYIAALGHMTRISPQFEKTRKVSGPRALQPSQWGM 493
Query: 349 LCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFL 408
LCPCDTPEGE CGL KNLALMTHVTTDEEE PLISLC+ LGVED+ SGEELH SFL
Sbjct: 494 LCPCDTPEGEGCGLTKNLALMTHVTTDEEEGPLISLCHSLGVEDLGLQSGEELHALRSFL 553
Query: 409 VIFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVI 468
VIFNGLILGKHR+P+ F +AMRKLRR GKIGEFVS++VNEKQ CVY+ASDGGRVCRPLVI
Sbjct: 554 VIFNGLILGKHRQPQRFASAMRKLRRCGKIGEFVSIFVNEKQHCVYVASDGGRVCRPLVI 613
Query: 469 ADNGISRIKEYHMKELMD 486
AD GISRIKE+HMKEL D
Sbjct: 614 ADKGISRIKEHHMKELRD 631
>K3YPM6_SETIT (tr|K3YPM6) DNA-directed RNA polymerase OS=Setaria italica
GN=Si016141m.g PE=3 SV=1
Length = 985
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/486 (64%), Positives = 380/486 (78%), Gaps = 9/486 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS C+L+ KDEAELA+LGECPLDPGGYF++KG EKVILIQEQLSKNRIII D
Sbjct: 146 MPIMLRSYACILHGKDEAELARLGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDS 205
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ I ++KEK++L+LN+F K +P++VVMKAMGMESDQEVVQMV
Sbjct: 206 KGRVIASVTSSTHEIKSKTVITLDKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVVQMV 265
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRY LL PS +ECA +YTQ+QAL ++D KV + ++KEGR +L
Sbjct: 266 GRDPRYGDLLFPSIQECASERIYTQQQALQYMDEKV---TYPGAGNQKEGRSK---SILR 319
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ F++++PV GNFR KCIY VM+RR+MDAILN + DDKDYVGNKRLELSGQLISLLF
Sbjct: 320 DVFIAHVPVKNGNFRQKCIYTGVMLRRMMDAILNANTFDDKDYVGNKRLELSGQLISLLF 379
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FKTM Q +K DK +++ D S L +H+ IT GLE +STGN++I+RFR
Sbjct: 380 EDLFKTMNSQAVELMNKNSDK-TRSSPSDFSQ-LIKHES-ITSGLERAISTGNWDIKRFR 436
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M RKG++QVL RLS++ LG MTR++PQFEK+RK SGPRALQPSQWGMLCPCDTPEGEAC
Sbjct: 437 MHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGEAC 496
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GL KNLAL+THVTTD+EE PL++LC LGVED+ LSGEE+H P SFLV+FNGLILGKHR
Sbjct: 497 GLTKNLALLTHVTTDQEEGPLMNLCKSLGVEDLSLLSGEEIHAPGSFLVMFNGLILGKHR 556
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+P+ F AMR LRR+GKIGEFVS++VNEKQ C+++ASDGGRVCRPL+IAD GISR+KE+H
Sbjct: 557 QPQTFANAMRNLRRSGKIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGISRVKEHH 616
Query: 481 MKELMD 486
MKEL D
Sbjct: 617 MKELRD 622
>K3YPE9_SETIT (tr|K3YPE9) DNA-directed RNA polymerase OS=Setaria italica
GN=Si016141m.g PE=3 SV=1
Length = 1154
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/486 (64%), Positives = 380/486 (78%), Gaps = 9/486 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS C+L+ KDEAELA+LGECPLDPGGYF++KG EKVILIQEQLSKNRIII D
Sbjct: 146 MPIMLRSYACILHGKDEAELARLGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDS 205
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ I ++KEK++L+LN+F K +P++VVMKAMGMESDQEVVQMV
Sbjct: 206 KGRVIASVTSSTHEIKSKTVITLDKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVVQMV 265
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRY LL PS +ECA +YTQ+QAL ++D KV + ++KEGR +L
Sbjct: 266 GRDPRYGDLLFPSIQECASERIYTQQQALQYMDEKV---TYPGAGNQKEGRSK---SILR 319
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ F++++PV GNFR KCIY VM+RR+MDAILN + DDKDYVGNKRLELSGQLISLLF
Sbjct: 320 DVFIAHVPVKNGNFRQKCIYTGVMLRRMMDAILNANTFDDKDYVGNKRLELSGQLISLLF 379
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FKTM Q +K DK +++ D S L +H+ IT GLE +STGN++I+RFR
Sbjct: 380 EDLFKTMNSQAVELMNKNSDK-TRSSPSDFSQ-LIKHES-ITSGLERAISTGNWDIKRFR 436
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M RKG++QVL RLS++ LG MTR++PQFEK+RK SGPRALQPSQWGMLCPCDTPEGEAC
Sbjct: 437 MHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGEAC 496
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GL KNLAL+THVTTD+EE PL++LC LGVED+ LSGEE+H P SFLV+FNGLILGKHR
Sbjct: 497 GLTKNLALLTHVTTDQEEGPLMNLCKSLGVEDLSLLSGEEIHAPGSFLVMFNGLILGKHR 556
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+P+ F AMR LRR+GKIGEFVS++VNEKQ C+++ASDGGRVCRPL+IAD GISR+KE+H
Sbjct: 557 QPQTFANAMRNLRRSGKIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGISRVKEHH 616
Query: 481 MKELMD 486
MKEL D
Sbjct: 617 MKELRD 622
>Q10JZ2_ORYSJ (tr|Q10JZ2) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=LOC_Os03g28960 PE=2 SV=1
Length = 1039
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/490 (63%), Positives = 380/490 (77%), Gaps = 17/490 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS CVL KDEAELA+ GECPLDPGGYF++KG EKVILIQEQLSKNRIII D
Sbjct: 148 LPIMLRSHACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDS 207
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ I MEKEK++L+LN+F K +P++VVMKAMGMESDQEV QMV
Sbjct: 208 KGRVIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVAQMV 267
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRY LL PS +ECA +YTQ+QAL ++D KV M+ ++KEGR +L
Sbjct: 268 GRDPRYGDLLYPSIQECAFERIYTQKQALQYMDDKV---MYPGAGNQKEGRSK---SILR 321
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ F++++PV GNFR KCIY AVM+RR+MDAILN D DDKDYVGNKRLELSGQLISLLF
Sbjct: 322 DVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLISLLF 381
Query: 241 EDRFKTMG----EQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEI 296
ED FKTM E + +S+K+ P D+S L +++ITHGLE +STGN++I
Sbjct: 382 EDLFKTMNSNAVELMNKTSEKIHSSP-----LDLS--LHIKENIITHGLERAISTGNWDI 434
Query: 297 RRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 356
+RFRM RKG++QVL RLS++ LG MTR++PQFEK+RK SGPRALQPSQWGMLCPCDTPE
Sbjct: 435 KRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPE 494
Query: 357 GEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLIL 416
GEACGL KNLAL+THVTTD+EE PL++LCY LGVED+ LSGEE+H SFLV+FNGLIL
Sbjct: 495 GEACGLTKNLALLTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIHASGSFLVMFNGLIL 554
Query: 417 GKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRI 476
GKHR+P+ F AMRKLRR+G IGEFVS++VNEKQ C+++ASDGGRVCRPL+IAD GI R+
Sbjct: 555 GKHRQPQRFANAMRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGIPRV 614
Query: 477 KEYHMKELMD 486
KE+HMK+L D
Sbjct: 615 KEHHMKQLRD 624
>K4D2C9_SOLLC (tr|K4D2C9) DNA-directed RNA polymerase OS=Solanum lycopersicum
GN=Solyc10g078880.1 PE=3 SV=1
Length = 1149
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/488 (66%), Positives = 381/488 (78%), Gaps = 12/488 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRSC CVLYEKDE +LAKLGECPLDPGGYFV+ G EKVILIQEQLSKNRIII D+
Sbjct: 148 MPIMLRSCLCVLYEKDEEQLAKLGECPLDPGGYFVVNGREKVILIQEQLSKNRIIIDTDR 207
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ I MEKEK++L+LN F +VP+MVVMKAMGMESDQEVVQM+
Sbjct: 208 KGCVQASVICSTEKTKSKTIIKMEKEKVYLELNMFKTKVPIMVVMKAMGMESDQEVVQMI 267
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRYS LLLPS EECA +YTQ QAL L++ M S + E +G+ AL +L
Sbjct: 268 GRDPRYSALLLPSIEECADLKLYTQHQALEFLENDKMFRMPSYSTGPVE-KGARALSILR 326
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ FL+++PV+Q NFR KCIY AVMMRR+M+AILNKDAMDDKDYVGNKRLELSGQL+SLLF
Sbjct: 327 DMFLAHVPVNQHNFRKKCIYVAVMMRRMMEAILNKDAMDDKDYVGNKRLELSGQLLSLLF 386
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVL--ARHQDLITHGLESTLSTGNFEIRR 298
ED FK+M ++ R D KP S +L + + IT L+ LSTGN++I+R
Sbjct: 387 EDLFKSMNDEARREFDAY-SKP--------SDLLYHVKRSNRITVELQRALSTGNWDIKR 437
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRM RKGMT+VL RLS+IG LG MT++ PQFEKSRKVSGPRALQPSQ+GM+CPCDTPEGE
Sbjct: 438 FRMHRKGMTEVLARLSYIGTLGYMTKIKPQFEKSRKVSGPRALQPSQFGMICPCDTPEGE 497
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTHVTTDE+E P++SLCY LGVED+E LS ELHTP+S+L+I NGLILGK
Sbjct: 498 ACGLVKNLALMTHVTTDEDERPIMSLCYDLGVEDLEQLSAAELHTPNSYLIILNGLILGK 557
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
HR P+ F MRKLRRAG+I EFVS++VN+KQ CVY+ASDGGRVCRPLVIA+ G+SRIKE
Sbjct: 558 HRSPQRFANGMRKLRRAGQIREFVSIFVNDKQCCVYIASDGGRVCRPLVIAEKGVSRIKE 617
Query: 479 YHMKELMD 486
HM EL D
Sbjct: 618 LHMNELRD 625
>Q84R88_ORYSJ (tr|Q84R88) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OSJNBb0041J20.7 PE=2 SV=1
Length = 1174
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/490 (63%), Positives = 380/490 (77%), Gaps = 17/490 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS CVL KDEAELA+ GECPLDPGGYF++KG EKVILIQEQLSKNRIII D
Sbjct: 167 LPIMLRSHACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDS 226
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ I MEKEK++L+LN+F K +P++VVMKAMGMESDQEV QMV
Sbjct: 227 KGRVIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVAQMV 286
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRY LL PS +ECA +YTQ+QAL ++D KV M+ ++KEGR +L
Sbjct: 287 GRDPRYGDLLYPSIQECAFERIYTQKQALQYMDDKV---MYPGAGNQKEGRSK---SILR 340
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ F++++PV GNFR KCIY AVM+RR+MDAILN D DDKDYVGNKRLELSGQLISLLF
Sbjct: 341 DVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLISLLF 400
Query: 241 EDRFKTMG----EQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEI 296
ED FKTM E + +S+K+ P D+S L +++ITHGLE +STGN++I
Sbjct: 401 EDLFKTMNSNAVELMNKTSEKIHSSP-----LDLS--LHIKENIITHGLERAISTGNWDI 453
Query: 297 RRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 356
+RFRM RKG++QVL RLS++ LG MTR++PQFEK+RK SGPRALQPSQWGMLCPCDTPE
Sbjct: 454 KRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPE 513
Query: 357 GEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLIL 416
GEACGL KNLAL+THVTTD+EE PL++LCY LGVED+ LSGEE+H SFLV+FNGLIL
Sbjct: 514 GEACGLTKNLALLTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIHASGSFLVMFNGLIL 573
Query: 417 GKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRI 476
GKHR+P+ F AMRKLRR+G IGEFVS++VNEKQ C+++ASDGGRVCRPL+IAD GI R+
Sbjct: 574 GKHRQPQRFANAMRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGIPRV 633
Query: 477 KEYHMKELMD 486
KE+HMK+L D
Sbjct: 634 KEHHMKQLRD 643
>Q10JZ3_ORYSJ (tr|Q10JZ3) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=Os03g0403100 PE=3 SV=1
Length = 1155
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/490 (63%), Positives = 380/490 (77%), Gaps = 17/490 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS CVL KDEAELA+ GECPLDPGGYF++KG EKVILIQEQLSKNRIII D
Sbjct: 148 LPIMLRSHACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDS 207
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ I MEKEK++L+LN+F K +P++VVMKAMGMESDQEV QMV
Sbjct: 208 KGRVIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVAQMV 267
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRY LL PS +ECA +YTQ+QAL ++D KV M+ ++KEGR +L
Sbjct: 268 GRDPRYGDLLYPSIQECAFERIYTQKQALQYMDDKV---MYPGAGNQKEGRSK---SILR 321
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ F++++PV GNFR KCIY AVM+RR+MDAILN D DDKDYVGNKRLELSGQLISLLF
Sbjct: 322 DVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLISLLF 381
Query: 241 EDRFKTMG----EQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEI 296
ED FKTM E + +S+K+ P D+S L +++ITHGLE +STGN++I
Sbjct: 382 EDLFKTMNSNAVELMNKTSEKIHSSP-----LDLS--LHIKENIITHGLERAISTGNWDI 434
Query: 297 RRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 356
+RFRM RKG++QVL RLS++ LG MTR++PQFEK+RK SGPRALQPSQWGMLCPCDTPE
Sbjct: 435 KRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPE 494
Query: 357 GEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLIL 416
GEACGL KNLAL+THVTTD+EE PL++LCY LGVED+ LSGEE+H SFLV+FNGLIL
Sbjct: 495 GEACGLTKNLALLTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIHASGSFLVMFNGLIL 554
Query: 417 GKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRI 476
GKHR+P+ F AMRKLRR+G IGEFVS++VNEKQ C+++ASDGGRVCRPL+IAD GI R+
Sbjct: 555 GKHRQPQRFANAMRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGIPRV 614
Query: 477 KEYHMKELMD 486
KE+HMK+L D
Sbjct: 615 KEHHMKQLRD 624
>I1PC40_ORYGL (tr|I1PC40) DNA-directed RNA polymerase OS=Oryza glaberrima PE=3
SV=1
Length = 1155
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/490 (63%), Positives = 380/490 (77%), Gaps = 17/490 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS CVL KDEAELA+ GECPLDPGGYF++KG EKVILIQEQLSKNRIII D
Sbjct: 148 LPIMLRSHACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDS 207
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ I MEKEK++L+LN+F K +P++VVMKAMGMESDQEV QMV
Sbjct: 208 KGRVIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVAQMV 267
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRY LL PS +ECA +YTQ+QAL ++D KV M+ ++KEGR +L
Sbjct: 268 GRDPRYGDLLYPSIQECAFERIYTQKQALQYMDDKV---MYPGAGNQKEGRSK---SILR 321
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ F++++PV GNFR KCIY AVM+RR+MDAILN D DDKDYVGNKRLELSGQLISLLF
Sbjct: 322 DVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLISLLF 381
Query: 241 EDRFKTMG----EQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEI 296
ED FKTM E + +S+K+ P D+S L +++ITHGLE +STGN++I
Sbjct: 382 EDLFKTMNSNAVELMNKTSEKIHSSP-----LDLS--LHIKENIITHGLERAISTGNWDI 434
Query: 297 RRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 356
+RFRM RKG++QVL RLS++ LG MTR++PQFEK+RK SGPRALQPSQWGMLCPCDTPE
Sbjct: 435 KRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPE 494
Query: 357 GEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLIL 416
GEACGL KNLAL+THVTTD+EE PL++LCY LGVED+ LSGEE+H SFLV+FNGLIL
Sbjct: 495 GEACGLTKNLALLTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIHASGSFLVMFNGLIL 554
Query: 417 GKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRI 476
GKHR+P+ F AMRKLRR+G IGEFVS++VNEKQ C+++ASDGGRVCRPL+IAD GI R+
Sbjct: 555 GKHRQPQRFANAMRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGIPRV 614
Query: 477 KEYHMKELMD 486
KE+HMK+L D
Sbjct: 615 KEHHMKQLRD 624
>I1HXW7_BRADI (tr|I1HXW7) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI3G05847 PE=3 SV=1
Length = 1158
Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/486 (63%), Positives = 380/486 (78%), Gaps = 8/486 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL KDEAELA+ GECPLDPGGYFV+KGNEKVILIQEQLSKNRIII D
Sbjct: 149 MPIMLRSYACVLNGKDEAELARYGECPLDPGGYFVVKGNEKVILIQEQLSKNRIIIDTDN 208
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ + IVM+KEK++L+LN+F K +P++VVMKAMG++SDQE+VQMV
Sbjct: 209 KKRVIASVTSSTHEVKSKTVIVMDKEKIYLQLNQFTKPIPIIVVMKAMGIQSDQEIVQMV 268
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRY LL S +ECA +YTQ+QAL ++D KV MF + KEGR +L
Sbjct: 269 GRDPRYGDLLYLSIQECASERIYTQQQALQYMDDKV---MFPGPGNVKEGRSK---TLLR 322
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ F++++PV GNFR KCIY AVM+RR++DAILN D DDKDYVGNKRLELSGQL+SLLF
Sbjct: 323 DVFVAHVPVENGNFREKCIYTAVMLRRMLDAILNSDTFDDKDYVGNKRLELSGQLVSLLF 382
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FKTM + +K D +++ D S ++ + QDLIT GLE +STGN++I+RF+
Sbjct: 383 EDLFKTMNSFAVDRMNKNSDMA-RSSPLDFSQLIMQ-QDLITTGLERAISTGNWDIKRFK 440
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M RKG++QVL RLS++ LG MTR++PQFEK+RK SGPRALQPSQWGMLCPCDTPEGEAC
Sbjct: 441 MHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGEAC 500
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GL KNLAL+THVTTD+EE PL++LCY LGVE + LSGEE+H P SFLV+FNGLILGKHR
Sbjct: 501 GLTKNLALLTHVTTDQEEGPLMNLCYSLGVEKLSLLSGEEIHAPGSFLVMFNGLILGKHR 560
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+P+ F +MR R++GKIGEFVS++VNEKQ C+++ASDGGRVCRPL+IAD G SR+KE+H
Sbjct: 561 QPQRFAKSMRTFRQSGKIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGRSRVKEHH 620
Query: 481 MKELMD 486
MKEL D
Sbjct: 621 MKELRD 626
>M0XLB7_HORVD (tr|M0XLB7) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=3 SV=1
Length = 823
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 306/486 (62%), Positives = 378/486 (77%), Gaps = 8/486 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL KDEAELA+ GECPLDPGGYF++KG EKVILIQEQLSKNRIII D
Sbjct: 149 MPIMLRSYACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDN 208
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ I MEKEK++L+LN+F K +P++VVMKAMG+E+DQEVVQMV
Sbjct: 209 KGRVIASVTSSTHEVKSKTVICMEKEKIYLQLNQFTKAIPIIVVMKAMGIETDQEVVQMV 268
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRY+ LL S +ECA +YTQ+QAL ++D KV + NI K+GR +L
Sbjct: 269 GRDPRYADLLYLSIQECATERIYTQQQALQYMDDKVTYAGAGNI---KDGRSK---LILR 322
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ F++++PV+ GNF+ KCIY AVM+RR++DAILN D DDKDYVGNKRLELSGQL+SLLF
Sbjct: 323 DVFIAHVPVNNGNFQPKCIYTAVMLRRMLDAILNSDTFDDKDYVGNKRLELSGQLVSLLF 382
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FKTM + +K D +++ D S ++ + QD+IT GLE +STGN++I+RF+
Sbjct: 383 EDLFKTMNTYAVDRMNKNSDMA-RSSPLDFSQLIMQ-QDVITSGLERAISTGNWDIKRFK 440
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M RKG++QVL RLS++ LG MTR++PQFEK+RK SGPRALQPSQWGMLCPCDTPEGEAC
Sbjct: 441 MHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGEAC 500
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GL KNLALMTHVTTD+EE PL +LC+ LGVED+ LSGEE+H P SFLV+FNGLILGKHR
Sbjct: 501 GLTKNLALMTHVTTDQEEGPLRNLCFSLGVEDLSLLSGEEIHAPGSFLVMFNGLILGKHR 560
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+P+ F MR RR+GKIGEFVSV+VNEKQ C+++ASDGGRVCRPL+IAD G +R+KE+H
Sbjct: 561 QPQKFANNMRTFRRSGKIGEFVSVFVNEKQHCIHIASDGGRVCRPLIIADKGRARVKEHH 620
Query: 481 MKELMD 486
MKEL D
Sbjct: 621 MKELRD 626
>F2EDG0_HORVD (tr|F2EDG0) Predicted protein OS=Hordeum vulgare var. distichum
PE=2 SV=1
Length = 823
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 306/486 (62%), Positives = 378/486 (77%), Gaps = 8/486 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL KDEAELA+ GECPLDPGGYF++KG EKVILIQEQLSKNRIII D
Sbjct: 149 MPIMLRSYACVLNGKDEAELARYGECPLDPGGYFIVKGAEKVILIQEQLSKNRIIIDTDN 208
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ I MEKEK++L+LN+F K +P++VVMKAMG+E+DQEVVQMV
Sbjct: 209 KGRVIASVTSSTHEVKSKTVICMEKEKIYLQLNQFTKAIPIIVVMKAMGIETDQEVVQMV 268
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRY+ LL S +ECA +YTQ+QAL ++D KV + NI K+GR +L
Sbjct: 269 GRDPRYADLLYLSIQECATERIYTQQQALQYMDDKVTYAGAGNI---KDGRSK---LILR 322
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ F++++PV+ GNF+ KCIY AVM+RR++DAILN D DDKDYVGNKRLELSGQL+SLLF
Sbjct: 323 DVFIAHVPVNNGNFQPKCIYTAVMLRRMLDAILNSDTFDDKDYVGNKRLELSGQLVSLLF 382
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FKTM + +K D +++ D S ++ + QD+IT GLE +STGN++I+RF+
Sbjct: 383 EDLFKTMNTYAVDRMNKNSDMA-RSSPLDFSQLIMQ-QDVITSGLERAISTGNWDIKRFK 440
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M RKG++QVL RLS++ LG MTR++PQFEK+RK SGPRALQPSQWGMLCPCDTPEGEAC
Sbjct: 441 MHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGEAC 500
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GL KNLALMTHVTTD+EE PL +LC+ LGVED+ LSGEE+H P SFLV+FNGLILGKHR
Sbjct: 501 GLTKNLALMTHVTTDQEEGPLRNLCFSLGVEDLSLLSGEEIHAPGSFLVMFNGLILGKHR 560
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+P+ F MR RR+GKIGEFVSV+VNEKQ C+++ASDGGRVCRPL+IAD G +R+KE+H
Sbjct: 561 QPQKFANNMRTFRRSGKIGEFVSVFVNEKQHCIHIASDGGRVCRPLIIADKGRARVKEHH 620
Query: 481 MKELMD 486
MKEL D
Sbjct: 621 MKELRD 626
>M0XLB2_HORVD (tr|M0XLB2) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=3 SV=1
Length = 654
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 305/484 (63%), Positives = 377/484 (77%), Gaps = 8/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL KDEAELA+ GECPLDPGGYF++KG EKVILIQEQLSKNRIII D
Sbjct: 149 MPIMLRSYACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDN 208
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ I MEKEK++L+LN+F K +P++VVMKAMG+E+DQEVVQMV
Sbjct: 209 KGRVIASVTSSTHEVKSKTVICMEKEKIYLQLNQFTKAIPIIVVMKAMGIETDQEVVQMV 268
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRY+ LL S +ECA +YTQ+QAL ++D KV + NI K+GR +L
Sbjct: 269 GRDPRYADLLYLSIQECATERIYTQQQALQYMDDKVTYAGAGNI---KDGRSK---LILR 322
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ F++++PV+ GNF+ KCIY AVM+RR++DAILN D DDKDYVGNKRLELSGQL+SLLF
Sbjct: 323 DVFIAHVPVNNGNFQPKCIYTAVMLRRMLDAILNSDTFDDKDYVGNKRLELSGQLVSLLF 382
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FKTM + +K D +++ D S ++ + QD+IT GLE +STGN++I+RF+
Sbjct: 383 EDLFKTMNTYAVDRMNKNSDMA-RSSPLDFSQLIMQ-QDVITSGLERAISTGNWDIKRFK 440
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M RKG++QVL RLS++ LG MTR++PQFEK+RK SGPRALQPSQWGMLCPCDTPEGEAC
Sbjct: 441 MHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGEAC 500
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GL KNLALMTHVTTD+EE PL +LC+ LGVED+ LSGEE+H P SFLV+FNGLILGKHR
Sbjct: 501 GLTKNLALMTHVTTDQEEGPLRNLCFSLGVEDLSLLSGEEIHAPGSFLVMFNGLILGKHR 560
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+P+ F MR RR+GKIGEFVSV+VNEKQ C+++ASDGGRVCRPL+IAD G +R+KE+H
Sbjct: 561 QPQKFANNMRTFRRSGKIGEFVSVFVNEKQHCIHIASDGGRVCRPLIIADKGRARVKEHH 620
Query: 481 MKEL 484
MKEL
Sbjct: 621 MKEL 624
>C5Z6F6_SORBI (tr|C5Z6F6) DNA-directed RNA polymerase OS=Sorghum bicolor
GN=Sb10g006995 PE=3 SV=1
Length = 1137
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 298/486 (61%), Positives = 369/486 (75%), Gaps = 9/486 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS C+L E DE ELAK GECPLDPGGYFV+KG EKVILIQEQLSKNRII+ D
Sbjct: 130 MPIMLRSSACILNEMDEDELAKYGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIVDTDS 189
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++M+K K++L+LN+F K +P++VVMKAMGMESDQE VQMV
Sbjct: 190 KGRVIASVTSSTHAIKSKTVVLMDKGKIYLQLNQFTKPIPIIVVMKAMGMESDQEAVQMV 249
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRY LL PS +ECA +YT++QAL ++D KV M+ ++ KEGR + +L
Sbjct: 250 GRDPRYGDLLFPSIQECASERIYTRQQALQYMDEKV---MYPGATNNKEGRSN---SILH 303
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ F++++PV GN R KCIY AVM+RR++DAILN D DDKDYVGNKR ELSGQLISLLF
Sbjct: 304 DVFIAHVPVKDGNLRPKCIYTAVMLRRMLDAILNSDTFDDKDYVGNKRFELSGQLISLLF 363
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FKTM Q +K DK +++ D S ++ QD IT GLE +STGN++I+RFR
Sbjct: 364 EDLFKTMNSQAVERMNKNSDK-TRSSPLDFSQLIM--QDTITFGLERAISTGNWDIKRFR 420
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M RKG++QVL RLS++ LG MTR++PQFEK+RK SGPRALQPSQWGMLCPCDTPEGEAC
Sbjct: 421 MHRKGVSQVLSRLSYMATLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGEAC 480
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GL KNLAL++H+TTD+EE PLI LC+ LGVED+ +LS EE+H P SFLV+ NGLILGKH+
Sbjct: 481 GLTKNLALLSHITTDQEEGPLIDLCHSLGVEDLLFLSSEEIHAPGSFLVMLNGLILGKHK 540
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
P+ V +R LRR+ IGEFVS+++NEKQ CV++ASDGGRVCRPL+IAD GISRI E H
Sbjct: 541 DPQRLVIHLRNLRRSNVIGEFVSIFINEKQRCVHIASDGGRVCRPLIIADMGISRIDETH 600
Query: 481 MKELMD 486
M +L D
Sbjct: 601 MTKLRD 606
>A9RNX6_PHYPA (tr|A9RNX6) DNA-directed RNA polymerase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_176819 PE=3 SV=1
Length = 1135
Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust.
Identities = 295/487 (60%), Positives = 374/487 (76%), Gaps = 17/487 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS RC+L K+EA+LAK+GECPLDPGGYFV+KG EKVILIQEQLSKNRIII D
Sbjct: 134 MPIMLRSSRCILAGKNEAQLAKVGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIITTDS 193
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ ++V++ E+++L+ N F +P++VVM+AMGMESDQE+VQMV
Sbjct: 194 SGSVAASVTSSTHERKSKTNMVVKHERIYLRHNTFGDDIPIVVVMRAMGMESDQEIVQMV 253
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDP+Y+ +L PS +ECA +YT QAL +L SKV R A +L
Sbjct: 254 GRDPKYAGILNPSLQECAALKIYTSHQALEYLGSKV--------------RVDEARDILA 299
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PVHQ +FR KCIY AV++R++++A+LN++A+DD DYVGNKRLEL+GQL+SLLF
Sbjct: 300 TVVLAHVPVHQFDFRAKCIYLAVIIRKMLEAMLNREAVDDMDYVGNKRLELAGQLLSLLF 359
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK M +++ S D L K +++ +FDI ++ D +T+GLE +S+GN+ ++RF+
Sbjct: 360 EDLFKRMNAELKKSMDATLSKANRSTQFDIIKLI--RPDTLTNGLEHAISSGNWAVKRFK 417
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+RKG+TQV+ RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWGMLCPCDTPEGEAC
Sbjct: 418 MDRKGVTQVVSRLSFIAALGHMTRISSQFEKTRKVSGPRALQPSQWGMLCPCDTPEGEAC 477
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNL+LMTHVTTDEEEAPLI LC LGVED+ LSGEELH+P ++LV FNG ILG HR
Sbjct: 478 GLVKNLSLMTHVTTDEEEAPLIELCTTLGVEDLSLLSGEELHSPKTYLVFFNGTILGVHR 537
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEK-QGCVYLASDGGRVCRPLVIADNGISRIKEY 479
RP F +RKLRRAGKIGEFVSV+VN K Q + +ASDGGRVCRPLVIAD G+SR+KE+
Sbjct: 538 RPNRFAEVLRKLRRAGKIGEFVSVHVNPKHQRNIQIASDGGRVCRPLVIADKGVSRVKEH 597
Query: 480 HMKELMD 486
HMKEL D
Sbjct: 598 HMKELKD 604
>D8T979_SELML (tr|D8T979) DNA-directed RNA polymerase OS=Selaginella
moellendorffii GN=SELMODRAFT_430375 PE=3 SV=1
Length = 1440
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 294/486 (60%), Positives = 377/486 (77%), Gaps = 21/486 (4%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS RC+L K +AELAKLGECPLDPGGYFV+KG EKVILIQEQLSKNRIII D
Sbjct: 453 MPVMLRSSRCILTGKSDAELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDSDS 512
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
++ M KLN F+ VP++VVMKAMGMESDQE++QMV
Sbjct: 513 TGSLSLAV------------------HMRGKLNVFSDDVPIVVVMKAMGMESDQEIIQMV 554
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G DP+++ +L PS +ECA GVYT QAL +L +KV+ + S + + + A +L
Sbjct: 555 GTDPKFAGILAPSMQECASLGVYTTHQALEYLGTKVRVNRQWG-SKQTKSKVDEARDILL 613
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
FL+++ VH+ +FR KCIY A+M+RR+++AIL+K+ +DD+DYVGNKRLEL+GQL++LLF
Sbjct: 614 NVFLAHVAVHKYDFRPKCIYVALMLRRMLEAILDKECVDDRDYVGNKRLELAGQLLALLF 673
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++++ D+ L K ++A+++D+S L D++T GLE+ +S+GN+ ++RFR
Sbjct: 674 EDLFKRSCSELKSNVDRTLSKMNRASQYDVSKSLK--PDMLTSGLENAISSGNWTVKRFR 731
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M++KG+TQV+ RLS+I LG MTRV+ QFEKSRKVSGPR+LQPSQWGMLCPCDTPEGE C
Sbjct: 732 MDKKGVTQVVSRLSYIAALGHMTRVASQFEKSRKVSGPRSLQPSQWGMLCPCDTPEGEGC 791
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GL KNLALMTH+TTD+EEAPLI LC LGVED+ LSGEE H+ ++FLV+FNG ILG HR
Sbjct: 792 GLTKNLALMTHITTDDEEAPLIDLCTNLGVEDINLLSGEEFHSKNAFLVMFNGTILGIHR 851
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
RP+ F T MRKLRRAGKIGEFVS++VNEKQ C+Y+ASDGGRVCRP+VIAD+G+SRIKE+H
Sbjct: 852 RPQQFATLMRKLRRAGKIGEFVSIFVNEKQRCIYIASDGGRVCRPVVIADHGVSRIKEHH 911
Query: 481 MKELMD 486
MKEL D
Sbjct: 912 MKELKD 917
>D8S1N7_SELML (tr|D8S1N7) DNA-directed RNA polymerase OS=Selaginella
moellendorffii GN=SELMODRAFT_443461 PE=3 SV=1
Length = 1386
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 286/486 (58%), Positives = 375/486 (77%), Gaps = 14/486 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS RC+L K +AELAKLGECPLDPGGYFV+KG EKVILIQEQLSKNRIII D
Sbjct: 392 MPVMLRSSRCILTGKSDAELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDSDS 451
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
++ +I+++ EK+++KLN F+ VP++VVMKAMGMESDQE++QMV
Sbjct: 452 TGSVTASVTSSTHERKSKTNIIIKHEKIYVKLNVFSDDVPIVVVMKAMGMESDQEIIQMV 511
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G DP+++ +L PS +ECA GVYT QAL +L +KV+ + S + + + A +L
Sbjct: 512 GTDPKFAGILAPSMQECASLGVYTTHQALEYLGTKVRVNRQWG-SKQTKSKVDEARDILL 570
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
FL+++ VH+ +FR KCIY A+M+RR+++AIL+K+ +DD+DYVGNKRLEL+GQL++LLF
Sbjct: 571 NVFLAHVAVHRYDFRPKCIYVALMLRRMLEAILDKECVDDRDYVGNKRLELAGQLLALLF 630
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++++ D+ L K ++A+++D+S L D++T GLE+ +S+GN+ ++RFR
Sbjct: 631 EDLFKRSCSELKSNVDRTLSKMNRASQYDVSKSLK--PDMLTSGLENAISSGNWTVKRFR 688
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M++KG+TQV+ RLS+I LG MTRV+ QFEKSRK WGMLCPCDTPEGE C
Sbjct: 689 MDKKGVTQVVSRLSYIAALGHMTRVASQFEKSRK-----------WGMLCPCDTPEGEGC 737
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GL KNLALMTH+TTD+EEAPLI LC LGVED+ LSGEE H+ ++FLV+FNG ILG HR
Sbjct: 738 GLTKNLALMTHITTDDEEAPLIDLCTNLGVEDINLLSGEEFHSKNAFLVMFNGTILGIHR 797
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
RP+ F T MRKLRRAGKIGEFVS++VNEKQ C+Y+ASDGGRVCRP+VIAD+G+SRIKE+H
Sbjct: 798 RPQQFATLMRKLRRAGKIGEFVSIFVNEKQRCIYIASDGGRVCRPVVIADHGVSRIKEHH 857
Query: 481 MKELMD 486
MKEL D
Sbjct: 858 MKELKD 863
>B9F8X6_ORYSJ (tr|B9F8X6) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OsJ_11195 PE=3 SV=1
Length = 1115
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 280/490 (57%), Positives = 343/490 (70%), Gaps = 56/490 (11%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS CVL KDEAELA+ GECPLDPGGYF++KG EKVILIQEQLSKNRIII D
Sbjct: 208 LPIMLRSHACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDS 267
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ I MEKEK++L+LN+F K +P++VVMKAMGMESDQEV QMV
Sbjct: 268 KGRVIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVAQMV 327
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRY LL PS +ECA +YTQ+QAL ++D KV M+ ++KEGR +L
Sbjct: 328 GRDPRYGDLLYPSIQECAFERIYTQKQALQYMDDKV---MYPGAGNQKEGRSK---SILR 381
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ F++++PV GNFR KCIY AVM+RR+MDAILN D DDKDYVGNKRLELSGQLISLLF
Sbjct: 382 DVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLISLLF 441
Query: 241 EDRFKTMG----EQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEI 296
ED FKTM E + +S+K+ P D+S L +++ITHGLE +STGN++I
Sbjct: 442 EDLFKTMNSNAVELMNKTSEKIHSSP-----LDLS--LHIKENIITHGLERAISTGNWDI 494
Query: 297 RRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 356
+RFRM RKG++QVL RLS++ LG MTR++PQFEK+RK SGPRALQPSQ
Sbjct: 495 KRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQ----------- 543
Query: 357 GEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLIL 416
CY LGVED+ LSGEE+H SFLV+FNGLIL
Sbjct: 544 ----------------------------CYSLGVEDLSLLSGEEIHASGSFLVMFNGLIL 575
Query: 417 GKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRI 476
GKHR+P+ F AMRKLRR+G IGEFVS++VNEKQ C+++ASDGGRVCRPL+IAD GI R+
Sbjct: 576 GKHRQPQRFANAMRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGIPRV 635
Query: 477 KEYHMKELMD 486
KE+HMK+L D
Sbjct: 636 KEHHMKQLRD 645
>B8AR02_ORYSI (tr|B8AR02) DNA-directed RNA polymerase OS=Oryza sativa subsp.
indica GN=OsI_11967 PE=3 SV=1
Length = 1117
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 279/490 (56%), Positives = 342/490 (69%), Gaps = 56/490 (11%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS CVL KDEAELA+ GECPLDPGGYF++KG EKVILIQEQLSKNRIII D
Sbjct: 210 LPIMLRSHACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDS 269
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ I MEKEK++L+LN+F K +P++VVMKAMGMESDQEV QMV
Sbjct: 270 KGRVIASVTSSTHEIKSKTVIFMEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVAQMV 329
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRY LL PS +ECA +YT +QAL ++D KV M+ ++KEGR +L
Sbjct: 330 GRDPRYGDLLYPSIQECAFERIYTLKQALQYMDDKV---MYPGAGNQKEGRSK---SILR 383
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ F++++PV GNFR KCIY AVM+RR+MDAILN D DDKDYVGNKRLELSGQLISLLF
Sbjct: 384 DVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFDDKDYVGNKRLELSGQLISLLF 443
Query: 241 EDRFKTMG----EQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEI 296
ED FKTM E + +S+K+ P D+S L +++ITHGLE +STGN++I
Sbjct: 444 EDLFKTMNSNAVELMNKTSEKIHSSP-----LDLS--LHIKENIITHGLERAISTGNWDI 496
Query: 297 RRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 356
+RFRM RKG++QVL RLS++ LG MTR++PQFEK+RK SGPRALQPSQ
Sbjct: 497 KRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQ----------- 545
Query: 357 GEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLIL 416
CY LGVED+ LSGEE+H SFLV+FNGLIL
Sbjct: 546 ----------------------------CYSLGVEDLSLLSGEEIHASGSFLVMFNGLIL 577
Query: 417 GKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRI 476
GKHR+P+ F AMRKLRR+G IGEFVS++VNEKQ C+++ASDGGRVCRPL+IAD GI R+
Sbjct: 578 GKHRQPQRFANAMRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRVCRPLIIADKGIPRV 637
Query: 477 KEYHMKELMD 486
KE+HMK+L D
Sbjct: 638 KEHHMKQLRD 647
>A4RS40_OSTLU (tr|A4RS40) DNA-directed RNA polymerase OS=Ostreococcus lucimarinus
(strain CCE9901) GN=OSTLU_39835 PE=3 SV=1
Length = 1146
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/491 (53%), Positives = 354/491 (72%), Gaps = 9/491 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS RCVL K+E ELA+LGECPLDPGGYF++KG EKVILIQEQLSKNRIII +D
Sbjct: 138 IPLMLRSSRCVLTGKNEDELARLGECPLDPGGYFIVKGVEKVILIQEQLSKNRIIIEVDA 197
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
I +IV++ K +L+ N FA +P+M+V+KAMG+ESDQE VQM+
Sbjct: 198 KGEIGASVTSSTHERKSKTNIVVKHGKFYLRHNTFADDIPIMIVLKAMGLESDQEAVQMI 257
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK--RSMFSN---ISSEKEGRGSPA 175
G +P Y++LL P+ +EC GV+T +QAL + +KV+ ++ +N + + R A
Sbjct: 258 GSEPAYAMLLGPTLQECQAAGVFTTQQALEYCANKVRVVKTHMTNRPGVRNFGRSRVDEA 317
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
+L L+++PV +FR KC Y ++M+RRI++A+L+ +DDKDY GNKRLEL+GQL
Sbjct: 318 RDILAGVVLAHVPVTSYDFRQKCAYISIMVRRILNAMLDPTQIDDKDYYGNKRLELAGQL 377
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
I+LLFED FK + ++ +D +L K ++A +FDI + QD +++GLE +S+GN+
Sbjct: 378 IALLFEDCFKRLNADLKRQADAVLSKANRATQFDILKCI--RQDTLSNGLEHAISSGNWT 435
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RFRMERKG+TQVL RLSFI LG MTR++ QFEK+RKVSGPRALQPSQWGMLCP DTP
Sbjct: 436 VKRFRMERKGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTP 495
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGE+CGLVKNLALMTHVTTD+EE PL L + LGVE + +L+ E+H+P V+ NG +
Sbjct: 496 EGESCGLVKNLALMTHVTTDDEEEPLRRLAHALGVEPLTWLNAGEMHSPSGAHVLMNGSL 555
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISR 475
LG H +P F A RKLRRAG+IGEFVSVY + GCVY++SDGGRVCRPL+I + G
Sbjct: 556 LGVHAQPEAFSHAFRKLRRAGRIGEFVSVYTAD--GCVYISSDGGRVCRPLIIIERGEPL 613
Query: 476 IKEYHMKELMD 486
+ + H+ EL D
Sbjct: 614 LTQEHLDELKD 624
>Q01FH9_OSTTA (tr|Q01FH9) DNA-directed RNA polymerase OS=Ostreococcus tauri
GN=Ot01g06000 PE=3 SV=1
Length = 2569
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 263/493 (53%), Positives = 351/493 (71%), Gaps = 11/493 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS RCVL K+E ELA+LGECPLDPGGYF++KG EKVILIQEQLSKNRIII +D
Sbjct: 166 IPLMLRSSRCVLTGKNEEELARLGECPLDPGGYFIVKGVEKVILIQEQLSKNRIIIDVDN 225
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
I +IV++ K++L+ N A + +M+V+KAMGMESDQE V M+
Sbjct: 226 KGEIGASVTSSTHERKSKTNIVVKHGKLYLRHNTCADDIAIMIVLKAMGMESDQEAVHMI 285
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK-------RSMFSNISSEKEGRGS 173
G DP Y++LL P+ +EC +G++T +QAL + SKV+ R+ + R
Sbjct: 286 GSDPTYAMLLAPTLQECHASGIFTMQQALEYCASKVRVVKMQSPRTQIGGARTYGRSRID 345
Query: 174 PALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSG 233
A +L L+++PV +FR KC Y ++M+RRI++A+L+ +DDKDY GNKRLEL+G
Sbjct: 346 EARDILAGVVLAHVPVVAYDFRQKCAYISIMVRRILNALLDPTQVDDKDYYGNKRLELAG 405
Query: 234 QLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGN 293
QLI+LLFED FK + ++ +D +L K ++A +FDI + QD +++GLE +S+GN
Sbjct: 406 QLIALLFEDCFKRLNADLKRQADAVLSKANRATQFDILKCI--RQDTLSNGLEHAISSGN 463
Query: 294 FEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCD 353
+ ++RFRMERKG+TQVL RLSFI LG MTR++ QFEK+RKVSGPRALQPSQWGMLCP D
Sbjct: 464 WTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSD 523
Query: 354 TPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNG 413
TPEGE+CGLVKNLALMTHVTTD+EE PL L + LGVE + +L+ E+H+P V+ NG
Sbjct: 524 TPEGESCGLVKNLALMTHVTTDDEEEPLRRLAHALGVEPLTWLNAGEMHSPQGAHVLMNG 583
Query: 414 LILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGI 473
+LG H +P F A RKLRRAG++GEFVSVY + GCVY++SDGGRVCRPL+I + G
Sbjct: 584 SLLGVHAQPEAFAHAFRKLRRAGRVGEFVSVYAAD--GCVYISSDGGRVCRPLIIIERGE 641
Query: 474 SRIKEYHMKELMD 486
+ + H++EL D
Sbjct: 642 PLLTQEHLEELKD 654
>M0XLB4_HORVD (tr|M0XLB4) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=3 SV=1
Length = 522
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/423 (61%), Positives = 325/423 (76%), Gaps = 8/423 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL KDEAELA+ GECPLDPGGYF++KG EKVILIQEQLSKNRIII D
Sbjct: 107 MPIMLRSYACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDN 166
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ I MEKEK++L+LN+F K +P++VVMKAMG+E+DQEVVQMV
Sbjct: 167 KGRVIASVTSSTHEVKSKTVICMEKEKIYLQLNQFTKAIPIIVVMKAMGIETDQEVVQMV 226
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRY+ LL S +ECA +YTQ+QAL ++D KV + NI K+GR +L
Sbjct: 227 GRDPRYADLLYLSIQECATERIYTQQQALQYMDDKVTYAGAGNI---KDGRSK---LILR 280
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ F++++PV+ GNF+ KCIY AVM+RR++DAILN D DDKDYVGNKRLELSGQL+SLLF
Sbjct: 281 DVFIAHVPVNNGNFQPKCIYTAVMLRRMLDAILNSDTFDDKDYVGNKRLELSGQLVSLLF 340
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FKTM + +K D +++ D S ++ + QD+IT GLE +STGN++I+RF+
Sbjct: 341 EDLFKTMNTYAVDRMNKNSDMA-RSSPLDFSQLIMQ-QDVITSGLERAISTGNWDIKRFK 398
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M RKG++QVL RLS++ LG MTR++PQFEK+RK SGPRALQPSQWGMLCPCDTPEGEAC
Sbjct: 399 MHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGEAC 458
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GL KNLALMTHVTTD+EE PL +LC+ LGVED+ LSGEE+H P SFLV+FNGLILGKHR
Sbjct: 459 GLTKNLALMTHVTTDQEEGPLRNLCFSLGVEDLSLLSGEEIHAPGSFLVMFNGLILGKHR 518
Query: 421 RPR 423
+P+
Sbjct: 519 QPQ 521
>M0XLB5_HORVD (tr|M0XLB5) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=3 SV=1
Length = 564
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/423 (61%), Positives = 325/423 (76%), Gaps = 8/423 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL KDEAELA+ GECPLDPGGYF++KG EKVILIQEQLSKNRIII D
Sbjct: 149 MPIMLRSYACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDN 208
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ I MEKEK++L+LN+F K +P++VVMKAMG+E+DQEVVQMV
Sbjct: 209 KGRVIASVTSSTHEVKSKTVICMEKEKIYLQLNQFTKAIPIIVVMKAMGIETDQEVVQMV 268
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRY+ LL S +ECA +YTQ+QAL ++D KV + NI K+GR +L
Sbjct: 269 GRDPRYADLLYLSIQECATERIYTQQQALQYMDDKVTYAGAGNI---KDGRSK---LILR 322
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+ F++++PV+ GNF+ KCIY AVM+RR++DAILN D DDKDYVGNKRLELSGQL+SLLF
Sbjct: 323 DVFIAHVPVNNGNFQPKCIYTAVMLRRMLDAILNSDTFDDKDYVGNKRLELSGQLVSLLF 382
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FKTM + +K D +++ D S ++ + QD+IT GLE +STGN++I+RF+
Sbjct: 383 EDLFKTMNTYAVDRMNKNSDMA-RSSPLDFSQLIMQ-QDVITSGLERAISTGNWDIKRFK 440
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M RKG++QVL RLS++ LG MTR++PQFEK+RK SGPRALQPSQWGMLCPCDTPEGEAC
Sbjct: 441 MHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCDTPEGEAC 500
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GL KNLALMTHVTTD+EE PL +LC+ LGVED+ LSGEE+H P SFLV+FNGLILGKHR
Sbjct: 501 GLTKNLALMTHVTTDQEEGPLRNLCFSLGVEDLSLLSGEEIHAPGSFLVMFNGLILGKHR 560
Query: 421 RPR 423
+P+
Sbjct: 561 QPQ 563
>D2VE37_NAEGR (tr|D2VE37) DNA-directed RNA polymerase OS=Naegleria gruberi
GN=NAEGRDRAFT_60598 PE=3 SV=1
Length = 1120
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 253/491 (51%), Positives = 349/491 (71%), Gaps = 10/491 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+ML+ RCVL KD+ ELAKLGECPLDPGGYF++KG EKV LIQEQLSKNR+II +DK
Sbjct: 105 MPIMLQCDRCVLCGKDDKELAKLGECPLDPGGYFIVKGVEKVCLIQEQLSKNRVIIDLDK 164
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ I +I+++ E+ +L N F K +P++++ KAMG+ESDQE+VQ++
Sbjct: 165 EKQITASVTGSTHYRKSKTNIIIKHERFYLDHNSFTKDIPIIMLFKAMGIESDQEIVQLI 224
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMF-SNISSEKEGRGSPALKVL 179
G D +Y L PSFEEC + GVYT EQA+ ++ +K + F N +E R ++L
Sbjct: 225 GSDRKYIDALGPSFEECIREGVYTSEQAIEYMSRYLKLADFRKNKPKMEETR-----EIL 279
Query: 180 EEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLL 239
L +IPV++ N+++K +Y A+M++R++DA+ + +DDKDY GNKRLE++GQL+SLL
Sbjct: 280 SNIILCHIPVYKFNYKMKIVYLAIMVKRMIDALHDSANIDDKDYYGNKRLEMAGQLLSLL 339
Query: 240 FEDRFKTMGEQVRNSSDKLLDKPDK----ANRFDISSVLARHQDLITHGLESTLSTGNFE 295
FED FK ++++ + +K + + DISS+ + IT GL++++S+GN+
Sbjct: 340 FEDLFKKFNDEIKKTLEKKTGRRSRRATSTPTEDISSIFNANSSKITEGLKNSISSGNWN 399
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWG+LCP DTP
Sbjct: 400 VQRFKMERAGVTHVLSRLSFIAALGMMTRISSQFEKTRKVSGPRALQPSQWGLLCPSDTP 459
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGE CGLVKNLAL+THVTTD+EE P+I L Y +GVED+ +SGEEL+ P S++V NGLI
Sbjct: 460 EGEGCGLVKNLALLTHVTTDDEEEPIIRLAYNIGVEDINLISGEELNHPSSYVVFLNGLI 519
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISR 475
LG HR P F R +RRAGKI EFVS++ N+ +Y+ASDGGRVCRPL+I +N +
Sbjct: 520 LGIHRFPSQFTKLFRMMRRAGKIHEFVSIFKNDLHKAIYIASDGGRVCRPLIIVENQKLK 579
Query: 476 IKEYHMKELMD 486
+ + H+ EL +
Sbjct: 580 VTQKHLSELAE 590
>C1N4K3_MICPC (tr|C1N4K3) DNA-directed RNA polymerase OS=Micromonas pusilla
(strain CCMP1545) GN=MICPUCDRAFT_22087 PE=3 SV=1
Length = 1197
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 261/487 (53%), Positives = 340/487 (69%), Gaps = 6/487 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS RCVL K E ELA+LGECPLDPGGYFV+KG EKV+LIQEQLSKNRIII +D
Sbjct: 192 IPLMLRSSRCVLTGKSEDELARLGECPLDPGGYFVVKGVEKVVLIQEQLSKNRIIIDVDA 251
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
I +IV++ K++L+ N F + VP++V +KAMG ESDQEVVQ+V
Sbjct: 252 KGEIGASVTSSTHERKSKTNIVVKHGKLYLRHNTFVEDVPILVALKAMGTESDQEVVQLV 311
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPALK 177
G DP Y+ LL+PS +EC+ ++TQ+QAL + +KV+ R + R A
Sbjct: 312 GPDPAYANLLIPSLQECSALAIFTQQQALEYCGAKVRTQSRMGGYQYGRNRRNRVDEARD 371
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+L L+++PV +FR KC Y AVM+RRI+ A++++ +DDKDY GNKRLEL+GQL++
Sbjct: 372 ILAGVVLAHVPVVAYDFRGKCAYVAVMIRRILHAMIDRTQIDDKDYYGNKRLELAGQLLA 431
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK + ++ +D +L K ++A +FDI + QD +++GLE +S+GN+ ++
Sbjct: 432 LLFEDCFKRLNADLKRQADAVLSKSNRATQFDIIKCI--RQDTLSNGLEHAISSGNWTVK 489
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMERKG+TQVL RLSFI LG MTR++ QFEK+RKVSGPRALQPSQWGMLCP DTPEG
Sbjct: 490 RFRMERKGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEG 549
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
E+CGLVKNLALMTHVTTD+EE PL L + LG + + + G ELH P +V NG ILG
Sbjct: 550 ESCGLVKNLALMTHVTTDDEEEPLRKLAFTLGTQPLSLICGAELHAPGGAIVFLNGSILG 609
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
H P F MR LRR GK+GEFVSV+ + G +Y+ASDGGRVCRPL+I +G
Sbjct: 610 VHSAPDRFARDMRYLRRIGKVGEFVSVHTTQG-GRLYIASDGGRVCRPLLIVADGEPLAT 668
Query: 478 EYHMKEL 484
H+ EL
Sbjct: 669 REHLDEL 675
>C1FIF0_MICSR (tr|C1FIF0) DNA-directed RNA polymerase OS=Micromonas sp. (strain
RCC299 / NOUM17) GN=MICPUN_86086 PE=3 SV=1
Length = 1159
Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust.
Identities = 266/484 (54%), Positives = 346/484 (71%), Gaps = 4/484 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS RC+L K E ELA+LGECPLDPGGYFV+KG EKVILIQEQLSKNRIII +D
Sbjct: 157 IPLMLRSSRCILTGKSEEELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDIDN 216
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ +IV++ K++L+ N F ++P+MV +KAMG ESDQEVVQMV
Sbjct: 217 KGEVGASVTSSTHERKSKTNIVVKHGKLYLRHNTFTDEIPIMVALKAMGCESDQEVVQMV 276
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G D Y+ LLLPS EC+ ++TQ+QAL + KV+ + S K + A +L
Sbjct: 277 GPDTAYASLLLPSLLECSALAIFTQQQALEYCGGKVRMATRMMYSRNKRSKVDEARDILA 336
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV +FR KC+Y A+M+RRI+ A+++ +DDKDY GNKRLEL+GQL++LLF
Sbjct: 337 GVVLAHVPVPAYDFRQKCVYVAIMIRRILHAMVDPTQVDDKDYYGNKRLELAGQLLALLF 396
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK + ++ +D +L K ++A +FDI + QD +++GLE +S+GN+ ++RFR
Sbjct: 397 EDCFKRLNADLKRQADAVLSKSNRATQFDIIKCI--RQDTLSNGLEHAISSGNWTVKRFR 454
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
MERKG+TQVL RLSFI LG MTR++ QFEK+RKVSGPRALQPSQWGMLCP DTPEGE+C
Sbjct: 455 MERKGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGESC 514
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTHVTTD+EE PL SL + LGVE + L G+ELH+P S LV NG ILG H+
Sbjct: 515 GLVKNLALMTHVTTDDEEEPLRSLAHVLGVEPLLLLVGQELHSPGSALVFLNGHILGVHQ 574
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
P F + R LRR G++GEFVSV+ G VY+ASDGGRVCRPL+I +NG +K+ H
Sbjct: 575 DPARFASDFRLLRRRGRVGEFVSVHTT--TGNVYIASDGGRVCRPLLIVENGELLVKQVH 632
Query: 481 MKEL 484
+ L
Sbjct: 633 LDAL 636
>I1CGM4_RHIO9 (tr|I1CGM4) DNA-directed RNA polymerase OS=Rhizopus delemar (strain
RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880)
GN=RO3G_12315 PE=3 SV=1
Length = 1146
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 255/488 (52%), Positives = 352/488 (72%), Gaps = 6/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS CVL K+EAELA++ ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ +DK
Sbjct: 146 LPIMLRSSHCVLSGKNEAELARMKECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVDVDK 205
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
NI I ++ K++LK N ++ +P+ + +KA+G++SD+E+ Q+V
Sbjct: 206 KNNIVANVQSSTHERKSKTAIFVKNGKIYLKHNSISEDIPVAIFLKALGVQSDREIAQLV 265
Query: 121 -GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK--RSMFSNISSEKEGRGSPALK 177
G D + EE ++ V+TQ QAL ++ +KVK R M + ++ AL+
Sbjct: 266 CGDDHDLHDTFSINIEESSRLRVFTQMQALDYIGAKVKVNRKMGPTV---RKTMAEEALE 322
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
VL L+++PV NFR K IYAAVM+RR++ A+ ++ +DD+DYVGNKRLEL+GQL+S
Sbjct: 323 VLATVILAHVPVENLNFREKSIYAAVMIRRVLAAMSDEVQVDDRDYVGNKRLELAGQLLS 382
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ ++DK+L KP++ FDI + L H D IT G +STGN+ ++
Sbjct: 383 LLFEDLFKKFNSDLKMNADKVLKKPNRTQEFDIFNQLVLHGDHITSGFIRAISTGNWVLK 442
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RF+M+R G+TQVL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEG
Sbjct: 443 RFKMDRAGITQVLSRLSYISALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEG 502
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TTD+EE P+ + + LGVED+ L+G E++ P++F+V+ NG+ILG
Sbjct: 503 EACGLVKNLALMTHITTDQEEDPIRKIAFALGVEDVNLLTGAEIYRPNTFIVLLNGVILG 562
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RR + FV + R+LRRAG+I EFVSV+VN Q V L+SDGGR+CRPL+I +NG+ +K
Sbjct: 563 ITRRVQHFVRSFRRLRRAGRISEFVSVFVNIHQKTVNLSSDGGRICRPLIIVENGVPAVK 622
Query: 478 EYHMKELM 485
++H+ +L+
Sbjct: 623 QHHINDLI 630
>M7NRL0_9ASCO (tr|M7NRL0) Uncharacterized protein OS=Pneumocystis murina B123
GN=PNEG_01931 PE=4 SV=1
Length = 1165
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/486 (49%), Positives = 343/486 (70%), Gaps = 2/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +C+L+ K EA++ ++ ECPLDPGGYF++KG EKVIL+QEQLSKNRII+ +
Sbjct: 162 LPIMLRSNKCILFNKTEAQITRMNECPLDPGGYFIVKGTEKVILVQEQLSKNRIIVEAEP 221
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ + V+ + K++LK N A+ VP++++ KAMG++SD+E++++
Sbjct: 222 KKGLVQASVISSTHERKSKTYVLTRNTKIYLKHNSIAEDVPIVLIFKAMGLQSDREILEL 281
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G DP Y + + EECA+ +YTQ+ AL +L ++VK S ++ ++ AL+V
Sbjct: 282 VAGLDPVYQDIFSINIEECAKLKIYTQQHALEYLGTRVKISRRNSGIIQRRPPSEEALEV 341
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
L L++IP+ NFR K IY A+M RR++ A+ N +DD+DYVGNKRLEL+GQL+SL
Sbjct: 342 LAAIVLAHIPIKNLNFRPKIIYFAIMTRRVLMAMKNPKMVDDRDYVGNKRLELAGQLLSL 401
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FKT ++ + DK+L KP++ FD + ++ H D IT G+ +STGN+ ++R
Sbjct: 402 LFEDLFKTFNRNLKLNIDKVLKKPNRTQEFDAYNQISIHGDHITFGMIRAISTGNWSLKR 461
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEK+RK+SGPRALQPSQ+GMLCP DTPEGE
Sbjct: 462 FKMERSGVTHVLSRLSYISVLGMMTRISSQFEKTRKISGPRALQPSQFGMLCPSDTPEGE 521
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGL+KNLALMTH+TTD +E P+ L + LG ED+ ++G EL+ P ++++ NG ILG
Sbjct: 522 ACGLIKNLALMTHITTDNDEEPIEKLAFILGTEDISLITGHELYAPGTYVIYLNGTILGI 581
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FV+ RKLRR G+I EFVS+Y+N V++ASDGGR+CRPL+I +NG S++
Sbjct: 582 TRFPANFVSNFRKLRRKGRISEFVSIYINNHYCSVHIASDGGRICRPLIIVENGKSKVTP 641
Query: 479 YHMKEL 484
H+K L
Sbjct: 642 RHLKSL 647
>L0PG77_PNEJ8 (tr|L0PG77) DNA-directed RNA polymerase OS=Pneumocystis jiroveci
(strain SE8) GN=PNEJI1_000049 PE=3 SV=1
Length = 1167
Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/488 (49%), Positives = 344/488 (70%), Gaps = 4/488 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +C+L+ K E ++ ++ ECPLDPGGYF++KG EKVIL+QEQLSKNRII+ +
Sbjct: 163 LPIMLRSNKCILFNKTETQIIRMNECPLDPGGYFIVKGTEKVILVQEQLSKNRIIVEAEP 222
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ + V+ K K++LK N A+ VP++++ KAMG +SDQE++++
Sbjct: 223 KKGLVQASVISSTHERKSKTYVLTKNAKIYLKHNSIAEDVPIVLIFKAMGFQSDQEILEL 282
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
+ G DP Y + + EECA+ +YTQ+QAL +L ++VK S ++ S++ AL+V
Sbjct: 283 IAGSDPNYQDMFAINIEECAKLKIYTQQQALEYLGARVKISRKNSELSQRRPPSEEALEV 342
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
L L++IPV NFR K IY A+M RR++ AI N +DD+DYVGNKRLEL+GQL+SL
Sbjct: 343 LAAIVLAHIPVENLNFRPKIIYFAIMTRRVLMAIKNPKMVDDRDYVGNKRLELAGQLLSL 402
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FKT ++ + DK+L KP++ FD + ++ H D IT G+ +STGN+ ++R
Sbjct: 403 LFEDLFKTFNRNLKLNIDKVLKKPNRTQEFDAYNQISIHGDHITSGMIRAISTGNWSLKR 462
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEK+RK+SGPRALQPSQ+GMLCP DTPEGE
Sbjct: 463 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKISGPRALQPSQFGMLCPSDTPEGE 522
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVE--DMEYLSGEELHTPDSFLVIFNGLIL 416
+CGL+KNLALMTH+TTD +E P+ L + LG E D+ ++G EL+ P ++++ NG+IL
Sbjct: 523 SCGLIKNLALMTHITTDNDEEPIEKLAFVLGTEEKDISLITGHELYAPGTYVIYLNGIIL 582
Query: 417 GKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRI 476
G R P FV+ RKLRR G+I EF+S+++N V++ASDGGR+CRPL+I +NG S++
Sbjct: 583 GITRFPTIFVSNFRKLRRKGQISEFISIHINHHYSSVHIASDGGRICRPLIIVENGKSKV 642
Query: 477 KEYHMKEL 484
H++ L
Sbjct: 643 TSQHLEAL 650
>R9PB27_9BASI (tr|R9PB27) Uncharacterized protein OS=Pseudozyma hubeiensis SY62
GN=PHSY_006175 PE=4 SV=1
Length = 715
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 251/488 (51%), Positives = 334/488 (68%), Gaps = 6/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+PVMLRS +CVL K E ELAK+ ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ D
Sbjct: 159 IPVMLRSNKCVLANKSEKELAKMSECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVEADT 218
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ V+ K K++LK N + +P+ + KAMG+++D+E++Q+
Sbjct: 219 KKGTVSASVTSSTHERKSKSYVLTKHGKIYLKHNSLHEDIPIAIAFKAMGIQADREILQL 278
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D + L + EE A+ G+YT++QAL ++ S+ K S S + AL V
Sbjct: 279 VAGHDDVHKELFAINLEEAARLGIYTRKQALDYVGSRAKAS--RKPLSMRRPLSEEALDV 336
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
L ++++PV + NFR K IY A M+RR++ A+ ++ +DD+DYVGNKRLEL+GQL++L
Sbjct: 337 LATVIMAHVPVERLNFRPKAIYIASMVRRVLMAMHDEKKVDDRDYVGNKRLELAGQLLAL 396
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L KP++ FD + + + D IT G +STGN+ ++R
Sbjct: 397 LFEDLFKKFNSDLKINIDKVLKKPNRTVEFDAFNQFSFNGDYITSGFVRAISTGNWSLKR 456
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEGE
Sbjct: 457 FKMERAGVTHVLSRLSFIAALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGE 516
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLAL TH+TTD EEAP+ + + LGVED+ L+G EL+ PDS++V NG +LG
Sbjct: 517 ACGLVKNLALTTHITTDVEEAPIARISFILGVEDIHLLTGAELYRPDSYVVFLNGNVLGV 576
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIAD--NGISRI 476
R P+ FV R+LRRAG+I EFVS+Y N VY+ASDGGR+CRPL+I D G R+
Sbjct: 577 TRFPQRFVLHFRRLRRAGRISEFVSIYTNHHHQTVYIASDGGRICRPLIIVDPVTGQPRV 636
Query: 477 KEYHMKEL 484
E HM +L
Sbjct: 637 TESHMHQL 644
>R9AIR7_WALIC (tr|R9AIR7) DNA-directed RNA polymerase III subunit RPC2
OS=Wallemia ichthyophaga EXF-994 GN=J056_003774 PE=4
SV=1
Length = 1152
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/485 (50%), Positives = 333/485 (68%), Gaps = 1/485 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+PVMLRS +C+L KDE LA+ ECPLDPGGYFV+KG EKVIL+QEQLSKNR+II D
Sbjct: 150 LPVMLRSNKCILTGKDEETLARYRECPLDPGGYFVVKGTEKVILVQEQLSKNRMIIETDS 209
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+N+ + + K++L+ N A VP++V +KAMG+ SD+E++Q+V
Sbjct: 210 KKNVQASVTSSTHERKSKSYVATKNGKIYLRHNSIADDVPIVVALKAMGVTSDREILQLV 269
Query: 121 -GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVL 179
G D Y + + EE + GV+T+ QAL + ++ K + + + +K A++ L
Sbjct: 270 AGHDDEYKEVFYINIEETLKMGVHTELQALEWIGARSKSARRAGPAHQKRPVWEDAIETL 329
Query: 180 EEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLL 239
L+++PV NFR K IY AVM+RR++ A++++ +DD+DYVGNKRLEL+GQL+SLL
Sbjct: 330 ASIVLAHVPVENLNFRPKAIYVAVMVRRVLMAMVDEKMLDDRDYVGNKRLELAGQLLSLL 389
Query: 240 FEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRF 299
FED FK ++ + DK+L KP++ FD + L D IT G +STGN+ ++RF
Sbjct: 390 FEDLFKKFNHDLKLNIDKVLKKPNRTTEFDAYTQLLYGGDHITSGFVRAISTGNWSLKRF 449
Query: 300 RMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEA 359
+MER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEGEA
Sbjct: 450 KMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEA 509
Query: 360 CGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKH 419
CGLVKNLALMTH+TTD EE P+ +CY LGVED+ L+G EL+ D+++V NG ++G
Sbjct: 510 CGLVKNLALMTHITTDVEEEPITKICYMLGVEDVALLTGTELYRRDTYIVSLNGNLIGVT 569
Query: 420 RRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEY 479
R P FV+ RKLRR G I EFVSVY+N V ++SDGGR+CRP+++ +NG S++
Sbjct: 570 RLPTRFVSTFRKLRRNGYINEFVSVYINHHHNSVNISSDGGRICRPMIVVENGYSKVTSE 629
Query: 480 HMKEL 484
H+K L
Sbjct: 630 HIKAL 634
>D3B936_POLPA (tr|D3B936) DNA-directed RNA polymerase OS=Polysphondylium pallidum
GN=rpc2 PE=3 SV=1
Length = 1139
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 246/486 (50%), Positives = 339/486 (69%), Gaps = 3/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS CVL K +LA LGECPLDPGGYF+++GNEKVIL EQLSKNRIII D
Sbjct: 145 IPIMLRSSNCVLTNKSHEQLANLGECPLDPGGYFIVRGNEKVILNHEQLSKNRIIIETDA 204
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
I+M+ K++LK N FA+ +P+++ +K MG+E+DQEVVQ+V
Sbjct: 205 KGVPCSTVTSSTHERKSRTSIIMKHGKLYLKHNTFAEDIPVVIFLKGMGVETDQEVVQLV 264
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + + + S EEC + V+TQ QAL +L +++K S+ K+ + A +L
Sbjct: 265 GSEEIFLDAIASSLEECNKCKVHTQTQALDYLGARIK-SIRKPWGMSKKSKSEEAKDILA 323
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFRLK IY A+M+RRI+ A ++ +DDKDY GNKRLELSGQLISLLF
Sbjct: 324 GVVLNHVPVRRYNFRLKVIYVALMIRRIIIATKDRSTLDDKDYYGNKRLELSGQLISLLF 383
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ ++D+ + KP++A FD +S++ + +T+G +S+G + ++RF+
Sbjct: 384 EDLFKKFLAELKKATDQAILKPNRAMVFDFASII--RTETLTNGFVHAISSGQWNLKRFK 441
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
MER G+TQVL RLSFI LG MTR+ QFEK+RK+SGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 442 MERSGVTQVLSRLSFISALGMMTRIQSQFEKTRKISGPRSLQPSQWGMLCPSDTPEGEAC 501
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKN A MTHVTTDE E PL+ L Y LGV+D+ ++GEEL++ +FLV NG I+G H
Sbjct: 502 GLVKNFAQMTHVTTDEPEGPLLRLAYNLGVQDILLITGEELNSRTAFLVFLNGQIIGIHN 561
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
P FV +RK+RRAG+I EF+S+ NE V +A DGGR+CRP++I +NG R++++H
Sbjct: 562 SPTLFVNTLRKMRRAGRIREFISICKNEAHKTVSIACDGGRLCRPMIIVENGRPRVQQFH 621
Query: 481 MKELMD 486
++EL D
Sbjct: 622 IEELKD 627
>C3YYC3_BRAFL (tr|C3YYC3) DNA-directed RNA polymerase OS=Branchiostoma floridae
GN=BRAFLDRAFT_282817 PE=3 SV=1
Length = 1137
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/484 (53%), Positives = 337/484 (69%), Gaps = 7/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K +ELAKL ECPLDPGGYF++KG EKVILIQEQLSKNR+I+ D+
Sbjct: 128 MPIMLRSSNCVLTGKSPSELAKLKECPLDPGGYFLVKGVEKVILIQEQLSKNRMIVETDR 187
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
I +V + K +LK N F + +P+ + KAMG+ESDQE+VQ++
Sbjct: 188 KGLISCSVTSSTHERKTKTYVVQKNAKYFLKHNTFTEDIPIAIAFKAMGVESDQEIVQLI 247
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G D R + PS EEC + V+TQ+QAL + KV+RS + K R A +VL
Sbjct: 248 GTDARTMAAVAPSLEECHKAQVFTQKQALRFIGVKVRRSRWG---GPKRTRVEEAREVLH 304
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFRLKC+Y A+M+RR++ A +D +DD+DY GNKRLEL+GQL++LLF
Sbjct: 305 STILAHVPVVKFNFRLKCVYLALMVRRVVQA-QAQDRVDDRDYYGNKRLELAGQLLALLF 363
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+ + KP +A +FDI V QD IT+GL + +STGN+ ++RF+
Sbjct: 364 EDLFKKFNAELKKIADQTIPKP-RAAQFDI--VKHMRQDQITNGLVNAISTGNWTVKRFK 420
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R G+TQVL RLSFI LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 421 MDRAGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 480
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD EE P+ L + LGVED+ LSGEEL++ DS+LV+ NG ILG
Sbjct: 481 GLVKNLALMTHITTDSEEQPIQRLAFNLGVEDVHLLSGEELNSQDSYLVMLNGNILGVIC 540
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ + + RK+RRAG I EFVS+ N + CV +ASD GRVCRP +I NG + H
Sbjct: 541 DHQHLIRSFRKMRRAGYINEFVSICPNHEHRCVNIASDAGRVCRPYIIVTNGRPMVTNRH 600
Query: 481 MKEL 484
++EL
Sbjct: 601 IEEL 604
>E6ZVD4_SPORE (tr|E6ZVD4) DNA-directed RNA polymerase OS=Sporisorium reilianum
(strain SRZ2) GN=sr10877 PE=3 SV=1
Length = 1170
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/488 (51%), Positives = 333/488 (68%), Gaps = 6/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+PVMLRS +CVL K E ELAK+ ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ D
Sbjct: 160 IPVMLRSNKCVLANKSEKELAKMSECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVEADT 219
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ V+ K K++LK N + +P+ V KAMG+++D+E++Q+
Sbjct: 220 KKGTVSASVTSSTHERKSKSYVLTKHGKIYLKHNSLHEDIPIAVAFKAMGIQADREILQL 279
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D + L + EE A+ G+YT++QAL ++ ++ K S S + AL V
Sbjct: 280 VAGHDDIHKELFAINLEEAARLGIYTRKQALDYIGARAKAS--RKPLSMRRPLAEEALDV 337
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
L ++++PV + NFR K IY A M+RR++ A+ ++ +DD+DYVGNKRLEL+GQL++L
Sbjct: 338 LATVIMAHVPVERLNFRPKAIYIASMVRRVLMAMQDEKKVDDRDYVGNKRLELAGQLLAL 397
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L KP++ FD + + D IT G +STGN+ ++R
Sbjct: 398 LFEDLFKKFNSDLKINIDKVLKKPNRTVEFDAFNQFHFNGDYITAGFVRAISTGNWSLKR 457
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEGE
Sbjct: 458 FKMERAGITHVLSRLSFIAALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGE 517
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLAL TH+TTD EE P+ + + LGVED+ L+G EL+ PDS++V NG +LG
Sbjct: 518 ACGLVKNLALTTHITTDVEEEPIARIAFTLGVEDIHLLTGAELYRPDSYVVYLNGNVLGV 577
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIAD--NGISRI 476
R P+ FV R+LRRAG+I EFVSVY N VY+ASDGGR+CRPL+I D G R+
Sbjct: 578 TRFPQRFVHQFRRLRRAGRISEFVSVYTNNHHQTVYIASDGGRICRPLIIVDAVTGQPRV 637
Query: 477 KEYHMKEL 484
E HM++L
Sbjct: 638 TESHMRQL 645
>Q4PBR7_USTMA (tr|Q4PBR7) DNA-directed RNA polymerase OS=Ustilago maydis (strain
521 / FGSC 9021) GN=UM02446.1 PE=3 SV=1
Length = 1169
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/493 (51%), Positives = 334/493 (67%), Gaps = 16/493 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+PVMLRS +CVL K E ELAK+ ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ D
Sbjct: 159 IPVMLRSNKCVLANKSEKELAKMSECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVEADT 218
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ V+ K K++LK N + +P+ V KAMG+++D+E++Q+
Sbjct: 219 KKGTVSASVTSSTHERKSKSYVLTKHGKIYLKHNSLHEDIPIAVAFKAMGIQADREILQL 278
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRS-----MFSNISSEKEGRGS 173
V G D + L + EE A+ G+YT++QAL + ++ K S M +S E
Sbjct: 279 VAGHDDIHKELFAINLEEAARLGIYTRKQALDFIGARAKASRKPLSMRRPLSEE------ 332
Query: 174 PALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSG 233
AL VL ++++PV + NFR K IY A M+RR++ A+ ++ +DD+DYVGNKRLEL+G
Sbjct: 333 -ALDVLATVIMAHVPVERLNFRPKAIYIASMVRRVLMAMQDEKKVDDRDYVGNKRLELAG 391
Query: 234 QLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGN 293
QL+SLLFED FK ++ + DK+L KP++ FD + + D IT G +STGN
Sbjct: 392 QLLSLLFEDLFKKFNSDLKMNIDKVLKKPNRTVEFDAFNQFHFNGDYITSGFVRAISTGN 451
Query: 294 FEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCD 353
+ ++RF+MER G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP D
Sbjct: 452 WSLKRFKMERAGITHVLSRLSFIAALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSD 511
Query: 354 TPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNG 413
TPEGEACGLVKNLAL TH+TTD EE P+ + + LGVED+ L+G EL+ PDS++V NG
Sbjct: 512 TPEGEACGLVKNLALTTHITTDVEEEPIARIAFTLGVEDIHLLTGAELYRPDSYVVYLNG 571
Query: 414 LILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIAD--N 471
+LG R P+ FV R+LRRAG++ EFVSVY N VY+ASDGGR+CRPL+I D
Sbjct: 572 NVLGVTRFPQRFVLQFRRLRRAGRVSEFVSVYTNHHHQTVYIASDGGRICRPLIIVDAFT 631
Query: 472 GISRIKEYHMKEL 484
G R+ E HM++L
Sbjct: 632 GHPRVTESHMQQL 644
>B6JW67_SCHJY (tr|B6JW67) DNA-directed RNA polymerase OS=Schizosaccharomyces
japonicus (strain yFS275 / FY16936) GN=SJAG_00637 PE=3
SV=1
Length = 1160
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/489 (50%), Positives = 341/489 (69%), Gaps = 10/489 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVLY K E ELA L ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ +
Sbjct: 155 MPVMLRSNKCVLYGKSEKELAALNECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVEAEP 214
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
++ + V+ K ++++K N + +P+++ +KAMG++SD+E+ ++
Sbjct: 215 SKEMWQASVTSSTHERKSKTYVVTKNGRLYMKHNSVNEDIPIVIALKAMGLQSDREIFEL 274
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G + Y L PS EE A+ VYT EQAL ++ S VK R+ + + +E A
Sbjct: 275 VAGSEANYQDLFAPSVEEAAKLNVYTTEQALNYIGSHVKVNRRAGAARLPPHEE-----A 329
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
L+VL L++I V +FR K +Y A+M RR++ A+++ +DD+DYVGNKRLEL+GQL
Sbjct: 330 LEVLAAVVLAHISVVNLDFRPKAVYVAMMARRVLMAMVDPSQVDDRDYVGNKRLELAGQL 389
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
++LLFED FK ++ + DK+L KP++ FD + L+ H D IT G+ LSTGN+
Sbjct: 390 LALLFEDLFKKFNSDLKLNIDKVLKKPNRTQEFDAYNQLSMHGDHITQGMVRALSTGNWS 449
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLSFI LG MTR++ QFEK+RKVSGPR+LQPSQ+GMLC DTP
Sbjct: 450 LKRFKMERAGVTHVLSRLSFISALGMMTRITSQFEKTRKVSGPRSLQPSQFGMLCTSDTP 509
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTDEEE PLI L Y GVED+ ++G E+ DS+LV NG I
Sbjct: 510 EGEACGLVKNLALMTHITTDEEEGPLIRLAYAFGVEDVHTVTGREILAQDSYLVYINGSI 569
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISR 475
LG R P FV+ R+LRR+G+I FV +++NE Q V++++DGGR+CRPL++ +NG+ R
Sbjct: 570 LGITRYPSRFVSCFRRLRRSGRISPFVGIFINEHQRAVFISADGGRICRPLIVVENGLPR 629
Query: 476 IKEYHMKEL 484
+ H+++L
Sbjct: 630 VTNEHIRKL 638
>G1X681_ARTOA (tr|G1X681) DNA-directed RNA polymerase OS=Arthrobotrys oligospora
(strain ATCC 24927 / CBS 115.81 / DSM 1491)
GN=AOL_s00054g375 PE=3 SV=1
Length = 1166
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/486 (50%), Positives = 338/486 (69%), Gaps = 4/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +CVL K E E+A L ECPLDPGGYF+I G EKVIL+QEQLSKNRII+ D
Sbjct: 161 LPIMLRSNKCVLTNKSEHEMAVLKECPLDPGGYFIINGTEKVILVQEQLSKNRIIVEADT 220
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K+ ++L+ N ++ VP+++V+KA+G++SD E++ M
Sbjct: 221 KKQIVQASVTSSTHERKSNTYVLSKKGAIYLRHNSVSEDVPIVLVLKALGIQSDHEILLM 280
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEEC++ GV+TQ+QAL + ++V+ S I + ++ AL+
Sbjct: 281 VAGTDSVYQDTFSVNFEECSKLGVFTQQQALDYFGARVRTS--RKILTTRKSYAHEALEA 338
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
L L+++PV NFR K +Y AVM RRI+ A+ N +DD+DYVGNKRLEL+GQL+SL
Sbjct: 339 LATIVLAHVPVKNLNFRPKALYIAVMTRRILMAMANPQLVDDRDYVGNKRLELAGQLLSL 398
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK +++ + DK+L KP++ FD ++L+ H IT G+ +STGN+ ++R
Sbjct: 399 LFEDLFKRFNGELKMNIDKILKKPNRTEEFDAYNILSGHGHTITQGMNRAISTGNWSLKR 458
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEGE
Sbjct: 459 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPSDTPEGE 518
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD++E +I L LG ED+ +SG+EL+ P ++++ NG G
Sbjct: 519 ACGLVKNLALMTHITTDDDEEHVIRLAMVLGAEDVLAVSGQELYAPGAYVIFMNGTPFGI 578
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P F+T RK+RR GKI EFVS+++N QG V++A+DGGR+CRPL+I +N S++
Sbjct: 579 TRYPARFLTRFRKMRRMGKISEFVSIFINHHQGGVHIATDGGRICRPLIIVENKKSKVTL 638
Query: 479 YHMKEL 484
H+K L
Sbjct: 639 RHIKSL 644
>F4RWM5_MELLP (tr|F4RWM5) DNA-directed RNA polymerase OS=Melampsora
larici-populina (strain 98AG31 / pathotype 3-4-7)
GN=MELLADRAFT_49581 PE=3 SV=1
Length = 1135
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 242/486 (49%), Positives = 328/486 (67%), Gaps = 2/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +CVL K +AELAK+ ECPLDPGGYFV+KG EKVIL+QEQLSKNRI+I D
Sbjct: 132 MPIMLRSNKCVLTNKSDAELAKMTECPLDPGGYFVVKGTEKVILVQEQLSKNRILIETDS 191
Query: 61 NR-NIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I +V + K++LK N +++P+++ +KA G+ SD EVVQ+
Sbjct: 192 RKGTIMASVTSSTHERKSKTYVVTKNSKVYLKHNSIQEEIPVVIALKAYGITSDNEVVQL 251
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G + Y E+C + G+YTQ+QAL ++ VK + + K AL+V
Sbjct: 252 VCGNNDDYRSTFSICIEQCHEAGIYTQKQALEYIGKSVKVMKKGPMVTVKRPLSEEALEV 311
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
L L+++P N + K +Y AVM RR++ A+ N +DD+DYVGNKRLEL+GQL+SL
Sbjct: 312 LSTVVLAHVPAENMNLQPKALYLAVMARRVIQAMANPKLVDDRDYVGNKRLELAGQLLSL 371
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L KP++ FD + H D I+HG +STGN+ I+R
Sbjct: 372 LFEDLFKKFNTDLKMNIDKILKKPNRTTEFDAINQFRMHGDHISHGFIRAISTGNWSIKR 431
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEGE
Sbjct: 432 FKMERAGITHVLSRLSYISALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGE 491
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD +E P+ ++ Y +G ED+ ++G EL+ P ++V NG ILG
Sbjct: 492 ACGLVKNLALMTHITTDVDEEPIWNVAYTIGCEDISSVTGTELYLPRHYIVFINGNILGL 551
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FV R+ RRAG++ EFVS+Y+N Q V +A+DGGR+CRP++I D+G+ R+
Sbjct: 552 SRSPERFVKVFRQFRRAGQVSEFVSIYMNSDQQTVNIATDGGRICRPMIIVDHGVPRVTS 611
Query: 479 YHMKEL 484
H++ L
Sbjct: 612 SHIQLL 617
>K3X1L2_PYTUL (tr|K3X1L2) DNA-directed RNA polymerase OS=Pythium ultimum
GN=PYU1_G011087 PE=3 SV=1
Length = 1178
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/499 (49%), Positives = 331/499 (66%), Gaps = 17/499 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS CVL EK EAELAKL ECP DPGGYF++KG EKV+LI EQLSKNR+II D
Sbjct: 150 IPIMLRSANCVLTEKGEAELAKLKECPYDPGGYFIVKGVEKVVLIHEQLSKNRVIIEEDA 209
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+N+ +I + K +++LK N F +P+++V + MGMESDQE+V ++
Sbjct: 210 KQNVCASITSSTHERKSRTNIFINKNRVYLKSNSFGSDIPIVIVFRGMGMESDQEIVSLI 269
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK-------------RSMFSNISSE 167
G +P + L SFEE + V+TQ QAL ++ SK+ +
Sbjct: 270 GSEPDVTDALTASFEEASDLKVFTQLQALEYIGSKMNAVTKVGATGGRHRGGGGGGGHHQ 329
Query: 168 KEGRGSPALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNK 227
A L L+++P NFRLKCIY A ++RRI+ ++ +DDKDY GNK
Sbjct: 330 DRSLADAARSALANLVLNHVPCEDYNFRLKCIYVAHIVRRIIFTDKDRTRLDDKDYYGNK 389
Query: 228 RLELSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLES 287
RLEL+GQL+SLLFED FK ++ +D +L KP++A FDI + D IT G
Sbjct: 390 RLELAGQLLSLLFEDLFKRFNSDLKRQADMVLSKPNRAAVFDILKCI--RTDTITQGFYH 447
Query: 288 TLSTGNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWG 347
LSTGN+ ++RFRM+R G+T VL RLS++ LG MTR+S QFEK+RKVSGPR+LQPSQWG
Sbjct: 448 ALSTGNWTLKRFRMDRAGVTHVLSRLSYMSALGMMTRISSQFEKTRKVSGPRSLQPSQWG 507
Query: 348 MLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSF 407
MLCP DTPEGEACGLVKNLAL+ HVT+DEE AP+ LC+ LGV D+ SGEE++ ++
Sbjct: 508 MLCPADTPEGEACGLVKNLALLCHVTSDEEAAPIKRLCFDLGVTDVSLSSGEEINHSSNY 567
Query: 408 LVIFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLV 467
LV+ NG+I+G H PR FVT +R++RRAG IGEFVSV +++ Q VY+ASDGGRVCRPL+
Sbjct: 568 LVVLNGVIIGTHVNPRAFVTRLRRIRRAGLIGEFVSVMMHDVQRVVYIASDGGRVCRPLL 627
Query: 468 IAD--NGISRIKEYHMKEL 484
+ D +R+ + H+ EL
Sbjct: 628 LIDPVTHKTRLTQRHLDEL 646
>E3K9U7_PUCGT (tr|E3K9U7) DNA-directed RNA polymerase OS=Puccinia graminis f. sp.
tritici (strain CRL 75-36-700-3 / race SCCL)
GN=PGTG_07203 PE=3 SV=1
Length = 1272
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 245/486 (50%), Positives = 329/486 (67%), Gaps = 2/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +CVL K +AELAK+ ECPLDPGGYFV+KG EKVIL+QEQLSKNRI+I D
Sbjct: 269 IPIMLRSNKCVLTGKSDAELAKMTECPLDPGGYFVVKGTEKVILVQEQLSKNRILIETDS 328
Query: 61 NR-NIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I +V + K++LK N +++P+ + +KA G+ SD+EVVQ+
Sbjct: 329 RKGTIMASVTSSTHERKSKTYVVTKNSKVYLKHNSIQEEIPIAIALKAYGITSDREVVQI 388
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G + Y E C + GV+TQ+QALA++ VK ++ K AL+V
Sbjct: 389 VCGNNDDYRAAFSICMEHCHEAGVFTQKQALAYIGKSVKMVKKGPVAGPKRPLTEEALEV 448
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
L L+++P N + K IY AVM RR++ A+ N +DD+DYVGNKRLEL+GQL+SL
Sbjct: 449 LSTVVLAHVPADNLNLQPKAIYLAVMARRVVQAMANPKLVDDRDYVGNKRLELAGQLLSL 508
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L KP++ FD + H D I++G +STGN+ I+R
Sbjct: 509 LFEDLFKKFNTDLKLNIDKVLKKPNRTTEFDAINQFRMHADHISNGFIRAISTGNWSIKR 568
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEGE
Sbjct: 569 FKMERAGITHVLSRLSYISALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGE 628
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD +E P+ ++ Y +G ED+ ++G EL+ P ++V NG ILG
Sbjct: 629 ACGLVKNLALMTHITTDTDEEPIWNVAYTIGCEDISSVTGTELYLPRHYIVFINGNILGL 688
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FV R+ RRAGKI EFVS+Y+N Q V +A+DGGR+CRP++I NG S +K
Sbjct: 689 TRSPERFVEVFRQFRRAGKISEFVSIYMNADQQTVNIATDGGRICRPMIIVTNGDSMVKT 748
Query: 479 YHMKEL 484
+H+++L
Sbjct: 749 HHIEKL 754
>M9LWJ6_9BASI (tr|M9LWJ6) RNA polymerase III, second largest subunit
OS=Pseudozyma antarctica T-34 GN=PANT_12c00112 PE=4 SV=1
Length = 1158
Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/488 (51%), Positives = 332/488 (68%), Gaps = 6/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+PVMLRS +CVL K E ELAK+ ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ D
Sbjct: 159 IPVMLRSNKCVLANKSEKELAKMSECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVEADS 218
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ V+ K +++LK N + +P+ + KAMG+++D+E++Q+
Sbjct: 219 KKGTVSASVTSSTHERKSKSYVLTKHGRIFLKHNSLHEDIPIAIAFKAMGIQADREILQL 278
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y L + EE A+ GVYT++QAL + ++ K S S + AL V
Sbjct: 279 VAGHDDVYKELFAINLEEAARLGVYTRKQALDFIGARAKAS--RKPLSMRRPLAEEALDV 336
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
L ++++PV + NFR K IY A M+RR++ A+ ++ +DD+DYVGNKRLEL+GQL++L
Sbjct: 337 LATVIMAHVPVERLNFRPKAIYIACMVRRVLMAMQDEKKVDDRDYVGNKRLELAGQLLAL 396
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L KP++ FD + + D IT G +STGN+ ++R
Sbjct: 397 LFEDLFKKFNSDLKLNIDKILKKPNRTVEFDAFNQFHFNGDYITSGFVRAISTGNWSLKR 456
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEGE
Sbjct: 457 FKMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGE 516
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLAL TH+TTD EE P+ + + LGVED+ L+G EL+ PDSF+V NG +LG
Sbjct: 517 ACGLVKNLALTTHITTDVEEEPIARVAFTLGVEDIHLLTGAELYRPDSFVVYLNGNVLGV 576
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIAD--NGISRI 476
R P+ FV R+LRRAG+I EFVSVY N VY+ASDGGR+CRPL++ D G R+
Sbjct: 577 TRFPQRFVMQFRRLRRAGRISEFVSVYTNNHHQTVYIASDGGRICRPLIVVDAVTGQPRV 636
Query: 477 KEYHMKEL 484
E H+++L
Sbjct: 637 TEDHIRQL 644
>G8ZMQ3_TORDC (tr|G8ZMQ3) DNA-directed RNA polymerase OS=Torulaspora delbrueckii
(strain ATCC 10662 / CBS 1146 / NBRC 0425 / NCYC 2629 /
NRRL Y-866) GN=TDEL0A05650 PE=3 SV=1
Length = 1142
Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/488 (51%), Positives = 334/488 (68%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +C+L+E DEA +AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 148 MPVMLRSNKCILHESDEAMMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 207
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K EK++LK N A+ +P++VV+KA G+ SD EV+Q+
Sbjct: 208 KKAIVQASVTSSTHERKSKTYVVTKNEKIYLKHNSIAEDIPIVVVLKACGIVSDLEVMQL 267
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE A+ +YTQ+QAL ++ SKVK +S +EG ++
Sbjct: 268 VCGNDSSYQDIFAINLEEAAKLNLYTQQQALEYIGSKVKTVRRQKLSVLQEG-----IEA 322
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ AI N +DD+DYVGNKRLEL+GQLISL
Sbjct: 323 IATTVIAHLTVEALDFREKALYIAIMTRRVVMAIYNPKMVDDRDYVGNKRLELAGQLISL 382
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 383 LFEDLFKKFNSDFKASIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKR 442
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 443 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 502
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ LCY LGVED+ L LH ++ V NG ++G
Sbjct: 503 ACGLVKNLALMTHITTDDEEEPIKKLCYLLGVEDISLLDSASLHL--NYGVHLNGTLIGT 560
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
+ P F+T R LRR+ K+ F+S+Y N Q V++A+DGGR+CRPL+I +G SR+K
Sbjct: 561 TKYPTKFITHFRNLRRSSKVSAFISIYANSHQKAVHIATDGGRICRPLIIVSDGQSRVKA 620
Query: 479 YHMKELMD 486
H+K+L+D
Sbjct: 621 DHLKKLLD 628
>I4YBN3_WALSC (tr|I4YBN3) DNA-directed RNA polymerase OS=Wallemia sebi (strain
ATCC MYA-4683 / CBS 633.66) GN=WALSEDRAFT_60553 PE=3
SV=1
Length = 1152
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/486 (50%), Positives = 333/486 (68%), Gaps = 2/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+PVMLRS +C+L KDE LA+ ECPLDPGGYFV+KG EKVIL+QEQLSKNR+II D
Sbjct: 150 LPVMLRSNKCILSGKDEETLARYRECPLDPGGYFVVKGTEKVILVQEQLSKNRMIIETDP 209
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+N+ + + K++L+ N VP++V +KAMG+ SD+E++Q+V
Sbjct: 210 KKNVQASVTSSTHERKSKSYVATKNGKIYLRHNSIGDDVPIVVALKAMGVTSDKEILQLV 269
Query: 121 -GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFS-NISSEKEGRGSPALKV 178
G D Y + + EE + G++T+ QAL + ++ K + + + +K A++
Sbjct: 270 AGHDDEYKEVFYINIEEALRMGIHTEMQALEWIGARSKSARRAVGPAHQKRPVWEDAIET 329
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
L L+++PV NFR K IY AVM+RR++ A++++ +DD+DYVGNKRLEL+GQL+SL
Sbjct: 330 LSTIVLAHVPVENLNFRPKAIYVAVMVRRVLMAMVDEKMLDDRDYVGNKRLELAGQLLSL 389
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L KP++ FD + L D IT G +STGN+ ++R
Sbjct: 390 LFEDLFKKFNHDLKLNIDKVLKKPNRTTEFDAYTQLLYGGDHITSGFVRAISTGNWSLKR 449
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEGE
Sbjct: 450 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGE 509
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD EE P++++CY LGVED+ L+G EL+ D+++V NG ++G
Sbjct: 510 ACGLVKNLALMTHITTDVEEEPIVNICYMLGVEDVCLLTGTELYRRDTYIVSLNGNLIGV 569
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FVT RKLRR G I EFVSVY+N V ++SDGGR+CRP++I +N S++
Sbjct: 570 TRHPLKFVTQFRKLRRNGFINEFVSVYINHHHNSVNISSDGGRICRPMIIVENSFSKVTS 629
Query: 479 YHMKEL 484
H+K L
Sbjct: 630 EHIKML 635
>A8PVW9_MALGO (tr|A8PVW9) DNA-directed RNA polymerase OS=Malassezia globosa
(strain ATCC MYA-4612 / CBS 7966) GN=MGL_0974 PE=3 SV=1
Length = 1131
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/489 (48%), Positives = 340/489 (69%), Gaps = 10/489 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +C L +DEA LA++ ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ D
Sbjct: 131 LPIMLRSNKCWLAGQDEATLARMNECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVEADS 190
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKM-WLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ + V+ K + ++K N + +P++VV +AMG++SD+E++Q+
Sbjct: 191 RKEVVQASVTSSTHERKSKSYVLTKHGLIYVKHNSLNEDIPIVVVFRAMGIQSDKEILQL 250
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G+D Y+ L + E A+ G++T++QAL ++ ++VK R + ++ E A
Sbjct: 251 VAGQDETYAELFSINLERAAKLGIFTRQQALDYMGARVKIMRRGVGMRRTASDE-----A 305
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
L+VL ++++PV QG+FR K +Y A M+RR++ ++++ +DD+DYVGNKRLEL+GQL
Sbjct: 306 LEVLATVIMAHVPVEQGDFRNKTMYIATMVRRVLVCMVDESKVDDRDYVGNKRLELAGQL 365
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
++LLFED FK ++ + DK+L KP++ + FD + H D IT G +STGN+
Sbjct: 366 LALLFEDLFKKFNFDLKTNIDKVLKKPNRTSEFDAYNQFFYHGDYITAGFVRAISTGNWS 425
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTP
Sbjct: 426 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTP 485
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTD +EAP++ LCY LG+ED+ L+G EL+ P +++V NG +
Sbjct: 486 EGEACGLVKNLALMTHITTDVDEAPIVRLCYALGLEDINLLTGAELYQPSTYIVFLNGNV 545
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISR 475
+G P FV R+LRRAG I EFV +Y N V +ASDGGR+CRP++I +NG +
Sbjct: 546 VGVTLTPHRFVAQFRRLRRAGLISEFVGIYTNTHHQTVNIASDGGRICRPMIIVENGRPQ 605
Query: 476 IKEYHMKEL 484
+ H+++L
Sbjct: 606 VTSEHIRQL 614
>J3Q2I0_PUCT1 (tr|J3Q2I0) DNA-directed RNA polymerase OS=Puccinia triticina
(isolate 1-1 / race 1 (BBBD)) GN=PTTG_05596 PE=3 SV=1
Length = 1221
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/486 (50%), Positives = 328/486 (67%), Gaps = 2/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +CVL K +AELAK+ ECPLDPGGYFV+KG EKVIL+QEQLSKNRI+I D
Sbjct: 237 IPIMLRSNKCVLTGKSDAELAKMTECPLDPGGYFVVKGTEKVILVQEQLSKNRILIETDS 296
Query: 61 NR-NIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I +V + K++LK N +++P+ + +KA G+ SD+EVVQ+
Sbjct: 297 RKGTIMASVTSSTHERKSKTYVVTKNSKIYLKHNSIQEEIPIAIALKAYGITSDREVVQI 356
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G + Y E C + GV+TQ+QALA++ VK ++ K AL+V
Sbjct: 357 VCGNNDDYRAAFSICMEHCHEAGVFTQKQALAYIGKSVKIIKKGPVAGPKRPLTEEALEV 416
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
L L+++P N + K IY AVM RR++ A+ N +DD+DYVGNKRLEL+GQL+SL
Sbjct: 417 LSTVVLAHVPADNLNLQPKAIYLAVMARRVVQAMANPKLVDDRDYVGNKRLELAGQLLSL 476
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L KP++ FD + H D I++G +STGN+ I+R
Sbjct: 477 LFEDLFKKFNTDLKLNIDKVLKKPNRTTEFDAINQFRMHADHISNGFIRAISTGNWSIKR 536
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEGE
Sbjct: 537 FKMERAGITHVLSRLSYISALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGE 596
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD +E P+ ++ Y +G ED+ ++G EL+ P ++V NG ILG
Sbjct: 597 ACGLVKNLALMTHITTDTDEEPIWNVAYTIGCEDISSVTGTELYLPRHYIVFINGNILGL 656
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FV R+ RRAGKI EFVS+Y+N Q V +A+DGGR+CRP++I G S +K
Sbjct: 657 TRSPERFVEVFRQFRRAGKISEFVSIYMNADQQTVNIATDGGRICRPMIIVSRGDSMVKT 716
Query: 479 YHMKEL 484
+H+++L
Sbjct: 717 HHIEKL 722
>I0Z7N1_9CHLO (tr|I0Z7N1) DNA-directed RNA polymerase OS=Coccomyxa subellipsoidea
C-169 GN=COCSUDRAFT_52414 PE=3 SV=1
Length = 1170
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/485 (52%), Positives = 342/485 (70%), Gaps = 5/485 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS RCVL K EA+LA+LGECPLDPGGYFV+KG EKVILIQEQLSKNRIII +D
Sbjct: 159 MPLMLRSDRCVLKGKSEAQLAELGECPLDPGGYFVVKGAEKVILIQEQLSKNRIIIDLDS 218
Query: 61 NRNIXXXXXXXXXXXXXXXDIVM-EKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ +IV+ K ++ L+ N F + V ++ V++AMG+ESDQE++ +
Sbjct: 219 KGQVTASVTSSTHERKSKTNIVLGRKGQLCLRHNAFTEDVNMVAVLRAMGVESDQEILAL 278
Query: 120 VGRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVL 179
VG +P + LL P+ +E G++ ++QAL +L S+VK S + A +L
Sbjct: 279 VGCEPGLAALLAPTLQEAKAMGLFIRQQALEYLGSRVKAGKQQYSSRRSRSKVDEARDIL 338
Query: 180 EEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLL 239
+ +IPV Q +F+ K IY AVMMRR++ A+L+ +DD+DY GNKRLEL+G L++LL
Sbjct: 339 ANVVVCHIPVPQYDFQQKVIYMAVMMRRMIAAMLDSTLIDDRDYYGNKRLELAGGLLALL 398
Query: 240 FEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRF 299
FED FK M +++ ++D L K ++A++FD + L H ++I+ G+ES +S+GN+ IRRF
Sbjct: 399 FEDLFKRMNNELKRTADNTLSKANRASQFDAAKNL--HVEMISQGMESAISSGNWTIRRF 456
Query: 300 RMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEA 359
RMERKG+TQVL RLSFI LG MTR++ QFEK+RKVSGPRALQPSQWGMLCP DTPEGE+
Sbjct: 457 RMERKGVTQVLSRLSFIAALGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPADTPEGES 516
Query: 360 CGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKH 419
CGLVKNLALMTHVTTDEEEAPL L + LG + +SG E + +V NG ILG H
Sbjct: 517 CGLVKNLALMTHVTTDEEEAPLARLAHLLGTQPATLVSGFEYSSRGVAMVFLNGSILGIH 576
Query: 420 RRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEY 479
RRP+ V R+LRRAG++GEFVS+++ +Q VY+ASDGGRVCRPL+I D G+ R+
Sbjct: 577 RRPKRLVKEFRRLRRAGRVGEFVSIFL--QQDSVYIASDGGRVCRPLIICDRGVPRVTSA 634
Query: 480 HMKEL 484
H +L
Sbjct: 635 HTAKL 639
>I2FM84_USTH4 (tr|I2FM84) DNA-directed RNA polymerase OS=Ustilago hordei (strain
Uh4875-4) GN=UHOR_04019 PE=3 SV=1
Length = 1169
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 251/493 (50%), Positives = 334/493 (67%), Gaps = 16/493 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+PVMLRS +CVL K E ELAK+ ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ D
Sbjct: 159 IPVMLRSNKCVLSNKSEKELAKMSECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVEADT 218
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ V+ K K++LK N + +P+ V KAMG+++D+E++Q+
Sbjct: 219 KKGSVSASVTSSTHERKSKSYVLTKHGKIFLKHNSLHEDIPIAVAFKAMGIQADREILQL 278
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRS-----MFSNISSEKEGRGS 173
V G D Y L + EE A+ G+YT++QAL ++ ++ K S M +S E
Sbjct: 279 VVGHDDIYKELFAINLEEAARLGIYTRKQALDYIGARAKASRKPLSMRRPLSEE------ 332
Query: 174 PALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSG 233
AL VL ++++PV + NFR K IY A M+RR++ A+ ++ +DD+DYVGNKRLEL+G
Sbjct: 333 -ALDVLATVIMAHVPVERLNFRPKAIYIASMVRRVLVAMQDEKKVDDRDYVGNKRLELAG 391
Query: 234 QLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGN 293
QL++LLFED FK ++ + DK+L KP++ FD + + D IT G +STGN
Sbjct: 392 QLLALLFEDLFKKFNSDLKINIDKVLKKPNRTVEFDAFNQFHFNGDYITAGFVRAISTGN 451
Query: 294 FEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCD 353
+ ++RF+MER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP D
Sbjct: 452 WSLKRFKMERAGITHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSD 511
Query: 354 TPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNG 413
TPEGEACGLVKNLAL TH+TTD EE P+ L + LGVED+ L+G EL+ PDS++V NG
Sbjct: 512 TPEGEACGLVKNLALTTHITTDVEEEPIAKLAFTLGVEDVHLLTGAELYRPDSYIVYLNG 571
Query: 414 LILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIAD--N 471
+LG R P+ FV R+LRRAG I EFVS+Y N VY+ASDGGR+CRPL+I D
Sbjct: 572 NVLGVTRFPQRFVMQFRRLRRAGHISEFVSIYTNSHHQTVYIASDGGRICRPLIIVDPVT 631
Query: 472 GISRIKEYHMKEL 484
G R+ + H+++L
Sbjct: 632 GQPRVTDSHIQQL 644
>Q6CEE6_YARLI (tr|Q6CEE6) DNA-directed RNA polymerase OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=YALI0B16258g PE=3 SV=1
Length = 1169
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/488 (48%), Positives = 338/488 (69%), Gaps = 5/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C L ++ E ++A +GECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 159 MPIMLRSSKCHLQDQTEEKMAAMGECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 218
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ + V+ K +K++LK N + +P+++++KA G+ +D E++Q
Sbjct: 219 KKGVVQASVTSSTHERRSKTYVLTKNDKIYLKNNSIVEDIPIVLILKAAGLVTDLEIMQA 278
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G++P Y + +FEEC++ GV+TQ QAL +L SKVK S SN+ G L+
Sbjct: 279 VAGQNPVYQEIFAVNFEECSKLGVFTQRQALEYLGSKVKTSRRSNVKLTHYQEG---LEA 335
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +++I ++ +F K +Y AVM RR++ A+ + +DD+DYVGNKRLEL+GQL+SL
Sbjct: 336 VATSIIAHISINNMDFTEKALYIAVMTRRVIMAMADPKMIDDRDYVGNKRLELAGQLLSL 395
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + + DK+L +P++A+ FD L H+ IT G+ +STGN+ ++R
Sbjct: 396 LFEDLFKKFNSDFKANIDKILKRPNRASMFDALLNLETHRGSITSGMNRAISTGNWSLKR 455
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 456 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTSDTPEGE 515
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EEAP+ +LCY LG E++ + G ELH SF V NG ++G
Sbjct: 516 ACGLVKNLALMTHITTDDEEAPVRNLCYLLGAENISVIGGAELHAEGSFGVYLNGTLIGI 575
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
+ P FV++ R+ RR GK+ EF+S+Y+N V++A+DGGR+CRPL+I +N R++
Sbjct: 576 TKFPTKFVSSFRQFRRTGKVSEFISIYINRHHAAVHIATDGGRICRPLIIVENEHPRVQV 635
Query: 479 YHMKELMD 486
H+K+L D
Sbjct: 636 EHLKKLRD 643
>R7TT13_9ANNE (tr|R7TT13) Uncharacterized protein OS=Capitella teleta
GN=CAPTEDRAFT_178602 PE=4 SV=1
Length = 1134
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 248/484 (51%), Positives = 335/484 (69%), Gaps = 4/484 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AELAKL ECP+DPGGYF+++G EKVILIQEQLSKNR+I+ DK
Sbjct: 132 MPIMLRSSNCVLVGKVPAELAKLQECPIDPGGYFIVRGVEKVILIQEQLSKNRMIVDTDK 191
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
N +++M+ K +++ N ++ +P+ + +KAMG+ESDQE+VQMV
Sbjct: 192 KGNAMCSVTSSTHERKSKTNVIMKHHKYYIQHNTLSEDLPIAIALKAMGIESDQEIVQMV 251
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + + P EEC + VYTQ QAL ++ KV++ K+ + A ++L+
Sbjct: 252 GSEEMVLAAMAPCLEECHRAQVYTQVQALKYMGGKVRQRRIWG-GGAKKSKAEEARELLQ 310
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
++++PV NF++K Y A+M+RR + A N +DD+DYVGNKRLEL+GQL+SLLF
Sbjct: 311 GTIIAHVPVTNWNFKVKASYTALMLRRCILAQGNTMNVDDRDYVGNKRLELAGQLLSLLF 370
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D + KP +A +FDI V QD IT+GL +S+GN+ I+RF+
Sbjct: 371 EDLFKKFNSELKRIADMTIPKP-RAAQFDI--VKHMRQDQITNGLTHAISSGNWSIKRFK 427
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLSFI LG MTR++ QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 428 MDRQGVTQVLSRLSFISALGHMTRITSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 487
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTHVTTD E +I L + LGVED+ +LSG+EL +P +LV+ NG ILG R
Sbjct: 488 GLVKNLALMTHVTTDLPEESIIRLAHNLGVEDIHFLSGDELTSPLIYLVLLNGNILGVIR 547
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
R V R++RRAG + EFVS+ N V++ASDGGRVCRP +I +NG R+K+ H
Sbjct: 548 EYRRLVRTFRRMRRAGYVSEFVSISPNHAHRVVHIASDGGRVCRPYIIVENGEPRVKDRH 607
Query: 481 MKEL 484
++EL
Sbjct: 608 IQEL 611
>M2QDB1_CERSU (tr|M2QDB1) DNA-directed RNA polymerase OS=Ceriporiopsis
subvermispora B GN=CERSUDRAFT_116535 PE=3 SV=1
Length = 1145
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 239/487 (49%), Positives = 333/487 (68%), Gaps = 5/487 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +CVL + EA+LA++ ECPLDPGGYF++KG EKVIL+QEQLSKNRII+ +D
Sbjct: 146 IPIMLRSNKCVLTGRTEAQLARMTECPLDPGGYFIVKGTEKVILVQEQLSKNRIIVEIDP 205
Query: 61 NRNIXXXXXXXXXXXXXXXD--IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQ 118
+ I + +K K++L+ N + VP+++ +KA+G++SD+E++
Sbjct: 206 TKGIVQASCTSSTHGGLKSKTYVATKKGKIYLRHNSIHEDVPIVIALKALGIQSDKEILL 265
Query: 119 MV-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALK 177
+ G Y P+ EE A+ GVYT+ QAL ++ S+VK + + + AL+
Sbjct: 266 LTAGNHEAYKSAFSPNLEEAAKLGVYTRHQALEYIGSRVKVN--RKVVGPRRPAWEEALE 323
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
L L+++PVH +FR K I+ A M RR++ A+ ++ +DD+DYVGNKRLEL+GQL++
Sbjct: 324 ALATIVLAHVPVHGLDFRSKAIFVATMTRRVLMAMDDEKMVDDRDYVGNKRLELAGQLLA 383
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FKT ++++ DK+L KP + + FD + + D IT G +STGN+ ++
Sbjct: 384 LLFEDLFKTFNANLKSAIDKVLKKPSRTSEFDAFNTMQFQGDHITSGFVRAISTGNWSLK 443
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RF+M+R G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEG
Sbjct: 444 RFKMDRAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEG 503
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TTD EE P+I + + LGVED+ +G E++ P++F+V NG I+G
Sbjct: 504 EACGLVKNLALMTHITTDVEEEPIIRIAFMLGVEDISVATGTEIYGPNTFVVNVNGTIIG 563
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
R P FVT RKLRRAG+ EFVS Y+N V +ASDGGR+CRP++I +NG R+
Sbjct: 564 LTRYPARFVTNFRKLRRAGRFSEFVSAYINHHHRTVLIASDGGRICRPMIIVENGRPRVT 623
Query: 478 EYHMKEL 484
H +L
Sbjct: 624 SDHTLQL 630
>R4XFH8_9ASCO (tr|R4XFH8) DNA-directed RNA polymerase OS=Taphrina deformans PYCC
5710 GN=TAPDE_003395 PE=4 SV=1
Length = 1176
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/478 (51%), Positives = 335/478 (70%), Gaps = 4/478 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS C+L K EA++A++ ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ ++
Sbjct: 173 MPIMLRSDHCILKNKSEADMAQMLECPLDPGGYFVVKGTEKVILVQEQLSKNRIIV--EE 230
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K+ K+++K N ++ +P+++ +KAMG++SDQE+ Q+
Sbjct: 231 YKGIIQASVTSSTHERKSKSYVLTKKGKIYMKHNSISEDIPIVLALKAMGVQSDQEIFQL 290
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G DP Y + + EECA+ +YTQ QAL ++ SK + + + + G AL+V
Sbjct: 291 VCGADPVYQDIFAINLEECAKMKIYTQAQALDYIGSKCRINRKAPGQGPRRPLGEEALEV 350
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
L L+++PV +FR K +Y A+M RR++ A+ N +DD+DYVGNKRLEL+GQL+SL
Sbjct: 351 LASIVLAHVPVEGLDFRPKVVYFAMMTRRVLMAMANPKMVDDRDYVGNKRLELAGQLLSL 410
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FKT +Q + + DK+L KP++ FD + H D IT+G+ LSTGN+ ++R
Sbjct: 411 LFEDLFKTFNQQFKLNIDKVLKKPNRTQEFDAFNQFHIHGDHITNGMIRALSTGNWSLKR 470
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 471 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCTSDTPEGE 530
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+I L + LGVED+ ++G EL+ S ++ NG ILG
Sbjct: 531 ACGLVKNLALMTHITTDDEEEPIIKLIFALGVEDITMVTGHELYAEGSHVIYMNGTILGV 590
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRI 476
R P FV R++RRAGK+ EFVS+++N V++ASDGGRVCRPL+I + G R+
Sbjct: 591 TRFPVKFVNNFRRMRRAGKVSEFVSIHINNHHAAVHIASDGGRVCRPLLIVEKGRCRV 648
>M5FVM7_DACSP (tr|M5FVM7) Subunit of DNA dependent RNA-polymerase OS=Dacryopinax
sp. (strain DJM 731) GN=DACRYDRAFT_54480 PE=4 SV=1
Length = 1151
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/495 (48%), Positives = 342/495 (69%), Gaps = 11/495 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +CVL K EAELA++ ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ D
Sbjct: 135 LPIMLRSNKCVLTGKSEAELARMQECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVETDP 194
Query: 61 NRNIXXXXXXXXXXXXXXXDIVM-EKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
++ + V+ +K K++LK N + +P+ +V+KA+G++SD+E++Q+
Sbjct: 195 SKGVVMASVTSSTHERKSKTYVLTKKNKIYLKHNSVTEDIPICIVLKAVGVQSDKEILQL 254
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSP---- 174
V G + Y + E+ A+ GV+TQ QAL ++ S+VK + + G P
Sbjct: 255 VCGHNEEYRESFAANLEDAARLGVFTQRQALEYMGSRVKVNRPRPFGAPLAGTQGPRRPA 314
Query: 175 ---ALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLEL 231
A++ L L+++ + +FR K +Y AVM+RR++ A+ ++ +DD+DYVGNKRLEL
Sbjct: 315 WEEAMEALATIVLAHVEMEGLDFRPKAVYIAVMVRRVLMAMKDEKLVDDRDYVGNKRLEL 374
Query: 232 SGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARH--QDLITHGLESTL 289
+GQL++LLFED FK + ++ + DK+L KP + +D+ L H + IT G +
Sbjct: 375 AGQLLALLFEDLFKKFNQDLKMNIDKVLKKPSRTEEYDVIKALTFHAQSEGITQGFIRAI 434
Query: 290 STGNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGML 349
STGN+ ++RF+M+R G+T VL RLSF+ LG MTR++ QFEK+RKVSGPRALQPSQWGML
Sbjct: 435 STGNWSLKRFKMDRAGVTHVLSRLSFVSALGMMTRITSQFEKTRKVSGPRALQPSQWGML 494
Query: 350 CPCDTPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLV 409
CP DTPEGEACGLVKNLALMTH+TTD EE P++ + + LGVED+ +G E+H PD+F+V
Sbjct: 495 CPSDTPEGEACGLVKNLALMTHITTDVEEEPIVRVAFMLGVEDINLATGPEIHHPDTFMV 554
Query: 410 IFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIA 469
NG I+G R+P FV A+RKLRRAG+I EFVSVY+N V++A+DGGR+CRP++I
Sbjct: 555 NVNGSIIGLTRQPGRFVVALRKLRRAGRISEFVSVYINHHHKTVHIAADGGRICRPMIIV 614
Query: 470 DNGISRIKEYHMKEL 484
+ G R+ E H+K L
Sbjct: 615 EKGRPRVTEDHIKLL 629
>G1KR53_ANOCA (tr|G1KR53) DNA-directed RNA polymerase OS=Anolis carolinensis
GN=polr3b PE=3 SV=1
Length = 1132
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 248/484 (51%), Positives = 331/484 (68%), Gaps = 6/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ +I +++ + +LK N ++ +P+ ++ KAMG+ESDQE+VQM+
Sbjct: 196 KGTVGASVTSSTHEKKSRTNITVKQGRFYLKHNTLSEDIPIAIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL +L +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFAPSLEECQKAQIFTQMQALKYLGNKVRRQRM--WGGPKKTKMEEARELLA 313
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 314 TTILAHVPVKEFNFRSKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 372
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 373 EDLFKKFNSELKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 429
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 430 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 489
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P+I L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 490 GLVKNLALMTHITTDMEDGPIIKLAGNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 549
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + E H
Sbjct: 550 DHQKLVYTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQTPAVTEKH 609
Query: 481 MKEL 484
M+EL
Sbjct: 610 MEEL 613
>F1QQA2_DANRE (tr|F1QQA2) DNA-directed RNA polymerase (Fragment) OS=Danio rerio
GN=polr3b PE=3 SV=1
Length = 1129
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 246/484 (50%), Positives = 331/484 (68%), Gaps = 10/484 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K E +KL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPMEFSKLNECPLDPGGYFIVKGQEKVILIQEQLSKNRIIVDQDR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++++++ + +LK N ++ P+ ++ KAMG+ESDQE+VQM+
Sbjct: 196 KGTVGASVTSSTHEKKSRTNMIVKQGRFYLKHNTLSEDAPIAIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R G+ A ++L
Sbjct: 256 GTEEHVMAAFAPSLEECQKAQIFTQTQALRYIGNKVRRQRMWG------GQMEEARELLA 309
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 310 STILTHVPVKEFNFRAKCIYLAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 368
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 369 EDLFKKFNSELKKIADQIIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 425
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLSFI LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 426 MDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 485
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P+I L + LGVED+ L GEEL P FLV NG ILG R
Sbjct: 486 GLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPTVFLVFLNGNILGVIR 545
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I NG +K H
Sbjct: 546 DHQKLVYTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKNGKPAVKNKH 605
Query: 481 MKEL 484
++EL
Sbjct: 606 IEEL 609
>N1NX57_YEASX (tr|N1NX57) Ret1p OS=Saccharomyces cerevisiae CEN.PK113-7D
GN=CENPK1137D_2223 PE=4 SV=1
Length = 1149
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/488 (49%), Positives = 336/488 (68%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+LY+ DE+++AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 152 MPIMLRSNKCILYDADESKMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 211
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K K++LK N A+++P+ +V+KA G+ SD E++Q+
Sbjct: 212 KKGIVQASVTSSTHERKSKTYVITKNGKIYLKHNSIAEEIPIAIVLKACGILSDLEIMQL 271
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE ++ +YTQ+QAL ++ +KVK ++ +EG ++
Sbjct: 272 VCGNDSSYQDIFAVNLEESSKLDIYTQQQALEYIGAKVKTMRRQKLTILQEG-----IEA 326
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ A+ N +DD+DYVGNKRLEL+GQLISL
Sbjct: 327 IATTVIAHLTVEALDFREKALYIAMMTRRVVMAMYNPKMIDDRDYVGNKRLELAGQLISL 386
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 387 LFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKR 446
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 447 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 506
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ LCY LGVED+ + LH ++ V NG ++G
Sbjct: 507 ACGLVKNLALMTHITTDDEEEPIKKLCYVLGVEDITLIDSASLHL--NYGVYLNGTLIGS 564
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FVT R LRR GK+ EF+S+Y N Q V++A+DGGR+CRPL+I +G SR+K+
Sbjct: 565 IRFPTKFVTQFRHLRRTGKVSEFISIYSNSHQMAVHIATDGGRICRPLIIVSDGQSRVKD 624
Query: 479 YHMKELMD 486
H+++L+D
Sbjct: 625 IHLRKLLD 632
>C8ZGW3_YEAS8 (tr|C8ZGW3) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse)
GN=EC1118_1O4_4313g PE=3 SV=1
Length = 1149
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/488 (49%), Positives = 336/488 (68%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+LY+ DE+++AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 152 MPIMLRSNKCILYDADESKMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 211
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K K++LK N A+++P+ +V+KA G+ SD E++Q+
Sbjct: 212 KKGIVQASVTSSTHERKSKTYVITKNGKIYLKHNSIAEEIPIAIVLKACGILSDLEIMQL 271
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE ++ +YTQ+QAL ++ +KVK ++ +EG ++
Sbjct: 272 VCGNDSSYQDIFAVNLEESSKLDIYTQQQALEYIGAKVKTMRRQKLTILQEG-----IEA 326
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ A+ N +DD+DYVGNKRLEL+GQLISL
Sbjct: 327 IATTVIAHLTVEALDFREKALYIAMMTRRVVMAMYNPKMIDDRDYVGNKRLELAGQLISL 386
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 387 LFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKR 446
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 447 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 506
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ LCY LGVED+ + LH ++ V NG ++G
Sbjct: 507 ACGLVKNLALMTHITTDDEEEPIKKLCYVLGVEDITLIDSASLHL--NYGVYLNGTLIGS 564
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FVT R LRR GK+ EF+S+Y N Q V++A+DGGR+CRPL+I +G SR+K+
Sbjct: 565 IRFPTKFVTQFRHLRRTGKVSEFISIYSNSHQMAVHIATDGGRICRPLIIVSDGQSRVKD 624
Query: 479 YHMKELMD 486
H+++L+D
Sbjct: 625 IHLRKLLD 632
>C7GWH5_YEAS2 (tr|C7GWH5) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain JAY291) GN=RET1 PE=3 SV=1
Length = 1149
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/488 (49%), Positives = 336/488 (68%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+LY+ DE+++AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 152 MPIMLRSNKCILYDADESKMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 211
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K K++LK N A+++P+ +V+KA G+ SD E++Q+
Sbjct: 212 KKGIVQASVTSSTHERKSKTYVITKNGKIYLKHNSIAEEIPIAIVLKACGILSDLEIMQL 271
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE ++ +YTQ+QAL ++ +KVK ++ +EG ++
Sbjct: 272 VCGNDSSYQDIFAVNLEESSKLDIYTQQQALEYIGAKVKTMRRQKLTILQEG-----IEA 326
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ A+ N +DD+DYVGNKRLEL+GQLISL
Sbjct: 327 IATTVIAHLTVEALDFREKALYIAMMTRRVVMAMYNPKMIDDRDYVGNKRLELAGQLISL 386
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 387 LFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKR 446
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 447 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 506
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ LCY LGVED+ + LH ++ V NG ++G
Sbjct: 507 ACGLVKNLALMTHITTDDEEEPIKKLCYVLGVEDITLIDSASLHL--NYGVYLNGTLIGS 564
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FVT R LRR GK+ EF+S+Y N Q V++A+DGGR+CRPL+I +G SR+K+
Sbjct: 565 IRFPTKFVTQFRHLRRTGKVSEFISIYSNSHQMAVHIATDGGRICRPLIIVSDGQSRVKD 624
Query: 479 YHMKELMD 486
H+++L+D
Sbjct: 625 IHLRKLLD 632
>A6ZP50_YEAS7 (tr|A6ZP50) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain YJM789) GN=RET1 PE=3 SV=1
Length = 1149
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/488 (49%), Positives = 336/488 (68%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+LY+ DE+++AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 152 MPIMLRSNKCILYDADESKMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 211
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K K++LK N A+++P+ +V+KA G+ SD E++Q+
Sbjct: 212 KKGIVQASVTSSTHERKSKTYVITKNGKIYLKHNSIAEEIPIAIVLKACGILSDLEIMQL 271
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE ++ +YTQ+QAL ++ +KVK ++ +EG ++
Sbjct: 272 VCGNDSSYQDIFAVNLEESSKLDIYTQQQALEYIGAKVKTMRRQKLTILQEG-----IEA 326
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ A+ N +DD+DYVGNKRLEL+GQLISL
Sbjct: 327 IATTVIAHLTVEALDFREKALYIAMMTRRVVMAMYNPKMIDDRDYVGNKRLELAGQLISL 386
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 387 LFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKR 446
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 447 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 506
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ LCY LGVED+ + LH ++ V NG ++G
Sbjct: 507 ACGLVKNLALMTHITTDDEEEPIKKLCYVLGVEDITLIDSASLHL--NYGVYLNGTLIGS 564
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FVT R LRR GK+ EF+S+Y N Q V++A+DGGR+CRPL+I +G SR+K+
Sbjct: 565 IRFPTKFVTQFRHLRRTGKVSEFISIYSNSHQMAVHIATDGGRICRPLIIVSDGQSRVKD 624
Query: 479 YHMKELMD 486
H+++L+D
Sbjct: 625 IHLRKLLD 632
>G2WN79_YEASK (tr|G2WN79) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain Kyokai no. 7 / NBRC 101557) GN=K7_RET1 PE=3 SV=1
Length = 1149
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/488 (49%), Positives = 336/488 (68%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+LY+ DE+++AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 152 MPIMLRSNKCILYDADESKMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 211
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K K++LK N A+++P+ +V+KA G+ SD E++Q+
Sbjct: 212 KKGIVQASVTSSTHERKSKTYVITKNGKIYLKHNSIAEEIPIAIVLKACGILSDLEIMQL 271
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE ++ +YTQ+QAL ++ +KVK ++ +EG ++
Sbjct: 272 VCGNDSSYQDIFAVNLEESSKLDIYTQQQALEYIGAKVKTMRRQKLTILQEG-----IEA 326
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ A+ N +DD+DYVGNKRLEL+GQLISL
Sbjct: 327 IATTVIAHLTVEALDFREKALYIAMMTRRVVMAMYNPKMIDDRDYVGNKRLELAGQLISL 386
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 387 LFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKR 446
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 447 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 506
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ LCY LGVED+ + LH ++ V NG ++G
Sbjct: 507 ACGLVKNLALMTHITTDDEEEPIKKLCYVLGVEDITLIDSASLHL--NYGVYLNGTLIGS 564
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FVT R LRR GK+ EF+S+Y N Q V++A+DGGR+CRPL+I +G SR+K+
Sbjct: 565 IRFPTKFVTQFRHLRRTGKVSEFISIYSNSHQMAVHIATDGGRICRPLIIVSDGQSRVKD 624
Query: 479 YHMKELMD 486
H+++L+D
Sbjct: 625 IHLRKLLD 632
>E7Q9A6_YEASB (tr|E7Q9A6) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain FostersB) GN=FOSTERSB_4499 PE=3 SV=1
Length = 1149
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/488 (49%), Positives = 336/488 (68%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+LY+ DE+++AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 152 MPIMLRSNKCILYDADESKMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 211
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K K++LK N A+++P+ +V+KA G+ SD E++Q+
Sbjct: 212 KKGIVQASVTSSTHERKSKTYVITKNGKIYLKHNSIAEEIPIAIVLKACGILSDLEIMQL 271
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE ++ +YTQ+QAL ++ +KVK ++ +EG ++
Sbjct: 272 VCGNDSSYQDIFAVNLEESSKLDIYTQQQALEYIGAKVKTMRRQKLTILQEG-----IEA 326
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ A+ N +DD+DYVGNKRLEL+GQLISL
Sbjct: 327 IATTVIAHLTVEALDFREKALYIAMMTRRVVMAMYNPKMIDDRDYVGNKRLELAGQLISL 386
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 387 LFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKR 446
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 447 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 506
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ LCY LGVED+ + LH ++ V NG ++G
Sbjct: 507 ACGLVKNLALMTHITTDDEEEPIKKLCYVLGVEDITLIDSASLHL--NYGVYLNGTLIGS 564
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FVT R LRR GK+ EF+S+Y N Q V++A+DGGR+CRPL+I +G SR+K+
Sbjct: 565 IRFPTKFVTQFRHLRRTGKVSEFISIYSNSHQMAVHIATDGGRICRPLIIVSDGQSRVKD 624
Query: 479 YHMKELMD 486
H+++L+D
Sbjct: 625 IHLRKLLD 632
>K0KLK2_WICCF (tr|K0KLK2) DNA-directed RNA polymerase OS=Wickerhamomyces ciferrii
(strain F-60-10 / ATCC 14091 / CBS 111 / JCM 3599 / NBRC
0793 / NRRL Y-1031) GN=RPC2 PE=3 SV=1
Length = 1152
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/486 (50%), Positives = 337/486 (69%), Gaps = 9/486 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L EA++A L ECPLDPGGYF++ G EKVILIQEQLSKNRII+ D+
Sbjct: 160 MPIMLRSNKCILDGASEAKMASLNECPLDPGGYFIVNGTEKVILIQEQLSKNRIIVEADE 219
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K +K++LK N +++VP+++V+KA G+ SD E++Q+
Sbjct: 220 KKQIVQASVTSSTHERKSKTYVVTKNDKIYLKHNSISEEVPIVIVLKAAGIISDLEIMQL 279
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEECA+ G+YTQ+QAL + +KVK + +S +EG ++
Sbjct: 280 VCGDDAAYQDSFAINFEECAKVGIYTQQQALEFIGAKVKTMRRAKLSILQEG-----IEA 334
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V+ +FR K +Y A+M RR++ A+ N +DD+DYVGNKRLEL+GQL+SL
Sbjct: 335 IATTVIAHLTVNDLDFREKALYIALMTRRVVMAMHNPKMVDDRDYVGNKRLELAGQLMSL 394
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + + DK+L KP++A FD + H + IT GL +STGN+ ++R
Sbjct: 395 LFEDLFKKFNTDFKANIDKILRKPNRATEFDALLNINIHSNNITTGLNRAISTGNWSLKR 454
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 455 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTSDTPEGE 514
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ LCY +GVE++ + LH D+F V NG I+G
Sbjct: 515 ACGLVKNLALMTHITTDDEEEPIKKLCYLIGVEEISVIDSASLH--DNFGVYLNGTIIGT 572
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FV+ R LRR GK+ EF+S+Y+N Q V++A+DGGR+CRPL+I +NG S++K
Sbjct: 573 TRFPTKFVSLFRNLRRTGKVSEFISIYINSHQKAVHIATDGGRICRPLIIIENGESKVKA 632
Query: 479 YHMKEL 484
+H+ +L
Sbjct: 633 HHLLKL 638
>H0H1B7_9SACH (tr|H0H1B7) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
x Saccharomyces kudriavzevii VIN7 GN=VIN7_10039 PE=3
SV=1
Length = 1149
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/488 (49%), Positives = 337/488 (69%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+LY+ DE+++AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 152 MPIMLRSNKCILYDADESKMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 211
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K K++LK N A+++P+ +V+KA G+ SD E++Q+
Sbjct: 212 KKGIVQASVTSSTHERKSKTYVITKNGKIYLKHNSIAEEIPIAIVLKACGILSDLEIMQL 271
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE ++ +YTQ+QAL ++ +KVK ++ +EG ++
Sbjct: 272 VCGNDSSYQDIFAVNLEESSKLDIYTQQQALEYIGAKVKTMRRQKLTILQEG-----VEA 326
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ A+ N +DD+DYVGNKRLEL+GQLISL
Sbjct: 327 IATTVIAHLTVEALDFREKALYIAMMTRRVVMAMYNPKMIDDRDYVGNKRLELAGQLISL 386
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 387 LFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKR 446
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 447 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 506
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ +LCY LGVED+ + LH ++ V NG ++G
Sbjct: 507 ACGLVKNLALMTHITTDDEEEPIKNLCYVLGVEDITLIDSASLHL--NYGVYLNGTLIGS 564
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FVT R LRR GK+ EF+S+Y N Q V++A+DGGR+CRPL+I +G SR+K+
Sbjct: 565 IRFPIKFVTQFRNLRRTGKVSEFISIYSNSHQMAVHIATDGGRICRPLIIVSSGQSRVKD 624
Query: 479 YHMKELMD 486
H+++L+D
Sbjct: 625 THLRQLLD 632
>E6RAD8_CRYGW (tr|E6RAD8) DNA-directed RNA polymerase OS=Cryptococcus gattii
serotype B (strain WM276 / ATCC MYA-4071) GN=CGB_H1040W
PE=3 SV=1
Length = 1129
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 237/487 (48%), Positives = 336/487 (68%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+PVMLRS C L K+EAELA++GECP+DPGGYFV+KG EKVIL+QEQLSKNRI+++ DK
Sbjct: 134 LPVMLRSDLCNLKGKNEAELARMGECPMDPGGYFVVKGTEKVILVQEQLSKNRILVMKDK 193
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ +V + +++L+ N F + +P+++ +KAMG+ +D+E++Q++
Sbjct: 194 KDEVMAEVTSSTHDRVVKTYVVSKANRLYLRHNSFKEFIPIVIALKAMGLTADKEILQLI 253
Query: 121 -GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKV--KRSMFSNISSEKEGRGSPALK 177
G D RY S EE A+ +T+ QAL + ++V ++ + S++K A +
Sbjct: 254 CGSDERYQEAFGVSLEEAAKEKTFTRRQALEWIGARVSPNQAKDDSGSNQKLTPSDIAQQ 313
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
L L ++PV NFR KCIY A M RR++ A+++ +DD+DYVGNKRLEL+GQL+S
Sbjct: 314 ALAAMVLGHVPVRNMNFRPKCIYLATMTRRVLMAMIDDHMVDDRDYVGNKRLELAGQLLS 373
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FKT +++ DK+L+KP++A FD +++ + D IT ++STGN+ ++
Sbjct: 374 LLFEDSFKTFNSELKKRMDKILEKPNRAGPFDAGTLIRQGGDPITQAFVRSISTGNWSLK 433
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RF +ER G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEG
Sbjct: 434 RFHVERAGVTHVLSRLSFIAALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEG 493
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TTD EAPL+ + + LGVED+ ++G EL+ P +V NG ++G
Sbjct: 494 EACGLVKNLALMTHITTDVPEAPLVKMAFMLGVEDISLVTGNELYRPGVHMVQVNGTLIG 553
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
+ FV RKLRRAG++ EFVS+++N +Y+ASDGGR+CRP++I + G SR+
Sbjct: 554 VTNMAKKFVRQFRKLRRAGRMSEFVSIFINHHHKIIYIASDGGRICRPMIIVEKGRSRVT 613
Query: 478 EYHMKEL 484
H++ L
Sbjct: 614 TEHVRLL 620
>J8PYZ9_SACAR (tr|J8PYZ9) DNA-directed RNA polymerase OS=Saccharomyces arboricola
(strain H-6 / AS 2.3317 / CBS 10644) GN=SU7_3315 PE=3
SV=1
Length = 1149
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/488 (49%), Positives = 336/488 (68%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+LY+ DE+++AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 152 MPIMLRSNKCILYDADESKMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 211
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K K++LK N A+++P+ VV+KA G+ SD E++Q+
Sbjct: 212 KKGIVQASVTSSTHERKSKTYVITKNGKIYLKHNSIAEEIPIAVVLKAGGIVSDLEIMQL 271
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE ++ +YTQ+QAL ++ +KVK +S +EG ++
Sbjct: 272 VCGNDSSYQDIFAVNLEESSKLDIYTQQQALEYIGAKVKTMRRQKLSILQEG-----IEA 326
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ A+ N +DD+DYVGNKRLEL+GQLISL
Sbjct: 327 IATTVIAHLTVEALDFREKALYIAMMTRRVVMAMYNPKMIDDRDYVGNKRLELAGQLISL 386
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 387 LFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKR 446
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 447 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 506
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ LCY LGVED+ + LH ++ V NG ++G
Sbjct: 507 ACGLVKNLALMTHITTDDEEEPIKKLCYVLGVEDITLIDSASLHL--NYGVYLNGTLVGS 564
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FVT R+LRR GK+ EF+S+Y N Q V++A+DGGR+CRPL+I G SR+K+
Sbjct: 565 IRFPTKFVTQFRRLRRTGKVSEFISIYSNSHQMAVHIATDGGRICRPLIIVSGGQSRVKD 624
Query: 479 YHMKELMD 486
H+++L++
Sbjct: 625 THLRQLLE 632
>M4C4J1_HYAAE (tr|M4C4J1) Uncharacterized protein OS=Hyaloperonospora
arabidopsidis (strain Emoy2) PE=3 SV=1
Length = 835
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 246/497 (49%), Positives = 332/497 (66%), Gaps = 15/497 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS RCVL K EA LAKL ECP DPGGYF+++G EKV+LI EQLSKNR+II D
Sbjct: 126 IPIMLRSARCVLAGKSEAALAKLKECPYDPGGYFIVRGVEKVVLIHEQLSKNRVIIEEDA 185
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
RN+ +I + K +++LK N F +P+++V+K MG+ESDQE+V +V
Sbjct: 186 KRNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVLKGMGVESDQEIVSLV 245
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISS-----------EKE 169
G + L SFEE + V+TQ+QAL ++ +K+ ++ +
Sbjct: 246 GSEADVCDALSASFEEASDLKVFTQQQALEYIGAKMNTQTTIGVTGGRHRGGFGRPMQDR 305
Query: 170 GRGSPALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRL 229
A L L+++P NFRLK IY A ++RRI+ ++ +DDKDY GNKRL
Sbjct: 306 NLVDAARSALANLVLNHVPCVNFNFRLKSIYVAHIVRRILFTDKDRTRLDDKDYYGNKRL 365
Query: 230 ELSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTL 289
EL+GQL+SLLFED FK ++ +D +L KP++A+ FDI + D IT G L
Sbjct: 366 ELAGQLLSLLFEDLFKRFNSDLKRQADMVLSKPNRASVFDIIKCV--RTDTITQGFFHAL 423
Query: 290 STGNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGML 349
STGN+ ++RFRM+R G+T VL RLS++ LG MTR+S QFEK+RKVSGPR+LQPSQWGML
Sbjct: 424 STGNWTLKRFRMDRAGVTHVLSRLSYMSALGMMTRISSQFEKTRKVSGPRSLQPSQWGML 483
Query: 350 CPCDTPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLV 409
CP DTPEGEACGLVKNLAL+ HVT+DEE AP+ LC+ LGV D+ SGEE++ ++LV
Sbjct: 484 CPADTPEGEACGLVKNLALLCHVTSDEEPAPIKRLCFDLGVTDVSLSSGEEINHASNYLV 543
Query: 410 IFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIA 469
+ NG+I+G H PR FVT +R++RRAG IGEFVSV +++ Q VY+ASDGGRVCRPL++
Sbjct: 544 MLNGVIIGTHVNPRTFVTRLRRIRRAGLIGEFVSVMIHDVQRVVYIASDGGRVCRPLLLI 603
Query: 470 D--NGISRIKEYHMKEL 484
D +R+ + H+ EL
Sbjct: 604 DPVTHRTRLTQRHLDEL 620
>B2GUR3_XENTR (tr|B2GUR3) DNA-directed RNA polymerase OS=Xenopus tropicalis
GN=polr3b PE=2 SV=1
Length = 1134
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/484 (50%), Positives = 331/484 (68%), Gaps = 4/484 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++V+++ + +LK N + +P+ ++ KAMG+ESDQE+VQM+
Sbjct: 196 KGTVGASVTSSTHEKKSRTNLVVKQGRFYLKHNTLTEDIPIAIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL + +KV+R S K+ + A ++L
Sbjct: 256 GTEEHVIAAFAPSLEECQKAQIFTQMQALKFIGNKVRRQRMWGSSGPKKSKIDEARELLA 315
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + +FR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 316 STILTHVPVKEFHFRTKCIYIAVMVRRVILA-QGANKVDDRDYYGNKRLELAGQLLSLLF 374
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +S+GN+ ++RF+
Sbjct: 375 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISSGNWSLKRFK 431
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 432 MDRQGVTQVLSRLSYIAALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 491
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P+I L LGVED+ L GEEL + FLV NG ILG R
Sbjct: 492 GLVKNLALMTHITTDMEDGPIIKLAANLGVEDVNLLCGEELSYANVFLVFLNGNILGVIR 551
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I N S + H
Sbjct: 552 DHQKLVNTFRLMRRAGYINEFVSISTNISDRCVYISSDGGRLCRPYIIVKNQRSAVTNKH 611
Query: 481 MKEL 484
++EL
Sbjct: 612 IQEL 615
>J7RTG7_KAZNA (tr|J7RTG7) DNA-directed RNA polymerase OS=Kazachstania naganishii
(strain ATCC MYA-139 / BCRC 22969 / CBS 8797 / CCRC
22969 / KCTC 17520 / NBRC 10181 / NCYC 3082)
GN=KNAG0A03250 PE=3 SV=1
Length = 1155
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/488 (49%), Positives = 334/488 (68%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L E +E E+A+L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 161 MPIMLRSNKCILSETNEREMARLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 220
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K +K++LK N A+++P+++V++A G+ SD E++Q+
Sbjct: 221 KKGIVQASVTSSTHERKSKTYVITKNDKIYLKHNSIAEEIPIVIVLRACGIVSDLEIMQV 280
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + +FEE ++ VYTQ+QAL H+ +KVK +S+ +EG ++
Sbjct: 281 VCGNDSSYQDIFAVNFEEASKLNVYTQQQALEHIGTKVKTMRRQKLSTLQEG-----IEA 335
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ A+ N +DD+DYVGNKRLEL+GQLISL
Sbjct: 336 IATTVVAHLTVEALDFREKALYMAMMARRVVMAMYNPKMVDDRDYVGNKRLELAGQLISL 395
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 396 LFEDLFKKFNHDFKTSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKR 455
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 456 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 515
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ LCY LGVED+ + LH ++ V NG ++G
Sbjct: 516 ACGLVKNLALMTHITTDDEEEPIKKLCYILGVEDITVIDSASLHL--NYGVYLNGTLVGI 573
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FV R LRR GKI EF+S+Y+N Q V++A+DGGR+CRPL+I G S +
Sbjct: 574 TRFPNRFVHQFRSLRRTGKISEFISIYINSHQHAVHIATDGGRICRPLIIVTAGKSHVTA 633
Query: 479 YHMKELMD 486
H+++L+D
Sbjct: 634 DHLRKLLD 641
>G3PDG5_GASAC (tr|G3PDG5) DNA-directed RNA polymerase OS=Gasterosteus aculeatus
GN=POLR3B PE=3 SV=1
Length = 1132
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/484 (50%), Positives = 333/484 (68%), Gaps = 6/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K E++KL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPMEVSKLNECPLDPGGYFIVKGQEKVILIQEQLSKNRIIVEQDR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++++++ + +LK N ++ P+ ++ K MG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTNMIVKQGRFYLKHNTLSEDAPIAIIFKGMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL +L +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMASFAPSLEECQKAQIFTQTQALRYLGNKVRRQRM--WGGPKKTKMEEARELLA 313
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 314 SLILTHVPVKEFNFRAKCIYLAVMVRRVILA-QGGNKVDDRDYYGNKRLELAGQLLSLLF 372
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 373 EDLFKKFNSELKKIADQIIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 429
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLSFI LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 430 MDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 489
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P+I L + LGVED+ LSGEEL P FLV NG ILG R
Sbjct: 490 GLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLSGEELSYPSVFLVFLNGNILGVIR 549
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
R ++ R +RRAG I EFVS+ N CVY++SDGGR+CRP +I G +K H
Sbjct: 550 DNRKLISTFRLMRRAGFITEFVSISTNLTDRCVYISSDGGRLCRPYIIVKRGQPMVKNKH 609
Query: 481 MKEL 484
+++L
Sbjct: 610 IEDL 613
>H0GNS7_9SACH (tr|H0GNS7) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
x Saccharomyces kudriavzevii VIN7 GN=VIN7_4619 PE=3 SV=1
Length = 1149
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 241/488 (49%), Positives = 335/488 (68%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+LY+ DE+++AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 152 MPIMLRSNKCILYDADESKMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 211
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K K++LK N A+++P+ +V+KA G+ SD E++Q+
Sbjct: 212 KKGIVQASVTSSTHERKSKTYVITKNGKIYLKHNSIAEEIPIAIVLKACGILSDLEIMQL 271
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE ++ +YTQ+QAL ++ +KVK ++ +EG ++
Sbjct: 272 VCGNDSSYQDIFAVNLEESSKLDIYTQQQALEYIGAKVKTMRRQKLTILQEG-----IEA 326
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ A+ N +DD+DYVGNKRLEL+GQLISL
Sbjct: 327 IATTVIAHLTVEALDFREKALYIAMMTRRVVMAMYNPKMIDDRDYVGNKRLELAGQLISL 386
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 387 LFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKR 446
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 447 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 506
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACG VKNLALMTH+TTD+EE P+ LCY LGVED+ + LH ++ V NG ++G
Sbjct: 507 ACGXVKNLALMTHITTDDEEEPIKKLCYVLGVEDITLIDSASLHL--NYGVYLNGTLIGS 564
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FVT R LRR GK+ EF+S+Y N Q V++A+DGGR+CRPL+I +G SR+K+
Sbjct: 565 IRFPTKFVTQFRHLRRTGKVSEFISIYSNSHQMAVHIATDGGRICRPLIIVSDGQSRVKD 624
Query: 479 YHMKELMD 486
H+++L+D
Sbjct: 625 IHLRKLLD 632
>Q5KC33_CRYNJ (tr|Q5KC33) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CNI00420 PE=3 SV=1
Length = 1129
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/487 (48%), Positives = 335/487 (68%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+PVMLRS C L K+EAELA++GECP+DPGGYFV+KG EKVIL+QEQLSKNRI+++ DK
Sbjct: 134 LPVMLRSDLCNLKGKNEAELARMGECPMDPGGYFVVKGTEKVILVQEQLSKNRILVMKDK 193
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ +V + +++L+ N F + +P+++ +KAMG+ +D+E++Q++
Sbjct: 194 KDEVMAEVTSSTHDRVVKTYVVSKANRLYLRHNSFKEFIPIVIALKAMGLTADKEILQLI 253
Query: 121 -GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKV--KRSMFSNISSEKEGRGSPALK 177
G D RY S EE A+ +T+ QAL + ++V ++ + S++K A +
Sbjct: 254 CGSDERYQEAFGVSLEEAAKEKTFTRRQALEWIGARVSPNQAKDDSGSNQKLTPSDIAQQ 313
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
L L ++PV NFR KCIY A M RR++ A+++ +DD+DYVGNKRLEL+GQL+S
Sbjct: 314 ALAAMVLGHVPVRNMNFRPKCIYLATMARRVLMAMIDDHMVDDRDYVGNKRLELAGQLLS 373
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FKT +++ DK+L+KP++A FD +++ + D IT ++STGN+ ++
Sbjct: 374 LLFEDSFKTFNSELKKRMDKILEKPNRAGPFDAGTLIRQGGDPITQAFVRSISTGNWSLK 433
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RF +ER G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEG
Sbjct: 434 RFHVERAGVTHVLSRLSFIAALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEG 493
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TTD E PL+ + + LGVED+ ++G EL+ P +V NG ++G
Sbjct: 494 EACGLVKNLALMTHITTDVPETPLVKMAFMLGVEDISLVTGNELYRPGVHMVQVNGTLIG 553
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
+ FV RKLRRAG++ EFVS+++N +Y+ASDGGR+CRP++I + G SR+
Sbjct: 554 VTNMAKRFVRQFRKLRRAGRMSEFVSIFINHHHKIIYIASDGGRICRPMIIVEKGRSRVT 613
Query: 478 EYHMKEL 484
H++ L
Sbjct: 614 TEHVRLL 620
>F5HAL3_CRYNB (tr|F5HAL3) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=CNBH0410
PE=3 SV=1
Length = 1129
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/487 (48%), Positives = 335/487 (68%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+PVMLRS C L K+EAELA++GECP+DPGGYFV+KG EKVIL+QEQLSKNRI+++ DK
Sbjct: 134 LPVMLRSDLCNLKGKNEAELARMGECPMDPGGYFVVKGTEKVILVQEQLSKNRILVMKDK 193
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ +V + +++L+ N F + +P+++ +KAMG+ +D+E++Q++
Sbjct: 194 KDEVMAEVTSSTHDRVVKTYVVSKANRLYLRHNSFKEFIPIVIALKAMGLTADKEILQLI 253
Query: 121 -GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKV--KRSMFSNISSEKEGRGSPALK 177
G D RY S EE A+ +T+ QAL + ++V ++ + S++K A +
Sbjct: 254 CGSDERYQEAFGVSLEEAAKEKTFTRRQALEWIGARVSPNQAKDDSGSNQKLTPSDIAQQ 313
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
L L ++PV NFR KCIY A M RR++ A+++ +DD+DYVGNKRLEL+GQL+S
Sbjct: 314 ALAAMVLGHVPVRNMNFRPKCIYLATMARRVLMAMIDDHMVDDRDYVGNKRLELAGQLLS 373
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FKT +++ DK+L+KP++A FD +++ + D IT ++STGN+ ++
Sbjct: 374 LLFEDSFKTFNSELKKRMDKILEKPNRAGPFDAGTLIRQGGDPITQAFVRSISTGNWSLK 433
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RF +ER G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEG
Sbjct: 434 RFHVERAGVTHVLSRLSFIAALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEG 493
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TTD E PL+ + + LGVED+ ++G EL+ P +V NG ++G
Sbjct: 494 EACGLVKNLALMTHITTDVPETPLVKMAFMLGVEDISLVTGNELYRPGVHMVQVNGTLIG 553
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
+ FV RKLRRAG++ EFVS+++N +Y+ASDGGR+CRP++I + G SR+
Sbjct: 554 VTNMAKRFVRQFRKLRRAGRMSEFVSIFINHHHKIIYIASDGGRICRPMIIVEKGRSRVT 613
Query: 478 EYHMKEL 484
H++ L
Sbjct: 614 TEHVRLL 620
>F6WGH7_MONDO (tr|F6WGH7) DNA-directed RNA polymerase OS=Monodelphis domestica
GN=POLR3B PE=3 SV=1
Length = 1133
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ +I +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGTVGASVTSSTHEKKSRTNIAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKMEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + E H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTEKH 610
Query: 481 MKEL 484
M EL
Sbjct: 611 MDEL 614
>K7GBE5_PELSI (tr|K7GBE5) DNA-directed RNA polymerase OS=Pelodiscus sinensis
GN=POLR3B PE=3 SV=1
Length = 1074
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/484 (50%), Positives = 332/484 (68%), Gaps = 6/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 78 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 137
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++++++ + +LK N ++ +P+ ++ KAMG+ESDQE+VQM+
Sbjct: 138 KGTVGASVTSSTHEKKSRTNMIVKQGRFYLKHNTLSEDIPIAIIFKAMGVESDQEIVQMI 197
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 198 GTEEHVMAAFAPSLEECQKAQIFTQMQALKYIGNKVRRQRM--WGGPKKTKMEEARELLA 255
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A ++ +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 256 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGENKVDDRDYYGNKRLELAGQLLSLLF 314
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 315 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 371
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 372 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 431
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P+I L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 432 GLVKNLALMTHITTDMEDGPIIKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 491
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 492 DHQKLVYTFRLMRRAGYINEFVSISTNLADRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 551
Query: 481 MKEL 484
M+EL
Sbjct: 552 MEEL 555
>G3WF35_SARHA (tr|G3WF35) DNA-directed RNA polymerase (Fragment) OS=Sarcophilus
harrisii GN=POLR3B PE=3 SV=1
Length = 1133
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/484 (50%), Positives = 332/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ +I +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGTVGASVTSSTHEKKSRTNIAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKMEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + + H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTDKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>F1SPQ0_PIG (tr|F1SPQ0) DNA-directed RNA polymerase (Fragment) OS=Sus scrofa
GN=LOC100737037 PE=3 SV=2
Length = 902
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 133 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 192
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 193 KGTVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 252
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 253 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 311
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 312 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 370
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 371 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 427
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 428 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 487
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 488 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 547
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 548 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 607
Query: 481 MKEL 484
M+EL
Sbjct: 608 MEEL 611
>C5DY85_ZYGRC (tr|C5DY85) DNA-directed RNA polymerase OS=Zygosaccharomyces rouxii
(strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 /
NRRL Y-229) GN=ZYRO0F11066g PE=3 SV=1
Length = 1143
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/488 (50%), Positives = 333/488 (68%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L+ DE +A+L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 149 MPIMLRSNKCILHNSDEKTMARLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 208
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K +K++LK N A++VP++VV+KA G+ SD EV+Q+
Sbjct: 209 KKAIVQASVTSSTHERKSKTYVVTKNDKIYLKHNSIAEEVPIVVVLKACGIVSDLEVMQL 268
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE ++ G+YTQ+QAL ++ SKVK +S +EG ++
Sbjct: 269 VCGNDSSYQDIFAVNLEEASKLGLYTQQQALEYIGSKVKTVRRQKLSVLQEG-----IEA 323
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ A+ N +DD+DYVGNKRLEL+GQLISL
Sbjct: 324 IATTVIAHLTVAALDFREKALYIAMMTRRVVMAMQNYKMVDDRDYVGNKRLELAGQLISL 383
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 384 LFEDLFKKFNNDFKASIDKVLKKPNRAMEYDALLSINVHSNNITSGLSRAISTGNWSLKR 443
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 444 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 503
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ LC+ LGVED+ + LH + V NG ++G
Sbjct: 504 ACGLVKNLALMTHITTDDEEEPIKKLCFILGVEDITLIDSASLHL--HYGVYLNGTLIGT 561
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
+ P FV+ R LRR+GKI EF+S+Y N V++A+DGGR+CRPL+I NG SR+
Sbjct: 562 TKFPVKFVSQFRNLRRSGKISEFISIYTNSHHKAVHIATDGGRICRPLIIVSNGKSRVTS 621
Query: 479 YHMKELMD 486
H+KEL++
Sbjct: 622 EHLKELLE 629
>H0V470_CAVPO (tr|H0V470) DNA-directed RNA polymerase OS=Cavia porcellus PE=3
SV=1
Length = 1134
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/484 (50%), Positives = 332/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ + +++ + +L+ N ++ +P+ ++ KAMG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTSMAVKQGRFYLRHNTLSEDIPIAIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + R PS EEC ++ ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEERVMAAFGPSLEECQKSQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ +L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNFLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHQKLVHTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>H3G9F7_PHYRM (tr|H3G9F7) DNA-directed RNA polymerase OS=Phytophthora ramorum
PE=3 SV=1
Length = 1158
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 246/497 (49%), Positives = 334/497 (67%), Gaps = 15/497 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS RCVL K EA LAKL ECP DPGGYF+++G EKV+LI EQLSKNR+II D
Sbjct: 135 IPIMLRSSRCVLAGKGEAALAKLKECPYDPGGYFIVRGVEKVVLIHEQLSKNRVIIEEDA 194
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+N+ +I + K +++LK N F +P+++V++ MG+ESDQE++ +V
Sbjct: 195 KKNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVLRGMGVESDQEIMSLV 254
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK--RSMFSNISSEKEGRGSP---- 174
G + L SFEE + V+TQ+QAL ++ SK+ + + + G P
Sbjct: 255 GSESDICDALSASFEEASDLKVFTQQQALEYIGSKMNALTKIGATGGRHRGAAGRPQQDR 314
Query: 175 -----ALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRL 229
A L L+++P NFRLK IY A ++RRI+ ++ +DDKDY GNKRL
Sbjct: 315 NLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTRLDDKDYYGNKRL 374
Query: 230 ELSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTL 289
EL+GQL+SLLFED FK ++ +D +L KP++A+ FDI + D IT G L
Sbjct: 375 ELAGQLLSLLFEDLFKRFNSDLKRQADMVLSKPNRASVFDILKCV--RTDTITQGFYHAL 432
Query: 290 STGNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGML 349
STGN+ ++RFRM+R G+T VL RLS++ LG MTR+S QFEK+RKVSGPR+LQPSQWGML
Sbjct: 433 STGNWTLKRFRMDRAGVTHVLSRLSYMSALGMMTRISSQFEKTRKVSGPRSLQPSQWGML 492
Query: 350 CPCDTPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLV 409
CP DTPEGEACGLVKNLAL+ HVT+DEE AP+ LC+ LGV D+ SGEE++ ++LV
Sbjct: 493 CPADTPEGEACGLVKNLALLCHVTSDEEPAPIKRLCFDLGVTDVSLSSGEEINHASNYLV 552
Query: 410 IFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIA 469
+ NG+I+G H PR FVT +R++RRAG IGEFVSV +++ Q VY+ASDGGRVCRPL++
Sbjct: 553 MLNGVIIGTHVNPRAFVTRLRRIRRAGLIGEFVSVMIHDVQRVVYIASDGGRVCRPLLLI 612
Query: 470 D--NGISRIKEYHMKEL 484
D +R+ + H+ EL
Sbjct: 613 DPVTHRTRLTQRHLDEL 629
>L8H6N0_ACACA (tr|L8H6N0) DNA-directed RNA polymerase OS=Acanthamoeba castellanii
str. Neff GN=ACA1_114660 PE=3 SV=1
Length = 1035
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/486 (50%), Positives = 331/486 (68%), Gaps = 40/486 (8%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+ML+S +C+L K+E ELA L ECPLDPGGYFV+KG E+V+L+QEQLSKNRIII DK
Sbjct: 136 MPIMLKSSKCILTGKNEQELAALQECPLDPGGYFVVKGVERVLLVQEQLSKNRIIIEEDK 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ + ++ K++LKLN ++VP++++MKAMG+ESDQEVVQ+V
Sbjct: 196 TGGVAANVVRTT--------LNVKNGKIYLKLNMLTEEVPIVILMKAMGVESDQEVVQLV 247
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G +P Y+ ++ S EEC + Q + H +L
Sbjct: 248 GSEPYYADMMSSSLEECCR----MQAEEARH--------------------------ILA 277
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
LS++PV +FR+K IY +M+RRI+ A+ + MDDKDY GNKRLEL+G L+SLLF
Sbjct: 278 SVVLSHVPVVNYDFRVKGIYVGLMIRRILLAMRDPSTMDDKDYYGNKRLELAGSLLSLLF 337
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D +L K ++A FDI + QD I++ L +STGN+ ++RF+
Sbjct: 338 EDTFKKFNAELKRQADTVLAKQNRAAEFDILKCI--RQDTISYALSRAISTGNWNLKRFK 395
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
MER G+TQVL RLSFI LG MT++S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGE+C
Sbjct: 396 MERAGVTQVLSRLSFIAALGMMTKISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESC 455
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLAL+TH+TTDE+EAP+ + LGVEDM LSGEE+H+ ++LV NG++LG HR
Sbjct: 456 GLVKNLALLTHITTDEDEAPIRRIALNLGVEDMALLSGEEMHSAGNYLVFMNGMLLGVHR 515
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
P FV R LRR+GK+ EFVSV+++ Q +Y+ASDGGRVCRPL+I + G R++ H
Sbjct: 516 APHTFVRNFRLLRRSGKMSEFVSVFIHYGQRSIYIASDGGRVCRPLIIVEKGRPRVETRH 575
Query: 481 MKELMD 486
+KE+ D
Sbjct: 576 IKEVTD 581
>H2AXY4_KAZAF (tr|H2AXY4) DNA-directed RNA polymerase OS=Kazachstania africana
(strain ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 /
NBRC 1671 / NRRL Y-8276) GN=KAFR0G02000 PE=3 SV=1
Length = 1148
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/488 (49%), Positives = 335/488 (68%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C LY DEAE+AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 154 MPIMLRSNKCTLYGCDEAEMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 213
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K +K++LK N ++++P+++V+KA G+ S+ E++Q+
Sbjct: 214 KKGIVQASVTSSTHERKSKTYVVTKNDKIYLKHNSISEEIPIVIVLKACGVVSELEIMQL 273
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE ++ +YTQ+QAL ++ +KVK ++ +EG ++
Sbjct: 274 VCGNDSSYQDIFAVNIEEASKFNIYTQQQALEYIGAKVKTMRRQKLTVLQEG-----IEA 328
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V NFR K +Y A+M RR++ A+ N +DD+DYVGNKRLEL+GQLISL
Sbjct: 329 IATTVIAHLTVEALNFREKALYMAMMTRRVVMAMHNPKMVDDRDYVGNKRLELAGQLISL 388
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 389 LFEDLFKKFNSDFKASIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKR 448
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 449 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 508
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ LCY LGVED+ + LH ++ V NG ++G
Sbjct: 509 ACGLVKNLALMTHITTDDEEEPIKKLCYVLGVEDINLIDSASLHL--NYSVFLNGTLIGS 566
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R PR FV+ R LRR+ K+ F+S++ N +Q V++A+DGGR+CRPL+I NG S +K
Sbjct: 567 ARFPRKFVSHFRALRRSCKVSAFISIHTNSEQKAVHIATDGGRICRPLIIVTNGESHVKA 626
Query: 479 YHMKELMD 486
+H+K L++
Sbjct: 627 HHLKRLLE 634
>G5C459_HETGA (tr|G5C459) DNA-directed RNA polymerase OS=Heterocephalus glaber
GN=GW7_19195 PE=3 SV=1
Length = 1133
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 333/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + R PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEERVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 CTILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS++ LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYVSALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ +L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLAGNLGVEDVNFLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>Q4S7G7_TETNG (tr|Q4S7G7) DNA-directed RNA polymerase (Fragment) OS=Tetraodon
nigroviridis GN=GSTENG00022790001 PE=3 SV=1
Length = 1171
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/484 (50%), Positives = 330/484 (68%), Gaps = 6/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K E AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 165 MPIMLRSSNCVLTGKTPMEFAKLNECPLDPGGYFIVKGQEKVILIQEQLSKNRIIVDQDR 224
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++++++ + +L+ N ++ P+ ++ K MG+ESDQE+VQM+
Sbjct: 225 KGAVGASVTSSTHEKKSRTNMIVKQGRFYLRHNTLSEDAPIAIIFKGMGVESDQEIVQMI 284
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL +L +KV+R K+ + A ++L
Sbjct: 285 GTEENVMASFAPSLEECQKAQIFTQTQALRYLGNKVRRQRM--WGGPKKTKMEEARELLA 342
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 343 SLILTHVPVKEFNFRAKCIYLAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 401
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 402 EDLFKKFNSELKKIADQIIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 458
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLSFI LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 459 MDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 518
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P+I L + LGVED+ L GEEL P FLV NG ILG R
Sbjct: 519 GLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFLVFLNGNILGVIR 578
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I G +K H
Sbjct: 579 DHQKLVGTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKGQPMVKNKH 638
Query: 481 MKEL 484
M++L
Sbjct: 639 MEDL 642
>G5ABA9_PHYSP (tr|G5ABA9) DNA-directed RNA polymerase OS=Phytophthora sojae
(strain P6497) GN=PHYSODRAFT_340380 PE=3 SV=1
Length = 1158
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 247/499 (49%), Positives = 335/499 (67%), Gaps = 19/499 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS RCVL K EA LAKL ECP DPGGYF+++G EKV+LI EQLSKNR+II D
Sbjct: 135 IPIMLRSSRCVLAGKSEAALAKLKECPYDPGGYFIVRGVEKVVLIHEQLSKNRVIIEEDG 194
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
RN+ +I + K +++LK N F +P+++V + MG+ESDQE+V +V
Sbjct: 195 KRNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVFRGMGVESDQEIVSLV 254
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISS-----------EKE 169
G +P + SFEE + V+TQ+QAL ++ SK+ + + I + ++
Sbjct: 255 GSEPDICDAMSASFEEASDLKVFTQQQALEYIGSKM--NTLTKIGAMGGRNRGGAGRPQQ 312
Query: 170 GRG--SPALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNK 227
R A L L+++P NFRLK IY A ++RRI+ ++ +DDKDY GNK
Sbjct: 313 DRNLVDAARSALANLVLNHVPCENFNFRLKSIYVAHIVRRILFTDKDRTRLDDKDYYGNK 372
Query: 228 RLELSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLES 287
RLEL+GQL+SLLFED FK ++ +D +L KP++A+ FDI + D IT G
Sbjct: 373 RLELAGQLLSLLFEDLFKRFNSDLKRQADMVLSKPNRASVFDIIKCV--RTDTITQGFYH 430
Query: 288 TLSTGNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWG 347
LSTGN+ ++RFRM+R G+T VL RLS++ LG MTR+S QFEK+RKVSGPR+LQPSQWG
Sbjct: 431 ALSTGNWTLKRFRMDRAGVTHVLSRLSYMSALGMMTRISSQFEKTRKVSGPRSLQPSQWG 490
Query: 348 MLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSF 407
MLCP DTPEGEACGLVKNLAL+ HVT+DEE P+ LC+ LGV D+ SGEE++ ++
Sbjct: 491 MLCPADTPEGEACGLVKNLALLCHVTSDEEPGPIKRLCFDLGVTDVSLSSGEEINHASNY 550
Query: 408 LVIFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLV 467
LV+ NG+I+G H PR FVT +R++RRAG IGEFVSV +++ Q VY+ASDGGRVCRPL+
Sbjct: 551 LVMLNGVIIGTHVNPRAFVTRLRRIRRAGLIGEFVSVMIHDVQRVVYIASDGGRVCRPLL 610
Query: 468 IAD--NGISRIKEYHMKEL 484
+ D +R+ + H+ EL
Sbjct: 611 LIDPVTHRTRLTQRHLDEL 629
>I3KBR7_ORENI (tr|I3KBR7) DNA-directed RNA polymerase (Fragment) OS=Oreochromis
niloticus GN=polr3b PE=3 SV=1
Length = 1032
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/484 (50%), Positives = 331/484 (68%), Gaps = 6/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K E +KL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 36 MPIMLRSSNCVLTGKTPMEFSKLNECPLDPGGYFIVKGQEKVILIQEQLSKNRIIVEQDR 95
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ +I++++ + +L+ N ++ P+ ++ K MG+ESDQE+VQM+
Sbjct: 96 KGAVGASVTSSTHEKKSRTNIIVKQGRFYLRHNTLSEDAPIAIIFKGMGVESDQEIVQMI 155
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL +L +KV+R K+ + A ++L
Sbjct: 156 GTEESVMASFAPSLEECQKAQIFTQTQALRYLGNKVRRQRM--WGGPKKTKMEEARELLA 213
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 214 SLILTHVPVKEFNFRAKCIYLAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 272
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 273 EDLFKKFNAELKKIADQIIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 329
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 330 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 389
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P+I L + LGVED+ L GEEL P FLV NG ILG R
Sbjct: 390 GLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFLVFLNGNILGVIR 449
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ + R +RRAG I EFVS+ N CVY++SDGGR+CRP +I G+ +K H
Sbjct: 450 DHQKLINTFRLMRRAGFINEFVSISTNLSDRCVYISSDGGRLCRPYIIVKKGVPMVKNKH 509
Query: 481 MKEL 484
+++L
Sbjct: 510 IEDL 513
>L5KIF8_PTEAL (tr|L5KIF8) DNA-directed RNA polymerase OS=Pteropus alecto
GN=PAL_GLEAN10015449 PE=3 SV=1
Length = 1207
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 210 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 269
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 270 KGTVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 329
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 330 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 388
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 389 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 447
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 448 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 504
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 505 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 564
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 565 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 624
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 625 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 684
Query: 481 MKEL 484
M+EL
Sbjct: 685 MEEL 688
>M3YL36_MUSPF (tr|M3YL36) DNA-directed RNA polymerase OS=Mustela putorius furo
GN=Polr3b PE=3 SV=1
Length = 1133
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLAGNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
R V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHRKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>E1BPX6_BOVIN (tr|E1BPX6) Uncharacterized protein OS=Bos taurus GN=POLR3B PE=4
SV=1
Length = 1133
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGTVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>E2RHZ2_CANFA (tr|E2RHZ2) DNA-directed RNA polymerase OS=Canis familiaris
GN=POLR3B PE=3 SV=1
Length = 1133
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGTVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>L8IQP8_BOSMU (tr|L8IQP8) DNA-directed RNA polymerase OS=Bos grunniens mutus
GN=M91_13979 PE=3 SV=1
Length = 1133
Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGTVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>F6X4Z9_ORNAN (tr|F6X4Z9) DNA-directed RNA polymerase (Fragment)
OS=Ornithorhynchus anatinus GN=POLR3B PE=3 SV=1
Length = 1110
Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 113 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 172
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P+ ++ KAMG+ESDQE+VQM+
Sbjct: 173 KGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIAIIFKAMGVESDQEIVQMI 232
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 233 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKMEEARELLA 291
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 292 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 350
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 351 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 407
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 408 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 467
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 468 GLVKNLALMTHITTDMEDGPIVKLANNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 527
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + + H
Sbjct: 528 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTDKH 587
Query: 481 MKEL 484
M+EL
Sbjct: 588 MEEL 591
>H0ZLB7_TAEGU (tr|H0ZLB7) DNA-directed RNA polymerase OS=Taeniopygia guttata
GN=POLR3B PE=3 SV=1
Length = 1130
Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/484 (50%), Positives = 331/484 (68%), Gaps = 6/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 134 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 193
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++V+++ + +L+ N ++ +P+ ++ KAMG+ESDQE+VQM+
Sbjct: 194 KGTVGASVTSSTHEKKSRTNMVVKQGRFYLRHNTLSEDIPIAIIFKAMGVESDQEIVQMI 253
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 254 GTEEHVMAAFAPSLEECQKAQIFTQMQALKYIGNKVRRQRM--WGGPKKTKMEEARELLA 311
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++ V + NFR KCIY AVM+RR++ A ++ +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 312 STILTHVLVKEFNFRAKCIYTAVMVRRVILA-QGENKVDDRDYYGNKRLELAGQLLSLLF 370
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 371 EDLFKKFNSELKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 427
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 428 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 487
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P+I L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 488 GLVKNLALMTHITTDMEDGPIIKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 547
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R LRRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 548 DHQKLVNTFRILRRAGYINEFVSISTNLSDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 607
Query: 481 MKEL 484
M+EL
Sbjct: 608 MEEL 611
>F7B4P7_HORSE (tr|F7B4P7) DNA-directed RNA polymerase OS=Equus caballus GN=POLR3B
PE=3 SV=1
Length = 1133
Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGTVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>D3ZV30_RAT (tr|D3ZV30) DNA-directed RNA polymerase OS=Rattus norvegicus
GN=Polr3b PE=3 SV=1
Length = 1133
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/484 (50%), Positives = 332/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P+I L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIIKLAGNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V+ R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVSTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>D2HXV2_AILME (tr|D2HXV2) DNA-directed RNA polymerase (Fragment) OS=Ailuropoda
melanoleuca GN=PANDA_017492 PE=3 SV=1
Length = 1058
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 61 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 120
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 121 KGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 180
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 181 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 239
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 240 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 298
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 299 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 355
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 356 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 415
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 416 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 475
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 476 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 535
Query: 481 MKEL 484
M+EL
Sbjct: 536 MEEL 539
>G3SNX7_LOXAF (tr|G3SNX7) DNA-directed RNA polymerase OS=Loxodonta africana
GN=LOC100673151 PE=3 SV=1
Length = 1138
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 137 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 196
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 197 KGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 256
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 257 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRLWG-GGPKKTKMEEARELLA 315
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 316 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 374
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 375 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 431
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 432 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 491
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 492 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 551
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 552 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKEKPAVTAKH 611
Query: 481 MKEL 484
M+EL
Sbjct: 612 MEEL 615
>F7CM98_MACMU (tr|F7CM98) DNA-directed RNA polymerase OS=Macaca mulatta GN=POLR3B
PE=2 SV=1
Length = 1075
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 78 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 137
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 138 KGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 197
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 198 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 256
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 257 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 315
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 316 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 372
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 373 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 432
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 433 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 492
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 493 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 552
Query: 481 MKEL 484
M+EL
Sbjct: 553 MEEL 556
>E1BRJ4_CHICK (tr|E1BRJ4) DNA-directed RNA polymerase OS=Gallus gallus GN=POLR3B
PE=3 SV=1
Length = 1132
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/484 (50%), Positives = 331/484 (68%), Gaps = 6/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++V+++ + +L+ N ++ +P+ ++ KAMG+ESDQE+VQM+
Sbjct: 196 KGTVGASVTSSTHEKKSRTNMVVKQGRFYLRHNTLSEDIPIAIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFAPSLEECQKAQIFTQMQALKYIGNKVRRQRM--WGGPKKTKMEEARELLA 313
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++ V + NFR KCIY AVM+RR++ A ++ +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 314 STILTHVLVKEFNFRAKCIYTAVMVRRVILA-QGENKVDDRDYYGNKRLELAGQLLSLLF 372
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 373 EDLFKKFNSELKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 429
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 430 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 489
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P+I L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 490 GLVKNLALMTHITTDMEDGPIIKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 549
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 550 DHQKLVNTFRIMRRAGYINEFVSISTNLSDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 609
Query: 481 MKEL 484
M+EL
Sbjct: 610 MEEL 613
>G1R4M2_NOMLE (tr|G1R4M2) DNA-directed RNA polymerase OS=Nomascus leucogenys
GN=POLR3B PE=3 SV=1
Length = 1133
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>H0XBX4_OTOGA (tr|H0XBX4) DNA-directed RNA polymerase OS=Otolemur garnettii
GN=POLR3B PE=3 SV=1
Length = 1133
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVIAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>Q7Z3R8_HUMAN (tr|Q7Z3R8) DNA-directed RNA polymerase OS=Homo sapiens
GN=DKFZp686D10173 PE=2 SV=1
Length = 1133
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>R7SWL9_DICSQ (tr|R7SWL9) Beta and beta-prime subunits of DNA dependent
RNA-polymerase OS=Dichomitus squalens (strain LYAD-421)
GN=DICSQDRAFT_155881 PE=4 SV=1
Length = 1142
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/487 (48%), Positives = 332/487 (68%), Gaps = 5/487 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +CVL ++EA+LA++ ECPLDPGGYF++KG EKVIL+QEQLSKNRII+ +D
Sbjct: 143 LPIMLRSNKCVLTGRNEAQLARMTECPLDPGGYFIVKGTEKVILVQEQLSKNRIIVEIDP 202
Query: 61 NRNIXXXXXXXXXXXXXXXD--IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQ 118
+ + + +K K++L+ N + VP+ + +KA+G++SD+E++
Sbjct: 203 TKGVVQASCTSSTHGGLKSKTYVATKKGKIYLRHNSIHEDVPIAIALKALGIQSDKEILL 262
Query: 119 MV-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALK 177
+ G Y P+ EE A+ GV+T+ QAL + S+VK + + + AL+
Sbjct: 263 LTAGNHEAYKSAFSPNLEEAAKLGVFTRHQALEWIGSRVKVN--RRVVGPRRPSWEEALE 320
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
L L+++PVH +FR K ++ A M RR++ A+ ++ +DD+DYVGNKRLEL+GQL++
Sbjct: 321 ALATIVLAHVPVHGLDFRPKAVFVATMTRRVLMAMDDEKMVDDRDYVGNKRLELAGQLLA 380
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FKT ++ + DK+L KP + + FD + + D IT G +STGN+ ++
Sbjct: 381 LLFEDLFKTFNANLKAAIDKVLKKPSRTSEFDAFNTMQFQGDHITAGFVRAISTGNWSLK 440
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RF+M+R G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEG
Sbjct: 441 RFKMDRAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEG 500
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TTD EE P+I + + LGVED+ +G E++ P +F+V NG I+G
Sbjct: 501 EACGLVKNLALMTHITTDVEEEPIIRIAFMLGVEDISLATGAEIYGPHTFVVNVNGSIIG 560
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
R P FV+ R+LRRAG+ EFVSVY+N V +ASDGGR+CRP++I +NG ++
Sbjct: 561 LTRYPARFVSNFRRLRRAGRFSEFVSVYINHHHRTVLIASDGGRICRPMIIVENGRPKVT 620
Query: 478 EYHMKEL 484
H+ +L
Sbjct: 621 SEHIAQL 627
>H2Q6S4_PANTR (tr|H2Q6S4) DNA-directed RNA polymerase OS=Pan troglodytes
GN=POLR3B PE=2 SV=1
Length = 1133
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>H2NIH8_PONAB (tr|H2NIH8) DNA-directed RNA polymerase OS=Pongo abelii GN=POLR3B
PE=3 SV=2
Length = 1133
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>G7PI40_MACFA (tr|G7PI40) DNA-directed RNA polymerase OS=Macaca fascicularis
GN=EGM_03706 PE=3 SV=1
Length = 1133
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>G1SEA1_RABIT (tr|G1SEA1) DNA-directed RNA polymerase OS=Oryctolagus cuniculus
GN=POLR3B PE=3 SV=1
Length = 1133
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 330/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGTVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPSVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>G1MC66_AILME (tr|G1MC66) DNA-directed RNA polymerase OS=Ailuropoda melanoleuca
GN=POLR3B PE=3 SV=1
Length = 1133
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>F6WH42_MACMU (tr|F6WH42) DNA-directed RNA polymerase OS=Macaca mulatta GN=POLR3B
PE=2 SV=1
Length = 1133
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>K9INW5_DESRO (tr|K9INW5) DNA-directed RNA polymerase OS=Desmodus rotundus PE=2
SV=1
Length = 1133
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>K5VMD1_PHACS (tr|K5VMD1) DNA-directed RNA polymerase OS=Phanerochaete carnosa
(strain HHB-10118-sp) GN=PHACADRAFT_100019 PE=3 SV=1
Length = 1141
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/484 (48%), Positives = 332/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +CVL + E +LA++ ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ +D
Sbjct: 141 LPIMLRSNKCVLSGRTEIQLARMSECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVEVDP 200
Query: 61 NRNIXXXXXXXXXXXXXXXD--IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQ 118
+ + + +K K++L+ N + VP+++ +KA+G +SD+E++
Sbjct: 201 VKGVVQASCTSSTHGGLKSKTYVATKKGKIYLRHNSIHEDVPIVIALKALGFQSDKEILL 260
Query: 119 MV-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALK 177
+ G + Y P+ EE A++GV+T+ QAL ++ S+VK + + + AL+
Sbjct: 261 LTAGNNEAYKSAFSPNLEEAAKSGVFTKHQALEYIGSRVKVN--RKVIGPRRPAWEEALE 318
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
VL L+++PV +FR K I+ A M RR++ A+ ++ +DD+DYVGNKRLEL+GQL++
Sbjct: 319 VLATIVLAHVPVVNMDFRGKAIFVATMTRRVLMAMDDEKMVDDRDYVGNKRLELAGQLLA 378
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FKT ++++ DK+L KP + + FD + + D IT G +STGN+ ++
Sbjct: 379 LLFEDLFKTFNTNLKSAIDKVLKKPSRTSEFDAFNTMQFMGDHITAGFVRAISTGNWSLK 438
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RF+MER G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEG
Sbjct: 439 RFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEG 498
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TTD +E P++ L Y LGVED+ +G E++ P +++V NG I+G
Sbjct: 499 EACGLVKNLALMTHITTDVDEEPIVRLAYMLGVEDISTATGTEIYGPHTYVVNVNGSIIG 558
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
R P FV RKLRRAG++ EFVSVY+N V +ASDGGR+CRP++IAD G R+
Sbjct: 559 LTRYPGRFVHNFRKLRRAGRLSEFVSVYINHHHRTVLIASDGGRICRPMIIADRGRPRVT 618
Query: 478 EYHM 481
H+
Sbjct: 619 TEHI 622
>F7G4S4_CALJA (tr|F7G4S4) DNA-directed RNA polymerase OS=Callithrix jacchus
GN=POLR3B PE=3 SV=1
Length = 1133
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 331/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGAVGASVPSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>A8NJT3_COPC7 (tr|A8NJT3) DNA-directed RNA polymerase OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)
GN=CC1G_11201 PE=3 SV=2
Length = 1149
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 233/487 (47%), Positives = 334/487 (68%), Gaps = 5/487 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +CVL K EA+LA++ ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ D
Sbjct: 141 LPIMLRSNKCVLTGKTEAQLARMTECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVETDN 200
Query: 61 NRNIXXXXXXXXXXXXXXXD--IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQ 118
+ I ++ +K +++L+ N + VP+++ +KA+G++SD+E++
Sbjct: 201 VKGIVQASCTSSTHGGLKSKTYVITKKGRIYLRHNSIHEDVPIVIALKALGIQSDKEILL 260
Query: 119 MV-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALK 177
+ G Y + + E+ A+ G++T+ QAL ++ ++VK + + + AL+
Sbjct: 261 LTAGNTEEYKTIFSANIEDAAKLGIFTRHQALEYIGARVKVN--RKVMGPRRPAWEEALE 318
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
L L+++PV +FR K I+ A M RR++ A+ ++ +DD+DYVGNKRLEL+GQL++
Sbjct: 319 ALATIVLAHVPVQGLDFRAKAIFVATMTRRVLMAMDDESMVDDRDYVGNKRLELAGQLLA 378
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FKT ++++ DK+L KP + + FD + + D +T G +STGN+ ++
Sbjct: 379 LLFEDLFKTYNSNLKSAIDKVLKKPSRTSEFDAFNTMQMQGDHLTSGFVRAISTGNWSLK 438
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RF+MER G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWG+LCP DTPEG
Sbjct: 439 RFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGPRALQPSQWGVLCPSDTPEG 498
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TTD EE P+I L + LGVED+ +G E++ P+S++V NG I+G
Sbjct: 499 EACGLVKNLALMTHITTDVEEGPIIRLAFMLGVEDISLTTGTEIYGPNSYVVYINGTIIG 558
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
R P FV+ RKLRRA + EFVSVY+N V++ASDGGR+CRP++I + G SR+
Sbjct: 559 VTRTPTKFVSQFRKLRRARRFSEFVSVYINHHHRAVHIASDGGRICRPMIIVEKGRSRVT 618
Query: 478 EYHMKEL 484
H+ +L
Sbjct: 619 SDHIVQL 625
>H3BBW8_LATCH (tr|H3BBW8) DNA-directed RNA polymerase OS=Latimeria chalumnae PE=3
SV=1
Length = 1133
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/484 (49%), Positives = 333/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++++++ K +L+ N ++ +P+ ++ KAMG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTNLIVKQGKFYLRHNTLSEDIPIAIIFKAMGLESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL H+ +KV+R ++ + A ++L
Sbjct: 256 GTEEHVMAAFAPSLEECQKAQIFTQMQALKHIGNKVRRQRMWG-GGPRKTKMEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++ V + NFR K +Y AVM+RR++ A ++ +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILAHVLVKEFNFRAKSVYTAVMVRRVILA-QGENKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNAELKKIADQIIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P+I L + LGVED+ L GEEL P+ F+V NG+ILG +
Sbjct: 491 GLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPNVFIVFLNGIILGVIQ 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I N + H
Sbjct: 551 DHQKLVKTFRLMRRAGYINEFVSISTNITDRCVYISSDGGRLCRPYIIVKNQKPAVTNKH 610
Query: 481 MKEL 484
++EL
Sbjct: 611 IEEL 614
>G3HNW4_CRIGR (tr|G3HNW4) DNA-directed RNA polymerase OS=Cricetulus griseus
GN=I79_012460 PE=3 SV=1
Length = 1133
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 332/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL++LLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLALLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P+I L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIIKLAGNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V+ R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVSTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTVKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>L5LIB3_MYODS (tr|L5LIB3) DNA-directed RNA polymerase OS=Myotis davidii
GN=MDA_GLEAN10021904 PE=3 SV=1
Length = 1122
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/484 (50%), Positives = 330/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 125 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 184
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+E DQE+VQM+
Sbjct: 185 KGTVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVECDQEIVQMI 244
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 245 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 303
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 304 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 362
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 363 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 419
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 420 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 479
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 480 GLVKNLALMTHITTDMEDGPIVRLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 539
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 540 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 599
Query: 481 MKEL 484
M+EL
Sbjct: 600 MEEL 603
>D0N9M5_PHYIT (tr|D0N9M5) DNA-directed RNA polymerase OS=Phytophthora infestans
(strain T30-4) GN=PITG_08173 PE=3 SV=1
Length = 1166
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/497 (49%), Positives = 329/497 (66%), Gaps = 15/497 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS RCVL K EA LAKL ECP DPGGYF+++G EKV+LI EQLSKNR+II D
Sbjct: 143 IPIMLRSSRCVLAGKSEAALAKLKECPYDPGGYFIVRGVEKVVLIHEQLSKNRVIIEEDG 202
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
N+ +I + K +++LK N F +P+++V + MG+ESDQE+V +V
Sbjct: 203 KHNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVFRGMGVESDQEIVSLV 262
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---------RSMFSNISSEKEGR 171
G + L SFEE + V+TQ+QAL ++ SK+ + R
Sbjct: 263 GSESDICDALSASFEEASDLKVFTQQQALEYIGSKMNALTKIGAMGGRHRGGAGRPQNDR 322
Query: 172 G--SPALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRL 229
A L L+++P NFRLK IY A ++RRI+ ++ +DDKDY GNKRL
Sbjct: 323 NLVDAARSALANLVLNHVPCDNFNFRLKSIYVAHIVRRILFTDKDRTRLDDKDYYGNKRL 382
Query: 230 ELSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTL 289
EL+GQL+SLLFED FK ++ +D +L KP++A+ FDI + D IT G L
Sbjct: 383 ELAGQLLSLLFEDLFKRFNSDLKRQADMVLSKPNRASVFDILKCV--RTDTITQGFYHAL 440
Query: 290 STGNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGML 349
STGN+ ++RFRM+R G+T VL RLS++ LG MTR+S QFEK+RKVSGPR+LQPSQWGML
Sbjct: 441 STGNWTLKRFRMDRAGVTHVLSRLSYMSALGMMTRISSQFEKTRKVSGPRSLQPSQWGML 500
Query: 350 CPCDTPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLV 409
CP DTPEGEACGLVKNLAL+ HVT+DEE AP+ LC+ LGV D+ SGEE++ ++LV
Sbjct: 501 CPADTPEGEACGLVKNLALLCHVTSDEEPAPIKRLCFDLGVTDVSLSSGEEINHASNYLV 560
Query: 410 IFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIA 469
+ NG+I+G H PR FVT +R++RRAG IGEFVSV +++ Q VY+ASDGGRVCRPL++
Sbjct: 561 MLNGVIIGTHVNPRAFVTRLRRIRRAGLIGEFVSVMIHDVQRVVYIASDGGRVCRPLLLI 620
Query: 470 D--NGISRIKEYHMKEL 484
D +R+ + H+ EL
Sbjct: 621 DPVTHRTRLTQRHLDEL 637
>J9VRY2_CRYNH (tr|J9VRY2) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. grubii serotype A (strain H99 / ATCC 208821 / CBS
10515 / FGSC 9487) GN=CNAG_04513 PE=3 SV=1
Length = 1123
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/499 (47%), Positives = 336/499 (67%), Gaps = 15/499 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+PVMLRS C L K+EAELA++GECP+DPGGYFV+KG EKVIL+QEQLSKNRI+++ DK
Sbjct: 134 LPVMLRSDLCNLKGKNEAELARMGECPMDPGGYFVVKGTEKVILVQEQLSKNRILVMKDK 193
Query: 61 NRNIXXXXXX------------XXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAM 108
+ +V + +++L+ N F + +P+++ +KAM
Sbjct: 194 KDEVMAEVTSLDQAGILIGLVDSTHDRVVKTYVVSKANRLYLRHNSFKEFIPIVIALKAM 253
Query: 109 GMESDQEVVQMV-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKV--KRSMFSNIS 165
G+ +D+E++Q++ G D RY S EE A+ +T+ QAL + ++V ++ + S
Sbjct: 254 GLTADKEILQLICGSDERYQEAFGVSLEEAAKEKTFTRRQALEWIGARVSPNQAKDDSGS 313
Query: 166 SEKEGRGSPALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVG 225
++K A + L L ++PV NFR KCIY A M RR++ A+++ +DD+DYVG
Sbjct: 314 NQKLTPSDIAQQALAAMVLGHVPVRNMNFRPKCIYLATMSRRVLMAMIDDHMVDDRDYVG 373
Query: 226 NKRLELSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGL 285
NKRLEL+GQL+SLLFED FKT +++ DK+L+KP++A FD +++ + D IT
Sbjct: 374 NKRLELAGQLLSLLFEDSFKTFNSELKKRMDKILEKPNRAGPFDAGTLIRQGGDPITQAF 433
Query: 286 ESTLSTGNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQ 345
++STGN+ ++RF +ER G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQ
Sbjct: 434 VRSISTGNWSLKRFHVERAGVTHVLSRLSFIAALGMMTRISSQFEKTRKVSGPRALQPSQ 493
Query: 346 WGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPD 405
WGMLCP DTPEGEACGLVKNLALMTH+TTD EAPL+ L + LGVED+ ++G EL+ P
Sbjct: 494 WGMLCPSDTPEGEACGLVKNLALMTHITTDVPEAPLVKLAFMLGVEDISLVTGNELYRPG 553
Query: 406 SFLVIFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRP 465
+V NG ++G + FV RKLRRAG++ EFVS+++N +Y+ASDGGR+CRP
Sbjct: 554 VLMVQVNGTLIGVTNMAKRFVRQFRKLRRAGRMSEFVSIFINHHHKIIYIASDGGRICRP 613
Query: 466 LVIADNGISRIKEYHMKEL 484
++I + G SR+ H++ L
Sbjct: 614 MIIVEKGRSRVTTEHVRLL 632
>H2TAU8_TAKRU (tr|H2TAU8) DNA-directed RNA polymerase OS=Takifugu rubripes
GN=LOC101079289 PE=3 SV=1
Length = 1132
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/484 (50%), Positives = 330/484 (68%), Gaps = 6/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K E AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPMEFAKLNECPLDPGGYFIVKGQEKVILIQEQLSKNRIIVDQDR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++++++ + +L+ N ++ P+ ++ K MG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTNMIVKQGRFYLRHNTLSEDAPIAIIFKGMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL +L +KV+R K+ + A ++L
Sbjct: 256 GTEDYVMASFAPSLEECQKAQIFTQTQALRYLGNKVRRQRM--WGGPKKTKMEEARELLA 313
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 314 SLILTHVPVKEFNFRAKCIYLAVMVRRVILA-QGGNKVDDRDYYGNKRLELAGQLLSLLF 372
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 373 EDLFKKFNSELKKIADQIIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 429
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLSFI LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 430 MDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 489
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P+I L + LGVED+ L GEEL P F+V NG ILG R
Sbjct: 490 GLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFIVFLNGNILGVIR 549
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I G +K H
Sbjct: 550 DHQKLVGTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKGQPMVKNKH 609
Query: 481 MKEL 484
+++L
Sbjct: 610 IEDL 613
>G3PDF7_GASAC (tr|G3PDF7) DNA-directed RNA polymerase (Fragment) OS=Gasterosteus
aculeatus GN=POLR3B PE=3 SV=1
Length = 1128
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/487 (50%), Positives = 333/487 (68%), Gaps = 9/487 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K E++KL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 129 MPIMLRSSNCVLTGKTPMEVSKLNECPLDPGGYFIVKGQEKVILIQEQLSKNRIIVEQDR 188
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++++++ + +LK N ++ P+ ++ K MG+ESDQE+VQM+
Sbjct: 189 KGAVGASVTSSTHEKKSRTNMIVKQGRFYLKHNTLSEDAPIAIIFKGMGVESDQEIVQMI 248
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL +L +KV+R K+ + A ++L
Sbjct: 249 GTEEHVMASFAPSLEECQKAQIFTQTQALRYLGNKVRRQRM--WGGPKKTKMEEARELLA 306
Query: 181 EEFLSNIP---VHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
L+++P V + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+S
Sbjct: 307 SLILTHVPCRQVKEFNFRAKCIYLAVMVRRVILA-QGGNKVDDRDYYGNKRLELAGQLLS 365
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++
Sbjct: 366 LLFEDLFKKFNSELKKIADQIIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLK 422
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RF+M+R+G+TQVL RLSFI LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEG
Sbjct: 423 RFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEG 482
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TTD E+ P+I L + LGVED+ LSGEEL P FLV NG ILG
Sbjct: 483 EACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLSGEELSYPSVFLVFLNGNILG 542
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
R R ++ R +RRAG I EFVS+ N CVY++SDGGR+CRP +I G +K
Sbjct: 543 VIRDNRKLISTFRLMRRAGFITEFVSISTNLTDRCVYISSDGGRLCRPYIIVKRGQPMVK 602
Query: 478 EYHMKEL 484
H+++L
Sbjct: 603 NKHIEDL 609
>A8IY03_CHLRE (tr|A8IY03) DNA-directed RNA polymerase OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_129857 PE=3 SV=1
Length = 1161
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 257/486 (52%), Positives = 332/486 (68%), Gaps = 7/486 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLR RCVLY K+EA+LA+LGECPLDPGGYF+++G EKVILIQEQLSKNRIII D
Sbjct: 146 MPLMLRCDRCVLYNKNEAQLAQLGECPLDPGGYFIVRGTEKVILIQEQLSKNRIIIDTDS 205
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ + +IV K K++LK N F V + VV+KAMG ESDQE VQ V
Sbjct: 206 HNEVMASVTSSTHERKSKTNIVFSKGKIYLKHNAFQDDVNIFVVLKAMGCESDQEAVQAV 265
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRS--MFSNISSEKEGRGSPALKV 178
G + LL+PS +E GV+TQ QAL +L K+K S ++ + A V
Sbjct: 266 GAA-ALAALLVPSVQEAKGLGVFTQMQALDYLGGKLKASPKFGGGDQKRRKSKVDEARDV 324
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
L L ++PV + F K Y AVM+RR++ A+L+ +DD+DY GNKRLEL+G L+SL
Sbjct: 325 LAHVVLCHVPVPRYQFAQKIAYVAVMVRRMLYAVLDPACIDDRDYYGNKRLELAGGLLSL 384
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + ++ +D +L K ++A +FD++ + D IT+GLES LS+GN+ IRR
Sbjct: 385 LFEDLFKRLNSDIKRQADAVLSKANRATQFDVAKAI--RTDTITYGLESALSSGNWIIRR 442
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMERKG+TQVL RLSFI +G MTR++ QFEK+RKVSGPRAL PSQWGMLCP DTPEGE
Sbjct: 443 FRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRALHPSQWGMLCPADTPEGE 502
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
+CGLVKNLALMTHVTTDEEE PLI L LG E + ++ E+H LV NG ++G
Sbjct: 503 SCGLVKNLALMTHVTTDEEEGPLIRLLVMLGTEPITAIAPAEMHGHGGALVFLNGTLVGV 562
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
HRRP V R+LRRAG +GEFV V++ + C Y++ DGGRVCRPL+I D G+ R+++
Sbjct: 563 HRRPHRLVREARELRRAGHLGEFVHVHL-QGDAC-YISCDGGRVCRPLIICDAGVPRVRQ 620
Query: 479 YHMKEL 484
H+ +L
Sbjct: 621 EHITKL 626
>G8JXK4_ERECY (tr|G8JXK4) DNA-directed RNA polymerase OS=Eremothecium cymbalariae
(strain CBS 270.75 / DBVPG 7215 / KCTC 17166 / NRRL
Y-17582) GN=Ecym_8300 PE=3 SV=1
Length = 1141
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/488 (49%), Positives = 330/488 (67%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L E +AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 147 MPIMLRSNKCILNGASEETMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 206
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
++I V+ K EK++LK N +++VP+++V+KA G+ SD E++Q+
Sbjct: 207 KKSIVQASVTSSTHERKSKTYVVTKNEKIYLKHNSISEEVPIVIVLKACGVVSDLEIMQL 266
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G + Y + +FEE ++ +YTQ+QAL ++ +KVK ++ +EG ++
Sbjct: 267 VCGNNSSYQDIFAINFEEASKMNIYTQQQALEYIGTKVKTIRRQKLTILQEG-----IEA 321
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ AI N +DD+DYVGNKRLEL+GQL+SL
Sbjct: 322 IATTVIAHLTVEALDFREKALYIAIMTRRVVMAIQNCKMVDDRDYVGNKRLELAGQLMSL 381
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 382 LFEDLFKKFNNDFKASIDKVLKKPNRAEMYDALLSINVHSNNITSGLNRAISTGNWSLKR 441
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 442 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTSDTPEGE 501
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ LCY LGVED+ + LH D++ V NG I+G
Sbjct: 502 ACGLVKNLALMTHITTDDEEEPIKRLCYLLGVEDIGLIDSASLH--DNYGVYLNGTIIGT 559
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FV R LRR GKI EF+S+Y N Q V++ +DGGR+CRPL+I NG S +
Sbjct: 560 ARYPTKFVHQFRILRRTGKISEFISIYTNIHQNAVHIVTDGGRICRPLIIVKNGKSMVAS 619
Query: 479 YHMKELMD 486
H+K L+D
Sbjct: 620 SHLKRLLD 627
>G1PU64_MYOLU (tr|G1PU64) DNA-directed RNA polymerase OS=Myotis lucifugus PE=3
SV=1
Length = 1132
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/484 (50%), Positives = 330/484 (68%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+E DQE+VQM+
Sbjct: 196 KGTVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVECDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIVRLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I + H
Sbjct: 551 DHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKH 610
Query: 481 MKEL 484
M+EL
Sbjct: 611 MEEL 614
>M3ZHD1_XIPMA (tr|M3ZHD1) DNA-directed RNA polymerase OS=Xiphophorus maculatus
GN=POLR3B PE=3 SV=1
Length = 1132
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/484 (50%), Positives = 328/484 (67%), Gaps = 6/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K E +KL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPMEFSKLNECPLDPGGYFIVKGQEKVILIQEQLSKNRIIVEQDR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++++++ + +L+ N ++ P+ ++ K MG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTNMIVKQGRFYLRHNTLSEDAPIAIIFKGMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL L +KV+R K+ + A ++L
Sbjct: 256 GTEEHVMASFAPSLEECQKAQIFTQTQALRFLGNKVRRQRM--WGGPKKTKMEEARELLA 313
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 314 SLILTHVPVKEFNFRAKCIYLAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQLLSLLF 372
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 373 EDLFKKFNAELKKIADQIIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 429
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 430 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 489
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P+I L + LGVED+ L GEEL P FLV NG ILG R
Sbjct: 490 GLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFLVFLNGNILGVIR 549
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
R V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I G + H
Sbjct: 550 DHRKLVNTFRLMRRAGFINEFVSISTNMTDRCVYISSDGGRLCRPYIIVKKGQPMVNNKH 609
Query: 481 MKEL 484
+++L
Sbjct: 610 IEDL 613
>F2QZU4_PICP7 (tr|F2QZU4) DNA-directed RNA polymerase OS=Komagataella pastoris
(strain ATCC 76273 / CBS 7435 / CECT 11047 / NRRL
Y-11430 / Wegner 21-1) GN=PP7435_Chr4-0768 PE=3 SV=1
Length = 1158
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/491 (48%), Positives = 336/491 (68%), Gaps = 10/491 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L KDE+++A L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D
Sbjct: 155 MPIMLRSNKCILESKDESQMASLCECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADD 214
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K K++LK N +++VP+++V+KA G+ SD E++Q+
Sbjct: 215 KKQIVQASVTSSTHERKSKTYVVTKNNKIYLKHNSISEEVPIVLVLKAAGIVSDLEIMQL 274
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G D Y L +FEE A+ ++TQ AL ++ +VK R +S +EG
Sbjct: 275 VCGDDSTYQDLFTINFEEAAKLDIHTQRDALEYIGKRVKTMRRLGAPKLSIYQEG----- 329
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
++ + +++I V NFR K IY A+M RR++ A+ N +DD+DYVGNKRLEL+GQL
Sbjct: 330 VEAIANTIVAHISVEDLNFREKAIYLAIMTRRVVMAMHNPTMIDDRDYVGNKRLELAGQL 389
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
+SLLFED FK + + DK+L KP++A+ FD + H + IT G+ +STGN+
Sbjct: 390 MSLLFEDLFKKFNSDFKANIDKILKKPNRASEFDALLSINVHSNNITTGINRAISTGNWS 449
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTP
Sbjct: 450 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTSDTP 509
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTD+EE P+ +CY LG ED++ + + + +F V NG +
Sbjct: 510 EGEACGLVKNLALMTHITTDDEEEPVRKICYLLGAEDIKIVDSSVISSRSNFGVYLNGTM 569
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISR 475
+G R P FVT RKLRR+GK+ F+S+Y+N V+LA+DGGR+CRPL+I +NG+S+
Sbjct: 570 IGVIRYPTVFVTKFRKLRRSGKVSAFISIYINSHHKAVHLAADGGRICRPLIIVENGVSK 629
Query: 476 IKEYHMKELMD 486
++ +H+++L D
Sbjct: 630 VEAHHLQKLKD 640
>C4R793_PICPG (tr|C4R793) DNA-directed RNA polymerase OS=Komagataella pastoris
(strain GS115 / ATCC 20864) GN=PAS_chr4_0239 PE=3 SV=1
Length = 1158
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/491 (48%), Positives = 336/491 (68%), Gaps = 10/491 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L KDE+++A L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D
Sbjct: 155 MPIMLRSNKCILESKDESQMASLCECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADD 214
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K K++LK N +++VP+++V+KA G+ SD E++Q+
Sbjct: 215 KKQIVQASVTSSTHERKSKTYVVTKNNKIYLKHNSISEEVPIVLVLKAAGIVSDLEIMQL 274
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G D Y L +FEE A+ ++TQ AL ++ +VK R +S +EG
Sbjct: 275 VCGDDSTYQDLFTINFEEAAKLDIHTQRDALEYIGKRVKTMRRLGAPKLSIYQEG----- 329
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
++ + +++I V NFR K IY A+M RR++ A+ N +DD+DYVGNKRLEL+GQL
Sbjct: 330 VEAIANTIVAHISVEDLNFREKAIYLAIMTRRVVMAMHNPTMIDDRDYVGNKRLELAGQL 389
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
+SLLFED FK + + DK+L KP++A+ FD + H + IT G+ +STGN+
Sbjct: 390 MSLLFEDLFKKFNSDFKANIDKILKKPNRASEFDALLSINVHSNNITTGINRAISTGNWS 449
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTP
Sbjct: 450 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTSDTP 509
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTD+EE P+ +CY LG ED++ + + + +F V NG +
Sbjct: 510 EGEACGLVKNLALMTHITTDDEEEPVRKICYLLGAEDIKIVDSSVISSRSNFGVYLNGTM 569
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISR 475
+G R P FVT RKLRR+GK+ F+S+Y+N V+LA+DGGR+CRPL+I +NG+S+
Sbjct: 570 IGVIRYPTVFVTKFRKLRRSGKVSAFISIYINSHHKAVHLAADGGRICRPLIIVENGVSK 629
Query: 476 IKEYHMKELMD 486
++ +H+++L D
Sbjct: 630 VEAHHLQKLKD 640
>G0WB51_NAUDC (tr|G0WB51) DNA-directed RNA polymerase OS=Naumovozyma dairenensis
(strain ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 /
NRRL Y-12639) GN=NDAI0E01550 PE=3 SV=1
Length = 1154
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/488 (48%), Positives = 330/488 (67%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C LY DE ++AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 158 MPIMLRSNKCTLYGADEKQMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 217
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K K++LK N A+++P+++V+KA G+ SD E++Q+
Sbjct: 218 KKGIVQASVTSSTHERKSKTYVITKNGKIYLKHNSIAEEIPIVIVLKACGIVSDLEIMQL 277
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE A+ +YTQ+QAL + +KVK +S +EG ++
Sbjct: 278 VCGNDSSYQDIFAVNLEEAAKLNLYTQQQALEFIGAKVKTMRRQKLSILQEG-----IEA 332
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ AI N +DD+DYVGNKRLEL+GQ++SL
Sbjct: 333 IATTVVAHLTVEALDFREKALYMAMMTRRVVMAIHNPKMVDDRDYVGNKRLELAGQMVSL 392
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + + DK+L+KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 393 LFEDLFKKFNSDFKATIDKVLEKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKR 452
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 453 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 512
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+T+D+EE P+ +CY LGVED+ + LH +F V NG ++G
Sbjct: 513 ACGLVKNLALMTHITSDDEEEPIKRVCYVLGVEDISLIDSASLHL--NFGVYLNGTLIGT 570
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FV+ R LRR GK+ EF+S+Y N Q V++A+DGGR+CRPL+I NG S +
Sbjct: 571 TRFPIKFVSQFRHLRRTGKVSEFISIYTNSHQKAVHIATDGGRICRPLIIVTNGKSHVTA 630
Query: 479 YHMKELMD 486
H++ L++
Sbjct: 631 DHLRSLLE 638
>E7R6J2_PICAD (tr|E7R6J2) DNA-directed RNA polymerase OS=Pichia angusta (strain
ATCC 26012 / NRRL Y-7560 / DL-1) GN=HPODL_2223 PE=3 SV=1
Length = 1138
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/495 (48%), Positives = 331/495 (66%), Gaps = 18/495 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L K+EA++A L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 136 MPIMLRSNKCILNGKNEAQMAYLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+NI V+ K +K++LK N ++++P+++V+KA G+ SD E++Q+
Sbjct: 196 KKNIVQASVTSSTHERKSKTYVVTKNDKIYLKHNSISEEIPIVIVLKAAGLVSDLEILQL 255
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y L +FEE A+ G+Y+Q++AL ++ KVK N +P L +
Sbjct: 256 VCGNDSVYQDLFAVNFEEAAKLGIYSQKEALEYIGRKVKTIRRLN---------APKLSI 306
Query: 179 LEE-------EFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLEL 231
L+E +++I V +F+ K +Y A+M RR++ A+ N +DD+DYVGNKRLEL
Sbjct: 307 LQEGIEAIATTVIAHITVENLDFKEKALYIAIMTRRVIMAMHNPKLVDDRDYVGNKRLEL 366
Query: 232 SGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLST 291
+GQL+SLLFED FK + + DK+L KP + + FD + H IT GL +ST
Sbjct: 367 AGQLMSLLFEDLFKKFNNDFKANLDKILKKPSRVSEFDALLHINIHSSNITTGLNRAIST 426
Query: 292 GNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCP 351
GN+ ++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC
Sbjct: 427 GNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCT 486
Query: 352 CDTPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIF 411
DTPEGEACGLVKNLALMTH+TTD+EE P+ LCY LG ED+ + LH +F V
Sbjct: 487 SDTPEGEACGLVKNLALMTHITTDDEEDPIKKLCYILGAEDISVIDSSTLHNNGTFGVHL 546
Query: 412 NGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADN 471
NG ++G R P FV+ R LRR GK+ FVS++ N Q V++A+DGGR+CRPL+I +N
Sbjct: 547 NGTLIGTTRFPNVFVSKFRHLRRTGKLSAFVSIFTNVHQSAVHIAADGGRICRPLIIVEN 606
Query: 472 GISRIKEYHMKELMD 486
G +++ H+K L D
Sbjct: 607 GKAKVTAEHLKRLRD 621
>G0VBC8_NAUCC (tr|G0VBC8) DNA-directed RNA polymerase OS=Naumovozyma castellii
(strain ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL
Y-12630) GN=NCAS0B01700 PE=3 SV=1
Length = 1150
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/488 (49%), Positives = 328/488 (67%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C LY DE E+AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 154 MPIMLRSNKCTLYGIDEKEMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 213
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K +K++LK N +++P+++V+KA G+ SD E++Q+
Sbjct: 214 KKGIVQASVTSSTHERRSKTYVITKNDKIYLKHNSITEEIPIVIVLKACGVVSDLEIMQL 273
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE ++ +YTQ+QAL + +KVK +S +EG ++
Sbjct: 274 VCGNDSSYQDIFAVNLEEASRLNIYTQQQALEFIGTKVKTMRRQKLSVLQEG-----IEA 328
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ AI N +DD+DYVGNKRLEL+GQLISL
Sbjct: 329 IATTVVAHLTVEALDFREKALYMAMMTRRVVMAIQNPKMVDDRDYVGNKRLELAGQLISL 388
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + + DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 389 LFEDLFKKFNSDFKATIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKR 448
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 449 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 508
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ LCY LGVED+ + LH +F V NG ++G
Sbjct: 509 ACGLVKNLALMTHITTDDEEEPIKRLCYILGVEDVSLIDSASLHL--NFGVYLNGTLIGT 566
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FV+ R LRR GKI EF+S+Y N Q V++A+DGGR+CRPL+I G S +
Sbjct: 567 TRFPIKFVSQFRHLRRTGKISEFISIYANSHQKAVHIATDGGRICRPLIIVTKGKSHVTA 626
Query: 479 YHMKELMD 486
H++ L++
Sbjct: 627 DHLRRLLN 634
>G8BMQ9_TETPH (tr|G8BMQ9) DNA-directed RNA polymerase OS=Tetrapisispora phaffii
(strain ATCC 24235 / CBS 4417 / NBRC 1672 / NRRL Y-8282
/ UCD 70-5) GN=TPHA0A01020 PE=3 SV=1
Length = 1142
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/488 (49%), Positives = 330/488 (67%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L D+ +AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 148 MPIMLRSNKCILNGADQKVMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 207
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
++I V+ K K++LK N A++VP+ +++KA G+ SD E++Q+
Sbjct: 208 KKSIVQASVTSSTHERKSKTYVVTKNGKIYLKHNSIAEEVPIAIILKACGIVSDLEIMQL 267
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE + + TQ+QAL ++ SKVK +S +EG ++
Sbjct: 268 VCGNDSSYQDIFAINLEEAVKLNISTQQQALEYIGSKVKTIRRQKLSILQEG-----IEA 322
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ AI N +DD+DYVGNKRLEL+GQLISL
Sbjct: 323 IATTVIAHLTVEALDFREKALYIAMMTRRVVMAIENPKMVDDRDYVGNKRLELAGQLISL 382
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 383 LFEDLFKKFNSDFKASIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKR 442
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 443 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 502
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ LCY LGVED+ + LH ++ V NG ++G
Sbjct: 503 ACGLVKNLALMTHITTDDEEDPIKKLCYMLGVEDITLIDSASLHL--NYGVHLNGTLIGT 560
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FV+ R+LRR G++ EFVS+Y N Q V++A+DGGR+CRPL+I NG S +K
Sbjct: 561 TRFPLNFVSQFRQLRRTGRVSEFVSIYTNSHQQAVHIATDGGRICRPLIIVSNGKSHVKA 620
Query: 479 YHMKELMD 486
H+KEL++
Sbjct: 621 EHLKELLE 628
>F0W7T0_9STRA (tr|F0W7T0) DNA-directed RNA polymerase OS=Albugo laibachii Nc14
GN=AlNc14C31G2883 PE=3 SV=1
Length = 1177
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/492 (48%), Positives = 328/492 (66%), Gaps = 10/492 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS CVL K+ +LA L ECP DPGGYF++KG EKV+LI EQLSKNR+I+ +D
Sbjct: 149 IPIMLRSANCVLTGKNHTQLAALKECPYDPGGYFIVKGVEKVVLIHEQLSKNRVILELDP 208
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+NI +I ++ +++LK N F +P++ +++ MGME DQE++ ++
Sbjct: 209 KQNICASITSSTHERKSRTNIFLKGGRIYLKSNSFGSDIPIIAILRGMGMEHDQEIIDLI 268
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSP------ 174
G +P LL SFE+ ++ ++TQ QAL ++ SK+ +S G P
Sbjct: 269 GSEPNIMDALLASFEQVSELKLFTQLQALEYIGSKMTSQSRGKANSRNGGASQPTNIAET 328
Query: 175 ALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQ 234
A L L+++P FRLKC+Y A ++RRI+ ++ +DDKDY GNKRLEL+GQ
Sbjct: 329 ARAALANLVLNHVPCEIDQFRLKCVYIAHIVRRIIFTDRDRTRLDDKDYYGNKRLELAGQ 388
Query: 235 LISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNF 294
L+SLLFED FK ++ +D +L KP++A+ FDI + D IT G L+TGN+
Sbjct: 389 LLSLLFEDLFKRFNSDLKRQADMILSKPNRASMFDIVKCI--RTDTITQGFIHALATGNW 446
Query: 295 EIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 354
++RFRM+R G+T VL RLS++ LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DT
Sbjct: 447 TLKRFRMDRAGVTHVLSRLSYMSALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPADT 506
Query: 355 PEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGL 414
PEGEACGLVKNLAL+ HVT+DEE P+ LC+ LGV D+ SGE L+ ++L++ NG+
Sbjct: 507 PEGEACGLVKNLALLCHVTSDEESDPIRRLCFDLGVTDVCLCSGEALNHRSNYLIMLNGI 566
Query: 415 ILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGIS 474
I+G H PR FVT +R++RRAG IGEFVSV +++ Q VY+ASDGGRVCRPL++ D
Sbjct: 567 IIGTHGDPRMFVTKLRRIRRAGLIGEFVSVMIHDVQRVVYIASDGGRVCRPLLLIDPKTH 626
Query: 475 RIK--EYHMKEL 484
R K M+EL
Sbjct: 627 RPKLSSRQMREL 638
>F0VIW5_NEOCL (tr|F0VIW5) DNA-directed RNA polymerase OS=Neospora caninum (strain
Liverpool) GN=NCLIV_034580 PE=3 SV=1
Length = 1366
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 253/524 (48%), Positives = 338/524 (64%), Gaps = 41/524 (7%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+PVMLRS CVL+ KD A + KLGECP DPGGYF++KG EKV+L+QEQLSKNRII+ D
Sbjct: 301 IPVMLRSQVCVLHGKDPAAIQKLGECPFDPGGYFIVKGTEKVLLMQEQLSKNRIIVETDM 360
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
N+ +V++ K++L+ N F +P +V++AMG E+DQE++QM+
Sbjct: 361 KHNVCATVTSATAESKSRTAVVLKNNKLYLRHNSFLDDLPACIVLRAMGTETDQEIMQMI 420
Query: 121 GRDPRYSLL--------LLPSFEECAQNGVYTQEQALAHLDSKVKRSM-----FSNIS-- 165
G S + + S ++C V TQ QAL + S+++ M F+ +S
Sbjct: 421 GAGASLSDVTGNTAQEAVSLSLQDCHTENVLTQYQALLWVGSRIRPKMQAKGFFTPVSRG 480
Query: 166 ---SEKEGRGS--------PALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILN 214
SE+ G GS A+ VL LS+I +FR K + +M+RR++DA +
Sbjct: 481 PLLSERSGGGSRSAKSVIDEAVDVLHRVVLSHIETTGNDFRAKSRFLCLMIRRVLDAAND 540
Query: 215 KDAMDDKDYVGNKRLELSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVL 274
MDDKDY GNKRLEL+GQL+SLLFED FK V+ +D L + +A R +
Sbjct: 541 PSLMDDKDYYGNKRLELAGQLLSLLFEDLFKRFCTHVKKQADYALSRYHQA-RGGAAGGG 599
Query: 275 ARHQ--------------DLITHGLESTLSTGNFEIRRFRMERKGMTQVLQRLSFIGFLG 320
+R + D+IT G+++ LSTGN+ I+RFRMER G++QVL RLS+I LG
Sbjct: 600 SRLKDEVPYPDCFRNLPTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLG 659
Query: 321 QMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAP 380
MTR++ QFEK RKVSGPRALQPSQWGMLCPCDTPEGE+CGLVKNLAL+THVTTDE+ P
Sbjct: 660 MMTRINSQFEKGRKVSGPRALQPSQWGMLCPCDTPEGESCGLVKNLALVTHVTTDEDPTP 719
Query: 381 LISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHRRPRGFVTAMRKLRRAGKIGE 440
+ SL + LGVED + +SGEELH ++LV+ NG +LG HRRPR + +R LRR G++GE
Sbjct: 720 IASLAFCLGVEDADAISGEELHDRGTYLVMLNGSLLGVHRRPRQLMKNIRLLRRHGEVGE 779
Query: 441 FVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYHMKEL 484
FVSV+VNE VY+ASDGGR+CRPL++ D G R+ HM +L
Sbjct: 780 FVSVHVNEAHKTVYIASDGGRLCRPLIVVDRGRPRLLPEHMAQL 823
>Q75B52_ASHGO (tr|Q75B52) DNA-directed RNA polymerase OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=AGOS_ADL275C PE=3 SV=2
Length = 1141
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 240/488 (49%), Positives = 330/488 (67%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L E +AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 147 MPIMLRSNKCILNGASEEVMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 206
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K +K++LK N A++VP+++V+KA G+ SD E++Q+
Sbjct: 207 KKAIVQASVTSSTHERKSKTYVVTKNDKIYLKHNSIAEEVPIVIVLKACGIVSDLEIMQL 266
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + +FEE ++ +YTQ+QAL ++ +KVK ++ +EG ++
Sbjct: 267 VCGNDSSYQDIFAINFEEASKMNIYTQQQALEYIGTKVKTIRRQKLTVLQEG-----IEA 321
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ AI N +DD+DYVGNKRLEL+GQL+SL
Sbjct: 322 IATTVIAHLTVEALDFREKALYVAMMTRRVIMAIHNPKMVDDRDYVGNKRLELAGQLMSL 381
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 382 LFEDLFKKFNNDFKASIDKVLKKPNRAEMYDALLSINVHSNNITSGLNRAISTGNWSLKR 441
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 442 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTSDTPEGE 501
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ +LCY LGVED+ L +H ++ V NG I+G
Sbjct: 502 ACGLVKNLALMTHITTDDEEEPIKNLCYLLGVEDITLLDSASIHL--NYGVYLNGTIIGT 559
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FV R LRR GK+ EF+S+Y N Q V++A+DGGR+CRPL+I NG S +
Sbjct: 560 TRFPARFVNQFRLLRRTGKVSEFISIYTNSHQKAVHIATDGGRICRPLIIVRNGKSMVTA 619
Query: 479 YHMKELMD 486
H++ L++
Sbjct: 620 GHLRRLLE 627
>M9N2Z7_ASHGS (tr|M9N2Z7) FADL275Cp OS=Ashbya gossypii FDAG1 GN=FAGOS_FADL275C
PE=4 SV=1
Length = 1141
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 240/488 (49%), Positives = 330/488 (67%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L E +AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 147 MPIMLRSNKCILNGASEEVMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 206
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K +K++LK N A++VP+++V+KA G+ SD E++Q+
Sbjct: 207 KKAIVQASVTSSTHERKSKTYVVTKNDKIYLKHNSIAEEVPIVIVLKACGIVSDLEIMQL 266
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + +FEE ++ +YTQ+QAL ++ +KVK ++ +EG ++
Sbjct: 267 VCGNDSSYQDIFAINFEEASKMNIYTQQQALEYIGTKVKTIRRQKLTVLQEG-----IEA 321
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ AI N +DD+DYVGNKRLEL+GQL+SL
Sbjct: 322 IATTVIAHLTVEALDFREKALYVAMMTRRVIMAIHNPKMVDDRDYVGNKRLELAGQLMSL 381
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 382 LFEDLFKKFNNDFKASIDKVLKKPNRAEMYDALLSINVHSNNITSGLNRAISTGNWSLKR 441
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 442 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTSDTPEGE 501
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ +LCY LGVED+ L +H ++ V NG I+G
Sbjct: 502 ACGLVKNLALMTHITTDDEEEPIKNLCYLLGVEDITLLDSASIHL--NYGVYLNGTIIGT 559
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FV R LRR GK+ EF+S+Y N Q V++A+DGGR+CRPL+I NG S +
Sbjct: 560 TRFPARFVNQFRLLRRTGKVSEFISIYTNSHQKAVHIATDGGRICRPLIIVRNGKSMVTA 619
Query: 479 YHMKELMD 486
H++ L++
Sbjct: 620 GHLRRLLE 627
>I2GYQ1_TETBL (tr|I2GYQ1) DNA-directed RNA polymerase OS=Tetrapisispora blattae
(strain ATCC 34711 / CBS 6284 / DSM 70876 / NBRC 10599 /
NRRL Y-10934 / UCD 77-7) GN=TBLA0B04150 PE=3 SV=1
Length = 1148
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 239/488 (48%), Positives = 334/488 (68%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L DE +A+L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 153 MPIMLRSNKCILNGCDEQMMARLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 212
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ + V+ K +K++LK N ++ VP+ +V+KA G+ SD E++Q+
Sbjct: 213 KKGVVQASVTSSTHERKSKTYVVTKNDKIYLKHNSISEDVPIAIVLKAAGIVSDLEILQL 272
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE A+ +YTQ+QAL ++ +KVK +++ +EG ++
Sbjct: 273 VCGNDSSYQDIFAVNLEEAAKFKIYTQQQALEYIGTKVKTIRKQKLTALQEG-----IEA 327
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V + +FR K +Y A+M RR++ AI N +DD+DYVGNKRLEL+GQLISL
Sbjct: 328 IATTVIAHLTVEELDFREKALYIAMMTRRVVMAIHNPKMVDDRDYVGNKRLELAGQLISL 387
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL ++STGN+ ++R
Sbjct: 388 LFEDLFKKFTSDFKMSIDKVLKKPNRAMEYDALLSINVHCNNITSGLNRSISTGNWSLKR 447
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 448 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 507
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ LCY LGVED+ L +H +S+ V NG ++G
Sbjct: 508 ACGLVKNLALMTHITTDDEEDPIKKLCYVLGVEDISSLDSATIH--ESYGVHLNGTLVGT 565
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FVT R LRRAGK+ F+S+Y N Q V++A+DGGR+CRPL++ + G S +K
Sbjct: 566 TRFPNKFVTQFRDLRRAGKVSAFISIYTNSHQQAVHIATDGGRICRPLIVIEKGKSLVKA 625
Query: 479 YHMKELMD 486
H+++L++
Sbjct: 626 EHLRDLLN 633
>M2VX80_GALSU (tr|M2VX80) DNA-directed RNA polymerase OS=Galdieria sulphuraria
GN=Gasu_46620 PE=3 SV=1
Length = 1158
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 240/487 (49%), Positives = 320/487 (65%), Gaps = 7/487 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS C+L K + +LA LGECPLDPGGYF+I+G E+VILIQEQLSKNRIII DK
Sbjct: 154 IPIMLRSSHCILTGKKDGQLASLGECPLDPGGYFIIRGTERVILIQEQLSKNRIIIEEDK 213
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
N +V + ++L+ N +P+ +V KA+ +ESDQE+VQ++
Sbjct: 214 KGNYCATVTSSTHERKSRTSLVYKSNNIYLRHNSLVDDIPIWIVFKALEVESDQEIVQLI 273
Query: 121 G---RDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALK 177
G + R LL +EC V + +AL ++ S+V+ +F S + A +
Sbjct: 274 GLIEEEYRSYYFLLNHKKECISRHVQNRNEALEYIGSRVR--LFRKGYSFRRSTIEEAQE 331
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
VL LS+IP +Q NFR K IY A M+RR++ N +DDKDY GNKRLEL+GQL+S
Sbjct: 332 VLAGVILSHIPTYQHNFRNKSIYLAFMVRRLLTVAENLTTVDDKDYYGNKRLELAGQLLS 391
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ +D +L KP++A +FDI V D I+ GLE+ + TGN+ ++
Sbjct: 392 LLFEDLFKKFNADLKRHADMVLSKPNRAAQFDI--VKCMRPDTISVGLENAIGTGNWTVK 449
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRM R G+TQVL RLS+I LG MTR++ QFEK+RK+SGPR+LQ SQWG+LCP DTPEG
Sbjct: 450 RFRMHRAGITQVLSRLSYIAALGMMTRITSQFEKTRKISGPRSLQGSQWGLLCPSDTPEG 509
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
E+CGLVKNLAL H+TTD EE PLI LCY LGVED SG+EL+ P F + NG LG
Sbjct: 510 ESCGLVKNLALTAHITTDAEEEPLIRLCYILGVEDATLFSGDELNNPSHFRIFLNGKFLG 569
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
HR F R LRR G IGEFVS++VNE + VYL+ D GR+CRPL+I +NG ++
Sbjct: 570 IHRNASYFANIFRFLRRKGAIGEFVSIFVNEAENVVYLSCDSGRICRPLIIVENGKPKVT 629
Query: 478 EYHMKEL 484
+ ++++L
Sbjct: 630 QQYIEQL 636
>D8UAV8_VOLCA (tr|D8UAV8) DNA-directed RNA polymerase OS=Volvox carteri
GN=VOLCADRAFT_66175 PE=3 SV=1
Length = 1154
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/495 (50%), Positives = 330/495 (66%), Gaps = 32/495 (6%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLR RCVLY K+EA+LA+LGECPLDPGGYF+++G EKVILIQEQLSKNRII+ D
Sbjct: 152 MPLMLRCDRCVLYGKNEAQLAQLGECPLDPGGYFIVRGTEKVILIQEQLSKNRIIVDTDS 211
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ + +IV K K++LK N F V +MVV+KAMG ESDQEVVQ V
Sbjct: 212 HGEVIASVTSSTHERKSKTNIVFSKGKIYLKHNAFQDDVNIMVVLKAMGCESDQEVVQAV 271
Query: 121 -----------GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKE 169
GRD L GV+TQ QAL +L +++++ S + ++
Sbjct: 272 VGGGFGVRAASGRDGGLDAKSL---------GVFTQMQALDYLGTRLRKRRKSKVDEARD 322
Query: 170 GRGSPALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRL 229
VL L ++PV + F K Y AVMMRR++ A+L+ +DD+DY GNKRL
Sbjct: 323 --------VLANVVLCHVPVPRYQFAHKIAYVAVMMRRMLYAVLDPACIDDRDYYGNKRL 374
Query: 230 ELSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTL 289
EL+G L+SLLFED FK + ++ +D +L K ++A +FD++ + D IT+GLES L
Sbjct: 375 ELAGALMSLLFEDLFKRLNSDIKRQADSVLSKANRATQFDVAKAI--RTDTITYGLESAL 432
Query: 290 STGNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGML 349
S+GN+ I+RFRMERKG+TQVL RLSFI +G MTR++ QFEK+RKVSGPRAL PSQWGML
Sbjct: 433 SSGNWIIKRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRALHPSQWGML 492
Query: 350 CPCDTPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLV 409
CP DTPEGE+CGLVKNLALMTHVTTDEEE + L LG E + L+ E+H LV
Sbjct: 493 CPADTPEGESCGLVKNLALMTHVTTDEEEVSICRLLVMLGTEPITSLAPAEMHGQGGALV 552
Query: 410 IFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIA 469
NG ++G HRRP V +R+LRRAG +GEFV V++ +Q Y+++DGGRVCRPL+I
Sbjct: 553 FLNGNLVGVHRRPHRLVKEVRELRRAGHLGEFVHVHL--QQDACYVSADGGRVCRPLIIC 610
Query: 470 DNGISRIKEYHMKEL 484
D G+ R+++ H+ +L
Sbjct: 611 DAGVPRVRQEHITKL 625
>M5EBC0_MALSM (tr|M5EBC0) Genomic scaffold, msy_sf_12 OS=Malassezia sympodialis
ATCC 42132 GN=MSY001_2652 PE=4 SV=1
Length = 1135
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/486 (46%), Positives = 332/486 (68%), Gaps = 4/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +C L +D+A LA++ ECPLDPGGYFV+KG EKVIL+QEQLSKNRI++ D
Sbjct: 135 LPIMLRSNKCWLAGQDDATLARMNECPLDPGGYFVVKGTEKVILVQEQLSKNRILVEADS 194
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKM-WLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ + V+ K + ++K N + +P+++V +A+G++SD+E++Q+
Sbjct: 195 RKGLVQASVTSSTHERKSKSYVLTKHGLLYVKHNSLHEDIPIVIVFRALGIQSDKEILQL 254
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G+D Y+ L + E A+ V+T++QAL ++ ++VK + + AL+V
Sbjct: 255 VAGQDETYAELFAINLERAAKLEVFTRKQALDYIGARVK--ILRRGVGLRRAPSDEALEV 312
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
L ++++PV +FR K +Y A M+RR++ ++++ +DD+DYVGNKRLEL+GQL++L
Sbjct: 313 LATVIMAHVPVVNDDFRHKAMYIAAMVRRVLVCMVDESKVDDRDYVGNKRLELAGQLLAL 372
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L KP++ FD + H D IT G +STGN+ ++R
Sbjct: 373 LFEDLFKKFNHDLKTNIDKVLKKPNRTAEFDAYNQFFYHGDYITAGFVRAISTGNWSLKR 432
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQ SQWGMLCP DTPEGE
Sbjct: 433 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPRALQSSQWGMLCPSDTPEGE 492
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD +EAP++ LCY LG+ED+ L+G EL+ P +++V NG +LG
Sbjct: 493 ACGLVKNLALMTHITTDVDEAPIVRLCYTLGLEDIHLLTGAELYHPSTYVVYLNGHVLGV 552
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
+ P FV R+LRRAG + EFV +Y N V++ASDGGR+CRP++I +G ++
Sbjct: 553 TQTPHRFVAQFRRLRRAGCMSEFVGIYTNVHHQTVHIASDGGRICRPMIIVQHGRPQVTS 612
Query: 479 YHMKEL 484
H++ L
Sbjct: 613 EHIRRL 618
>J8TY60_TRIAS (tr|J8TY60) DNA-directed RNA polymerase OS=Trichosporon asahii var.
asahii (strain ATCC 90039 / CBS 2479 / JCM 2466 / KCTC
7840 / NCYC 2677 / UAMH 7654) GN=A1Q1_00039 PE=3 SV=1
Length = 1213
Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/495 (49%), Positives = 334/495 (67%), Gaps = 17/495 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS C L K++ ELA++GECPLDPGGYFV+KG EKVIL+QEQLSKNRII++ D
Sbjct: 217 LPIMLRSDLCHLAGKNDLELARMGECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVMTDP 276
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+++ V K +++L+ + F + +P+++ +KAMG+ SD+E++Q+
Sbjct: 277 KKDVTTAEVTSSTHDRVVKTYVTTKASRLYLRHSSFKEPIPIVIALKAMGVTSDKEILQL 336
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRG-----S 173
V G D +Y S EE A+ VYT+ +AL + ++V + + EKE R +
Sbjct: 337 VCGPDEKYQEAFGMSLEEAARLRVYTRREALEWIGARV------SPTQEKEDRSLGHKLT 390
Query: 174 P---ALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLE 230
P A++ L L ++PV NFR K IY A M RR++ A+L+++ +DD+DYVGNKRLE
Sbjct: 391 PTDMAMQALAAMVLGHVPVRDMNFRPKAIYLATMSRRVLAAMLDENMVDDRDYVGNKRLE 450
Query: 231 LSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVL-ARHQDLITHGLESTL 289
L+GQL+SLLFED FKT ++ DK+L+K +A FD S+++ D+IT ++
Sbjct: 451 LAGQLLSLLFEDSFKTFNSDLKKRMDKILEKKTRAGPFDASTLVRTGGGDIITSAFVRSI 510
Query: 290 STGNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGML 349
STGN+ ++RF +ER G+T VL RLSFI LG MTR++ QFEK+RKVSGPRALQPSQWGML
Sbjct: 511 STGNWSLKRFHVERAGVTHVLSRLSFIAALGMMTRITSQFEKTRKVSGPRALQPSQWGML 570
Query: 350 CPCDTPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLV 409
CP DTPEGEACGLVKNLALMTH+TTD E PLI L + LG ED+ +G EL+ LV
Sbjct: 571 CPSDTPEGEACGLVKNLALMTHITTDVPEDPLIKLAFMLGAEDISLATGNELYRDGVHLV 630
Query: 410 IFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIA 469
NG ++G PR FV RKLRR+G+ EFVS+Y+N Q +Y+ASDGGR+CRPL+I
Sbjct: 631 QVNGNLIGVTALPRKFVRTFRKLRRSGRTSEFVSIYINHHQRVIYIASDGGRICRPLIIV 690
Query: 470 DNGISRIKEYHMKEL 484
+NG R+ HM+ L
Sbjct: 691 ENGRPRVTSEHMQLL 705
>C5DEU3_LACTC (tr|C5DEU3) DNA-directed RNA polymerase OS=Lachancea thermotolerans
(strain ATCC 56472 / CBS 6340 / NRRL Y-8284)
GN=KLTH0D09812g PE=3 SV=1
Length = 1144
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/488 (48%), Positives = 334/488 (68%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L E ++AK+ ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 150 MPIMLRSNKCILNGASEKDMAKINECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 209
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K +K++LK N A++VP+++V+KA G+ SD E++Q+
Sbjct: 210 KKAIVQASVTSSTHERKSKTYVITKNDKIYLKHNSIAEEVPIVLVLKACGIVSDLEIMQL 269
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + +FEE A+ +YTQ+QAL ++ SKVK +S+ +EG ++
Sbjct: 270 VCGNDSSYQDIFAVNFEEVAKMKIYTQQQALEYIGSKVKTVRRQKLSTLQEG-----IEA 324
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y AVM RR++ A+ N +DD+DYVGNKRLEL+GQL+SL
Sbjct: 325 IATTVIAHLTVEALDFREKALYIAVMTRRVVMAMHNPKMVDDRDYVGNKRLELAGQLMSL 384
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + + DK+L KP++A +D + H + I+ GL +STGN+ ++R
Sbjct: 385 LFEDLFKKFNNDFKANIDKVLKKPNRAMEYDALLSINVHSNNISSGLNRAISTGNWSLKR 444
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 445 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTSDTPEGE 504
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ LC+ LGVE + + + LH ++ V NG I+G
Sbjct: 505 ACGLVKNLALMTHITTDDEEEPIKKLCFLLGVECINVVDSDSLHL--NYCVYLNGTIVGV 562
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FV+ R LRR+GK+ EF+S+Y N Q V++A+DGGR+CRPL+I + G S +
Sbjct: 563 IRFPTKFVSHFRNLRRSGKVSEFISIYTNSHQKAVHIATDGGRICRPLIIVNEGKSLVTA 622
Query: 479 YHMKELMD 486
H+++L+D
Sbjct: 623 QHLRQLLD 630
>F8PML0_SERL3 (tr|F8PML0) DNA-directed RNA polymerase OS=Serpula lacrymans var.
lacrymans (strain S7.3) GN=SERLA73DRAFT_84701 PE=3 SV=1
Length = 1162
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/484 (47%), Positives = 328/484 (67%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +C+L K+EA+LA++ ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ D
Sbjct: 144 LPIMLRSNKCILTGKNEAQLARMTECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVETDS 203
Query: 61 NRNIXXXXXXXXXXXXXXXD--IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQ 118
+ + + +K K++L+ N + VP+++ +KA+G+++D+E++
Sbjct: 204 VKGVVQASCTSSTHGGLKSKTYVATKKGKIYLRHNSIHEDVPIVIALKALGIQADKEILL 263
Query: 119 MV-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALK 177
+ G Y + EE A+ GV+T QAL + ++VK + + + AL+
Sbjct: 264 LTAGNTEAYKSAFSANLEEAAKLGVFTHHQALEWIGTRVKVN--RKVVGPRRPAWEEALE 321
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
L L+++PV + R K I+ A M RR++ A+ ++ +DD+DYVGNKRLEL+GQL++
Sbjct: 322 ALATIVLAHVPVKGLDLRSKAIFVATMTRRVLMAMDDEKMVDDRDYVGNKRLELAGQLLA 381
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FKT +++S DK+L KP + N FD + + D IT G +STGN+ ++
Sbjct: 382 LLFEDLFKTFNSNLKSSIDKVLKKPSRTNEFDAFNTMQFQGDHITSGFIRAISTGNWSLK 441
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RF+MER G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEG
Sbjct: 442 RFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEG 501
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TTD EE P++ L + LGVED+ +G E++ P +F+V NG I+G
Sbjct: 502 EACGLVKNLALMTHITTDVEEEPIVRLAFMLGVEDISLATGTEIYGPHTFVVNVNGTIVG 561
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
R P FV+ R+LRRAG++ EFV VY+N V++ASDGGR+CRP++I ++G R+
Sbjct: 562 LTRYPTRFVSNFRRLRRAGRLSEFVGVYINHHHHAVHIASDGGRICRPMIIVESGRPRVT 621
Query: 478 EYHM 481
H+
Sbjct: 622 SDHI 625
>F8NL30_SERL9 (tr|F8NL30) DNA-directed RNA polymerase OS=Serpula lacrymans var.
lacrymans (strain S7.9) GN=SERLADRAFT_359856 PE=3 SV=1
Length = 1162
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/484 (47%), Positives = 328/484 (67%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +C+L K+EA+LA++ ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ D
Sbjct: 144 LPIMLRSNKCILTGKNEAQLARMTECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVETDS 203
Query: 61 NRNIXXXXXXXXXXXXXXXD--IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQ 118
+ + + +K K++L+ N + VP+++ +KA+G+++D+E++
Sbjct: 204 VKGVVQASCTSSTHGGLKSKTYVATKKGKIYLRHNSIHEDVPIVIALKALGIQADKEILL 263
Query: 119 MV-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALK 177
+ G Y + EE A+ GV+T QAL + ++VK + + + AL+
Sbjct: 264 LTAGNTEAYKSAFSANLEEAAKLGVFTHHQALEWIGTRVKVN--RKVVGPRRPAWEEALE 321
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
L L+++PV + R K I+ A M RR++ A+ ++ +DD+DYVGNKRLEL+GQL++
Sbjct: 322 ALATIVLAHVPVKGLDLRSKAIFVATMTRRVLMAMDDEKMVDDRDYVGNKRLELAGQLLA 381
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FKT +++S DK+L KP + N FD + + D IT G +STGN+ ++
Sbjct: 382 LLFEDLFKTFNSNLKSSIDKVLKKPSRTNEFDAFNTMQFQGDHITSGFIRAISTGNWSLK 441
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RF+MER G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEG
Sbjct: 442 RFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEG 501
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TTD EE P++ L + LGVED+ +G E++ P +F+V NG I+G
Sbjct: 502 EACGLVKNLALMTHITTDVEEEPIVRLAFMLGVEDISLATGTEIYGPHTFVVNVNGTIVG 561
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
R P FV+ R+LRRAG++ EFV VY+N V++ASDGGR+CRP++I ++G R+
Sbjct: 562 LTRYPTRFVSNFRRLRRAGRLSEFVGVYINHHHHAVHIASDGGRICRPMIIVESGRPRVT 621
Query: 478 EYHM 481
H+
Sbjct: 622 SDHI 625
>Q4WKH4_ASPFU (tr|Q4WKH4) DNA-directed RNA polymerase OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=AFUA_1G02460 PE=3 SV=1
Length = 1200
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/488 (47%), Positives = 341/488 (69%), Gaps = 4/488 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +CVL K +E+ L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D
Sbjct: 195 MPIMLRSSKCVLANKTPSEMTVLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVETDP 254
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+++K+K+++K N ++ +P++++++AMG+ ++QE++ +
Sbjct: 255 KKEIVQASVTSSSNERKSKSYIILKKDKLYVKHNVLSEDIPIVILLRAMGIHTEQEMLLL 314
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEE + G+YTQ+QAL + +++K + SS + A++
Sbjct: 315 VAGVDSLYQDDFAINFEESIKLGIYTQQQALDWIGARIK--INRKQSSYRRTHIQEAVEA 372
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +S+I V NFR K +Y A M RR++ A + +DD+DY+GNKRLEL+GQL++L
Sbjct: 373 IASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKRLELAGQLLAL 432
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L+K ++A +FD +V++ H + IT G+ +STGN+ ++R
Sbjct: 433 LFEDLFKKFCFDIKMNIDKVLNKRNRAEQFDAWTVMSMHSNHITQGMNRAISTGNWSLKR 492
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEGE
Sbjct: 493 FRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPADTPEGE 552
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT++EE P+ +L + LG ED+ L G++L+ P S+ + NG +
Sbjct: 553 ACGLVKNLALMTHITTNDEEGPIKNLVFMLGAEDIMALGGKQLYIPGSYTISINGTPIAL 612
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRP+ F+ A R+LRR G+I EFVS+Y+N Q V++A+D GR+CRPL++ +NG S +K+
Sbjct: 613 TRRPKYFLNAFRRLRRMGRISEFVSIYINHHQCAVHIATDDGRICRPLIVVENGRSLVKD 672
Query: 479 YHMKELMD 486
+H+++L D
Sbjct: 673 HHLEKLRD 680
>B0XMI5_ASPFC (tr|B0XMI5) DNA-directed RNA polymerase OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_002850
PE=3 SV=1
Length = 1200
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/488 (47%), Positives = 341/488 (69%), Gaps = 4/488 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +CVL K +E+ L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D
Sbjct: 195 MPIMLRSSKCVLANKTPSEMTVLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVETDP 254
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+++K+K+++K N ++ +P++++++AMG+ ++QE++ +
Sbjct: 255 KKEIVQASVTSSSNERKSKSYIILKKDKLYVKHNVLSEDIPIVILLRAMGIHTEQEMLLL 314
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEE + G+YTQ+QAL + +++K + SS + A++
Sbjct: 315 VAGVDSLYQDDFAINFEESIKLGIYTQQQALDWIGARIK--INRKQSSYRRTHIQEAVEA 372
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +S+I V NFR K +Y A M RR++ A + +DD+DY+GNKRLEL+GQL++L
Sbjct: 373 IASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKRLELAGQLLAL 432
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L+K ++A +FD +V++ H + IT G+ +STGN+ ++R
Sbjct: 433 LFEDLFKKFCFDIKMNIDKVLNKRNRAEQFDAWTVMSMHSNHITQGMNRAISTGNWSLKR 492
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEGE
Sbjct: 493 FRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPADTPEGE 552
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT++EE P+ +L + LG ED+ L G++L+ P S+ + NG +
Sbjct: 553 ACGLVKNLALMTHITTNDEEGPIKNLVFMLGAEDIMALGGKQLYIPGSYTISINGTPIAL 612
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRP+ F+ A R+LRR G+I EFVS+Y+N Q V++A+D GR+CRPL++ +NG S +K+
Sbjct: 613 TRRPKYFLNAFRRLRRMGRISEFVSIYINHHQCAVHIATDDGRICRPLIVVENGRSLVKD 672
Query: 479 YHMKELMD 486
+H+++L D
Sbjct: 673 HHLEKLRD 680
>L1JY82_GUITH (tr|L1JY82) DNA-directed RNA polymerase OS=Guillardia theta
CCMP2712 GN=GUITHDRAFT_64211 PE=3 SV=1
Length = 1155
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 243/485 (50%), Positives = 330/485 (68%), Gaps = 7/485 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLR CVL K E E++ +GECPLDPGGYFV++G EKVILIQEQLSKNRIII D
Sbjct: 161 MPIMLRCSHCVLNGKSETEMSAMGECPLDPGGYFVVRGTEKVILIQEQLSKNRIIIERDA 220
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+I ++ + LK N F +P+++ +KAMG+ SDQE++Q+V
Sbjct: 221 KGQPSASVTSSTAKTKTKTNITIKNGRFQLKHNSFTDSIPIVIALKAMGLTSDQEIIQLV 280
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + ++ L S E CA + QAL ++ +K+K + F+ ++ + A + L
Sbjct: 281 GSEALFADDLAASLEVCATE---IRPQALDYIGNKIKPTKFAR--RQQSTKAEEAREKLA 335
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
+S++PV + +FR K IY +M+RRI+ A+ ++ MDDKDY GNKRLEL+GQ +SLLF
Sbjct: 336 TVVVSHVPVVKYDFRAKAIYICLMLRRIIQAMHDETVMDDKDYYGNKRLELAGQTMSLLF 395
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK+ V+ + K L+KP + FD+ L + IT L + +STGN+ +RRF
Sbjct: 396 EDVFKSFNSDVQKIAQKQLEKPSRTTTFDVLKYLPPTK--ITSALVNAISTGNWNLRRFG 453
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
MER+G+TQVL RLS+I LG +TRV QFEK+RKVSGPRALQPSQWGMLCP DTPEGE+C
Sbjct: 454 MERQGVTQVLSRLSYIAALGMITRVQSQFEKTRKVSGPRALQPSQWGMLCPADTPEGESC 513
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNL+LMTHVTTD++E P+ LCY LGVED+ LSGEE + +LV NGL+LG HR
Sbjct: 514 GLVKNLSLMTHVTTDDDELPIELLCYDLGVEDLGILSGEEATLGNVYLVFLNGLLLGLHR 573
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
P+ FV +R +RR G++GEFVS+Y N +Q V+++ DGGRVCRPL+I NG S + + H
Sbjct: 574 APKNFVQLLRAMRRRGRLGEFVSIYSNARQRTVHISCDGGRVCRPLIIVKNGRSFVTDQH 633
Query: 481 MKELM 485
+KE++
Sbjct: 634 IKEVL 638
>B6KDI3_TOXGO (tr|B6KDI3) DNA-directed RNA polymerase OS=Toxoplasma gondii
GN=TGME49_072740 PE=3 SV=1
Length = 1332
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/522 (47%), Positives = 338/522 (64%), Gaps = 39/522 (7%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+PVMLRS CVL+ KD L +LGECP DPGGYF++KG EKV+L+QEQLSKNRII+ D
Sbjct: 274 IPVMLRSRVCVLHGKDPQTLQRLGECPFDPGGYFIVKGTEKVLLMQEQLSKNRIIVETDM 333
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
N+ +V++ K++L+ N F +P +V++AMG E+DQE++QM+
Sbjct: 334 KHNVCATVTSATAESKSRTAVVLKNNKLYLRHNSFLDDLPACIVLRAMGTETDQEIMQMI 393
Query: 121 GRDPRYSLL--------LLPSFEECAQNGVYTQEQALAHLDSKVKRSM-----FSNIS-- 165
G + + + S ++C V TQ+QAL + S+++ M F+ ++
Sbjct: 394 GAGGALADVTGNTAQEAVSLSLQDCHTENVLTQQQALLWVGSRIRPKMQAKGFFTPVARG 453
Query: 166 ---SEKEGRGSPALKVLEEEF-------LSNIPVHQGNFRLKCIYAAVMMRRIMDAILNK 215
SE+ G G A V++E LS+I +FR K + +M+RR++DA +
Sbjct: 454 ALLSERGGAGRSAKSVVDEAVDVLHRVVLSHIETTGSDFRAKTRFLCLMIRRVLDAASDP 513
Query: 216 DAMDDKDYVGNKRLELSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLA 275
MDDKDY GNKRLEL+GQL+SLLFED FK V+ +D L + +A R + +
Sbjct: 514 SLMDDKDYYGNKRLELAGQLLSLLFEDLFKRFCTHVKKQADYALSRYHQA-RGGAGGLGS 572
Query: 276 RHQ-------------DLITHGLESTLSTGNFEIRRFRMERKGMTQVLQRLSFIGFLGQM 322
R D+IT G+++ LSTGN+ I+RFRMER G++QVL RLS+I LG M
Sbjct: 573 RKDEVPYPDCFRNLPTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLGMM 632
Query: 323 TRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLI 382
TR++ QFEK RKVSGPRALQPSQWGMLCPCDTPEGE+CGLVKNLAL+THVTTDE+ P+
Sbjct: 633 TRINSQFEKGRKVSGPRALQPSQWGMLCPCDTPEGESCGLVKNLALVTHVTTDEDPTPIS 692
Query: 383 SLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFV 442
SL + LGVED + +SGEELH ++LV+ NG +LG HRRPR + +R LRR G++GEFV
Sbjct: 693 SLAFCLGVEDADAISGEELHDRGTYLVMLNGALLGVHRRPRQLMKNIRLLRRHGEVGEFV 752
Query: 443 SVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYHMKEL 484
SV+VNE VY+ASDGGR+CRPL++ D+G R+ HM +L
Sbjct: 753 SVHVNEAHKTVYIASDGGRLCRPLIVVDSGRPRLLPTHMAQL 794
>B9Q403_TOXGO (tr|B9Q403) DNA-directed RNA polymerase OS=Toxoplasma gondii
GN=TGVEG_020270 PE=3 SV=1
Length = 1324
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/522 (47%), Positives = 338/522 (64%), Gaps = 39/522 (7%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+PVMLRS CVL+ KD L +LGECP DPGGYF++KG EKV+L+QEQLSKNRII+ D
Sbjct: 266 IPVMLRSRVCVLHGKDPQTLQRLGECPFDPGGYFIVKGTEKVLLMQEQLSKNRIIVETDM 325
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
N+ +V++ K++L+ N F +P +V++AMG E+DQE++QM+
Sbjct: 326 KHNVCATVTSATAESKSRTAVVLKNNKLYLRHNSFLDDLPACIVLRAMGTETDQEIMQMI 385
Query: 121 GRDPRYSLL--------LLPSFEECAQNGVYTQEQALAHLDSKVKRSM-----FSNIS-- 165
G + + + S ++C V TQ+QAL + S+++ M F+ ++
Sbjct: 386 GAGGALADVTGNTAQEAVSLSLQDCHTENVLTQQQALLWVGSRIRPKMQAKGFFTPVARG 445
Query: 166 ---SEKEGRGSPALKVLEEEF-------LSNIPVHQGNFRLKCIYAAVMMRRIMDAILNK 215
SE+ G G A V++E LS+I +FR K + +M+RR++DA +
Sbjct: 446 ALLSERGGAGRSAKSVVDEAVDVLHRVVLSHIETTGSDFRAKTRFLCLMIRRVLDAASDP 505
Query: 216 DAMDDKDYVGNKRLELSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLA 275
MDDKDY GNKRLEL+GQL+SLLFED FK V+ +D L + +A R + +
Sbjct: 506 SLMDDKDYYGNKRLELAGQLLSLLFEDLFKRFCTHVKKQADYALSRYHQA-RGGAGGLGS 564
Query: 276 RHQ-------------DLITHGLESTLSTGNFEIRRFRMERKGMTQVLQRLSFIGFLGQM 322
R D+IT G+++ LSTGN+ I+RFRMER G++QVL RLS+I LG M
Sbjct: 565 RKDEVPYPDCFRNLPTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLGMM 624
Query: 323 TRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLI 382
TR++ QFEK RKVSGPRALQPSQWGMLCPCDTPEGE+CGLVKNLAL+THVTTDE+ P+
Sbjct: 625 TRINSQFEKGRKVSGPRALQPSQWGMLCPCDTPEGESCGLVKNLALVTHVTTDEDPTPIS 684
Query: 383 SLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFV 442
SL + LGVED + +SGEELH ++LV+ NG +LG HRRPR + +R LRR G++GEFV
Sbjct: 685 SLAFCLGVEDADAISGEELHDRGTYLVMLNGALLGVHRRPRQLMKNIRLLRRHGEVGEFV 744
Query: 443 SVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYHMKEL 484
SV+VNE VY+ASDGGR+CRPL++ D+G R+ HM +L
Sbjct: 745 SVHVNEAHKTVYIASDGGRLCRPLIVVDSGRPRLLPTHMAQL 786
>B9PFT5_TOXGO (tr|B9PFT5) DNA-directed RNA polymerase OS=Toxoplasma gondii
GN=TGGT1_112030 PE=3 SV=1
Length = 1328
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/522 (47%), Positives = 338/522 (64%), Gaps = 39/522 (7%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+PVMLRS CVL+ KD L +LGECP DPGGYF++KG EKV+L+QEQLSKNRII+ D
Sbjct: 270 IPVMLRSRVCVLHGKDPQTLQRLGECPFDPGGYFIVKGTEKVLLMQEQLSKNRIIVETDM 329
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
N+ +V++ K++L+ N F +P +V++AMG E+DQE++QM+
Sbjct: 330 KHNVCATVTSATAESKSRTAVVLKNNKLYLRHNSFLDDLPACIVLRAMGTETDQEIMQMI 389
Query: 121 GRDPRYSLL--------LLPSFEECAQNGVYTQEQALAHLDSKVKRSM-----FSNIS-- 165
G + + + S ++C V TQ+QAL + S+++ M F+ ++
Sbjct: 390 GAGGALADVTGNTAQEAVSLSLQDCHTENVLTQQQALLWVGSRIRPKMQAKGFFTPVARG 449
Query: 166 ---SEKEGRGSPALKVLEEEF-------LSNIPVHQGNFRLKCIYAAVMMRRIMDAILNK 215
SE+ G G A V++E LS+I +FR K + +M+RR++DA +
Sbjct: 450 ALLSERGGAGRSAKSVVDEAVDVLHRVVLSHIETTGSDFRAKTRFLCLMIRRVLDAASDP 509
Query: 216 DAMDDKDYVGNKRLELSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLA 275
MDDKDY GNKRLEL+GQL+SLLFED FK V+ +D L + +A R + +
Sbjct: 510 SLMDDKDYYGNKRLELAGQLLSLLFEDLFKRFCTHVKKQADYALSRYHQA-RGGAGGLGS 568
Query: 276 RHQ-------------DLITHGLESTLSTGNFEIRRFRMERKGMTQVLQRLSFIGFLGQM 322
R D+IT G+++ LSTGN+ I+RFRMER G++QVL RLS+I LG M
Sbjct: 569 RKDEVPYPDCFRNLPTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLGMM 628
Query: 323 TRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLI 382
TR++ QFEK RKVSGPRALQPSQWGMLCPCDTPEGE+CGLVKNLAL+THVTTDE+ P+
Sbjct: 629 TRINSQFEKGRKVSGPRALQPSQWGMLCPCDTPEGESCGLVKNLALVTHVTTDEDPTPIS 688
Query: 383 SLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFV 442
SL + LGVED + +SGEELH ++LV+ NG +LG HRRPR + +R LRR G++GEFV
Sbjct: 689 SLAFCLGVEDADAISGEELHDRGTYLVMLNGALLGVHRRPRQLMKNIRLLRRHGEVGEFV 748
Query: 443 SVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYHMKEL 484
SV+VNE VY+ASDGGR+CRPL++ D+G R+ HM +L
Sbjct: 749 SVHVNEAHKTVYIASDGGRLCRPLIVVDSGRPRLLPTHMAQL 790
>H3D3L4_TETNG (tr|H3D3L4) DNA-directed RNA polymerase OS=Tetraodon nigroviridis
GN=POLR3B (1 of 2) PE=3 SV=1
Length = 1132
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/484 (50%), Positives = 327/484 (67%), Gaps = 6/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K E AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPMEFAKLNECPLDPGGYFIVKGQEKVILIQEQLSKNRIIVDQDR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++++++ + +L+ N ++ P+ ++ K MG+ESDQE+VQM+
Sbjct: 196 KGAVGASVTSSTHEKKSRTNMIVKQGRFYLRHNTLSEDAPIAIIFKGMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL +L +KV+R K+ + A ++L
Sbjct: 256 GTEENVMASFAPSLEECQKAQIFTQTQALRYLGNKVRRQRM--WGGPKKTKMEEARELLA 313
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQ+ LL
Sbjct: 314 SLILTHVPVKEFNFRAKCIYLAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQVSLLLC 372
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 373 EDLFKKFNSELKKIADQIIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 429
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLSFI LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 430 MDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 489
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P+I L + LGVED+ L GEEL P FLV NG ILG R
Sbjct: 490 GLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFLVFLNGNILGVIR 549
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I G +K H
Sbjct: 550 DHQKLVGTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKGQPMVKNKH 609
Query: 481 MKEL 484
M++L
Sbjct: 610 MEDL 613
>E1ZPD8_CHLVA (tr|E1ZPD8) DNA-directed RNA polymerase OS=Chlorella variabilis
GN=CHLNCDRAFT_56318 PE=3 SV=1
Length = 1155
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 256/499 (51%), Positives = 337/499 (67%), Gaps = 19/499 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIII---- 56
MP+MLRS RCVL K E ELA +GECPLDPGGYFV+KG EKVILIQEQLSKNRIII
Sbjct: 129 MPIMLRSDRCVLTGKSEEELAWVGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDTGT 188
Query: 57 ----VMDKNRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMES 112
+ + +IV + ++ LK N F + V +++VM+AMG+ES
Sbjct: 189 PALAARHSHGAVVASVTSSTHERKSKTNIVSKHNRLMLKHNAFTEDVNIVIVMRAMGVES 248
Query: 113 DQEVVQMVGRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSM-------FSNIS 165
D+EV+Q+VG + ++ LL P+ + C + GVYT++QAL +L KVK S +
Sbjct: 249 DEEVLQLVGTEGPFASLLTPTLQHCKEEGVYTRQQALDYLAGKVKGSGRPASPAGGGGFT 308
Query: 166 SEKEGRGSPALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVG 225
R A +L L ++PV Q +++ K Y AVM+RR++ A L+ +DD+DY G
Sbjct: 309 RRTRSRVDEARDILANVVLCHVPVVQFDYQQKVTYIAVMVRRMLYAKLDPSFIDDRDYYG 368
Query: 226 NKRLELSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGL 285
NKRLEL+G L++LLFED FK M ++ +D L K ++A +FDI+ + D IT GL
Sbjct: 369 NKRLELAGGLLALLFEDLFKRMNADLKRQADSSLSKANRATQFDIAKCI--RTDTITFGL 426
Query: 286 ESTLSTGNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQ 345
E +S+GN+ I+RFRMERKG+TQVL RLSFI +G MTR++ QFEK+RKVSGPRALQPSQ
Sbjct: 427 EHAISSGNWTIKRFRMERKGVTQVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQ 486
Query: 346 WGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPD 405
WGMLCP DTPEGE+CGLVKNLALMTHVTTDEEEAP+ L + +GVE ++ EL
Sbjct: 487 WGMLCPADTPEGESCGLVKNLALMTHVTTDEEEAPIARLAHIMGVEPASLVNQSELRERG 546
Query: 406 SFLVIFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRP 465
LV NG ILG HRRP+ FV + R++RR G++GEFVSVY+ + V +ASDGGRVCRP
Sbjct: 547 CALVFLNGNILGVHRRPKYFVRSFREMRRRGRVGEFVSVYM--QHDTVQIASDGGRVCRP 604
Query: 466 LVIADNGISRIKEYHMKEL 484
L+I D G+ R+K+ H++ L
Sbjct: 605 LIICDRGVPRVKDEHLQLL 623
>C1GLZ2_PARBD (tr|C1GLZ2) DNA-directed RNA polymerase OS=Paracoccidioides
brasiliensis (strain Pb18) GN=PADG_08383 PE=3 SV=1
Length = 1209
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/487 (47%), Positives = 335/487 (68%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K EAE+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 238 MPVMLRSSKCVLSNKSEAEMQLLQECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDL 297
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+++KE+++++ N + VP+++++KAMG++SD+E++ +
Sbjct: 298 KKEIVQASVTSSSNERKSKSYIILKKERIYVRHNVLNEDVPIVILLKAMGIQSDKEMLLL 357
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK-RSMFSNISSEKEGRGSPALK 177
V G D Y +FEE + G+YTQ QAL ++ S++K +N + A++
Sbjct: 358 VAGIDSTYQEDFAINFEEAVKLGIYTQHQALEYIGSRIKINRKPNNFGVIRRNYVQEAIE 417
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y A M RR++ A + +DD+DYVGNKRLEL+GQL+S
Sbjct: 418 AISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKRLELAGQLLS 477
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + +FD V+A H + IT G+ +STGN+ ++
Sbjct: 478 LLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRAISTGNWSLK 537
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEG
Sbjct: 538 RFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPSDTPEG 597
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G ELH +++V NG +
Sbjct: 598 EACGLVKNLALMTHITTNDEEEPVRKLIFALGAEDVQTVGGRELHGQGAYIVFLNGSPIA 657
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ + R+LRR G++ EF+SV++N Q V++A+D GR+CRPL+I ++G S+++
Sbjct: 658 LTRRPKFFLHSFRRLRRTGRVSEFISVFINHHQRAVHIATDDGRICRPLIIVEDGKSKVQ 717
Query: 478 EYHMKEL 484
+H++ L
Sbjct: 718 AHHLRAL 724
>Q0CN89_ASPTN (tr|Q0CN89) DNA-directed RNA polymerase OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=ATEG_04845 PE=3 SV=1
Length = 1219
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/486 (48%), Positives = 335/486 (68%), Gaps = 4/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K AE+ L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D
Sbjct: 213 MPVMLRSSKCVLANKSPAEMTVLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVETDP 272
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I IV++K+K+++K N + +P+++++KAMG+ +D+E++ +
Sbjct: 273 KKEIVQASVTSSSNERKSKSYIVLKKDKLYVKHNVLNEDIPIVILLKAMGINTDKEMLLL 332
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEE G+YTQ+QAL + +++K + +S + A++
Sbjct: 333 VAGVDKVYQEDFAINFEEAINLGIYTQQQALDWIGARIK--INRKQASYRRTHVQEAIEA 390
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +S+I V NFR K IY A M RR++ A + +DD+DY+GNKRLEL+GQL++L
Sbjct: 391 IASVIISHIEVKNMNFRPKAIYVAHMARRVLMAKNDPTLVDDRDYLGNKRLELAGQLLAL 450
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L+K ++A FD SV++ H + IT G+ +STGN+ ++R
Sbjct: 451 LFEDLFKKFCFDIKMNVDKVLNKRNRAEAFDAWSVMSMHTNHITQGMNRAISTGNWSLKR 510
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEGE
Sbjct: 511 FRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPADTPEGE 570
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT++EE P+ +L + LG ED++ L G+EL+ P + + NG
Sbjct: 571 ACGLVKNLALMTHITTNDEEGPIRNLIFMLGAEDIQTLGGKELYGPGCYTISINGTPTAL 630
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRP+ F+ A R+LRR G+I EFVS+Y+N Q V++A+D GR+CRPL++ +NG S ++
Sbjct: 631 TRRPKYFLNAFRRLRRMGRISEFVSIYINHHQHAVHVATDDGRICRPLIVVENGKSTVQT 690
Query: 479 YHMKEL 484
+H+++L
Sbjct: 691 HHLEKL 696
>C0SI08_PARBP (tr|C0SI08) DNA-directed RNA polymerase OS=Paracoccidioides
brasiliensis (strain Pb03) GN=PABG_07313 PE=3 SV=1
Length = 1232
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/487 (47%), Positives = 335/487 (68%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K EAE+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 238 MPVMLRSSKCVLSNKSEAEMQLLQECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDL 297
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+++KE+++++ N + VP+++++KAMG++SD+E++ +
Sbjct: 298 KKEIVQASVTSSSNERKSKSYIILKKERIYVRHNVLNEDVPIVILLKAMGIQSDKEMLLL 357
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK-RSMFSNISSEKEGRGSPALK 177
V G D Y +FEE + G+YTQ QAL ++ S++K +N + A++
Sbjct: 358 VAGIDSTYQEDFAINFEEAVKLGIYTQHQALEYIGSRIKINRKPNNFGVIRRNYVQEAIE 417
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y A M RR++ A + +DD+DYVGNKRLEL+GQL+S
Sbjct: 418 AISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKRLELAGQLLS 477
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + +FD V+A H + IT G+ +STGN+ ++
Sbjct: 478 LLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRAISTGNWSLK 537
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEG
Sbjct: 538 RFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPSDTPEG 597
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G ELH +++V NG +
Sbjct: 598 EACGLVKNLALMTHITTNDEEEPVRKLIFALGAEDVQTVGGRELHGQGAYIVFLNGSPIA 657
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ + R+LRR G++ EF+SV++N Q V++A+D GR+CRPL+I ++G S+++
Sbjct: 658 LTRRPKFFLHSFRRLRRTGRVSEFISVFINHHQRAVHIATDDGRICRPLIIVEDGKSKVQ 717
Query: 478 EYHMKEL 484
+H++ L
Sbjct: 718 AHHLRAL 724
>C1HBD0_PARBA (tr|C1HBD0) DNA-directed RNA polymerase OS=Paracoccidioides
brasiliensis (strain ATCC MYA-826 / Pb01) GN=PAAG_08071
PE=3 SV=1
Length = 1205
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/487 (47%), Positives = 334/487 (68%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K EAE+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 196 MPVMLRSSKCVLSNKSEAEMQLLQECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDL 255
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+++KE+++++ N + VP+++++KAMG++SD+E++ +
Sbjct: 256 KKEIVQASVTSSSNERKSKSYIILKKERIYVRHNVLNEDVPIVILLKAMGIQSDKEMLLL 315
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK-RSMFSNISSEKEGRGSPALK 177
V G D Y +FEE + G+YTQ QAL ++ S++K +N + A++
Sbjct: 316 VAGIDSTYQEDFAINFEEAVKLGIYTQHQALEYIGSRIKINRKPNNFGVIRRNYVQEAIE 375
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y A M RR++ A + +DD+DYVGNKRLEL+GQL+S
Sbjct: 376 AISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKRLELAGQLLS 435
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + +FD V+A H + IT G+ +STGN+ ++
Sbjct: 436 LLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRAISTGNWSLK 495
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEG
Sbjct: 496 RFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPSDTPEG 555
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G ELH +++V NG +
Sbjct: 556 EACGLVKNLALMTHITTNDEEEPVRKLIFALGAEDVQTVGGRELHGQGTYIVFLNGSPIA 615
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ + R+LRR G++ EF+SV++N Q V++A+D GR+CRPL+I ++G SR++
Sbjct: 616 LTRRPKFFLHSFRRLRRTGRVSEFISVFINHHQRAVHIATDDGRICRPLIIVEDGKSRVQ 675
Query: 478 EYHMKEL 484
H++ L
Sbjct: 676 ARHLRAL 682
>M7BNZ6_CHEMY (tr|M7BNZ6) DNA-directed RNA polymerase III subunit RPC2 OS=Chelonia
mydas GN=UY3_12992 PE=4 SV=1
Length = 1663
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/488 (49%), Positives = 330/488 (67%), Gaps = 10/488 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 556 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 615
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++++++ + +L+ N ++ +P+ ++ KAMG+ESDQE+VQM+
Sbjct: 616 KGTVGASVTSSTHEKKSRTNMIVKQGRFYLRHNTLSEDIPIAIIFKAMGVESDQEIVQMI 675
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 676 GTEEHVMAAFAPSLEECQKAQIFTQMQALKYIGNKVRRQRM--WGGPKKTKMEEARELLA 733
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV + +FR KCIY AVM+RR++ A ++ +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 734 STILTHVPVKEFHFRAKCIYTAVMVRRVILA-QGENKVDDRDYYGNKRLELAGQLLSLLF 792
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNF----EI 296
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +ST F +
Sbjct: 793 EDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTHTFFLCSVV 849
Query: 297 RRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 356
+RF+M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPE
Sbjct: 850 KRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPE 909
Query: 357 GEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLIL 416
GEACGLVKNLALMTH+TTD E+ P+I L LGVED+ L GEEL P+ FLV NG IL
Sbjct: 910 GEACGLVKNLALMTHITTDMEDGPIIKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNIL 969
Query: 417 GKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRI 476
G R V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I +
Sbjct: 970 GVIRDHPKLVHTFRLMRRAGYINEFVSISTNLADRCVYISSDGGRLCRPYIIVKKQKPAV 1029
Query: 477 KEYHMKEL 484
+ HM+EL
Sbjct: 1030 TDKHMEEL 1037
>A2Q8V9_ASPNC (tr|A2Q8V9) DNA-directed RNA polymerase OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=An01g05740 PE=3 SV=1
Length = 1225
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/486 (47%), Positives = 335/486 (68%), Gaps = 3/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K AE+ L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D
Sbjct: 218 MPVMLRSSKCVLANKTPAEMTVLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVETDP 277
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I IV++K+K+++K N ++ +P+++++KAMG+ +D+E++ +
Sbjct: 278 KKEIVQASVTSSSNERKSKSYIVLKKDKLYVKHNVLSEDIPIVILLKAMGIHTDKEMLLL 337
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEE + G+YTQ+QAL + +++K + + S + A++
Sbjct: 338 VAGVDKVYQEDFAINFEEAIKLGIYTQQQALDWIGARIKINRKQS-PSYRRTHVQEAVEA 396
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +S+I V NFR K +Y A M RR++ A + +DD+DY+GNKRLEL+GQL++L
Sbjct: 397 IASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDASLVDDRDYLGNKRLELAGQLLAL 456
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L+K ++A FD SV+ H + IT G+ +STGN+ ++R
Sbjct: 457 LFEDLFKKFCFDIKMNIDKVLNKRNRAEAFDAYSVITMHSNHITQGMNRAISTGNWSLKR 516
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEGE
Sbjct: 517 FRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPADTPEGE 576
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT++EE P+ +L + LG ED++ + G+EL+ P + + NG
Sbjct: 577 ACGLVKNLALMTHITTNDEEGPVRNLIFMLGAEDIQTVGGKELYGPGCYTISINGTPTAL 636
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRP+ F+ A R+LRR G+I EFVS+Y+N Q V++A+D GR+CRPL++ +NG SR+
Sbjct: 637 TRRPKYFLDAFRRLRRMGRISEFVSIYINHHQRAVHVATDDGRICRPLIVVENGKSRVNA 696
Query: 479 YHMKEL 484
H+++L
Sbjct: 697 QHLEKL 702
>G7X993_ASPKW (tr|G7X993) DNA-directed RNA polymerase OS=Aspergillus kawachii
(strain NBRC 4308) GN=AKAW_01624 PE=3 SV=1
Length = 1233
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/486 (47%), Positives = 335/486 (68%), Gaps = 3/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K AE+ L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D
Sbjct: 226 MPVMLRSSKCVLANKTPAEMTVLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVETDP 285
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I IV++K+K+++K N ++ +P+++++KAMG+ +D+E++ +
Sbjct: 286 KKEIVQASVTSSSNERKSKSYIVLKKDKLYVKHNVLSEDIPIVILLKAMGIHTDKEMLLL 345
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEE + G+YTQ+QAL + +++K + + S + A++
Sbjct: 346 VAGVDKVYQEDFAINFEEAIKLGIYTQQQALDWIGARIKINRKQS-PSYRRTHVQEAVEA 404
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +S+I V NFR K +Y A M RR++ A + +DD+DY+GNKRLEL+GQL++L
Sbjct: 405 IASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDASLVDDRDYLGNKRLELAGQLLAL 464
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L+K ++A FD SV+ H + IT G+ +STGN+ ++R
Sbjct: 465 LFEDLFKKFCFDIKMNIDKVLNKRNRAEAFDAYSVITMHSNHITQGMNRAISTGNWSLKR 524
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEGE
Sbjct: 525 FRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPADTPEGE 584
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT++EE P+ +L + LG ED++ + G+EL+ P + + NG
Sbjct: 585 ACGLVKNLALMTHITTNDEEGPIRNLIFMLGAEDIQTVGGKELYGPGCYTISINGTPTAL 644
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRP+ F+ A R+LRR G+I EFVS+Y+N Q V++A+D GR+CRPL++ +NG SR+
Sbjct: 645 TRRPKYFLDAFRRLRRMGRISEFVSIYINHHQRAVHVATDDGRICRPLIVVENGKSRVNA 704
Query: 479 YHMKEL 484
H+++L
Sbjct: 705 QHLEKL 710
>K9HCW9_AGABB (tr|K9HCW9) DNA-directed RNA polymerase OS=Agaricus bisporus var.
bisporus (strain H97 / ATCC MYA-4626 / FGSC 10389)
GN=AGABI2DRAFT_188003 PE=3 SV=1
Length = 1142
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/489 (46%), Positives = 334/489 (68%), Gaps = 5/489 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +CVL + EA+LA++ ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ D
Sbjct: 142 LPIMLRSNKCVLTGRTEAQLARMSECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVETDN 201
Query: 61 NRNIXXXXXXXXXXXXXXXD--IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQ 118
+ + + +K +++L+ N + +P+++ +KA+G++SD+E++
Sbjct: 202 VKGVVQASCTSSTHGGLKSKTYVATKKGRIYLRHNSIHEDLPIVIALKALGVQSDKEILL 261
Query: 119 MV-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALK 177
+ G Y + + E+ A+ G++T++QAL ++ ++VK + + + AL+
Sbjct: 262 LTAGNTEAYKIAFSANLEDAAKLGIFTRQQALEYIGTRVK--VNRRVVGPRRPAWEEALE 319
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
L L+++PV+ + R K I+ A M RR++ A+ +++ +DD+DYVGNKRLEL+GQL++
Sbjct: 320 ALATIVLAHVPVNGLDLRPKAIFVATMTRRVLMAMNDENMVDDRDYVGNKRLELAGQLLA 379
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FKT ++++ DK+L KP + FD + + D +T G +STGN+ ++
Sbjct: 380 LLFEDLFKTYNSNLKSAIDKVLKKPSRTTEFDAYNTMQFQGDHLTAGFVRAISTGNWSLK 439
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RF+MER G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWG+LCP DTPEG
Sbjct: 440 RFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGPRALQPSQWGVLCPSDTPEG 499
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TTD EE P+I L + LGVED+ +G E++ P++F+V NG I+G
Sbjct: 500 EACGLVKNLALMTHITTDVEEEPIIQLAFMLGVEDIRLATGTEIYGPNTFVVNVNGTIIG 559
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
R P FV+ RKLRRA + EFVS+YVN V++ASDGGR+CRP++I ++G S++
Sbjct: 560 LTRHPMRFVSQFRKLRRARRFSEFVSIYVNHHHRTVHIASDGGRICRPMIIVEHGRSKVT 619
Query: 478 EYHMKELMD 486
H L D
Sbjct: 620 PEHATHLKD 628
>I8A634_ASPO3 (tr|I8A634) DNA-directed RNA polymerase OS=Aspergillus oryzae
(strain 3.042) GN=Ao3042_03448 PE=3 SV=1
Length = 1008
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/486 (47%), Positives = 338/486 (69%), Gaps = 3/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL +K AE+ L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D
Sbjct: 1 MPVMLRSSKCVLSDKTPAEMTVLDECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVETDP 60
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I IV++K+K+++K N ++ +P+++++KAMG+ +D+E++ +
Sbjct: 61 KKEIVQASVTSSSNERKSKSYIVLKKDKLYVKHNVLSEDIPIVILLKAMGIHTDKEMLLL 120
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEE + G+YTQ+QAL + S++K + ++ + A++
Sbjct: 121 VAGIDKVYQEDFAINFEEAIKLGIYTQQQALDWIGSRIKINRGKQ-NNYRRTHVQEAVEA 179
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +S+I V NFR K +Y A M RR++ A + +DD+DY+GNKRLEL+GQL++L
Sbjct: 180 IASVIISHIEVKDMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKRLELAGQLLAL 239
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L+K ++A FD +V++ H + IT G+ +STGN+ ++R
Sbjct: 240 LFEDLFKKFCFDIKMNVDKVLNKRNRAEAFDAWTVMSMHSNHITQGMNRAISTGNWSLKR 299
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 300 FRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCLADTPEGE 359
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT++EE P+ +L + LG ED+ L G+EL+ P + + NG +
Sbjct: 360 ACGLVKNLALMTHITTNDEEGPIRNLIFMLGAEDISTLGGKELYGPGCYTISINGTPMAL 419
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRP+ F+ A R+LRR G+I EFVS+Y+N Q V++A+D GR+CRPL++ +NG +R++
Sbjct: 420 TRRPKSFLNAFRRLRRMGRISEFVSIYINHHQRAVHVATDDGRICRPLIVVENGKNRVRS 479
Query: 479 YHMKEL 484
+H+K+L
Sbjct: 480 HHLKKL 485
>B8MYG2_ASPFN (tr|B8MYG2) DNA-directed RNA polymerase OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=AFLA_081000 PE=3 SV=1
Length = 1218
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/486 (47%), Positives = 338/486 (69%), Gaps = 3/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL +K AE+ L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D
Sbjct: 211 MPVMLRSSKCVLSDKTPAEMTVLDECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVETDP 270
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I IV++K+K+++K N ++ +P+++++KAMG+ +D+E++ +
Sbjct: 271 KKEIVQASVTSSSNERKSKSYIVLKKDKLYVKHNVLSEDIPIVILLKAMGIHTDKEMLLL 330
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEE + G+YTQ+QAL + S++K + ++ + A++
Sbjct: 331 VAGIDKVYQEDFAINFEEAIKLGIYTQQQALDWIGSRIKINRGKQ-NNYRRTHVQEAVEA 389
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +S+I V NFR K +Y A M RR++ A + +DD+DY+GNKRLEL+GQL++L
Sbjct: 390 IASVIISHIEVKDMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKRLELAGQLLAL 449
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L+K ++A FD +V++ H + IT G+ +STGN+ ++R
Sbjct: 450 LFEDLFKKFCFDIKMNVDKVLNKRNRAEAFDAWTVMSMHSNHITQGMNRAISTGNWSLKR 509
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 510 FRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCLADTPEGE 569
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT++EE P+ +L + LG ED+ L G+EL+ P + + NG +
Sbjct: 570 ACGLVKNLALMTHITTNDEEGPIRNLIFMLGAEDISTLGGKELYGPGCYTISINGTPMAL 629
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRP+ F+ A R+LRR G+I EFVS+Y+N Q V++A+D GR+CRPL++ +NG +R++
Sbjct: 630 TRRPKSFLNAFRRLRRMGRISEFVSIYINHHQRAVHVATDDGRICRPLIVVENGKNRVRS 689
Query: 479 YHMKEL 484
+H+K+L
Sbjct: 690 HHLKKL 695
>A9V2W9_MONBE (tr|A9V2W9) DNA-directed RNA polymerase OS=Monosiga brevicollis
GN=26625 PE=3 SV=1
Length = 1097
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/486 (49%), Positives = 334/486 (68%), Gaps = 12/486 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL A+ AK GECP DPGGYFV+ G EKVILIQEQLSKNRII+ K
Sbjct: 120 MPIMLRSNLCVLNGASHAKQAKYGECPHDPGGYFVVSGTEKVILIQEQLSKNRIIVEEFK 179
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
++ I+ + ++ ++ +N ++ VPL+VV+KAMG+ SDQE++Q++
Sbjct: 180 G-DLTASVTSSSADRKTKTTIIFKNDQFYMLVNTLSEAVPLVVVLKAMGVISDQEIMQLI 238
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK--RSMFSNISSEKEGRGSPALKV 178
G + L+L PS E CA ++TQ QALA+L SK+K R+ + E GR +
Sbjct: 239 GAEEEAMLVLGPSVERCANLNIFTQNQALAYLGSKIKLLRTYGGARTKEDMGR-----DL 293
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
L L+++P +FR K ++ ++M+RR++ ++ +K DD+DY+GNKRLEL+G L+SL
Sbjct: 294 LSSVVLAHVPCENFDFRAKAVFLSLMVRRVIISMGDK-MTDDRDYLGNKRLELAGSLMSL 352
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK Q++ +D L K ++ FD ++ + +D+IT+ L + +S+GN+ ++R
Sbjct: 353 LFEDTFKNFNAQLKRQADVNLSK-NRVAAFDATNFM--REDIITNSLRNAISSGNWILKR 409
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLSFI LG MTR++ QFEK+RKVSGPR+LQPSQWGMLCP DTPEGE
Sbjct: 410 FKMERHGVTSVLSRLSFIASLGMMTRITSQFEKTRKVSGPRSLQPSQWGMLCPADTPEGE 469
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTHVT D+EE PL+ L Y LGVE + ++GEE +FLV NGL+LG
Sbjct: 470 ACGLVKNLALMTHVTNDDEEEPLVKLAYNLGVESLHLINGEEFGRSSTFLVFINGLMLGV 529
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRPR V R LRR+G+I FVS+ +N+K CVY+ASD GR CRP +I +NG S+++
Sbjct: 530 TRRPRIMVRNFRLLRRSGRISPFVSISLNKKHRCVYIASDAGRTCRPYIIVENGKSKVRP 589
Query: 479 YHMKEL 484
+H++EL
Sbjct: 590 HHLEEL 595
>A3LP81_PICST (tr|A3LP81) DNA-directed RNA polymerase OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=RET1 PE=3 SV=1
Length = 1155
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/489 (49%), Positives = 330/489 (67%), Gaps = 10/489 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +C+L ++ ++AK ECPLDPGGYFV+ G EKVIL+QEQLSKNRII+ D+
Sbjct: 151 MPVMLRSNKCILDGINDKQMAKFDECPLDPGGYFVVNGTEKVILVQEQLSKNRIIVEADE 210
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K +K++LK N ++ +P+++V+KA G+ SD E++Q+
Sbjct: 211 KKGIVQASVTSSTHERKSKTYVITKNDKIYLKHNSISEDIPIVIVLKAAGITSDLEILQL 270
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G DP+Y L + +FEE A+ V+TQ+QAL ++ +VK R+ + +S +EG
Sbjct: 271 VCGSDPQYQDLFVVNFEEAAKLEVFTQQQALNYVGKRVKTIRRAGAAKLSVLQEG----- 325
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
++ + +++I V FR K +Y A M RR++ + N +DD+DYVGNKRLEL+GQL
Sbjct: 326 IEAIATTVIAHITVADLQFREKALYIATMARRVVMTMHNPKMVDDRDYVGNKRLELAGQL 385
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
+SLLFED FK + + DK+L KP + + FD + H + IT GL +STGN+
Sbjct: 386 MSLLFEDLFKKFNSDFKANIDKILKKPSRTSEFDALLSINIHSNNITMGLNRAISTGNWS 445
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTP
Sbjct: 446 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTSDTP 505
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTD+EEAP+ LCY LG E++ + LH+ +F + NG +
Sbjct: 506 EGEACGLVKNLALMTHITTDDEEAPIRKLCYVLGCENILGIDSATLHSQGNFGIYLNGTL 565
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISR 475
+G R P FVT R+LRR GKI EFVS+Y N Q V++A+DGGR+CRPL+I N
Sbjct: 566 IGTSRFPSKFVTDFRRLRRTGKISEFVSIYTNTHQTAVHIATDGGRICRPLIIVKNNEPM 625
Query: 476 IKEYHMKEL 484
+K H+ +L
Sbjct: 626 VKAEHLLKL 634
>G3XSL0_ASPNA (tr|G3XSL0) DNA-directed RNA polymerase OS=Aspergillus niger
(strain ATCC 1015 / CBS 113.46 / FGSC A1144 / LSHB Ac4 /
NCTC 3858a / NRRL 328 / USDA 3528.7)
GN=ASPNIDRAFT_171679 PE=3 SV=1
Length = 1201
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/486 (47%), Positives = 335/486 (68%), Gaps = 3/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K AE+ L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D
Sbjct: 194 MPVMLRSSKCVLANKTPAEMTVLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVETDP 253
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I IV++K+K+++K N ++ +P+++++KAMG+ +D+E++ +
Sbjct: 254 KKEIVQASVTSSSNERKSKSYIVLKKDKLYVKHNVLSEDIPIVILLKAMGIHTDKEMLLL 313
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEE + G+YTQ+QAL + +++K + + S + A++
Sbjct: 314 VAGVDKVYQEDFAINFEEAIKLGIYTQQQALDWIGARIKINRKQS-PSYRRTHVQEAVEA 372
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +S+I V NFR K +Y A M RR++ A + +DD+DY+GNKRLEL+GQL++L
Sbjct: 373 IASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDASLVDDRDYLGNKRLELAGQLLAL 432
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L+K ++A FD SV+ H + IT G+ +STGN+ ++R
Sbjct: 433 LFEDLFKKFCFDIKMNIDKVLNKRNRAEAFDAYSVITMHSNHITQGMNRAISTGNWSLKR 492
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEGE
Sbjct: 493 FRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPADTPEGE 552
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT++EE P+ +L + LG ED++ + G+EL+ P + + NG
Sbjct: 553 ACGLVKNLALMTHITTNDEEGPVRNLIFMLGAEDIQTVGGKELYGPGCYTISINGTPTAL 612
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRP+ F+ A R+LRR G+I EFVS+Y+N Q V++A+D GR+CRPL++ +NG SR+
Sbjct: 613 TRRPKYFLDAFRRLRRMGRISEFVSIYINHHQRAVHVATDDGRICRPLIVVENGKSRVNA 672
Query: 479 YHMKEL 484
H+++L
Sbjct: 673 QHLEKL 678
>A1D510_NEOFI (tr|A1D510) DNA-directed RNA polymerase OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=NFIA_022140 PE=3 SV=1
Length = 1200
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/488 (47%), Positives = 338/488 (69%), Gaps = 4/488 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +CVL K +E+ L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D
Sbjct: 195 MPIMLRSSKCVLANKTPSEMTVLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVETDP 254
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+++K+K+++K N ++ +P++++++AMG+ ++QE++ +
Sbjct: 255 KKEIVQASVTSSSNERKSKSYIILKKDKLYVKHNVLSEDIPIVILLRAMGIHTEQEMLLL 314
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEE + G+YTQ+QAL + +++K + SS + A++
Sbjct: 315 VAGVDSLYQDDFAINFEESIKLGIYTQQQALDWIGARIK--INRKQSSYRRTHIQEAVEA 372
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +S+I V NFR K +Y A M RR++ A + +DD+DY+GNKRLEL+GQL++L
Sbjct: 373 IASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKRLELAGQLLAL 432
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L+K ++A +FD +V++ H + IT G+ +STGN+ ++R
Sbjct: 433 LFEDLFKKFCFDIKMNIDKVLNKRNRAEQFDAWTVMSMHSNHITQGMNRAISTGNWSLKR 492
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEGE
Sbjct: 493 FRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPADTPEGE 552
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT++EE P+ +L + LG ED+ L G++L+TP S+ + NG +
Sbjct: 553 ACGLVKNLALMTHITTNDEEGPIKNLVFMLGAEDIMALGGKQLYTPGSYTISINGTPIAL 612
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRP+ F+ A R+LRR G+I EFVS+Y+N Q V++A+D GR+CRPL++ +NG S +
Sbjct: 613 TRRPKYFLNAFRRLRRMGRISEFVSIYINHHQCAVHIATDDGRICRPLIVVENGRSLVTA 672
Query: 479 YHMKELMD 486
H+ +L D
Sbjct: 673 RHLDKLRD 680
>Q2URF4_ASPOR (tr|Q2URF4) DNA-directed RNA polymerase OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=AO090005000851 PE=3 SV=1
Length = 1180
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/486 (47%), Positives = 338/486 (69%), Gaps = 3/486 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL +K AE+ L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D
Sbjct: 173 MPVMLRSSKCVLSDKTPAEMTVLDECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVETDP 232
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I IV++K+K+++K N ++ +P+++++KAMG+ +D+E++ +
Sbjct: 233 KKEIVQASVTSSSNERKSKSYIVLKKDKLYVKHNVLSEDIPIVILLKAMGIHTDKEMLLL 292
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEE + G+YTQ+QAL + S++K + ++ + A++
Sbjct: 293 VAGIDKVYQEDFAINFEEAIKLGIYTQQQALDWIGSRIKINRGKQ-NNYRRTHVQEAVEA 351
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +S+I V NFR K +Y A M RR++ A + +DD+DY+GNKRLEL+GQL++L
Sbjct: 352 IASVIISHIEVKDMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKRLELAGQLLAL 411
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L+K ++A FD +V++ H + IT G+ +STGN+ ++R
Sbjct: 412 LFEDLFKKFCFDIKMNVDKVLNKRNRAEAFDAWTVMSMHSNHITQGMNRAISTGNWSLKR 471
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 472 FRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCLADTPEGE 531
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT++EE P+ +L + LG ED+ L G+EL+ P + + NG +
Sbjct: 532 ACGLVKNLALMTHITTNDEEGPIRNLIFMLGAEDISTLGGKELYGPGCYTISINGTPMAL 591
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRP+ F+ A R+LRR G+I EFVS+Y+N Q V++A+D GR+CRPL++ +NG +R++
Sbjct: 592 TRRPKSFLNAFRRLRRMGRISEFVSIYINHHQRAVHVATDDGRICRPLIVVENGKNRVRS 651
Query: 479 YHMKEL 484
+H+K+L
Sbjct: 652 HHLKKL 657
>M3WMY5_FELCA (tr|M3WMY5) DNA-directed RNA polymerase OS=Felis catus GN=POLR3B
PE=3 SV=1
Length = 1134
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/486 (49%), Positives = 331/486 (68%), Gaps = 8/486 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K AE AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ ++ +++ + +L+ N ++ +P++++ KAMG+ESDQE+VQM+
Sbjct: 196 -KGAVGASVTSSTHEKKRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMI 254
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ QAL ++ +KV+R K+ + A ++L
Sbjct: 255 GTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWG-GGPKKTKIEEARELLA 313
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQ--LISL 238
L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKRLEL+GQ L+SL
Sbjct: 314 STILTHVPVKEFNFRAKCIYTAVMVRRVILA-QGDNKVDDRDYYGNKRLELAGQENLLSL 372
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++R
Sbjct: 373 LFEDLFKKFNSEMKKIADQVIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKR 429
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGE
Sbjct: 430 FKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGE 489
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD E+ P++ L LGVED+ L GEEL P+ FLV NG ILG
Sbjct: 490 ACGLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGV 549
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R + V R +RRAG + EFVS+ N CVY++SDGGR+CRP +I +
Sbjct: 550 IRDHKKLVNTFRLMRRAGYVNEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTN 609
Query: 479 YHMKEL 484
HM+EL
Sbjct: 610 KHMEEL 615
>Q6CLR1_KLULA (tr|Q6CLR1) DNA-directed RNA polymerase OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=KLLA0F01078g PE=3 SV=1
Length = 1142
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/487 (48%), Positives = 328/487 (67%), Gaps = 9/487 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L E ++AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 148 MPIMLRSNKCILDGAAENDMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 207
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+NI V+ K +K++LK N A++VP++VV+KA G+ SD E++Q+
Sbjct: 208 KKNIVQASVTSSTHERKSKTYVVTKNDKIYLKHNSIAEEVPIVVVLKACGVVSDLEIMQL 267
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE A+ +YTQ+QAL + +KVK +S +EG ++
Sbjct: 268 VCGNDSSYQDIFAVNLEEAAELKIYTQQQALEFIGTKVKTVRRQKLSILQEG-----IEA 322
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ AI N +DD+DYVGNKRLEL+GQL+SL
Sbjct: 323 IATTVIAHLTVEALDFREKALYIAMMTRRVVMAIDNPKMVDDRDYVGNKRLELAGQLMSL 382
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + + DK+L KP++A +D + H + IT G+ +STGN+ ++R
Sbjct: 383 LFEDLFKKFNNDFKANIDKVLKKPNRAEMYDALLTINVHSNNITTGMNRAISTGNWSLKR 442
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 443 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTSDTPEGE 502
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ +CY LGVED+ + +H ++ V NG I+G
Sbjct: 503 ACGLVKNLALMTHITTDDEEEPIKRICYLLGVEDISLIDSASIHL--NYGVYLNGTIIGT 560
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FV+ R LRR G+ EF+S+Y N Q V++A+DGGR+CRPL+I NG S +
Sbjct: 561 TRFPTKFVSQFRCLRRTGRASEFISIYTNTHQKAVHIATDGGRICRPLIIVSNGQSSVTA 620
Query: 479 YHMKELM 485
H++ L+
Sbjct: 621 DHLRSLL 627
>I1FS94_AMPQE (tr|I1FS94) DNA-directed RNA polymerase OS=Amphimedon queenslandica
GN=POLR3B PE=3 SV=1
Length = 1131
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/481 (49%), Positives = 326/481 (67%), Gaps = 8/481 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS CVL K++ ELAKL ECP+DPGGYFV++G EKVILIQEQLSKNRII+ DK
Sbjct: 135 LPIMLRSANCVLSNKNQEELAKLKECPIDPGGYFVVRGTEKVILIQEQLSKNRIIVDYDK 194
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
NI +++ + + +LK N F +P+++V KAM + SDQE+VQM+
Sbjct: 195 KGNIGCSVTSSTHDRKSKTNLIFKGNQFYLKHNSFTDDIPVVLVFKAMNIISDQEIVQMI 254
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + + PS EECA VYTQ++AL + +K ++ M+ S+ E A VL
Sbjct: 255 GCEDSVLSVFAPSLEECAMLNVYTQKKALEVVGAKTRKRMYGKPRSKAE----EAHDVLS 310
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L++IPV +F++K + ++M+RR++ A KD +DD+DY GNKRLEL+G L+SLLF
Sbjct: 311 HYVLAHIPVESNDFKIKASFLSLMIRRVILATA-KDEVDDRDYYGNKRLELAGPLLSLLF 369
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ D+ L K + FD+ V +IT G+E+ LSTGN+ +RRF+
Sbjct: 370 EDLFKRYNSELKKIIDRTLAK-KRTQPFDV--VCHMKNSIITQGIETALSTGNWTLRRFK 426
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
MER G+TQVL R+SFI LG MTR++ QFEK+RK+SGPR+LQPSQWGM+CP DTPEGEAC
Sbjct: 427 MERGGVTQVLSRMSFIACLGHMTRITSQFEKTRKISGPRSLQPSQWGMVCPSDTPEGEAC 486
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLAL++H+TTD +E P+ L + LGVED+ YLSGEEL + +S+LV+ NG I+G R
Sbjct: 487 GLVKNLALISHITTDVDEGPIRRLAFNLGVEDIRYLSGEELSSNESYLVLLNGNIVGVVR 546
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
FV R LRR G++ EFVS+ N V ++SD GRVCRP +I NG+ R+ +H
Sbjct: 547 YYASFVRYFRLLRRNGRMNEFVSISTNHHNRTVSISSDSGRVCRPYIIVINGVPRVTSHH 606
Query: 481 M 481
+
Sbjct: 607 I 607
>K5XNJ2_AGABU (tr|K5XNJ2) DNA-directed RNA polymerase OS=Agaricus bisporus var.
burnettii (strain JB137-S8 / ATCC MYA-4627 / FGSC 10392)
GN=AGABI1DRAFT_122788 PE=3 SV=1
Length = 1142
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/489 (46%), Positives = 334/489 (68%), Gaps = 5/489 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +CVL + EA+LA++ ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ D
Sbjct: 142 LPIMLRSNKCVLTGRTEAQLARMSECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVETDN 201
Query: 61 NRNIXXXXXXXXXXXXXXXD--IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQ 118
+ + + +K +++L+ N + +P+++ +KA+G++SD+E++
Sbjct: 202 VKGVVQASCTSSTHGGLKSKTYVATKKGRIYLRHNSIHEDLPIVIALKALGVQSDKEILL 261
Query: 119 MV-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALK 177
+ G Y + + E+ A+ G++T++QAL ++ ++VK + + + AL+
Sbjct: 262 LTAGNTEAYKIAFSANLEDAAKLGIFTRQQALEYIGTRVKVN--RRVVGPRRPAWEEALE 319
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
L L+++PV+ + R K I+ A M RR++ A+ +++ +DD+DYVGNKRLEL+GQL++
Sbjct: 320 ALATIVLAHVPVNGLDLRPKAIFVATMTRRVLMAMNDENMVDDRDYVGNKRLELAGQLLA 379
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FKT ++++ DK+L KP + FD + + D +T G +STGN+ ++
Sbjct: 380 LLFEDLFKTYNSNLKSAIDKVLKKPSRTTEFDAYNTMQFQGDHLTAGFVRAISTGNWSLK 439
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RF+MER G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWG+LCP DTPEG
Sbjct: 440 RFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGPRALQPSQWGVLCPSDTPEG 499
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TTD EE P+I L + LGVED+ +G E++ P++F+V NG I+G
Sbjct: 500 EACGLVKNLALMTHITTDVEEEPIIQLAFMLGVEDIRLATGTEIYGPNTFVVNVNGTIIG 559
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
R P FV+ RKLRRA + EFVS+YVN V++ASDGGR+CRP++I ++G S++
Sbjct: 560 LIRHPMRFVSQFRKLRRARRFSEFVSIYVNHHHRTVHIASDGGRICRPMIIVEHGRSKVT 619
Query: 478 EYHMKELMD 486
H L D
Sbjct: 620 PEHATYLKD 628
>B8BQM2_THAPS (tr|B8BQM2) DNA-directed RNA polymerase OS=Thalassiosira pseudonana
GN=RPC2 PE=3 SV=1
Length = 1108
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/492 (50%), Positives = 333/492 (67%), Gaps = 15/492 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMD- 59
MP+MLRS +C+L +K E ELA++ ECP DPGGYFVIKG EKVILIQEQLSKNR+II D
Sbjct: 99 MPIMLRSSKCLLRDKSERELAQMKECPYDPGGYFVIKGVEKVILIQEQLSKNRVIIEEDS 158
Query: 60 KNRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
K + I ++ +++LK N A+ VP+ V MKAMG+ESD E VQ
Sbjct: 159 KTGCVSASITSSTRERKSKAYIFIKNGRLFLKHNTLAEDVPICVAMKAMGVESDLEFVQS 218
Query: 120 VGRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKV--KRSMFSN---ISSEKEGRGSP 174
VG +P L S EE ++ G+ TQ AL ++ +K+ KR F + +S E E R
Sbjct: 219 VGSEPEVIDALALSLEEPSKLGIVTQRHALKYIGNKMRAKRGAFGSTRKLSPEDEAR--- 275
Query: 175 ALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQ 234
V LS++PV +F K IY ++RR++ L K ++DDKDY GNKRLEL+G
Sbjct: 276 --DVFANVVLSHVPVVNFDFHAKTIYIGHIVRRLVMVQLGKSSLDDKDYYGNKRLELAGS 333
Query: 235 LISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNF 294
L+SLLFED FK ++ +D +L KP++A FD+ + D I +G+ S +S+GN+
Sbjct: 334 LLSLLFEDLFKHFNTDLKKQTDMVLSKPNRAQAFDVIKTI--RPDSIAYGMMSAISSGNW 391
Query: 295 EIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 354
++RFRM+R G+TQVL RLS+I LG MTRV+ QFEK+RKVSGPR+LQPSQWGMLCP DT
Sbjct: 392 VLKRFRMDRAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPADT 451
Query: 355 PEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGL 414
PEGEACGLVKNLAL+ H+TTDEE + LC GVED+ LSG E+H+ ++FLV+ NGL
Sbjct: 452 PEGEACGLVKNLALLAHITTDEESEAIERLCRDCGVEDVTLLSGHEIHSRNAFLVLLNGL 511
Query: 415 ILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIAD--NG 472
I+G H RP V ++R LRR G++GEFVS+Y+++ Q V++A+DGGRVCRPL+I D
Sbjct: 512 IVGVHTRPLWLVKSLRSLRRQGQMGEFVSLYLHDGQKAVHIATDGGRVCRPLIIVDEKTA 571
Query: 473 ISRIKEYHMKEL 484
+ R+K+ H++ L
Sbjct: 572 LPRLKQVHIEGL 583
>A7TQC8_VANPO (tr|A7TQC8) DNA-directed RNA polymerase OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=Kpol_479p15
PE=3 SV=1
Length = 1139
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/488 (48%), Positives = 328/488 (67%), Gaps = 9/488 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L D++ +AKL ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 145 MPIMLRSNKCILNGADDSMMAKLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 204
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K K++LK N A++VP+ +V+KA G+ SD E++Q+
Sbjct: 205 KKEIVQASVTSSTHERKSKTYVVTKNGKIYLKHNSIAEEVPIAIVLKACGIISDLEIMQL 264
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE A+ +YTQ QAL ++ KVK +S +EG ++
Sbjct: 265 VCGNDSSYQDIFAVNLEEAAKYNIYTQRQALEYIGGKVKTIRRQKLSILQEG-----IEA 319
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A+M RR++ A+ N +DD+DYVGNKRLEL+GQLISL
Sbjct: 320 IATTVIAHLTVEALDFREKALYVAMMARRVVMAMHNPKMVDDRDYVGNKRLELAGQLISL 379
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 380 LFEDLFKKFNSDFKASIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKR 439
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 440 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 499
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ +LC+ LGVE++ + LH ++ V NG ++G
Sbjct: 500 ACGLVKNLALMTHITTDDEEEPIKNLCFVLGVENICLVDSATLHL--NYTVHLNGTLIGT 557
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P FV+ R LRR GK+ EF+S+Y N Q V++A+DGGR+CRPL+I G S +
Sbjct: 558 IRFPARFVSQFRHLRRTGKVSEFISIYTNSHQRAVHIATDGGRICRPLIIVTAGKSHVNA 617
Query: 479 YHMKELMD 486
H+KEL++
Sbjct: 618 EHLKELLE 625
>Q5BGK9_EMENI (tr|Q5BGK9) Putative uncharacterized protein OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=AN0321.2 PE=3 SV=1
Length = 1656
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/488 (47%), Positives = 338/488 (69%), Gaps = 4/488 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K A++ L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D
Sbjct: 650 MPVMLRSSKCVLGNKTPAQMTVLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVETDP 709
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+++K+++++K N ++ +P+++++KAMG+ +D+E++ +
Sbjct: 710 KKEIVQASVTSSSNERKSKSYIILKKDRLYVKHNVLSEDIPIVILLKAMGIHTDKEMMLL 769
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEE + GV+TQ+QAL + S++K + S + A++
Sbjct: 770 VAGVDKVYQEDFAINFEEAIKVGVFTQQQALDWIGSRIK--INRKQMSYRRTHVQEAVEA 827
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +S+I V NFR K IY A M RR++ A + +DD+DY+GNKRLEL+GQL++L
Sbjct: 828 IASVIISHIEVKDMNFRPKAIYVANMARRVLMAKNDAALVDDRDYLGNKRLELAGQLLAL 887
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L+K ++ FD SV+ H + IT G+ +STGN+ ++R
Sbjct: 888 LFEDLFKKFCFDIKMNIDKVLNKRNRVEAFDAWSVIGMHSNHITQGMNRAISTGNWSLKR 947
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GM+C DTPEGE
Sbjct: 948 FRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMICLADTPEGE 1007
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT++EE P+ +L + LG ED++ + G+E++ P S+ + NG +
Sbjct: 1008 ACGLVKNLALMTHITTNDEEGPIKNLIFMLGAEDIQTVGGKEIYAPGSYTISINGTPMAL 1067
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRP+ F+ A R+LRR G+I EFVS+Y+N Q V++A+D GR+CRPL+I ++G SR+K+
Sbjct: 1068 TRRPKYFLNAFRRLRRMGRISEFVSIYINHHQRAVHVATDDGRICRPLIIVEDGKSRVKK 1127
Query: 479 YHMKELMD 486
+H+++L D
Sbjct: 1128 HHLRKLRD 1135
>J4GNY8_FIBRA (tr|J4GNY8) DNA-directed RNA polymerase OS=Fibroporia radiculosa
(strain TFFH 294) GN=FIBRA_04177 PE=3 SV=1
Length = 1181
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/497 (47%), Positives = 333/497 (67%), Gaps = 15/497 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +CVL ++EA+LA++ ECPLDPGGYF++KG EKVIL+QEQLSKNRII+ +D
Sbjct: 144 LPIMLRSNKCVLTGRNEAQLARMTECPLDPGGYFIVKGTEKVILVQEQLSKNRIIVEVDP 203
Query: 61 NRNIXXXXXXXXXXXXXXXD--IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQ 118
+ I + +K K++L+ N + VP+++ +KA+G++SD+E++
Sbjct: 204 TKGIVQASCTSSTHGGLKSKTYVATKKGKIYLRHNSIHEDVPIVIALKALGIQSDKEILL 263
Query: 119 MV-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALK 177
+ G Y P+ EE A+ G+ T+ QAL ++ S+VK + + + AL+
Sbjct: 264 LTAGNHEAYKSAFSPNLEEAAKLGILTRHQALEYIGSRVK--VNRRVVGPRRPAWEEALE 321
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
L L+++PV +FR K I+ A M RR++ A+ ++ +DD+DYVGNKRLEL+GQL++
Sbjct: 322 ALATIVLAHVPVQGLDFRSKAIFVATMTRRVLMAMDDEKMVDDRDYVGNKRLELAGQLLA 381
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FKT ++++ DK+L KP + + FD + + D IT G +STGN+ ++
Sbjct: 382 LLFEDLFKTFNTNLKSAIDKVLKKPSRTSEFDAFNTMQFQGDHITSGFVRAISTGNWSLK 441
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RF+M+R G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEG
Sbjct: 442 RFKMDRAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEG 501
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEY----------LSGEELHTPDSF 407
EACGLVKNLALMTH+TTD +E P+I + + LGVE + ++G E++ P +F
Sbjct: 502 EACGLVKNLALMTHITTDVDEEPIIRIAFMLGVEGAYFFCICAGHISLVTGAEIYGPGTF 561
Query: 408 LVIFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLV 467
+V NG I+G R P FV+ RKLRRAG+ EFVSVY+N V +ASDGGR+CRP++
Sbjct: 562 VVNVNGTIIGLTRYPARFVSNFRKLRRAGRFSEFVSVYINHHHRTVLIASDGGRICRPMI 621
Query: 468 IADNGISRIKEYHMKEL 484
I +NG R+ H+ +L
Sbjct: 622 IVENGRPRVASDHILQL 638
>C8VU19_EMENI (tr|C8VU19) DNA-directed RNA polymerase OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=ANIA_00321 PE=3 SV=1
Length = 1225
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/488 (47%), Positives = 338/488 (69%), Gaps = 4/488 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K A++ L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D
Sbjct: 219 MPVMLRSSKCVLGNKTPAQMTVLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVETDP 278
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+++K+++++K N ++ +P+++++KAMG+ +D+E++ +
Sbjct: 279 KKEIVQASVTSSSNERKSKSYIILKKDRLYVKHNVLSEDIPIVILLKAMGIHTDKEMMLL 338
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEE + GV+TQ+QAL + S++K + S + A++
Sbjct: 339 VAGVDKVYQEDFAINFEEAIKVGVFTQQQALDWIGSRIK--INRKQMSYRRTHVQEAVEA 396
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +S+I V NFR K IY A M RR++ A + +DD+DY+GNKRLEL+GQL++L
Sbjct: 397 IASVIISHIEVKDMNFRPKAIYVANMARRVLMAKNDAALVDDRDYLGNKRLELAGQLLAL 456
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L+K ++ FD SV+ H + IT G+ +STGN+ ++R
Sbjct: 457 LFEDLFKKFCFDIKMNIDKVLNKRNRVEAFDAWSVIGMHSNHITQGMNRAISTGNWSLKR 516
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GM+C DTPEGE
Sbjct: 517 FRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMICLADTPEGE 576
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT++EE P+ +L + LG ED++ + G+E++ P S+ + NG +
Sbjct: 577 ACGLVKNLALMTHITTNDEEGPIKNLIFMLGAEDIQTVGGKEIYAPGSYTISINGTPMAL 636
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRP+ F+ A R+LRR G+I EFVS+Y+N Q V++A+D GR+CRPL+I ++G SR+K+
Sbjct: 637 TRRPKYFLNAFRRLRRMGRISEFVSIYINHHQRAVHVATDDGRICRPLIIVEDGKSRVKK 696
Query: 479 YHMKELMD 486
+H+++L D
Sbjct: 697 HHLRKLRD 704
>B0D7Q0_LACBS (tr|B0D7Q0) DNA-directed RNA polymerase OS=Laccaria bicolor (strain
S238N-H82 / ATCC MYA-4686) GN=LACBIDRAFT_190099 PE=3
SV=1
Length = 1142
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/487 (47%), Positives = 327/487 (67%), Gaps = 5/487 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +CVL + EA+LA++ ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ D
Sbjct: 143 LPIMLRSSKCVLTGRTEAQLARMTECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVETDT 202
Query: 61 NRNIXXXXXXXXXXXXXXXD--IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQ 118
+ + + +K +++L+ N + VP+++ +KA+G++SD+E++
Sbjct: 203 VKGVVQASCTSSTHGGLKSKTYVATKKGRIYLRHNSIHEDVPIVIALKALGIQSDKEILL 262
Query: 119 MV-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALK 177
+ G Y + E+ A+ GVYT++QAL ++ S+VK + + + AL+
Sbjct: 263 LTAGTTEAYKNTFSANLEDAAKLGVYTRQQALEYIGSRVK--INRRVMGPRRPAWEEALE 320
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
L L+++PV+ +FR K I+ A M RR++ A+ +++ +DD+DYVGNKRLEL+GQL++
Sbjct: 321 ALATIVLAHVPVNGLDFRSKAIFVATMTRRVLMAMQDENMVDDRDYVGNKRLELAGQLLA 380
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FKT ++ + DK+L KP + + FD + + D +T G +STGN+ ++
Sbjct: 381 LLFEDLFKTYNSNLKIAIDKVLKKPSRTSEFDAYNTMQMQGDHLTSGFVRAISTGNWSLK 440
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RF+MER G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWG+LCP DTPEG
Sbjct: 441 RFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGPRALQPSQWGVLCPSDTPEG 500
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TTD EE P+ L + LG+ED+ +G E++ P F+V NG I+G
Sbjct: 501 EACGLVKNLALMTHITTDVEEEPITRLAFMLGIEDINLTTGTEIYGPGVFVVNVNGTIIG 560
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
R P FV R LRRA + EFVSVY+N V++ASDGGR+CRP +I +NG ++
Sbjct: 561 VTRYPARFVAQFRSLRRARRFSEFVSVYINHHHHAVHIASDGGRICRPAIIVENGRPKVA 620
Query: 478 EYHMKEL 484
HM L
Sbjct: 621 SEHMMHL 627
>G8YDB2_PICSO (tr|G8YDB2) DNA-directed RNA polymerase OS=Pichia sorbitophila
(strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC
10061 / NRRL Y-12695) GN=Piso0_002709 PE=3 SV=1
Length = 1158
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/491 (49%), Positives = 330/491 (67%), Gaps = 11/491 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L DE ++A+ ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 151 MPIMLRSNKCILDGIDEHKMAQYDECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 210
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+NI V+ K +K++LK N A+ VP+++V+KA G+ SD E++Q+
Sbjct: 211 KKNIVQASVTSSTHERKSKTYVITKNDKIYLKHNSIAEDVPIVIVLKAAGITSDLEILQL 270
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G+DP Y L +FEE A+ V TQ+QAL ++ +VK R+ +S +EG
Sbjct: 271 VCGQDPNYQDLFAVNFEEAARLEVLTQQQALNYIGKRVKTIRRAGAPKLSQLQEG----- 325
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
++ + +++I V FR K +Y A M RR++ + N +DD+DYVGNKRLEL+GQL
Sbjct: 326 IEAVATTIIAHITVSDLQFREKALYIATMTRRVLMTMHNPKMVDDRDYVGNKRLELAGQL 385
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
+SLLFED FK + + DK+L KP + + FD + H + IT G+ +STGN+
Sbjct: 386 LSLLFEDLFKKFNSDFKANIDKVLKKPSRTSEFDALLSINIHSNNITMGMNRAISTGNWS 445
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTP
Sbjct: 446 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTSDTP 505
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTD+EE P+ +LC+ LG E++ + LH +F V NG +
Sbjct: 506 EGEACGLVKNLALMTHITTDDEELPVKNLCFTLGCENILEIDSATLHAVTNFGVYLNGTL 565
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIAD-NGIS 474
+G R P FV RKLRR+GKI FVS+Y N V++A+DGGR+CRPL+I D S
Sbjct: 566 IGATRFPVSFVDRFRKLRRSGKISAFVSIYTNSHHRAVHIATDGGRICRPLIIVDAENKS 625
Query: 475 RIKEYHMKELM 485
R+K +H+K+L+
Sbjct: 626 RVKAHHLKKLL 636
>C5JTE0_AJEDS (tr|C5JTE0) DNA-directed RNA polymerase OS=Ajellomyces dermatitidis
(strain SLH14081) GN=BDBG_05834 PE=3 SV=1
Length = 1204
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/487 (47%), Positives = 333/487 (68%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K EAE+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 195 MPVMLRSSKCVLSNKSEAEMQLLHECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDL 254
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+M+K++++++ N + VP+++++KAMG++SD+E++ +
Sbjct: 255 KKEIVQASVTSSSNERKSKSYIIMKKDRIYMRHNVLNEDVPIVILLKAMGIQSDKEMLLL 314
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSN-ISSEKEGRGSPALK 177
V G D Y +FEE + G+YTQ QAL ++ S++K + N + A++
Sbjct: 315 VAGIDSTYQEDFSINFEEAVKLGIYTQHQALEYIGSRIKINRKPNSFGITRRNHVQEAIE 374
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y A M RR++ A + +DD+DYVGNKRLEL+GQL++
Sbjct: 375 AISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKRLELAGQLLA 434
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + +FD V+A H + IT G+ +STGN+ ++
Sbjct: 435 LLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRAISTGNWSLK 494
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEG
Sbjct: 495 RFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPSDTPEG 554
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G ELH ++++ NG +
Sbjct: 555 EACGLVKNLALMTHITTNDEEEPVRKLIFALGAEDVQTVGGRELHGQGAYIIFLNGSPIA 614
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ + R+LRR G++ EF+SV++N Q V++A+D GR+CRPL++ ++G S++
Sbjct: 615 LTRRPKFFLNSFRRLRRTGRVSEFISVFINHHQNAVHIATDDGRICRPLIVVEDGKSKVT 674
Query: 478 EYHMKEL 484
+ H+ L
Sbjct: 675 KSHLWAL 681
>H3C732_TETNG (tr|H3C732) DNA-directed RNA polymerase (Fragment) OS=Tetraodon
nigroviridis GN=POLR3B (1 of 2) PE=3 SV=1
Length = 1153
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/496 (48%), Positives = 327/496 (65%), Gaps = 18/496 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K E AKL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 148 MPIMLRSSNCVLTGKTPMEFAKLNECPLDPGGYFIVKGQEKVILIQEQLSKNRIIVDQDR 207
Query: 61 NRNIXXXXX------------XXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAM 108
+ ++++++ + +L+ N ++ P+ ++ K M
Sbjct: 208 KGAVGASVTRCFYIGPTFVQLYSTHEKKSRTNMIVKQGRFYLRHNTLSEDAPIAIIFKGM 267
Query: 109 GMESDQEVVQMVGRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEK 168
G+ESDQE+VQM+G + PS EEC + ++TQ QAL +L +KV+R K
Sbjct: 268 GVESDQEIVQMIGTEENVMASFAPSLEECQKAQIFTQTQALRYLGNKVRRQRM--WGGPK 325
Query: 169 EGRGSPALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKR 228
+ + A ++L L+++PV + NFR KCIY AVM+RR++ A + +DD+DY GNKR
Sbjct: 326 KTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILA-QGDNKVDDRDYYGNKR 384
Query: 229 LELSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLEST 288
LEL+GQL+ FED FK +++ +D+++ K +A +FD+ V QD IT+G+ +
Sbjct: 385 LELAGQLLPFFFEDLFKKFNSELKKIADQIIPK-QRAAQFDV--VKHMRQDQITNGMVNA 441
Query: 289 LSTGNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGM 348
+STGN+ ++RF+M+R+G+TQVL RLSFI LG MTR+S QFEK+RKVSGPR+LQPSQWGM
Sbjct: 442 ISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGM 501
Query: 349 LCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFL 408
LCP DTPEGEACGLVKNLALMTH+TTD E+ P+I L + LGVED+ L GEEL P FL
Sbjct: 502 LCPSDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFL 561
Query: 409 VIFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVI 468
V NG ILG R + V R +RRAG I EFVS+ N CVY++SDGGR+CRP +I
Sbjct: 562 VFLNGNILGVIRDHQKLVGTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYII 621
Query: 469 ADNGISRIKEYHMKEL 484
G +K HM++L
Sbjct: 622 VKKGQPMVKNKHMEDL 637
>G8YFR8_PICSO (tr|G8YFR8) DNA-directed RNA polymerase OS=Pichia sorbitophila
(strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC
10061 / NRRL Y-12695) GN=Piso0_002709 PE=3 SV=1
Length = 1158
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/491 (48%), Positives = 330/491 (67%), Gaps = 11/491 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L DE ++A+ ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 151 MPIMLRSNKCILDGIDEHKMAQYDECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 210
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+NI V+ K +K++LK N A+ VP+++V+KA G+ SD E++Q+
Sbjct: 211 KKNIVQASVTSSTHERKSKTYVITKNDKIYLKHNSIAEDVPIVIVLKAAGITSDLEILQL 270
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G+DP Y L +FEE A+ V TQ+QAL ++ +VK R+ +S +EG
Sbjct: 271 VCGQDPNYQDLFAVNFEEAARLEVLTQQQALNYIGKRVKTIRRAGAPKLSQLQEG----- 325
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
++ + +++I V FR K +Y A M RR++ + N +DD+DYVGNKRLEL+GQL
Sbjct: 326 IEAVATTIIAHITVSDLQFREKALYIATMTRRVLMTMHNPKMVDDRDYVGNKRLELAGQL 385
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
+SLLFED FK + + DK+L KP + + FD + H + IT G+ +STGN+
Sbjct: 386 LSLLFEDLFKKFNSDFKANIDKVLKKPSRTSEFDALLSINIHSNNITMGMNRAISTGNWS 445
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTP
Sbjct: 446 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTSDTP 505
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTD+EE P+ +LC+ LG E++ + LH +F + NG +
Sbjct: 506 EGEACGLVKNLALMTHITTDDEELPVKNLCFTLGCENILEIDSATLHAVTNFGIYLNGTL 565
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIAD-NGIS 474
+G R P FV RKLRR+GKI FVS+Y N V++A+DGGR+CRPL+I D S
Sbjct: 566 IGATRFPVSFVDRFRKLRRSGKISAFVSIYTNSHHRAVHIATDGGRICRPLIIVDAENKS 625
Query: 475 RIKEYHMKELM 485
R+K +H+K+L+
Sbjct: 626 RVKAHHLKKLL 636
>F2TRM7_AJEDA (tr|F2TRM7) DNA-directed RNA polymerase OS=Ajellomyces dermatitidis
(strain ATCC 18188 / CBS 674.68) GN=BDDG_08835 PE=3 SV=1
Length = 1228
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/487 (47%), Positives = 333/487 (68%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K EAE+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 219 MPVMLRSSKCVLSNKSEAEMQLLHECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDL 278
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+M+K++++++ N + VP+++++KAMG++SD+E++ +
Sbjct: 279 KKEIVQASVTSSSNERKSKSYIIMKKDRIYMRHNVLNEDVPIVILLKAMGIQSDKEMLLL 338
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSN-ISSEKEGRGSPALK 177
V G D Y +FEE + G+YTQ QAL ++ S++K + N + A++
Sbjct: 339 VAGIDSTYQEDFSINFEEAVKLGIYTQHQALEYIGSRIKINRKPNSFGITRRNHVQEAIE 398
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y A M RR++ A + +DD+DYVGNKRLEL+GQL++
Sbjct: 399 AISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKRLELAGQLLA 458
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + +FD V+A H + IT G+ +STGN+ ++
Sbjct: 459 LLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRAISTGNWSLK 518
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEG
Sbjct: 519 RFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPSDTPEG 578
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G ELH ++++ NG +
Sbjct: 579 EACGLVKNLALMTHITTNDEEEPVRKLIFALGAEDVQTVGGRELHGQGAYIIFLNGSPIA 638
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ + R+LRR G++ EF+SV++N Q V++A+D GR+CRPL++ ++G S++
Sbjct: 639 LTRRPKFFLNSFRRLRRTGRVSEFISVFINHHQNAVHIATDDGRICRPLIVVEDGKSKVT 698
Query: 478 EYHMKEL 484
+ H+ L
Sbjct: 699 KSHLWAL 705
>C5GKN6_AJEDR (tr|C5GKN6) DNA-directed RNA polymerase OS=Ajellomyces dermatitidis
(strain ER-3 / ATCC MYA-2586) GN=BDCG_05625 PE=3 SV=1
Length = 1228
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/487 (47%), Positives = 333/487 (68%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K EAE+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 219 MPVMLRSSKCVLSNKSEAEMQLLHECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDL 278
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+M+K++++++ N + VP+++++KAMG++SD+E++ +
Sbjct: 279 KKEIVQASVTSSSNERKSKSYIIMKKDRIYMRHNVLNEDVPIVILLKAMGIQSDKEMLLL 338
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSN-ISSEKEGRGSPALK 177
V G D Y +FEE + G+YTQ QAL ++ S++K + N + A++
Sbjct: 339 VAGIDSTYQEDFSINFEEAVKLGIYTQHQALEYIGSRIKINRKPNSFGITRRNHVQEAIE 398
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y A M RR++ A + +DD+DYVGNKRLEL+GQL++
Sbjct: 399 AISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKRLELAGQLLA 458
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + +FD V+A H + IT G+ +STGN+ ++
Sbjct: 459 LLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRAISTGNWSLK 518
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEG
Sbjct: 519 RFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPSDTPEG 578
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G ELH ++++ NG +
Sbjct: 579 EACGLVKNLALMTHITTNDEEEPVRKLIFALGAEDVQTVGGRELHGQGAYIIFLNGSPIA 638
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ + R+LRR G++ EF+SV++N Q V++A+D GR+CRPL++ ++G S++
Sbjct: 639 LTRRPKFFLNSFRRLRRTGRVSEFISVFINHHQNAVHIATDDGRICRPLIVVEDGKSKVT 698
Query: 478 EYHMKEL 484
+ H+ L
Sbjct: 699 KSHLWAL 705
>H8X656_CANO9 (tr|H8X656) DNA-directed RNA polymerase OS=Candida orthopsilosis
(strain 90-125) GN=CORT_0D04640 PE=3 SV=1
Length = 1149
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/491 (48%), Positives = 331/491 (67%), Gaps = 10/491 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L D+ +A++ ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 146 MPIMLRSNKCMLDGMDDKMMAQVDECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 205
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K +K++LK N ++ +P+++V+KA G+ SD E++Q+
Sbjct: 206 KKGIVQASVTSSTHERKSKTYVITKNDKIYLKHNSISEDIPIVIVLKAAGVTSDLEILQL 265
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G DP Y L + +FEE A+ V+TQ+QAL +L +VK R+ +S +EG
Sbjct: 266 VCGSDPNYQDLFVVNFEEAAKLEVFTQQQALLYLGKRVKTIRRAGAPKLSQLQEG----- 320
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
++ + ++++ V FR K +Y A+M RR++ A+ N +DD+DYVGNKRLEL+GQL
Sbjct: 321 IEAIATTIIAHLTVVDLQFREKALYMAMMARRVVMAMHNPKMVDDRDYVGNKRLELAGQL 380
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
+SLLFED FK + + DK+L KP + + FD + H + IT GL +STGN+
Sbjct: 381 MSLLFEDLFKKFNSDFKANIDKILKKPSRTSEFDALLSINIHSNNITMGLNRAISTGNWS 440
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTP
Sbjct: 441 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTP 500
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTD+EE P+ LC LG E + L LH +F V NG +
Sbjct: 501 EGEACGLVKNLALMTHITTDDEEGPIKKLCTALGCESILGLDSATLHVEGNFGVYLNGTL 560
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISR 475
LG R P FVT R+LRRAGK+ FVS+Y N Q V++A+DGGR+CRPL+I +N S+
Sbjct: 561 LGATRFPVKFVTDFRRLRRAGKVSAFVSIYTNTHQQAVHIATDGGRICRPLIIVENNKSK 620
Query: 476 IKEYHMKELMD 486
++ H+ +L++
Sbjct: 621 VEANHLAKLLN 631
>G7DT94_MIXOS (tr|G7DT94) DNA-directed RNA polymerase OS=Mixia osmundae (strain
CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) GN=Mo00387
PE=3 SV=1
Length = 1152
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/491 (47%), Positives = 324/491 (65%), Gaps = 7/491 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMD- 59
+PVMLRS +CVL++KD ++ L ECPLDPGGYFV+KG EKVIL+QEQLSKNR+++ D
Sbjct: 148 IPVMLRSNKCVLWDKDPEQMQSLTECPLDPGGYFVVKGTEKVILVQEQLSKNRVLVENDG 207
Query: 60 --KNRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVV 117
++ I + + +K+ L+ N + VP+++ +KA+G+ D E++
Sbjct: 208 RGPSKGIIASVTSSTLERKSKTYVAEKSKKIVLRHNSLHEDVPIVIALKALGIVGDHEIM 267
Query: 118 QMV-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGR---GS 173
+V G P +FE+ + G+YT+ QAL ++ +VK S R
Sbjct: 268 LLVCGTSPELRERFAINFEDSTRLGIYTRTQALEYVGHRVKLSKRVAPGGNNFVRRPVAE 327
Query: 174 PALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSG 233
AL++L L+++PV NFR K IY A+M+RR++ A+L+ DD+DYVGNKRLEL+G
Sbjct: 328 EALELLATLVLAHVPVENLNFRPKAIYMALMIRRVLAAMLDPTMTDDRDYVGNKRLELAG 387
Query: 234 QLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGN 293
QL+SLLFED FK + + DK+L KP + N FD VL+ IT G ++TGN
Sbjct: 388 QLLSLLFEDLFKLFNRDFKTNVDKMLKKPSRTNEFDGLKVLSMQTGSITDGFVRAIATGN 447
Query: 294 FEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCD 353
+ ++RFRMER G+T VL RLS+I LG MTR++ QFEK+RKVSGPRALQ SQWGMLCP D
Sbjct: 448 WSLKRFRMERAGITHVLSRLSYISALGMMTRITSQFEKTRKVSGPRALQASQWGMLCPSD 507
Query: 354 TPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNG 413
TPEGEACGLVKNLALMTH+TTD EE L L Y LG+ED+ ++G EL+ P +F+V NG
Sbjct: 508 TPEGEACGLVKNLALMTHITTDVEETSLWRLAYVLGLEDVCNVTGTELYAPGTFVVYLNG 567
Query: 414 LILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGI 473
++LG + PR F R RRAG+I EFVS+Y+N +Q +++ASDGGR+CRP++I D G
Sbjct: 568 VLLGLTQEPRVFTQRFRAFRRAGEISEFVSIYINTQQAAIHIASDGGRICRPMIIVDRGR 627
Query: 474 SRIKEYHMKEL 484
R+ + H+ L
Sbjct: 628 PRVTDAHIAAL 638
>M7X8Z1_RHOTO (tr|M7X8Z1) DNA-directed RNA polymerase III subunit RPC2
OS=Rhodosporidium toruloides NP11 GN=RHTO_03688 PE=4
SV=1
Length = 1310
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/504 (49%), Positives = 334/504 (66%), Gaps = 20/504 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +CVL K++A+LA++ ECPLDPGGYF++KG EKVIL+QEQLSKNRII+ +
Sbjct: 284 LPIMLRSNKCVLMGKNKAQLAQMNECPLDPGGYFIVKGTEKVILVQEQLSKNRIIVETEP 343
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ + V+ K K++LK N + +P+ VV++A+G+ S +E+VQ+
Sbjct: 344 KKGLVQASVTSSTHERKSKTYVLTKHGKIYLKHNSIHEDIPIGVVLRALGIVSAREIVQL 403
Query: 120 V-GRDPRYSLLLLPSFEEC----AQNG----VYTQEQALAHLDSKVK---RSMFSNISSE 167
V G D Y + EE ++G V TQ+QAL ++ +VK + + S
Sbjct: 404 VCGNDDDYRAAFGINIEEMDDLKTKSGQPIPVQTQQQALDYIGHRVKIIRKPAGTPGSGG 463
Query: 168 KEGRGSP-------ALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDD 220
E +P AL+VL L+++PV N R K IY A M RR++ A+L+ +DD
Sbjct: 464 AEKSWAPRRPASEEALEVLATVVLAHVPVEDLNLRPKAIYIANMARRVLMAMLDPKNVDD 523
Query: 221 KDYVGNKRLELSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDL 280
+DYVGNKRLEL+GQL+SLLFED FK ++ + DK+L K ++A FD H D
Sbjct: 524 RDYVGNKRLELAGQLLSLLFEDLFKKFNHDLKMNIDKILKKSNRATEFDAIKQFQLHGDG 583
Query: 281 ITHGLESTLSTGNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRA 340
IT G +STGN+ ++RF+MER G+T VL RLSFI LG MTR+S QFEK+RKVSGPRA
Sbjct: 584 ITQGFVRAISTGNWSLKRFKMERAGITHVLSRLSFISALGMMTRISSQFEKTRKVSGPRA 643
Query: 341 LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEE 400
LQPSQWGMLCP DTPEGEACGLVKNLALMTH+TTD EE P+ ++C+ +GVED+ L G E
Sbjct: 644 LQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDVEEEPIWNICFLIGVEDINLLDGTE 703
Query: 401 LHTPDSFLVIFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGG 460
++ +V NG +LG R F+ R LRRAG+I EFVS+YVN +Q +++ASDGG
Sbjct: 704 IYAEGHLVVYLNGNVLGLTRCGPRFIRTFRHLRRAGRINEFVSIYVNLQQQAIHIASDGG 763
Query: 461 RVCRPLVIADNGISRIKEYHMKEL 484
R+CRPL+I +NG S++KE HMK L
Sbjct: 764 RICRPLIIVENGQSKVKELHMKML 787
>C5M3E6_CANTT (tr|C5M3E6) DNA-directed RNA polymerase OS=Candida tropicalis
(strain ATCC MYA-3404 / T1) GN=CTRG_00585 PE=3 SV=1
Length = 1159
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/491 (48%), Positives = 329/491 (67%), Gaps = 10/491 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +C+L EA +A++ ECPLDPGGYFV+ G EKVIL+QEQLSKNRII+ D+
Sbjct: 152 MPVMLRSNKCMLEGMSEASMAQVEECPLDPGGYFVVNGTEKVILVQEQLSKNRIIVEADE 211
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K +K++LK N ++ +P+++++KA G+ SD E++Q+
Sbjct: 212 KKAIVQASVTSSTHERKSKTYVITKNDKIYLKHNSVSEDIPIVIILKAAGITSDLEILQL 271
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G DP Y L + +FEE A+ V+TQ+QAL ++ +VK R+ +S +EG
Sbjct: 272 VCGTDPNYQDLFVVNFEEAAKLEVFTQQQALLYVGKRVKTIRRAGAPKLSQLQEG----- 326
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
++ + ++++ V FR K +Y A M RR++ A+ N +DD+DYVGNKRLEL+GQL
Sbjct: 327 IEAIATTIVAHLTVSDLQFREKALYIATMARRVVMAMHNPKMVDDRDYVGNKRLELAGQL 386
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
+SLLFED FK + + DK+L KP + + FD + H + IT GL +STGN+
Sbjct: 387 MSLLFEDLFKKFNSDFKANIDKVLKKPSRTSEFDALLSINIHSNNITMGLNRAISTGNWS 446
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTP
Sbjct: 447 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTP 506
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTD+EEAP+ LC LG E + L LH+ +F V NG +
Sbjct: 507 EGEACGLVKNLALMTHITTDDEEAPVKKLCIALGCEPIYALDSATLHSEGNFGVYLNGTL 566
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISR 475
+G R P+ FV R LRR GK+ F+S+Y N V++A+DGGR+CRPL+I +NG S+
Sbjct: 567 IGTTRFPQKFVNDFRHLRRNGKVSAFISIYTNTHHQAVHIATDGGRICRPLIIVENGESK 626
Query: 476 IKEYHMKELMD 486
+ H+ +L++
Sbjct: 627 VTAEHLAKLLN 637
>Q6FLJ9_CANGA (tr|Q6FLJ9) DNA-directed RNA polymerase OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CAGL0L02849g PE=3 SV=1
Length = 1133
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/487 (48%), Positives = 328/487 (67%), Gaps = 9/487 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L+ DE +A+L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 140 MPIMLRSNKCILHGADEKMMARLSECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 199
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
++I V+ K K++LK N A++VP+++V+KA G+ SD E++Q+
Sbjct: 200 KKDIVQASVTSSTHERKSKTYVVTKNGKIYLKHNSIAEEVPIVIVLKAAGIISDLEIMQL 259
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y + + EE A+ + TQ+QAL ++ +KVK ++ +EG ++
Sbjct: 260 VCGNDSSYQDIFSVNLEEAAKLNICTQQQALEYIGAKVKTMRRQKLTILQEG-----IEA 314
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ ++++ V +FR K +Y A M RR++ A+ N +DD+DYVGNKRLEL+GQLISL
Sbjct: 315 IATTIIAHLTVEALDFREKALYIATMTRRVVMAMHNPKMVDDRDYVGNKRLELAGQLISL 374
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK + S DK+L KP++A +D + H + IT GL +STGN+ ++R
Sbjct: 375 LFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNRAISTGNWSLKR 434
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTPEGE
Sbjct: 435 FKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTPEGE 494
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TTD+EE P+ LCY LGVE + L LH ++ V NG ++G
Sbjct: 495 ACGLVKNLALMTHITTDDEEEPIRKLCYVLGVEPISLLDSASLHL--NYGVYLNGTLIGT 552
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
+ P FV+ R LRR GK+ EF+S+Y N+ V++A+DGGR+CRPL+I +G S ++
Sbjct: 553 TKFPSNFVSRFRFLRRTGKVSEFISIYTNDHHNAVHIATDGGRICRPLIIVKDGKSMVEA 612
Query: 479 YHMKELM 485
H+K L+
Sbjct: 613 EHLKRLL 619
>A1CS37_ASPCL (tr|A1CS37) DNA-directed RNA polymerase OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=ACLA_031930 PE=3 SV=1
Length = 1246
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/488 (47%), Positives = 336/488 (68%), Gaps = 4/488 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +CVL K +E+ L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D
Sbjct: 241 MPIMLRSSKCVLANKTPSEMTVLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVETDP 300
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+++K+K+++K N + +P++++++AMG+ ++QE++ +
Sbjct: 301 KKEIVQASVTSSSNERKSKSYIILKKDKLYVKHNVLNEDIPIVILLRAMGIHTEQEMLLL 360
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FE+ + G+YTQ+QAL + +++K + S + A++
Sbjct: 361 VAGVDSLYQDDFAINFEDSIKLGIYTQQQALDWIGARIK--INRKQMSYRRTHIQEAVEA 418
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +S+I V NFR K +Y A M RR++ A + +DD+DY+GNKRLEL+GQL++L
Sbjct: 419 IASVIISHIEVKNMNFRPKAVYVAHMARRVLMAKNDPSLVDDRDYLGNKRLELAGQLLAL 478
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L+K ++A FD SV++ H + IT G+ +STGN+ ++R
Sbjct: 479 LFEDLFKKFCFDIKMNIDKVLNKRNRAEAFDAWSVMSMHGNHITQGMNRAISTGNWSLKR 538
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEGE
Sbjct: 539 FRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPADTPEGE 598
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT++EE P+ +L + LG ED+ L G++L+TP S+ + NG +
Sbjct: 599 ACGLVKNLALMTHITTNDEEGPIKNLVFMLGAEDILALGGKQLYTPGSYTISINGTPIAL 658
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRP+ F+ A R+LRR G+I EFVS+Y+N Q V++A+D GR+CRPL++ +NG S +
Sbjct: 659 TRRPKFFLNAFRRLRRMGRISEFVSIYINHHQCAVHIATDDGRICRPLIVVENGKSLVTG 718
Query: 479 YHMKELMD 486
H+++L D
Sbjct: 719 EHLEKLRD 726
>C0P0A1_AJECG (tr|C0P0A1) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain G186AR / H82 / ATCC MYA-2454 / RMSCC 2432)
GN=HCBG_08820 PE=3 SV=1
Length = 1227
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/487 (46%), Positives = 334/487 (68%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K EAE+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 218 MPVMLRSSKCVLSNKSEAEMQLLQECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDL 277
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+++K++++++ N ++ VP+++++KAMG++SD+E++ +
Sbjct: 278 KKEIVQASVTSSSNERKSKSYIILKKDRIYMRHNVLSEDVPIVILLKAMGIQSDKEMLLL 337
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSN-ISSEKEGRGSPALK 177
V G D + +FEE + G+YTQ QAL ++ S++K + N + A++
Sbjct: 338 VAGIDSTFQEDFAINFEESVKLGIYTQHQALEYIGSRIKINRKPNSFGITRRNHVQEAIE 397
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y A M RR++ A + +DD+DYVGNKRLEL+GQL++
Sbjct: 398 AISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKRLELAGQLLA 457
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + +FD V+A H + IT G+ +STGN+ ++
Sbjct: 458 LLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRAISTGNWSLK 517
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEG
Sbjct: 518 RFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPSDTPEG 577
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G ELH ++++ NG +
Sbjct: 578 EACGLVKNLALMTHITTNDEEEPVRKLIFALGAEDVQTVGGRELHGQGAYIIFLNGSPIA 637
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ + R+LRR G++ EF+SV++N Q V++A+D GR+CRPL+I ++G S++
Sbjct: 638 LTRRPKFFLNSFRRLRRTGRVSEFISVFINHHQNAVHVATDDGRICRPLIIVEDGKSKVT 697
Query: 478 EYHMKEL 484
H++ L
Sbjct: 698 NRHLRLL 704
>H2M5Z0_ORYLA (tr|H2M5Z0) DNA-directed RNA polymerase OS=Oryzias latipes PE=3
SV=1
Length = 1135
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/484 (49%), Positives = 324/484 (66%), Gaps = 5/484 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K E +KL ECPLDPGGYF++KG EKVILIQEQLSKNRII+ D+
Sbjct: 136 MPIMLRSSNCVLTGKTPMEFSKLNECPLDPGGYFIVKGQEKVILIQEQLSKNRIIVDQDR 195
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ +I++++ + +L+ N ++ P+ ++ K MG+ESDQE+VQM+
Sbjct: 196 KGTVGASVTSSTHEKKSRTNIIVKQGRFYLRHNTLSEDAPIAIIFKGMGVESDQEIVQMI 255
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + PS EEC + ++TQ Q L + +++ R K + S L++L
Sbjct: 256 GTEEHVMANFAPSLEECQKAQIFTQTQDLFYFNNRGFRQTRGGGGGFK-WKQSQFLELLN 314
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L + V + NFR KCIY AVM+RR++ A ++ +DD+DY GNKRLEL+GQL+SLLF
Sbjct: 315 RAILYLLQVKEFNFRAKCIYLAVMVRRVILA-QGENKVDDRDYYGNKRLELAGQLLSLLF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D+++ K +A +FD+ V QD IT+G+ + +STGN+ ++RF+
Sbjct: 374 EDLFKKFNSELKKIADQIIPK-QRAAQFDV--VKHMRQDQITNGMVNAISTGNWSLKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD E+ P+I L LGVED+ L GEEL P FLV NG ILG R
Sbjct: 491 GLVKNLALMTHITTDMEDGPIIKLALNLGVEDVNLLCGEELSYPSVFLVFLNGNILGVIR 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
V+ R +RRAG I EFVS+ N CVY++SDGGR+CRP +I G +K H
Sbjct: 551 NHHKLVSTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKGQPMVKSKH 610
Query: 481 MKEL 484
+++L
Sbjct: 611 IEDL 614
>B6QHR9_PENMQ (tr|B6QHR9) DNA-directed RNA polymerase OS=Penicillium marneffei
(strain ATCC 18224 / CBS 334.59 / QM 7333)
GN=PMAA_095190 PE=3 SV=1
Length = 1212
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/488 (48%), Positives = 332/488 (68%), Gaps = 4/488 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +CVL K E+ L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D
Sbjct: 205 MPIMLRSSKCVLSNKKPNEMHLLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVETDP 264
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+++K++++LK N ++ VPL++V+KAMG+ SD+E++ +
Sbjct: 265 KKEIVQASVTSSSNERKSKSYIILKKDRLYLKHNVLSEDVPLVIVLKAMGVHSDKEMMLL 324
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEE + V+TQ+QAL + SK+K + I K+ A++
Sbjct: 325 VAGVDDVYQEDFAINFEEAIKQNVFTQQQALDWIGSKIKINR-GKIGGYKKTHIEEAIEA 383
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +S++ V +FR K IY A M RR++ A + D +DD+DYVGNKRLEL+GQL++L
Sbjct: 384 ISSVIISHVEVTDMDFRPKAIYVANMARRVLMAKHDSDMVDDRDYVGNKRLELAGQLLAL 443
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + K+L K + FD SV+ H + ITHG+ +STGN+ ++R
Sbjct: 444 LFEDLFKKFQFDIKMNITKVLGK-RRREIFDAMSVVTLHGNHITHGMNRAISTGNWSLKR 502
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEGE
Sbjct: 503 FRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPSDTPEGE 562
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT++EE P+ L + LG ED+ LSG+E++ ++++ NG +
Sbjct: 563 ACGLVKNLALMTHITTNDEEGPVSKLVFMLGAEDITTLSGKEIYGLGAYIISMNGTPIAL 622
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRP+ F+ A R+LRR G+I EFVS+Y+N Q V++A+D GR+CRPL++ +NG +K
Sbjct: 623 TRRPKYFLNAFRRLRRMGRISEFVSIYINHHQRAVHIATDDGRICRPLIVVENGKPLVKA 682
Query: 479 YHMKELMD 486
H+++L D
Sbjct: 683 SHLEKLRD 690
>G3B8K7_CANTC (tr|G3B8K7) DNA-directed RNA polymerase OS=Candida tenuis (strain
ATCC 10573 / BCRC 21748 / CBS 615 / JCM 9827 / NBRC
10315 / NRRL Y-1498 / VKM Y-70) GN=CANTEDRAFT_108778
PE=3 SV=1
Length = 1165
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/490 (47%), Positives = 328/490 (66%), Gaps = 11/490 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L D+ ++AK ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 157 MPIMLRSNKCLLDGIDDKKMAKYDECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 216
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K +K++LK N ++ VP+++++KA G+ SD E++Q+
Sbjct: 217 KKGIVQASVTSSTHERKSKTYVITKNDKIYLKHNSISEDVPIVIILKAAGITSDLEILQL 276
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G DP Y L +FEE A+ ++TQ+QAL ++ +VK R+ +S +EG
Sbjct: 277 VCGNDPNYQDLFAINFEEAAKLEIFTQQQALHYVGKRVKTIRRAGAPKLSQLQEG----- 331
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
++ + +++I V FR K +Y A+M RR++ + N +DD+DYVGNKRLEL+GQL
Sbjct: 332 IEAIATTIIAHITVSDLQFREKALYIAMMTRRVLMTMENPKMVDDRDYVGNKRLELAGQL 391
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
+SLLFED FK + + DK+L KP +A+ FD + H + IT G+ +STGN+
Sbjct: 392 MSLLFEDLFKKFNSDFKANIDKILKKPSRASEFDALLSINIHSNNITMGMNRAISTGNWS 451
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTP
Sbjct: 452 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTSDTP 511
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTD+EE P+ LC+ LG ED+ + LH ++ + NG +
Sbjct: 512 EGEACGLVKNLALMTHITTDDEEEPIKRLCFILGCEDILEVDSASLHAKGNYGIYLNGTL 571
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIAD-NGIS 474
+G R P FV R LRR GKI F+S+Y N Q V++A+DGGR+CRPL+I D N +S
Sbjct: 572 IGTTRFPAKFVGDFRNLRRTGKISAFISIYTNSHQSAVHIATDGGRICRPLIIVDKNNVS 631
Query: 475 RIKEYHMKEL 484
++K H+ +L
Sbjct: 632 KVKAKHLLKL 641
>C4Y486_CLAL4 (tr|C4Y486) DNA-directed RNA polymerase OS=Clavispora lusitaniae
(strain ATCC 42720) GN=CLUG_02458 PE=3 SV=1
Length = 1159
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/492 (47%), Positives = 332/492 (67%), Gaps = 12/492 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +CVL DE ++A ECP+DPGGYF++ G EKVILIQEQLSKNRII+ D+
Sbjct: 151 MPIMLRSNKCVLDGIDEHQMAVFEECPIDPGGYFIVNGTEKVILIQEQLSKNRIIVEADE 210
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K EK++LK N A+ VP++VV+KA G+ SD E++Q+
Sbjct: 211 KKAIVQASVTSSTHERKSKTYVISKNEKIYLKHNSIAEDVPIVVVLKAAGIVSDMEILQL 270
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G + +Y L +FEE A+ ++TQ+QAL ++ +VK R+ +S +EG
Sbjct: 271 VCGANSQYQDLFAINFEEAAKLEIFTQQQALLYIGKRVKTVRRAGAPKLSQLQEG----- 325
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
++ + ++++ V NFR K +Y A+M R+++ + N +DD+DYVGNKRLEL+GQL
Sbjct: 326 IEAIATTVIAHLTVSDLNFREKALYIAIMARKVLMTMHNPSMVDDRDYVGNKRLELAGQL 385
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
+SLLFED FK + + DK+L KP + + FD + H + IT G+ +STGN+
Sbjct: 386 MSLLFEDLFKKFNTDFKANIDKILKKPSRTSEFDALLSINIHSNNITMGMNRAISTGNWS 445
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTP
Sbjct: 446 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTSDTP 505
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTD+EE P+ LC+ LG ED+ + ++T ++ V NG +
Sbjct: 506 EGEACGLVKNLALMTHITTDDEEEPIKRLCFILGCEDIYSIDSATIYTEGNYGVFLNGTM 565
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIAD--NGI 473
+G R P FV R+LRR+GK+ EF+S++ N Q V++A+DGGRVCRPL+I D G
Sbjct: 566 VGTTRFPVKFVKDFRRLRRSGKVSEFISIFTNSHQAAVHIATDGGRVCRPLIIVDEVTGQ 625
Query: 474 SRIKEYHMKELM 485
R++ +H+K+L+
Sbjct: 626 PRVEAHHLKKLL 637
>G8BG27_CANPC (tr|G8BG27) DNA-directed RNA polymerase OS=Candida parapsilosis
(strain CDC 317 / ATCC MYA-4646) GN=CPAR2_204540 PE=3
SV=1
Length = 1149
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/491 (48%), Positives = 330/491 (67%), Gaps = 10/491 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L D+ +A++ ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 146 MPIMLRSNKCMLDGMDDKMMAQVDECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 205
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K +K++LK N ++ +P+++V+KA G+ SD E++Q+
Sbjct: 206 KKGIVQASVTSSTHERKSKTYVITKNDKIYLKHNSISEDIPIVIVLKAAGVTSDLEILQL 265
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G + Y L + +FEE A+ V+TQ+QAL +L +VK R+ +S +EG
Sbjct: 266 VCGSNSNYQDLFVVNFEEAAKLEVFTQQQALLYLGKRVKTIRRAGAPKLSQLQEG----- 320
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
++ + ++++ V FR K +Y AVM RR++ A+ N +DD+DYVGNKRLEL+GQL
Sbjct: 321 IEAIATTIIAHLTVVDLQFREKALYMAVMARRVIMAMHNPKMVDDRDYVGNKRLELAGQL 380
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
+SLLFED FK + + DK+L KP + + FD + H + IT GL +STGN+
Sbjct: 381 MSLLFEDLFKKFNSDFKANIDKILKKPSRTSEFDALLSINIHSNNITMGLNRAISTGNWS 440
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTP
Sbjct: 441 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTP 500
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTD+EE P+ LC LG E + L LH +F + NG +
Sbjct: 501 EGEACGLVKNLALMTHITTDDEENPIKKLCTALGCESILGLDSATLHVEGNFGIYLNGTL 560
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISR 475
LG R P FVT R+LRRAGK+ FVS+Y N Q V++A+DGGR+CRPL+I +N S+
Sbjct: 561 LGTTRFPVKFVTDFRRLRRAGKVSAFVSIYTNSHQQAVHIATDGGRICRPLIIVENNKSK 620
Query: 476 IKEYHMKELMD 486
++ H+ +L++
Sbjct: 621 VEAKHLTKLLN 631
>C6HGH3_AJECH (tr|C6HGH3) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain H143) GN=HCDG_05064 PE=3 SV=1
Length = 1227
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/487 (46%), Positives = 333/487 (68%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K EAE+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 218 MPVMLRSSKCVLSNKSEAEMQLLQECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDL 277
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+++K++++++ N ++ VP+++++KAMG++SD+E++ +
Sbjct: 278 KKEIVQASVTSSSNERKSKSYIILKKDRIYMRHNVLSEDVPIVILLKAMGIQSDKEMLLL 337
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSN-ISSEKEGRGSPALK 177
V G D + +FEE + +YTQ QAL ++ S++K + N + A++
Sbjct: 338 VAGIDSTFQEDFAINFEESVKLSIYTQHQALEYIGSRIKINRKPNSFGITRRNHVQEAIE 397
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y A M RR++ A + +DD+DYVGNKRLEL+GQL++
Sbjct: 398 AISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKRLELAGQLLA 457
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + +FD V+A H + IT G+ +STGN+ ++
Sbjct: 458 LLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRAISTGNWSLK 517
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG +TR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEG
Sbjct: 518 RFRMERAGVTHVLSRLSYIAALGMLTRISSQFEKTRKVSGPRALQPSQFGMLCPSDTPEG 577
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G ELH ++++ NG +
Sbjct: 578 EACGLVKNLALMTHITTNDEEEPVRKLIFALGAEDVQTVGGRELHGQGAYIIFLNGSPIA 637
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ + R+LRR G++ EF+SV++N Q V++A+D GR+CRPL+I ++G S++
Sbjct: 638 LTRRPKFFLNSFRRLRRTGRVSEFISVFINHHQNAVHVATDDGRICRPLIIVEDGKSKVT 697
Query: 478 EYHMKEL 484
H++ L
Sbjct: 698 NRHLRLL 704
>B5RUZ7_DEBHA (tr|B5RUZ7) DNA-directed RNA polymerase OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=DEHA2G23232g PE=3 SV=1
Length = 1165
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/491 (47%), Positives = 332/491 (67%), Gaps = 11/491 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L DE ++A+ ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 154 MPIMLRSNKCILDGIDEQQMARFDECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 213
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+NI V+ K + ++LK N ++ +P+++++KA G+ SD E++Q+
Sbjct: 214 KKNIVQASVTSSTHERKSKTYVITKNDNIYLKHNSISEDIPIVIILKAAGITSDLEILQL 273
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G+DP+Y L + +FEE A+ ++TQ+QAL ++ +VK R+ +S +EG
Sbjct: 274 VCGQDPQYQDLFVVNFEEAAKLEIFTQQQALNYVGKRVKTIRRAGAPKLSQMQEG----- 328
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
++ + ++++ V FR K +Y A M RR++ + N +DD+DYVGNKRLEL+GQL
Sbjct: 329 IEAIATTIIAHLTVSDLQFREKALYIAAMARRVLMTMHNPKMVDDRDYVGNKRLELAGQL 388
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
+SLLFED FK + + DK+L KP +A+ FD + H + IT GL +STGN+
Sbjct: 389 MSLLFEDLFKKFNSDFKANIDKILKKPSRASEFDALLSINIHSNNITMGLNRAISTGNWS 448
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTP
Sbjct: 449 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTP 508
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+T+D+EE P+ LCY LG ED+ + L+ +F V NG +
Sbjct: 509 EGEACGLVKNLALMTHITSDDEELPIKKLCYVLGCEDILGIDSATLYADGNFGVCVNGTL 568
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPL-VIADNGIS 474
+G R P FV+ R LRR+GK+ F+S+Y N Q V++A+DGGR+CRPL +I + S
Sbjct: 569 IGCTRFPVKFVSDFRNLRRSGKVSAFISIYTNSHQKAVHIATDGGRICRPLIIIGEKNKS 628
Query: 475 RIKEYHMKELM 485
++ E+H+ +L+
Sbjct: 629 KVNEHHLAKLL 639
>M3JZW2_CANMA (tr|M3JZW2) DNA-directed RNA polymerase (Fragment) OS=Candida
maltosa Xu316 GN=G210_0860 PE=3 SV=1
Length = 1157
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 234/489 (47%), Positives = 327/489 (66%), Gaps = 10/489 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +C+L E ++A++ ECPLDPGGYFV+ G EKVIL+QEQLSKNRII+ D+
Sbjct: 150 MPVMLRSNKCMLEGMSEEQMARVEECPLDPGGYFVVNGTEKVILVQEQLSKNRIIVEADE 209
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+NI V+ K +K++LK N ++ +P+++++KA G+ SD E++Q+
Sbjct: 210 KKNIVQASVTSSTHERKSKTYVITKHDKIYLKHNSISEDIPIVIILKAAGITSDLEILQL 269
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G DP Y L + +FEE A+ V+TQ+QAL ++ +VK R+ +S +EG
Sbjct: 270 VCGTDPSYQDLFVVNFEEAAKLEVFTQQQALLYVGKRVKTIRRAGAPKLSQLQEG----- 324
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
++ + ++++ V FR K +Y A M RR++ A+ N +DD+DYVGNKRLEL+GQL
Sbjct: 325 IEAIATTIIAHLTVSDLQFREKALYIATMARRVVMAMHNPKMVDDRDYVGNKRLELAGQL 384
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
+SLLFED FK + + DK+L KP + + FD + H + IT GL +STGN+
Sbjct: 385 MSLLFEDLFKKFNSDFKANIDKVLKKPSRTSEFDALLSINIHSNNITMGLNRAISTGNWS 444
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTP
Sbjct: 445 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTP 504
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTD+EE P+ L LG E + L LH+ ++ V NG +
Sbjct: 505 EGEACGLVKNLALMTHITTDDEEPPIKKLSIALGCEPILALDSATLHSDGNYGVYLNGTL 564
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISR 475
+G R P+ FV R LRR GK+ F+S+Y N V++A+DGGR+CRPL+I +NG+ R
Sbjct: 565 IGTTRFPQKFVNDFRHLRRNGKVSAFISIYTNSHHQAVHIATDGGRICRPLIIVENGVPR 624
Query: 476 IKEYHMKEL 484
+ H+++L
Sbjct: 625 VTAEHLRKL 633
>N1QYX2_AEGTA (tr|N1QYX2) DNA-directed RNA polymerase III subunit RPC2
OS=Aegilops tauschii GN=F775_09692 PE=4 SV=1
Length = 1143
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/401 (59%), Positives = 293/401 (73%), Gaps = 15/401 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL KDEAELA+ GECPLDPGGYF++KG EKVILIQEQLSKNRIII D
Sbjct: 103 MPIMLRSYACVLNGKDEAELARYGECPLDPGGYFIVKGTEKVILIQEQLSKNRIIIDTDN 162
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ I M+KEK++L LN+F K +P++VVMKAMG+E+DQEVVQMV
Sbjct: 163 KGRVTASVTSSTHEVKSKTVICMDKEKIYLHLNQFTKPIPIIVVMKAMGIETDQEVVQMV 222
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
GRDPRY LL S +ECA +YTQ+QAL ++D KV + NI K+GR +L
Sbjct: 223 GRDPRYGDLLYLSIQECATERIYTQQQALQYMDDKVTYAGAGNI---KDGRSK---LILR 276
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDK-------DYVGNKRLELSG 233
+ F++++PV+ GNF+ KCIY AVM+RR++DAILN D DDK DYVGNKRLELSG
Sbjct: 277 DVFVAHVPVNNGNFQPKCIYTAVMLRRMLDAILNSDTFDDKASPELADDYVGNKRLELSG 336
Query: 234 QLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGN 293
QL+SLLFED FKTM + +K D +++ D S ++ + QD+IT GLE +STGN
Sbjct: 337 QLVSLLFEDLFKTMNTYAVDRMNKNSDMA-RSSPLDFSQLIMQ-QDVITSGLERAISTGN 394
Query: 294 FEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCD 353
++I+RF+M RKG++QVL RLS++ LG MTR++PQFEK+RK SGPRALQPSQWGMLCPCD
Sbjct: 395 WDIKRFKMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQPSQWGMLCPCD 454
Query: 354 TPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDME 394
TPEGEACGL KNLALMTHVTTD+EE PL +LC L D E
Sbjct: 455 TPEGEACGLTKNLALMTHVTTDQEEGPLRNLCCELQHTDHE 495
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/113 (68%), Positives = 93/113 (82%), Gaps = 4/113 (3%)
Query: 374 TDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHRRPRGFVTAMRKLR 433
TDE +A +C+ LGVED+ LSGEE+H P SFLV+FNGLILGKHR+P+ F MR R
Sbjct: 555 TDETDA----VCFSLGVEDLSLLSGEEIHAPGSFLVMFNGLILGKHRQPQRFANNMRTFR 610
Query: 434 RAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYHMKELMD 486
R+GKIGEFVSV+VNEKQ C+++ASDGGRVCRPL+IAD G SR+KE+HMKEL D
Sbjct: 611 RSGKIGEFVSVFVNEKQHCIHIASDGGRVCRPLIIADKGRSRVKEHHMKELRD 663
>A5E0Z1_LODEL (tr|A5E0Z1) DNA-directed RNA polymerase OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=LELG_03278 PE=3 SV=1
Length = 1157
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/490 (48%), Positives = 323/490 (65%), Gaps = 10/490 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +C+L DE ++A++ ECPLDPGGYFV+ G EKVIL+QEQLSKNRII+ D
Sbjct: 150 MPVMLRSNKCMLDGLDERQMAQVDECPLDPGGYFVVNGTEKVILVQEQLSKNRIIVEADD 209
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKE-KMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K K++LK N + VP+++V+KA G+ SD E++Q+
Sbjct: 210 KKGIVQASVTSSTHERKSKTYVITKNGKIYLKHNSIGEDVPIVIVLKAAGITSDLEILQL 269
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G +P Y L + +FEE A+ V+TQ+QAL +L +VK R+ +S +EG + A
Sbjct: 270 VCGSNPHYQDLFVVNFEEAARLEVFTQQQALLYLGKRVKTIRRAGAPKLSQLQEGIEAIA 329
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
++ +SN+ F+ K Y A+M RR++ A+ N +DD+DYVGNKRLEL+GQL
Sbjct: 330 TTIVAHLTVSNL-----QFKEKAFYMAMMARRVVMAMHNPKMVDDRDYVGNKRLELAGQL 384
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
+SLLFED FK + + DK+L KP + FD + H + IT GL +STGN+
Sbjct: 385 MSLLFEDLFKKFNSDFKANIDKILKKPSRTTEFDALLSINIHSNNITMGLNRAISTGNWS 444
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTP
Sbjct: 445 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTP 504
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTD+EE P+ LC LG E + L LH +F V NG +
Sbjct: 505 EGEACGLVKNLALMTHITTDDEELPIKKLCIALGCESILGLDSSTLHVDGNFGVFLNGTL 564
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISR 475
+G R P FV R LRRAGK+ F+S+Y N V+LA+DGGR+CRPL+I + S+
Sbjct: 565 IGATRFPVKFVNDFRHLRRAGKVSAFISIYTNTHHQAVHLATDGGRICRPLIIVEKNKSK 624
Query: 476 IKEYHMKELM 485
++ H+K+L+
Sbjct: 625 VQSEHLKKLL 634
>C4JMP0_UNCRE (tr|C4JMP0) DNA-directed RNA polymerase OS=Uncinocarpus reesii
(strain UAMH 1704) GN=UREG_04098 PE=3 SV=1
Length = 1202
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/487 (47%), Positives = 329/487 (67%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL +K E+ +L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 193 MPVMLRSSKCVLSKKSPGEMYQLHECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDP 252
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+++K++++L+ N + VP+++++KAMG++SD+E++ +
Sbjct: 253 KKEIVQASVTSSSNERKSKSYIILKKDRIYLRHNVLSDDVPIVIILKAMGIQSDKEMLLL 312
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSN-ISSEKEGRGSPALK 177
V G D Y +FEE + G+YTQ+QAL +L S +K N + A++
Sbjct: 313 VAGVDSVYQEDFAINFEESIKLGIYTQQQALEYLGSHIKIMRKPNSFGGVRRNYIQEAVE 372
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y A M RR++ A + +DD+DYVGNKRLEL+GQL++
Sbjct: 373 AIASVIISHVQVENMNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKRLELAGQLLA 432
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + FD SV+A H + IT G+ +STGN+ ++
Sbjct: 433 LLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAFSVVAIHGNHITQGMNRAISTGNWSLK 492
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEG
Sbjct: 493 RFRMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPADTPEG 552
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L Y LG ED++ + G E + ++++ NG +
Sbjct: 553 EACGLVKNLALMTHITTNDEEEPVRKLVYALGAEDVQAVGGREFYGQGAYIIFLNGSPIA 612
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ + R+LRR G++ EFVS+Y+N Q +++A+D GR+CRPL+I + SR+
Sbjct: 613 LTRRPKFFLNSFRRLRRMGRVSEFVSIYINHHQSAMHIATDDGRICRPLIIVEKQKSRVT 672
Query: 478 EYHMKEL 484
H+ +L
Sbjct: 673 ADHLSQL 679
>B0WCT6_CULQU (tr|B0WCT6) Putative uncharacterized protein OS=Culex
quinquefasciatus GN=CpipJ_CPIJ004871 PE=3 SV=1
Length = 928
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/484 (49%), Positives = 328/484 (67%), Gaps = 4/484 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K E EL+K+ ECPLDPGGYFVI+G EKVILIQEQ+S N+++ D
Sbjct: 135 MPIMLRSSNCVLSGKSEYELSKVNECPLDPGGYFVIRGTEKVILIQEQVSWNKML-TEDY 193
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
N I ++ + K +LK N +++P+ ++ KAMG+ SDQE++Q+V
Sbjct: 194 NNVIQCQVTSSTHEKKSRTILLSKHGKYYLKHNSMTEEIPVAIIFKAMGIASDQEIMQLV 253
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G D L PS E A + VYTQ++AL ++ SK+ F+ +++ + A +L
Sbjct: 254 GIDTETQKRLAPSLLEAANHKVYTQQRALEYMGSKLIAKRFTTAATKYKTTADEARDLLA 313
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV+ NF++K IY A+M+RR+M A L++ A+DD+DY GNKRLEL+G L+SL+F
Sbjct: 314 TTILAHVPVNNFNFQVKAIYVALMIRRVMAAELDRSAVDDRDYYGNKRLELAGSLLSLMF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +DK + K KA +FDI V LI+ GLE+ +STGN+ I+RF+
Sbjct: 374 EDLFKRFNWELKMIADKNIPKI-KAAQFDI--VKHMRAALISTGLETAISTGNWTIKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
MER G+TQVL RLS+I LG MTRV+ QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TT+ +E P+I L Y GVED+ L GE ++ P F+V NG ILG
Sbjct: 491 GLVKNLALMTHITTEVDEEPVIRLAYNSGVEDIRLLGGETINNPKVFMVFINGNILGVTI 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RR G IG FVS++ + Q CVY+ +DGGR+CRP +I NG +K+ H
Sbjct: 551 MYKRLVEVFRMMRRKGLIGSFVSIHTSFSQRCVYIHTDGGRLCRPYIIVQNGQPLVKQEH 610
Query: 481 MKEL 484
+++L
Sbjct: 611 IEQL 614
>A5DLE5_PICGU (tr|A5DLE5) DNA-directed RNA polymerase OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PGUG_04096 PE=3
SV=2
Length = 1156
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/491 (48%), Positives = 330/491 (67%), Gaps = 11/491 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+ML+S +C+L ++ ++AKL ECP+DPGGYF++ G EKVILIQEQLSKNRII+ D+
Sbjct: 149 MPIMLKSNKCILDGINDHQMAKLDECPIDPGGYFIVNGTEKVILIQEQLSKNRIIVEADE 208
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K EK++LK N + VP+++++KA G+ SD E++Q+
Sbjct: 209 KKGIVQASVTSSTHERKSKTYVITKNEKIYLKHNSIGEDVPIVIILKAAGITSDLEILQL 268
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G +P+Y L +FEE A+ V+TQ+QAL ++ +VK R+ +S +EG
Sbjct: 269 VCGSNPQYQDLFAVNFEEAARLEVFTQQQALNYVGKRVKTVRRAGAPKLSQLQEG----- 323
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
++ + +++I V FR K +Y A+M RR++ + N +DD+DYVGNKRLEL+GQL
Sbjct: 324 IEAIATTIIAHITVDDLQFREKALYIAMMARRVLMTMHNPKMVDDRDYVGNKRLELAGQL 383
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
+SLLFED FK + + DK+L KP +A+ FD + H + IT G+ +STGN+
Sbjct: 384 MSLLFEDLFKKFNSDFKANIDKILKKPSRASEFDALLSINIHSNNITMGMNRAISTGNWS 443
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTP
Sbjct: 444 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTSDTP 503
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTD+EE P+ S+C+ LG ED+ + LH +F + NG I
Sbjct: 504 EGEACGLVKNLALMTHITTDDEEEPIRSVCFALGCEDILEVDSATLHADGNFGIYLNGTI 563
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADN-GIS 474
+G R P FV R LRR+GK+ F+S++ N Q V +A+DGGRVCRPL+I D+ +
Sbjct: 564 IGTTRFPAQFVGNFRALRRSGKVSPFISIHTNTHQNAVQIATDGGRVCRPLIIVDSKNKA 623
Query: 475 RIKEYHMKELM 485
+K H+K+LM
Sbjct: 624 NVKAVHLKKLM 634
>A6R9I0_AJECN (tr|A6R9I0) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain NAm1 / WU24) GN=HCAG_06971 PE=3 SV=1
Length = 1186
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/477 (47%), Positives = 329/477 (68%), Gaps = 3/477 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K EAE+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 186 MPVMLRSSKCVLSNKSEAEMQLLQECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDL 245
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
++I I+++K++++++ N ++ VP+++++KAMG++SD+E++ +
Sbjct: 246 KKDIVQASVTSSSNERKSKSYIILKKDRIYMRHNVLSEDVPIVILLKAMGIQSDKEMLLL 305
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSN-ISSEKEGRGSPALK 177
V G D + +FEE + G+YTQ QAL ++ S++K + N + A++
Sbjct: 306 VAGIDSTFQEDFAINFEESVKLGIYTQHQALEYIGSRIKINRKPNSFGITRRNHVQEAIE 365
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y A M RR++ A + +DD+DYVGNKRLEL+GQL++
Sbjct: 366 AISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKRLELAGQLLA 425
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + +FD V+A H + IT G+ +STGN+ ++
Sbjct: 426 LLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRAISTGNWSLK 485
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEG
Sbjct: 486 RFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPSDTPEG 545
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G ELH ++++ NG +
Sbjct: 546 EACGLVKNLALMTHITTNDEEQPVRKLIFALGAEDVQTVGGRELHGQGAYIIFLNGSPIA 605
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGIS 474
RRP+ F+ + R+LRR G++ EF+SV++N Q V++A+D GR+CRPL+I ++G S
Sbjct: 606 LTRRPKFFLNSFRRLRRTGRVSEFISVFINHHQNAVHVATDDGRICRPLIIVEDGKS 662
>B9WLY1_CANDC (tr|B9WLY1) DNA-directed RNA polymerase OS=Candida dubliniensis
(strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 /
NRRL Y-17841) GN=CD36_30900 PE=3 SV=1
Length = 1157
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/491 (48%), Positives = 327/491 (66%), Gaps = 10/491 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +C+L EA +A++ ECPLDPGGYFV+ G EKVIL+QEQLSKNRII+ D+
Sbjct: 151 MPVMLRSNKCMLEGMSEATMAQVEECPLDPGGYFVVNGTEKVILVQEQLSKNRIIVEADE 210
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K +K++LK N ++ +P+++++KA G+ SD E++Q+
Sbjct: 211 KKGIVQASVTSSTHERKSKTYVITKNDKIYLKHNSISEDIPIVIILKAAGIVSDLEILQL 270
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G DP Y L + +FEE A+ V+TQ+QAL ++ +VK R+ +S +EG
Sbjct: 271 VCGSDPNYQDLFVVNFEEAARLEVFTQQQALYYVGKRVKTIRRAGAPKLSQLQEG----- 325
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
++ + ++++ V F+ K +Y A M RR++ A+ N +DD+DYVGNKRLEL+GQL
Sbjct: 326 IEAIATTIIAHLTVSDLQFKEKALYIATMARRVVMAMHNPKMVDDRDYVGNKRLELAGQL 385
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
+SLLFED FK + + DK+L KP + + FD + H + IT GL +STGN+
Sbjct: 386 MSLLFEDLFKKFNSDFKANIDKVLKKPSRTSEFDALLSINIHSNNITMGLNRAISTGNWS 445
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTP
Sbjct: 446 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTP 505
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTD+EEAP+ LC LG E + L LH +F V NG +
Sbjct: 506 EGEACGLVKNLALMTHITTDDEEAPVKKLCIVLGCEPIFALDSATLHVEGNFGVYLNGTL 565
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISR 475
+G R P FV R LRR GK+ F+S+Y N V++A+DGGR+CRPL+I +NG S+
Sbjct: 566 IGTTRFPVKFVHDFRHLRRNGKVSAFISIYTNTHHQAVHIATDGGRICRPLIIVENGKSK 625
Query: 476 IKEYHMKELMD 486
+ H+ +L++
Sbjct: 626 VTAEHLAKLIN 636
>G4T5Z4_PIRID (tr|G4T5Z4) DNA-directed RNA polymerase OS=Piriformospora indica
(strain DSM 11827) GN=PIIN_00462 PE=3 SV=1
Length = 1118
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/487 (48%), Positives = 325/487 (66%), Gaps = 5/487 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +CVL +E++LA + ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ +D
Sbjct: 142 IPIMLRSNKCVLAGANESQLAVMNECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVEIDS 201
Query: 61 NRNIXXXXXXXXXXXXXXXD--IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQ 118
++I + M K + LK N F++ +P+++ +KA+G++SD+E++
Sbjct: 202 AKSIISASVTSSTHSGLKSKTYVNMRKGLIVLKHNSFSEDIPIVIALKALGVQSDKEILL 261
Query: 119 M-VGRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALK 177
+ G Y P+ EE ++ GVYT +QA L ++V RSM + + L+
Sbjct: 262 LCAGNTESYQEAFSPNLEESSRAGVYTIQQAREWLGARV-RSMRRMVGPRRPN-WEEGLE 319
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
L L+++PV + K IY A M RR++ A + +DD+DYVGNKRLEL+GQL++
Sbjct: 320 CLVMIVLTHVPVVNMDLSAKAIYVATMTRRVLMAHEDPKLVDDRDYVGNKRLELAGQLLA 379
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK +++ + DK+L KP + + FD + + H + IT G +STGN+ ++
Sbjct: 380 LLFEDLFKAYVSELKKAFDKVLGKPARTSAFDPHTTMLLHGNPITQGFIRAISTGNWSLK 439
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP DTPEG
Sbjct: 440 RFRMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEG 499
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TTD EE PL+ + LGVED++ +G E++ P SF+V NGLI+G
Sbjct: 500 EACGLVKNLALMTHITTDVEEKPLVKIITLLGVEDIQLSTGSEIYGPTSFVVHLNGLIIG 559
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
R P FV RKLRRAG+I EFV +Y+N V +ASDGGR+CRPL+I + ++
Sbjct: 560 LTRFPSRFVAQFRKLRRAGRINEFVGIYINHHHKTVNIASDGGRICRPLIIVERMQPKVT 619
Query: 478 EYHMKEL 484
H++ L
Sbjct: 620 NEHIQML 626
>F0UQN3_AJEC8 (tr|F0UQN3) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain H88) GN=HCEG_07425 PE=3 SV=1
Length = 1227
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/487 (46%), Positives = 333/487 (68%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K EAE+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 218 MPVMLRSSKCVLSNKSEAEMQLLQECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDL 277
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+++K++++++ N ++ VP+++++KAMG++SD+E++ +
Sbjct: 278 KKEIVQASVTSSSNERKSKSYIILKKDRIYMRHNVLSEDVPIVILLKAMGIQSDKEMLLL 337
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSN-ISSEKEGRGSPALK 177
V G D + +FEE + G+ TQ QAL ++ S++K + N + A++
Sbjct: 338 VAGIDSTFQEDFAINFEESVKLGICTQHQALEYIGSRIKINRKPNSFGITRRNHVQEAIE 397
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y A M RR++ A + +DD+DYVGNKRLEL+GQL++
Sbjct: 398 AISSVIISHVVVENLNFRPKALYVAHMARRVLMAKHDPSLVDDRDYVGNKRLELAGQLLA 457
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + +FD V+A H + IT G+ +STGN+ ++
Sbjct: 458 LLFEDLFKKFQFDIKMNIDKVLKKPVRTEQFDAYGVVAIHGNHITQGMNRAISTGNWSLK 517
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG +TR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEG
Sbjct: 518 RFRMERAGVTHVLSRLSYIAALGMLTRISSQFEKTRKVSGPRALQPSQFGMLCPSDTPEG 577
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G ELH ++++ NG +
Sbjct: 578 EACGLVKNLALMTHITTNDEEEPVRKLIFALGAEDVQTVGGRELHGQGAYIIFLNGSPIA 637
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ + R+LRR G++ EF+SV++N Q V++A+D GR+CRPL+I ++G S++
Sbjct: 638 LTRRPKFFLNSFRRLRRTGRVSEFISVFINHHQNAVHVATDDGRICRPLIIVEDGKSKVT 697
Query: 478 EYHMKEL 484
H++ L
Sbjct: 698 NRHLRLL 704
>K9GPF6_PEND2 (tr|K9GPF6) DNA-directed RNA polymerase OS=Penicillium digitatum
(strain PHI26 / CECT 20796) GN=PDIG_28970 PE=3 SV=1
Length = 1208
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/488 (46%), Positives = 334/488 (68%), Gaps = 4/488 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +CVL K A+++ L ECPLDPGGYFV+ G EKVIL+QEQLSKNRII+ D
Sbjct: 203 IPIMLRSSKCVLSNKTPAQMSVLNECPLDPGGYFVVNGTEKVILVQEQLSKNRIIVETDP 262
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I IV +K ++++K N + +P+++++KAMG+ +D+E++QM
Sbjct: 263 KKEIVQASVTSSSNERKSKSYIVSKKGRLYVKHNVLNEDIPIVILLKAMGIHTDKEMMQM 322
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEE VYTQ+QAL + ++K + ++ ++ A++
Sbjct: 323 VTGDDSLYQDDFAINFEEAINVDVYTQQQALEWIGCRIK--INRKQAAYRKTHVQEAVEA 380
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +S+I V NFR K IY A M RR++ A + +DD+DY+GNKRLEL+GQ+++L
Sbjct: 381 IASVIISHIEVKDMNFRPKAIYVAHMARRVLMAKSDPALVDDRDYLGNKRLELAGQMLAL 440
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L+K ++A +FD +++ H + IT G+ +STGN+ ++R
Sbjct: 441 LFEDLFKKFCFDIKMNIDKVLNKRNRAEQFDAWTIVTMHGNHITQGMNRAISTGNWSLKR 500
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEGE
Sbjct: 501 FRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPADTPEGE 560
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT++EE P+ +L + LGVED+ + G++L+ ++ + NG G
Sbjct: 561 ACGLVKNLALMTHITTNDEEGPVRNLIFMLGVEDISSVGGQQLYARGAYTISINGTPTGL 620
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRP+ F+ A R+LRR G++ EFVS+Y+N Q V++A+D GR+CRPL++ +NG S +
Sbjct: 621 TRRPKSFLNAFRRLRRMGRVSEFVSIYINHHQRAVHVATDDGRICRPLIVVENGKSLVGV 680
Query: 479 YHMKELMD 486
H+++L D
Sbjct: 681 QHLEKLRD 688
>K9G905_PEND1 (tr|K9G905) DNA-directed RNA polymerase OS=Penicillium digitatum
(strain Pd1 / CECT 20795) GN=PDIP_63390 PE=3 SV=1
Length = 1208
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/488 (46%), Positives = 334/488 (68%), Gaps = 4/488 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +CVL K A+++ L ECPLDPGGYFV+ G EKVIL+QEQLSKNRII+ D
Sbjct: 203 IPIMLRSSKCVLSNKTPAQMSVLNECPLDPGGYFVVNGTEKVILVQEQLSKNRIIVETDP 262
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I IV +K ++++K N + +P+++++KAMG+ +D+E++QM
Sbjct: 263 KKEIVQASVTSSSNERKSKSYIVSKKGRLYVKHNVLNEDIPIVILLKAMGIHTDKEMMQM 322
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEE VYTQ+QAL + ++K + ++ ++ A++
Sbjct: 323 VTGDDSLYQDDFAINFEEAINVDVYTQQQALEWIGCRIK--INRKQAAYRKTHVQEAVEA 380
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +S+I V NFR K IY A M RR++ A + +DD+DY+GNKRLEL+GQ+++L
Sbjct: 381 IASVIISHIEVKDMNFRPKAIYVAHMARRVLMAKSDPALVDDRDYLGNKRLELAGQMLAL 440
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L+K ++A +FD +++ H + IT G+ +STGN+ ++R
Sbjct: 441 LFEDLFKKFCFDIKMNIDKVLNKRNRAEQFDAWTIVTMHGNHITQGMNRAISTGNWSLKR 500
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEGE
Sbjct: 501 FRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPADTPEGE 560
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT++EE P+ +L + LGVED+ + G++L+ ++ + NG G
Sbjct: 561 ACGLVKNLALMTHITTNDEEGPVRNLIFMLGVEDISSVGGQQLYARGAYTISINGTPTGL 620
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRP+ F+ A R+LRR G++ EFVS+Y+N Q V++A+D GR+CRPL++ +NG S +
Sbjct: 621 TRRPKSFLNAFRRLRRMGRVSEFVSIYINHHQRAVHVATDDGRICRPLIVVENGKSLVGV 680
Query: 479 YHMKELMD 486
H+++L D
Sbjct: 681 QHLEKLRD 688
>J3K8D2_COCIM (tr|J3K8D2) DNA-directed RNA polymerase OS=Coccidioides immitis
(strain RS) GN=CIMG_06286 PE=3 SV=1
Length = 1233
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/484 (46%), Positives = 329/484 (67%), Gaps = 3/484 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL +K E+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 224 MPVMLRSSKCVLSKKSPREMYLLHECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDP 283
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I ++++K++++L+ N + +P+++++KAMG++SD+E++ +
Sbjct: 284 KKEIVQASVTSSSNERKSKSYVILKKDRIYLRHNVLSDDIPVVILLKAMGIQSDKEMLLL 343
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSN-ISSEKEGRGSPALK 177
V G D Y +FEE + G+YTQ+QAL +L S +K + N + A++
Sbjct: 344 VAGVDSVYQEDFAINFEESIKLGIYTQQQALEYLGSHIKITRKPNGFGGGRRNYIQEAVE 403
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y A M RR++ A + +DD+DYVGNKRLEL+GQL++
Sbjct: 404 AIASVIISHVQVENMNFRPKALYVAHMARRVLMAKHDSSLVDDRDYVGNKRLELAGQLLA 463
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + FD SV+A H + IT G+ +STGN+ ++
Sbjct: 464 LLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAFSVVAIHGNHITQGMNRAISTGNWSLK 523
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEG
Sbjct: 524 RFRMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPSDTPEG 583
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G E + ++++ NG +
Sbjct: 584 EACGLVKNLALMTHITTNDEEEPVRKLVFALGAEDVQAVGGREFYGQGAYIIFLNGSPIA 643
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ + R+LRR G++ EFVSVY+N Q V++A+D GR+CRPL+I +N S++
Sbjct: 644 LTRRPKHFLNSFRRLRRMGRVSEFVSVYINHHQSAVHIATDDGRICRPLIIVENQKSKVT 703
Query: 478 EYHM 481
+ H+
Sbjct: 704 DLHL 707
>L8FPN3_GEOD2 (tr|L8FPN3) DNA-directed RNA polymerase OS=Geomyces destructans
(strain ATCC MYA-4855 / 20631-21) GN=GMDG_00002 PE=3
SV=1
Length = 1187
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/488 (44%), Positives = 327/488 (67%), Gaps = 2/488 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+ML+S +C L +++ +LA + EC LDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 209 MPIMLKSSKCRLTSRNDGQLAYMNECALDPGGYFIVNGTEKVILVQEQLSKNRVIVETDA 268
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+++ +VM+KE+++L+ N + VP+++ +KAM ++SD E++ +
Sbjct: 269 KKSMVSASVTSSTHERKSKSYVVMKKERIYLQHNVLTEAVPIVIALKAMAVQSDHEMLLL 328
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEE A+ G+++Q+QAL + +VK ++ L+
Sbjct: 329 VAGTDATYQDDFAVNFEEAAKLGIFSQQQALEWIGGRVKMGKSRFGQPQRRNFAQDGLEA 388
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
L ++++PV +FR K +Y M+RR++ A+ + +DD+DYVGNKRLEL+GQL+SL
Sbjct: 389 LANIVITHVPVVGLDFRPKALYVCFMVRRVLMAMHDPKLVDDRDYVGNKRLELAGQLLSL 448
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L KP++ N FD + H + IT G+ +STGN+ ++R
Sbjct: 449 LFEDLFKKFNSDLKMNIDKVLKKPNRTNEFDAYQHMQSHGNYITQGMNRAISTGNWSLKR 508
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEGE
Sbjct: 509 FKMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPSDTPEGE 568
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT+++E P+ L + LG ED+ +SG+E++ ++++ NG L
Sbjct: 569 ACGLVKNLALMTHITTNDDEEPVRKLVFVLGAEDIVSMSGKEIYDDGAYVIFINGTPLAL 628
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R+P+ F+ + RR G++ EFVS Y+N V++A+D GR+CRPL+I NG+ RIK+
Sbjct: 629 TRKPKAFLAGFKTFRRTGRVSEFVSCYINHHTSSVHIATDEGRICRPLIIVTNGVPRIKD 688
Query: 479 YHMKELMD 486
+H+ L D
Sbjct: 689 HHLAALRD 696
>Q59M52_CANAL (tr|Q59M52) DNA-directed RNA polymerase OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=COP1 PE=3 SV=1
Length = 1157
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/491 (48%), Positives = 326/491 (66%), Gaps = 10/491 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +C+L EA +A++ ECPLDPGGYFV+ G EKVIL+QEQLSKNRII+ D+
Sbjct: 151 MPVMLRSNKCMLEGMSEATMAQVEECPLDPGGYFVVNGTEKVILVQEQLSKNRIIVEADE 210
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K +K++LK N ++ +P+++++KA G+ SD E++Q+
Sbjct: 211 KKGIVQASVTSSTHERKSKTYVITKNDKIYLKHNSISEDIPIVIILKAAGIVSDLEILQL 270
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G D Y L + +FEE A+ V+TQ+QAL ++ +VK R+ +S +EG
Sbjct: 271 VCGSDSNYQDLFVVNFEEAARLEVFTQQQALYYVGKRVKTIRRAGAPKLSQLQEG----- 325
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
++ + ++++ V FR K +Y A M RR++ A+ N +DD+DYVGNKRLEL+GQL
Sbjct: 326 IEAIATTIIAHLTVSDLQFREKALYIATMARRVVMAMHNPKMVDDRDYVGNKRLELAGQL 385
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
+SLLFED FK + + DK+L KP + + FD + H + IT GL +STGN+
Sbjct: 386 MSLLFEDLFKKFNSDFKANIDKVLKKPSRTSEFDALLSINIHSNNITMGLNRAISTGNWS 445
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTP
Sbjct: 446 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTP 505
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTD+EEAP+ LC LG E + L LH +F V NG +
Sbjct: 506 EGEACGLVKNLALMTHITTDDEEAPVKKLCIALGCEPIFALDSATLHVDGNFGVYLNGTL 565
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISR 475
+G R P FV R LRR GK+ F+S+Y N V++A+DGGR+CRPL+I +NG S+
Sbjct: 566 IGTTRFPVKFVHDFRHLRRVGKVSAFISIYTNTHHQAVHIATDGGRICRPLIIVENGKSK 625
Query: 476 IKEYHMKELMD 486
+ H+ +L++
Sbjct: 626 VTAEHLAKLIN 636
>C4YM03_CANAW (tr|C4YM03) DNA-directed RNA polymerase OS=Candida albicans (strain
WO-1) GN=CAWG_01878 PE=3 SV=1
Length = 1157
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/491 (48%), Positives = 326/491 (66%), Gaps = 10/491 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +C+L EA +A++ ECPLDPGGYFV+ G EKVIL+QEQLSKNRII+ D+
Sbjct: 151 MPVMLRSNKCMLEGMSEATMAQVEECPLDPGGYFVVNGTEKVILVQEQLSKNRIIVEADE 210
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K +K++LK N ++ +P+++++KA G+ SD E++Q+
Sbjct: 211 KKGIVQASVTSSTHERKSKTYVITKNDKIYLKHNSISEDIPIVIILKAAGIVSDLEILQL 270
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G D Y L + +FEE A+ V+TQ+QAL ++ +VK R+ +S +EG
Sbjct: 271 VCGSDSNYQDLFVVNFEEAARLEVFTQQQALYYVGKRVKTIRRAGAPKLSQLQEG----- 325
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
++ + ++++ V FR K +Y A M RR++ A+ N +DD+DYVGNKRLEL+GQL
Sbjct: 326 IEAIATTIIAHLTVSDLQFREKALYIATMARRVVMAMHNPKMVDDRDYVGNKRLELAGQL 385
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
+SLLFED FK + + DK+L KP + + FD + H + IT GL +STGN+
Sbjct: 386 MSLLFEDLFKKFNSDFKANIDKVLKKPSRTSEFDALLSINIHSNNITMGLNRAISTGNWS 445
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTP
Sbjct: 446 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTADTP 505
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTD+EEAP+ LC LG E + L LH +F V NG +
Sbjct: 506 EGEACGLVKNLALMTHITTDDEEAPVKKLCIALGCEPIFALDSATLHVDGNFGVYLNGTL 565
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISR 475
+G R P FV R LRR GK+ F+S+Y N V++A+DGGR+CRPL+I +NG S+
Sbjct: 566 IGTTRFPVKFVHDFRHLRRVGKVSAFISIYTNTHHQAVHIATDGGRICRPLIIVENGKSK 625
Query: 476 IKEYHMKELMD 486
+ H+ +L++
Sbjct: 626 VTAEHLAKLIN 636
>E9CT81_COCPS (tr|E9CT81) DNA-directed RNA polymerase OS=Coccidioides posadasii
(strain RMSCC 757 / Silveira) GN=CPSG_00790 PE=3 SV=1
Length = 1197
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/484 (46%), Positives = 329/484 (67%), Gaps = 3/484 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL +K E+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 188 MPVMLRSSKCVLSKKSPREMYLLHECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDP 247
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I ++++K++++L+ N + +P+++++KAMG++SD+E++ +
Sbjct: 248 KKEIVQASVTSSSNERKSKSYVILKKDRIYLRHNVLSDDIPVVILLKAMGIQSDKEMLLL 307
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSN-ISSEKEGRGSPALK 177
V G D Y +FEE + G+YTQ+QAL +L S +K + N + A++
Sbjct: 308 VAGVDSVYQEDFAINFEESIKLGIYTQQQALEYLGSHIKITRKPNGFGGGRRNYIQEAVE 367
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y A M RR++ A + +DD+DYVGNKRLEL+GQL++
Sbjct: 368 AIASVIISHVQVENMNFRPKALYVAHMARRVLMAKHDSSLVDDRDYVGNKRLELAGQLLA 427
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + FD SV+A H + IT G+ +STGN+ ++
Sbjct: 428 LLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAFSVVAIHGNHITQGMNRAISTGNWSLK 487
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEG
Sbjct: 488 RFRMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPSDTPEG 547
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G E + ++++ NG +
Sbjct: 548 EACGLVKNLALMTHITTNDEEEPVRKLVFALGAEDVQAVGGREFYGQGAYIIFLNGSPIA 607
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ + R+LRR G++ EFVSVY+N Q V++A+D GR+CRPL+I +N S++
Sbjct: 608 LTRRPKHFLNSFRRLRRMGRVSEFVSVYINHHQSAVHIATDDGRICRPLIIVENQKSKVT 667
Query: 478 EYHM 481
+ H+
Sbjct: 668 DLHL 671
>C5P7S9_COCP7 (tr|C5P7S9) DNA-directed RNA polymerase OS=Coccidioides posadasii
(strain C735) GN=CPC735_028150 PE=3 SV=1
Length = 1197
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/484 (46%), Positives = 329/484 (67%), Gaps = 3/484 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL +K E+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 188 MPVMLRSSKCVLSKKSPREMYLLHECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDP 247
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I ++++K++++L+ N + +P+++++KAMG++SD+E++ +
Sbjct: 248 KKEIVQASVTSSSNERKSKSYVILKKDRIYLRHNVLSDDIPVVILLKAMGIQSDKEMLLL 307
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSN-ISSEKEGRGSPALK 177
V G D Y +FEE + G+YTQ+QAL +L S +K + N + A++
Sbjct: 308 VAGVDSVYQEDFAINFEESIKLGIYTQQQALEYLGSHIKITRKPNGFGGGRRNYIQEAVE 367
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y A M RR++ A + +DD+DYVGNKRLEL+GQL++
Sbjct: 368 AIASVIISHVQVENMNFRPKALYVAHMARRVLMAKHDSSLVDDRDYVGNKRLELAGQLLA 427
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + FD SV+A H + IT G+ +STGN+ ++
Sbjct: 428 LLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAFSVVAIHGNHITQGMNRAISTGNWSLK 487
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEG
Sbjct: 488 RFRMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPSDTPEG 547
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G E + ++++ NG +
Sbjct: 548 EACGLVKNLALMTHITTNDEEEPVRKLVFALGAEDVQAVGGREFYGQGAYIIFLNGSPIA 607
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ + R+LRR G++ EFVSVY+N Q V++A+D GR+CRPL+I +N S++
Sbjct: 608 LTRRPKHFLNSFRRLRRMGRVSEFVSVYINHHQSAVHIATDDGRICRPLIIVENQKSKVT 667
Query: 478 EYHM 481
+ H+
Sbjct: 668 DLHL 671
>B6HTA4_PENCW (tr|B6HTA4) DNA-directed RNA polymerase OS=Penicillium chrysogenum
(strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255)
GN=Pc22g21780 PE=3 SV=1
Length = 1208
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/488 (46%), Positives = 335/488 (68%), Gaps = 4/488 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +CVL K A+++ L ECPLDPGGYFV+ G EKVIL+QEQLSKNRII+ D
Sbjct: 203 IPMMLRSSKCVLSNKTPAQMSVLNECPLDPGGYFVVNGTEKVILVQEQLSKNRIIVETDP 262
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
++I IV +K ++++K N + +P+++++KAMG+ +D+E++QM
Sbjct: 263 KKDIVQASVTSSSNERKSKSYIVSKKGRLYVKHNVLNEDIPIVILLKAMGIHTDKEMMQM 322
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEE VYTQ+QAL + ++K + ++ ++ A++
Sbjct: 323 VTGDDALYQDDFAINFEEAINVDVYTQQQALDWIGCRIK--INRKQAAYRKTHVQEAVEA 380
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +S+I V NFR K IY A M RR++ A + +DD+DY+GNKRLEL+GQ+++L
Sbjct: 381 IASVIISHIEVKDMNFRPKAIYVAHMARRVLMAKSDPALVDDRDYLGNKRLELAGQMLAL 440
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + DK+L+K ++A +FD +++ H + IT G+ +STGN+ ++R
Sbjct: 441 LFEDLFKKFCFDIKMNIDKVLNKRNRAEQFDAWTIVTMHGNHITQGMNRAISTGNWSLKR 500
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEGE
Sbjct: 501 FRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPADTPEGE 560
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT++EE P+ +L + LGVED+ + G++L+ ++ + NG G
Sbjct: 561 ACGLVKNLALMTHITTNDEEGPVRNLIFMLGVEDISSVGGQQLYARGAYTISINGTPTGL 620
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRP+ F+ A R+LRR G++ EFVS+Y+N Q V++A+D GR+CRPL++ +NG S +
Sbjct: 621 TRRPKSFLNAFRRLRRMGRVSEFVSIYINHHQRAVHVATDDGRICRPLIVVENGKSLVGA 680
Query: 479 YHMKELMD 486
H+++L D
Sbjct: 681 QHLEKLRD 688
>H6BS90_EXODN (tr|H6BS90) DNA-directed RNA polymerase OS=Exophiala dermatitidis
(strain ATCC 34100 / CBS 525.76 / NIH/UT8656)
GN=HMPREF1120_02320 PE=3 SV=1
Length = 1225
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/487 (46%), Positives = 329/487 (67%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS RCVL K EAE+ + ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D
Sbjct: 209 LPIMLRSSRCVLANKSEAEMCAMDECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADP 268
Query: 61 NRN-IXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I IV++K+ ++++ N + VP+ V++KAMG+ SD +++ +
Sbjct: 269 KKELITASVTSSTHARKSKSYIVLKKDMLYMRHNILNEDVPICVLLKAMGVTSDMDMMAI 328
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRS-MFSNISSEKEGRGSPALK 177
V G D +FEE + G++TQ+QAL +L +++K + + + AL+
Sbjct: 329 VAGTDSTLQDDFAINFEETIKLGIHTQQQALDYLGARIKITRKPTPFGQSRRNYVQEALE 388
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ F++++P+ NFR K IY A M RR++ A N +DD+DYVGNKRLEL+GQL+S
Sbjct: 389 AVSNVFIAHVPIENLNFRPKAIYVAHMARRVLMAKQNPALVDDRDYVGNKRLELAGQLLS 448
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP++ D +V+ H + IT G+ ++TGN+ ++
Sbjct: 449 LLFEDLFKKYNYDIKMNMDKVLRKPNRTEMADPCTVMMGHANHITQGMNRAIATGNWNLK 508
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRM+R G+T +L RLSFI LG MTR+S QFEK+RKVSGPRALQPS +GMLCP DTPEG
Sbjct: 509 RFRMDRAGVTHLLSRLSFIASLGMMTRISSQFEKTRKVSGPRALQPSSFGMLCPADTPEG 568
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TTD+EEAP+ L + LG ED+ + G EL+ P S+LV+ NG +
Sbjct: 569 EACGLVKNLALMTHITTDDEEAPIKRLIFMLGAEDIVTVGGTELYAPGSYLVLLNGTPVA 628
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
R+P F+T+ R+LRR+G++ EFVS ++N + +A+D GR+CRPL+I ++ S++
Sbjct: 629 TTRQPSHFLTSFRRLRRSGRVSEFVSTFINHHHRTINVATDEGRICRPLIIVEDKKSKVT 688
Query: 478 EYHMKEL 484
+ ++K L
Sbjct: 689 KRYLKSL 695
>B7FVD4_PHATC (tr|B7FVD4) DNA-directed RNA polymerase OS=Phaeodactylum
tricornutum (strain CCAP 1055/1) GN=RNAP-II_2 PE=3 SV=1
Length = 1211
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/496 (48%), Positives = 338/496 (68%), Gaps = 20/496 (4%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L ++ E +LA + ECP DPGGYFVIKG EKVILIQEQLSKNR+I+ D
Sbjct: 179 MPIMLRSKKCLLRDRSEDDLAGMKECPYDPGGYFVIKGVEKVILIQEQLSKNRVILEED- 237
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
N+ I I+++ +++LK N +P+ VV+KAMG+ESD E+VQ+V
Sbjct: 238 NKGIMASITSSTHERKSKAYILIKNGRVYLKNNTLGDDIPVAVVLKAMGIESDLELVQLV 297
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMF---------SNISSEKEGR 171
G + L S EE ++ G++TQ QAL + +K++ N+S E E R
Sbjct: 298 GSESPIINALALSLEEPSRLGIHTQAQALRFIGAKIRGRSGPSGPSSSYRKNVSPEDEAR 357
Query: 172 GSPALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLEL 231
+VL LS++PV +FR K +Y ++RR++ L K +DDKDY GNKRLEL
Sbjct: 358 -----EVLANVVLSHVPVTHFDFREKALYIGHIVRRVLLVHLGKMPLDDKDYYGNKRLEL 412
Query: 232 SGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLST 291
+G L+SLLFED FK + ++ +D +L KP++ FD+ + D IT+G+ + ++T
Sbjct: 413 AGNLLSLLFEDLFKIFNKDLKRQADLVLSKPNRTQAFDVVKTI--RPDTITNGMINAIAT 470
Query: 292 GNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCP 351
GN+ ++RFRM+R G+TQVL RLS++ LG MTR++ QFEK+RKVSGPR+LQPSQWGMLCP
Sbjct: 471 GNWVLKRFRMDRAGVTQVLSRLSYMSALGMMTRINSQFEKTRKVSGPRSLQPSQWGMLCP 530
Query: 352 CDTPEGEACGLVKNLALMTHVTTDEEEA-PLISLCYYLGVEDMEYLSGEELHTPDSFLVI 410
DTPEGEACGLVKNLAL+ H+TTDE + P+ +C LGVED++ ++G E+++ +FLV
Sbjct: 531 ADTPEGEACGLVKNLALLGHITTDEADTRPIERICRDLGVEDVKRMTGHEINSHQAFLVF 590
Query: 411 FNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIAD 470
NGLILG H RPR V +RK+RR G GEFVSVY++++Q V++A+DGGRVCRPL+I D
Sbjct: 591 LNGLILGVHTRPRELVRNLRKMRRRGLAGEFVSVYLHDEQCAVHIATDGGRVCRPLLIVD 650
Query: 471 --NGISRIKEYHMKEL 484
G+ ++++ HM+ L
Sbjct: 651 EETGLPKLQQIHMESL 666
>B8MJE1_TALSN (tr|B8MJE1) DNA-directed RNA polymerase OS=Talaromyces stipitatus
(strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006)
GN=TSTA_045960 PE=3 SV=1
Length = 1212
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/488 (47%), Positives = 330/488 (67%), Gaps = 4/488 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +CVL K EL L ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D
Sbjct: 205 MPIMLRSSKCVLSNKKPNELHLLNECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVETDP 264
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+++K++++L+ N ++ VPL++V+KAMG+ SD+E++ +
Sbjct: 265 KKEIVQASVTSSSNERKSKSYIILKKDRLYLRHNVLSEDVPLVIVLKAMGVHSDKEMMLL 324
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKV 178
V G D Y +FEE + V+TQ+QAL + SK+K + + K+ A++
Sbjct: 325 VAGIDDVYQEDFAINFEEAIKQNVFTQQQALDWIGSKIKINR-GKVGGYKKTHIEEAIEA 383
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
+ +S++ V +FR K IY A M RR++ A + +DD+DYVGNKRLEL+GQL++L
Sbjct: 384 ISSVVISHVEVTNMDFRPKAIYVANMARRVLMAKHDPSMVDDRDYVGNKRLELAGQLLAL 443
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK ++ + K+L K + FD SV+A H + ITHG+ +STGN+ ++R
Sbjct: 444 LFEDLFKKFCFDIKMNITKVLGK-RRREIFDAMSVVALHGNHITHGMNRAISTGNWSLKR 502
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLCP DTPEGE
Sbjct: 503 FRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCPSDTPEGE 562
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
ACGLVKNLALMTH+TT++EE P+ L + LG ED+ LSG+E++ ++++ NG +
Sbjct: 563 ACGLVKNLALMTHITTNDEEGPVSKLVFMLGAEDITTLSGKEIYGLGAYIISMNGTPIAM 622
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
RRP+ F+ + R+LRR G++ EFVS+Y+N Q V++A+D GR+CRPL++ +NG +
Sbjct: 623 TRRPKHFLNSFRRLRRMGRVSEFVSIYINHHQRAVHIATDDGRICRPLIVVENGKPLVNS 682
Query: 479 YHMKELMD 486
H+ +L D
Sbjct: 683 RHLGKLRD 690
>E9GN85_DAPPU (tr|E9GN85) DNA-directed RNA polymerase OS=Daphnia pulex
GN=DAPPUDRAFT_305037 PE=3 SV=1
Length = 1134
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/486 (48%), Positives = 322/486 (66%), Gaps = 5/486 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS C L AE+AK ECP D GGYF+++GNEKVILIQEQ+SKNR+I+ D+
Sbjct: 135 MPIMLRSSNCTLAGISPAEMAKKNECPYDCGGYFIVRGNEKVILIQEQMSKNRMIVEQDR 194
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
N+ ++V+ K K +LK N F +P+ +V KAMG+ SDQE+VQM+
Sbjct: 195 KGNMSCQVTSSTHGTKTRTNVVVNKGKYYLKQNSFQDDIPVAIVFKAMGIVSDQEIVQMI 254
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G D R PS EEC + ++TQ+QAL HL +K+++ F K+ A + L
Sbjct: 255 GTDDRVMTSFAPSLEECVRASIFTQQQALGHLGNKLRQKRF--FGGPKKTATEEARETLA 312
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV NF+ K +Y A+M+RR++ A + ++DD+DY GNKRLEL+G L+SLLF
Sbjct: 313 TTILAHVPVENFNFKAKAMYLALMIRRVIQAENDPTSVDDRDYYGNKRLELAGSLLSLLF 372
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK M +++ +DK + K KA +FD+ + D IT+GLE+ +STGN+ I+RFR
Sbjct: 373 EDLFKRMNFELKQIADKNIPKI-KAAQFDVIKHI--RTDHITNGLENAISTGNWTIKRFR 429
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R+G+TQ+L RLS+I LG MTRV+ QFEK+RKVSGPR+LQPSQWGMLCP DTPEGE C
Sbjct: 430 MDRQGVTQMLCRLSYISGLGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEGC 489
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TT+ EE P+ + +GVED+ SGEE+ P + V NG ILG +
Sbjct: 490 GLVKNLALMTHITTEAEEEPISRIAQNMGVEDINLFSGEEISDPSIYTVFLNGNILGLVK 549
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ + RR G I FVS+Y + + VY++SDGGR+CRP +I G + + + H
Sbjct: 550 DYLRLIRYFKLARRHGFINAFVSIYPHFQTRSVYISSDGGRLCRPYIIVRKGKAALTDKH 609
Query: 481 MKELMD 486
M+EL D
Sbjct: 610 MQELAD 615
>G3AHH8_SPAPN (tr|G3AHH8) DNA-directed RNA polymerase OS=Spathaspora passalidarum
(strain NRRL Y-27907 / 11-Y1) GN=SPAPADRAFT_70306 PE=3
SV=1
Length = 1155
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/489 (47%), Positives = 325/489 (66%), Gaps = 10/489 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS +C+L D+ +A+ ECPLDPGGYF++ G EKVIL+QEQLSKNRII+ D+
Sbjct: 150 MPIMLRSNKCILDGADDNTMARYDECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADE 209
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEK-EKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I V+ K +K++LK N ++ +P+++++KA G+ SD E++Q+
Sbjct: 210 KKGIVQASVTSSTHERKSKTYVITKNDKIYLKHNSISEDIPIVIILKAAGITSDLEILQL 269
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK---RSMFSNISSEKEGRGSPA 175
V G DP Y L + +FEE A+ V+TQ+QAL ++ +VK R+ +S +EG
Sbjct: 270 VCGSDPNYQDLFVVNFEEAARLEVFTQQQALNYVGKRVKTIRRAGAPKLSQLQEG----- 324
Query: 176 LKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQL 235
++ + ++++ V F+ K +Y A M RR++ + N +DD+DYVGNKRLEL+GQL
Sbjct: 325 IEAIATTIIAHLTVSDLQFKEKALYIATMARRVIMTMHNPTMVDDRDYVGNKRLELAGQL 384
Query: 236 ISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFE 295
+SLLFED FK + + DK+L KP + + FD + H + IT GL +STGN+
Sbjct: 385 MSLLFEDLFKKFNSDFKANIDKVLKKPSRTSEFDALLSINIHSNNITMGLNRAISTGNWS 444
Query: 296 IRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 355
++RF+MER G+T VL RLS+I LG MTR+S QFEKSRKVSGPRALQPSQ+GMLC DTP
Sbjct: 445 LKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFGMLCTSDTP 504
Query: 356 EGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLI 415
EGEACGLVKNLALMTH+TTD+EE P+ LCY LG E + + LH +F + NG +
Sbjct: 505 EGEACGLVKNLALMTHITTDDEELPIKKLCYMLGCEPILGVDSATLHDEGNFGIHVNGTL 564
Query: 416 LGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISR 475
+G R P FV RKLRR GK+ F+S++ N Q V++A+DGGR+CRPL+I +NG S+
Sbjct: 565 VGTTRFPGKFVENFRKLRRTGKVSAFISIHTNTHQQAVHIATDGGRICRPLIIVENGKSK 624
Query: 476 IKEYHMKEL 484
+ H+ +L
Sbjct: 625 VTAEHLLKL 633
>F2UFB8_SALS5 (tr|F2UFB8) DNA-directed RNA polymerase OS=Salpingoeca sp. (strain
ATCC 50818) GN=PTSG_06968 PE=3 SV=1
Length = 1139
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/486 (48%), Positives = 324/486 (66%), Gaps = 8/486 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +C L++ ++ ++AK+GECPLDPGGYF+I G EKVIL+QEQLSKNRII+ D+
Sbjct: 148 LPIMLRSKKCRLFKANDEQMAKMGECPLDPGGYFIIGGTEKVILMQEQLSKNRIIVERDR 207
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ + I M++ LK+N A+ VPL+VV+KAMGM SDQE++Q +
Sbjct: 208 HGEMSASVTSSSAERKTKTIINMKRGNFMLKVNMLAEDVPLVVVLKAMGMTSDQEILQFI 267
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK--RSMFSNISSEKEGRGSPALKV 178
G D + L PS ++CA+ V+TQ+QAL +L +KV+ R + KE A +
Sbjct: 268 GADEQSMELFGPSLQQCAELEVFTQDQALRYLGTKVRIPRREYGPSRRTKEDE---ARSI 324
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
L LS+I V + R KCIY VM RR++ AI NK DD+DY GNKRLEL+G L++L
Sbjct: 325 LASVVLSHIEVRNFDMRPKCIYLCVMARRMIAAIRNKSGGDDRDYYGNKRLELAGSLMAL 384
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FKT+ +++ D + A FD + ++ + IT + +S+GN+ ++R
Sbjct: 385 LFEDSFKTLNGRIKRELDHTFVRV-TARAFDPAQII--RANPITQAINYAISSGNWNLKR 441
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
FRMER G+T VL RLSFI LG MTR++ QFEK+RKVSGPR+LQPSQWGMLCP DTPEGE
Sbjct: 442 FRMERAGVTSVLSRLSFIAALGMMTRITSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGE 501
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
CGLVKNLALM++VT D +EAPLI L Y LGVE + ++GEE D+++V NG +LG
Sbjct: 502 TCGLVKNLALMSYVTVDVDEAPLIRLAYNLGVEGLNLVNGEEFSHEDTYVVFVNGTMLGV 561
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
R P V A+R LRRAG+I EFVS Y++ V++ASD GRVCRP +I ++G +
Sbjct: 562 TRSPHHLVRAVRLLRRAGRINEFVSAYISASTRTVHIASDAGRVCRPYIIVEHGQPLVTP 621
Query: 479 YHMKEL 484
+++L
Sbjct: 622 QQLRDL 627
>D8QFI5_SCHCM (tr|D8QFI5) DNA-directed RNA polymerase OS=Schizophyllum commune
(strain H4-8 / FGSC 9210) GN=SCHCODRAFT_83253 PE=3 SV=1
Length = 1142
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/491 (47%), Positives = 326/491 (66%), Gaps = 13/491 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS +CVL + EA+LA++ ECPLDPGGYFV+KG EKVIL+QEQLSKNRII+ D
Sbjct: 143 LPIMLRSNKCVLTGRTEAQLARMTECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVETDP 202
Query: 61 NRNIXXXXXXXXXXXXXXXD--IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQ 118
+ I +V +K +++L+ N + VP+++ +K +G++SD+E++
Sbjct: 203 VKGIVQASCTSSTHGGVKSKAYVVTKKGRIYLRHNSIHEDVPIVIALKGLGIQSDKEIML 262
Query: 119 MV-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALK 177
+ G Y + + E+ A+ GV+TQ+QAL L ++V+ ++ G PA +
Sbjct: 263 LTAGNTEAYKIAFSANLEDAAKMGVFTQQQALEWLGARVR------VNRRPMGPRRPAYE 316
Query: 178 VLEEEFLSNIPVH---QG-NFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSG 233
E + + H G +FR K I+ A M RR++ A+ ++ +DD+DYVGNKRLEL+G
Sbjct: 317 EALEALATLLLAHVRMDGLDFRPKAIFVATMTRRVLMAMHDEKMVDDRDYVGNKRLELAG 376
Query: 234 QLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGN 293
QL++LLFED FKT ++ + DK+L KP + FD + + D IT G +STGN
Sbjct: 377 QLLALLFEDLFKTYCSNLKAAIDKVLKKPSRTTEFDAYNTMMFQGDHITAGFVRAISTGN 436
Query: 294 FEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCD 353
+ ++RFRMER G+T VL RLSFI LG MTR+S QFEK+RKVSGPRALQPSQWGMLCP D
Sbjct: 437 WSLKRFRMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGPRALQPSQWGMLCPSD 496
Query: 354 TPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNG 413
TPEGEACGLVKNLALMTH+TTD +E P+I L Y LGVED+ SG E++ +F+V NG
Sbjct: 497 TPEGEACGLVKNLALMTHITTDVDEEPIIRLAYLLGVEDIALASGSEIYGTHAFIVSVNG 556
Query: 414 LILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGI 473
I+G + P FVT RK+RRA +I EFVS+Y+N V +A+DGGR+CRP++I + G
Sbjct: 557 NIIGLTKYPARFVTNFRKMRRARRISEFVSIYINHHHRTVQIATDGGRICRPMIIVEKGR 616
Query: 474 SRIKEYHMKEL 484
SR+ H+ L
Sbjct: 617 SRVHSEHIALL 627
>R7QMZ9_CHOCR (tr|R7QMZ9) DNA-directed RNA polymerase (Fragment) OS=Chondrus
crispus GN=CHC_T00008967001 PE=4 SV=1
Length = 1171
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/487 (49%), Positives = 319/487 (65%), Gaps = 12/487 (2%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRS C+L K + ELA +GECPLDPGGYFV++G EKVILIQEQLSKNRIII D+
Sbjct: 166 IPIMLRSGNCILSNKSDKELADVGECPLDPGGYFVVRGTEKVILIQEQLSKNRIIIENDQ 225
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
R I ++++ K++L N V + +V++AMG+E+DQE+VQ++
Sbjct: 226 -RGITANVQSSTHERKSRTTLIVKHGKIYLHHNTLEADVNIAIVLRAMGVETDQEIVQLI 284
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G DPRY + P+ ECAQ G+ T QAL + K K G P +
Sbjct: 285 GTDPRYVDGMAPTLHECAQEGINTSTQALLFIGKKAKTFRGPAFG------GRPGPRPSA 338
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV +F KC++ A M+RRI+ A+ + +DDKDY GNKRLEL+GQL++LLF
Sbjct: 339 GVILAHVPVKHFDFWDKCVFVAQMLRRILIAMDDPSTVDDKDYYGNKRLELAGQLLALLF 398
Query: 241 EDRFKTMGEQVRNSSDKLLDKP-DKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRF 299
ED FK ++ + D + K +KA R L D IT GLE +STGN+ ++RF
Sbjct: 399 EDLFKKFNTDLKRTIDTHITKSQNKAARDRSRKRLDFRTDTITQGLEFAISTGNWHVKRF 458
Query: 300 RMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEA 359
+MER G+T+VL RLSFI LG MTR++ QFEK+RKVSGPRALQPSQWGMLCP DTPEGEA
Sbjct: 459 KMERSGVTEVLSRLSFISALGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPADTPEGEA 518
Query: 360 CGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKH 419
CGLVKNLALMTHVTTD++ APL L Y LGV+ LSGEE++ D +V NGLILG H
Sbjct: 519 CGLVKNLALMTHVTTDDDPAPLERLLYDLGVQPTSILSGEEVNEND--VVFLNGLILGVH 576
Query: 420 RRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADN--GISRIK 477
+PR +R++RR G IGE+VSV+ + V++A DGGRV RPL+I D+ G RI
Sbjct: 577 SQPRKLTYRLREMRRKGFIGEYVSVFEQPEHKWVHIACDGGRVTRPLIIVDSVTGQPRIF 636
Query: 478 EYHMKEL 484
+ H+ L
Sbjct: 637 DEHVSRL 643
>J9EMF9_WUCBA (tr|J9EMF9) DNA-directed RNA polymerase OS=Wuchereria bancrofti
GN=WUBG_05711 PE=3 SV=1
Length = 947
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/486 (47%), Positives = 322/486 (66%), Gaps = 5/486 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL +E+ELA++ ECP DPGGYF+I+G+EKV+LIQEQLSKNRI+I +
Sbjct: 125 MPVMLRSSKCVLKNMNESELARVQECPYDPGGYFIIRGSEKVVLIQEQLSKNRIMIGRNS 184
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ + I K++ +++ N+ + VP+ +V KAMG ESD ++V V
Sbjct: 185 KKELQCEVLSSTQERKSKTYIASRKQRYYVRHNQLSDDVPVAIVFKAMGFESDHDIVSAV 244
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEG--RGSPALKV 178
G + ++ + PS EECA + + TQE AL ++ SKVK F +S R A+
Sbjct: 245 GLEEKFVAAMAPSIEECASHQIVTQEGALQYIASKVKMRKFGPTASGTSTLPREHEAIDF 304
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
L ++++P GN ++K +Y +M+RR+M A + DD+D+ GNKRLEL+G L++L
Sbjct: 305 LSNLMIAHVPCPDGNMKMKAVYLGLMVRRLMQAEVGDTECDDRDFYGNKRLELAGSLLAL 364
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK +++ +D L K A DI V QDLIT+ L L+TGN+ I+R
Sbjct: 365 LFEDVFKRFNSELKRIADNSLGK-TLAAPLDI--VKHVRQDLITNALVDALATGNWTIKR 421
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER+G+TQVL RLS+I LG MTR++ FEK+RKVSGPR+LQPSQWGMLCP DTPEGE
Sbjct: 422 FKMERQGVTQVLSRLSYISVLGMMTRINSTFEKTRKVSGPRSLQPSQWGMLCPSDTPEGE 481
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
+CGLVKNLAL++H+TTD +E P+I L Y GVED++ L +H+P +V NG+I+G
Sbjct: 482 SCGLVKNLALISHITTDSDEKPVIRLLYNAGVEDVKSLHFSAIHSPAYHIVFLNGVIVGL 541
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
P+ V+ +R +RR G + EFVSV N Q VY+ASDGGR+CRP +I NG+ ++ +
Sbjct: 542 TIDPQRIVSTIRAVRRHGLLNEFVSVSTNAAQRSVYIASDGGRLCRPYIIVKNGVPQVTQ 601
Query: 479 YHMKEL 484
H++EL
Sbjct: 602 EHIEEL 607
>E9CI89_CAPO3 (tr|E9CI89) DNA-directed RNA polymerase OS=Capsaspora owczarzaki
(strain ATCC 30864) GN=CAOG_07859 PE=3 SV=1
Length = 1138
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/484 (47%), Positives = 328/484 (67%), Gaps = 4/484 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS C+L+ K AEL KLGECP DPGGYF+IKG EKVILIQEQLSKNR+II D+
Sbjct: 143 MPIMLRSSNCILHGKSRAELTKLGECPNDPGGYFIIKGVEKVILIQEQLSKNRMIIENDR 202
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
++V + + +LK N ++ + ++++ KA+G+E+DQE++QM+
Sbjct: 203 KGIPGASVTSSTQERKSRTNVVCKAGRFYLKHNTLSEDINVVILFKALGVETDQEIMQMI 262
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G + Y + +F E ++G+ TQ QAL + S+V+ + + ++ + A ++L
Sbjct: 263 GFEDMYQQAIAATFAESIEHGITTQNQALDFVGSRVRLAKRA-WGGARKSKVDEARELLA 321
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PVH+ NFR K +Y A+M+RR++ A+ +DDKDY GNKRLEL+GQL++LLF
Sbjct: 322 SIILAHVPVHKYNFRPKSLYLALMVRRVILALNEALPVDDKDYYGNKRLELAGQLLALLF 381
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +D + K +A ++D+ V +I+ GL +STGN+ ++RF+
Sbjct: 382 EDVFKKFNTELKKVTDLTIPK-QRATQYDV--VKKFRPQIISDGLTHAISTGNWTVKRFK 438
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
M+R G+TQVL RLS+I LG MTR+S QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 439 MDRGGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 498
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TTD+EE+ + L + GVED+ LS E+L +S+LV NGL+LG
Sbjct: 499 GLVKNLALMTHITTDDEESNIARLAFNFGVEDINVLSAEDLTRDESYLVFLNGLLLGVTI 558
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
P V A R LRR G++ F+S+ N++Q CVY+ASDGGRVCRP +I D ++ H
Sbjct: 559 HPTILVRAFRMLRRDGRLSHFLSICPNDRQRCVYIASDGGRVCRPYIIVDKNGPKVTNTH 618
Query: 481 MKEL 484
++ L
Sbjct: 619 LERL 622
>F2PPR5_TRIEC (tr|F2PPR5) DNA-directed RNA polymerase OS=Trichophyton equinum
(strain ATCC MYA-4606 / CBS 127.97) GN=TEQG_02916 PE=3
SV=1
Length = 1210
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/487 (46%), Positives = 323/487 (66%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K E+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 201 MPVMLRSSKCVLSNKSAREMYTLHECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDP 260
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+M+K +++L+ N +P+++++KAMG++SD+E++ +
Sbjct: 261 KKEIVQASVTSSSHERKSKSYIIMKKGRIYLRHNVLNDDIPIVILLKAMGIQSDKEMLLL 320
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK-RSMFSNISSEKEGRGSPALK 177
V G D Y +FEE + +YTQ+QAL +L +++K S + + A++
Sbjct: 321 VAGVDMEYQEDFAINFEEAVKLSIYTQQQALEYLGARIKINRKASGFGPARRNYVAEAIE 380
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y M RR++ A L+ +DD+DYVGNKRLEL+GQL++
Sbjct: 381 AISSVIISHVQVQDMNFRPKALYVTHMARRVLMAKLDPSLVDDRDYVGNKRLELAGQLLA 440
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + FD V+A H + IT G+ ++TGN+ ++
Sbjct: 441 LLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAYPVVAIHGNHITQGMNRAIATGNWSLK 500
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLC DTPEG
Sbjct: 501 RFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCTSDTPEG 560
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G E +++V NG +
Sbjct: 561 EACGLVKNLALMTHITTNDEEEPVQKLVFILGAEDIQTVGGRECFGQGAYIVFMNGSPIA 620
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ A R+LRR G+I EFVSV++N Q CV++++D GR+CRPL+I + SR+
Sbjct: 621 LTRRPKYFLNAFRRLRRMGRISEFVSVFINHNQKCVHISTDDGRICRPLIIVEKKRSRVT 680
Query: 478 EYHMKEL 484
H+ L
Sbjct: 681 ARHLSAL 687
>F2SPY7_TRIRC (tr|F2SPY7) DNA-directed RNA polymerase OS=Trichophyton rubrum
(strain ATCC MYA-4607 / CBS 118892) GN=TERG_04135 PE=3
SV=1
Length = 1210
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/487 (46%), Positives = 323/487 (66%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K E+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 201 MPVMLRSSKCVLSNKSAREMYTLHECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDP 260
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+M+K +++L+ N +P+++++KAMG++SD+E++ +
Sbjct: 261 KKEIVQASVTSSSHERKSKSYIIMKKGRIYLRHNVLNDDIPIVILLKAMGIQSDKEMLLL 320
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK-RSMFSNISSEKEGRGSPALK 177
V G D Y +FEE + +YTQ+QAL +L +++K S + + A++
Sbjct: 321 VAGVDMEYQEDFAINFEEAVKLSIYTQQQALEYLGARIKINRKASGFGPARRNYVAEAIE 380
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y M RR++ A L+ +DD+DYVGNKRLEL+GQL++
Sbjct: 381 AISSVIISHVQVQDMNFRPKALYVTHMARRVLMAKLDPSLVDDRDYVGNKRLELAGQLLA 440
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + FD V+A H + IT G+ ++TGN+ ++
Sbjct: 441 LLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAYPVVAIHGNHITQGMNRAIATGNWSLK 500
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLC DTPEG
Sbjct: 501 RFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCTSDTPEG 560
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G E +++V NG +
Sbjct: 561 EACGLVKNLALMTHITTNDEEEPVQKLVFTLGAEDIQTVGGRECFGQGAYIVFMNGSPIA 620
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ A R+LRR G+I EFVSV++N Q CV++++D GR+CRPL+I + SR+
Sbjct: 621 LTRRPKYFLNAFRRLRRMGRISEFVSVFINHNQKCVHVSTDDGRICRPLIIVEKKRSRVT 680
Query: 478 EYHMKEL 484
H+ L
Sbjct: 681 ARHLSAL 687
>F2RMV1_TRIT1 (tr|F2RMV1) DNA-directed RNA polymerase OS=Trichophyton tonsurans
(strain CBS 112818) GN=TESG_00223 PE=3 SV=1
Length = 1210
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/487 (46%), Positives = 323/487 (66%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K E+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 201 MPVMLRSSKCVLSNKSAREMYTLHECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDP 260
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+M+K +++L+ N +P+++++KAMG++SD+E++ +
Sbjct: 261 KKEIVQASVTSSSHERKSKSYIIMKKGRIYLRHNVLNDDIPIVILLKAMGIQSDKEMLLL 320
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK-RSMFSNISSEKEGRGSPALK 177
V G D Y +FEE + +YTQ+QAL +L +++K S + + A++
Sbjct: 321 VAGVDMEYQEDFAINFEEAVKLSIYTQQQALEYLGARIKINRKASGFGPARRNYVAEAIE 380
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y M RR++ A L+ +DD+DYVGNKRLEL+GQL++
Sbjct: 381 AISSVIISHVQVQDMNFRPKALYVTHMARRVLMAKLDPSLVDDRDYVGNKRLELAGQLLA 440
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + FD V+A H + IT G+ ++TGN+ ++
Sbjct: 441 LLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAYPVVAIHGNHITQGMNRAIATGNWSLK 500
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLC DTPEG
Sbjct: 501 RFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCTSDTPEG 560
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G E +++V NG +
Sbjct: 561 EACGLVKNLALMTHITTNDEEEPVQKLVFILGAEDIQTVGGRECFGQGAYIVFMNGSPIA 620
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ A R+LRR G+I EFVSV++N Q CV++++D GR+CRPL+I + SR+
Sbjct: 621 LTRRPKYFLNAFRRLRRMGRISEFVSVFINHNQKCVHISTDDGRICRPLIIVEKKRSRVT 680
Query: 478 EYHMKEL 484
H+ L
Sbjct: 681 ARHLSAL 687
>D4AS53_ARTBC (tr|D4AS53) DNA-directed RNA polymerase OS=Arthroderma benhamiae
(strain ATCC MYA-4681 / CBS 112371) GN=ARB_07068 PE=3
SV=1
Length = 1196
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/487 (46%), Positives = 323/487 (66%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K E+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 187 MPVMLRSSKCVLSNKSAREMYTLHECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDP 246
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+M+K +++L+ N +P+++++KAMG++SD+E++ +
Sbjct: 247 KKEIVQASVTSSSHERKSKSYIIMKKGRIYLRHNVLNDDIPIVILLKAMGIQSDKEMLLL 306
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK-RSMFSNISSEKEGRGSPALK 177
V G D Y +FEE + +YTQ+QAL +L +++K S + + A++
Sbjct: 307 VAGVDMEYQEDFAINFEEAVKLSIYTQQQALEYLGARIKINRKASGFGPARRNYVAEAIE 366
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y M RR++ A L+ +DD+DYVGNKRLEL+GQL++
Sbjct: 367 AISSVIISHVQVQDMNFRPKALYVTHMARRVLMAKLDPSLVDDRDYVGNKRLELAGQLLA 426
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + FD V+A H + IT G+ ++TGN+ ++
Sbjct: 427 LLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAYPVVAIHGNHITQGMNRAIATGNWSLK 486
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLC DTPEG
Sbjct: 487 RFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCTSDTPEG 546
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G E +++V NG +
Sbjct: 547 EACGLVKNLALMTHITTNDEEEPVQKLVFTLGAEDIQTVGGRECFGQGAYIVFMNGSPIA 606
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ A R+LRR G+I EFVSV++N Q CV++++D GR+CRPL+I + SR+
Sbjct: 607 LTRRPKYFLNAFRRLRRMGRISEFVSVFINHNQKCVHVSTDDGRICRPLIIVEKKRSRVT 666
Query: 478 EYHMKEL 484
H+ L
Sbjct: 667 ARHLSAL 673
>I2CNY0_9STRA (tr|I2CNY0) DNA-directed RNA polymerase OS=Nannochloropsis gaditana
CCMP526 GN=RPC2 PE=2 SV=1
Length = 1197
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/496 (49%), Positives = 334/496 (67%), Gaps = 15/496 (3%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+P+MLRSC+C+L + EAELA+ ECP DPGGYF++KG E+VIL+QEQLSKNR+II D
Sbjct: 160 IPIMLRSCKCILAGRSEAELAEKKECPYDPGGYFIVKGVERVILMQEQLSKNRVIIEEDN 219
Query: 61 NRNIXXXXXXXXXXXXXXXDI-VMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
N+ +I V K++LK N VP++VV+KAMGM+SDQE+V M
Sbjct: 220 KGNVSASITSSTHDRKGRSNIFVKNGTKVYLKNNLLGDDVPIVVVLKAMGMQSDQEIVCM 279
Query: 120 VGRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRG------- 172
VG P PS EE G+ TQ QAL ++ +K+ R+ N G G
Sbjct: 280 VGDSPEMLDAFAPSLEEPYHLGICTQAQALRYIGAKI-RNTTQNRGPGPSGMGFAFYRRA 338
Query: 173 -SP---ALKVLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKR 228
SP A +VL L+++PV +FR KCI+ ++RR++ ++ +DDKDY GNKR
Sbjct: 339 SSPEEEAREVLASVILNHVPVINFDFRTKCIFVCHVIRRVLLTHRDRSQLDDKDYYGNKR 398
Query: 229 LELSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLEST 288
LEL+GQL+SLLFED FK + Q++ +D+ L KP++ FD+ + D IT+G
Sbjct: 399 LELAGQLLSLLFEDLFKRLNVQLKKQADQGLSKPNRTQSFDVIKCI--RTDTITNGFIQA 456
Query: 289 LSTGNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGM 348
++TGN++++RFRM+R+G+TQVL RLS+I LG MTR++ QFEK+RKVSGPR+LQPSQWGM
Sbjct: 457 IATGNWKLQRFRMDRQGVTQVLTRLSYISCLGMMTRINSQFEKTRKVSGPRSLQPSQWGM 516
Query: 349 LCPCDTPEGEACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFL 408
+CP DTPEGEACGLVKNLAL+ HVTTDEE P+ LC+ LG+ED+ LSG E++ ++L
Sbjct: 517 ICPADTPEGEACGLVKNLALLAHVTTDEESEPIRKLCFDLGIEDVTLLSGAEINASSNYL 576
Query: 409 VIFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVI 468
V NGLI+G H RP FV +R LRR G + EFVSV ++E Q +Y+A+DGGRVCRPL++
Sbjct: 577 VFLNGLIVGCHSRPLRFVRLLRLLRRKGLVAEFVSVCLHEVQRAIYIATDGGRVCRPLLV 636
Query: 469 ADNGISRIKEYHMKEL 484
+ G+ R+ M++L
Sbjct: 637 CEKGVPRLTNMMMRQL 652
>E4UTX8_ARTGP (tr|E4UTX8) DNA-directed RNA polymerase OS=Arthroderma gypseum
(strain ATCC MYA-4604 / CBS 118893) GN=MGYG_03788 PE=3
SV=1
Length = 1210
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/487 (46%), Positives = 323/487 (66%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K E+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 201 MPVMLRSSKCVLSNKSAREMYTLHECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDP 260
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+M+K +++L+ N +P+++++KAMG++SD+E++ +
Sbjct: 261 KKEIVQASVTSSSHERKSKSYIIMKKGRIYLRHNVLNDDIPIVILLKAMGIQSDKEMLLL 320
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK-RSMFSNISSEKEGRGSPALK 177
V G D Y +FEE + +YTQ+QAL +L +++K S + + A++
Sbjct: 321 VAGVDMEYQEDFAINFEEAVKLNIYTQQQALEYLGARIKINRKASGFGPARRNYVAEAIE 380
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y M RR++ A L+ +DD+DYVGNKRLEL+GQL++
Sbjct: 381 AISSVIISHVQVQDMNFRPKALYVTHMARRVLMAKLDPSLVDDRDYVGNKRLELAGQLLA 440
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + FD V+A H + IT G+ ++TGN+ ++
Sbjct: 441 LLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAYPVVAIHGNHITQGMNRAIATGNWSLK 500
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLC DTPEG
Sbjct: 501 RFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCTSDTPEG 560
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G E +++V NG +
Sbjct: 561 EACGLVKNLALMTHITTNDEEEPVQKLVFTLGAEDIQTVGGRECFGQGAYIVFMNGSPIA 620
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ A R+LRR G+I EFVSV++N Q CV++++D GR+CRPL+I + SR+
Sbjct: 621 LTRRPKYFLNAFRRLRRMGRISEFVSVFINHNQKCVHVSTDDGRICRPLIIVEKKRSRVT 680
Query: 478 EYHMKEL 484
H+ L
Sbjct: 681 ARHLSAL 687
>D4DEV8_TRIVH (tr|D4DEV8) DNA-directed RNA polymerase OS=Trichophyton verrucosum
(strain HKI 0517) GN=TRV_05698 PE=3 SV=1
Length = 1196
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/487 (46%), Positives = 323/487 (66%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K E+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 187 MPVMLRSSKCVLSNKSAREMYTLHECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDP 246
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+M+K +++L+ N +P+++++KAMG++SD+E++ +
Sbjct: 247 KKEIVQASVTSSSHERKSKSYIIMKKGRIYLRHNVLNDDIPIVILLKAMGIQSDKEMLLL 306
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK-RSMFSNISSEKEGRGSPALK 177
V G D Y +FEE + +YTQ+QAL +L +++K S + + A++
Sbjct: 307 VAGVDMEYQEDFAINFEEAVKLSIYTQQQALEYLGARIKINRKASGFGPARRNYVAEAIE 366
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y M RR++ A L+ +DD+DYVGNKRLEL+GQL++
Sbjct: 367 AISSVIISHVQVQDMNFRPKALYVTHMARRVLMAKLDPSLVDDRDYVGNKRLELAGQLLA 426
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + FD V+A H + IT G+ ++TGN+ ++
Sbjct: 427 LLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAYPVVAIHGNHITQGMNRAIATGNWSLK 486
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLC DTPEG
Sbjct: 487 RFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCTSDTPEG 546
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G E +++V NG +
Sbjct: 547 EACGLVKNLALMTHITTNDEEEPVQKLVFTLGAEDIQTVGGRECFGQGAYIVFMNGSPIA 606
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ A R+LRR G+I EFVSV++N Q CV++++D GR+CRPL+I + SR+
Sbjct: 607 LTRRPKYFLNAFRRLRRMGRISEFVSVFINHNQKCVHVSTDDGRICRPLIIVEKKRSRVT 666
Query: 478 EYHMKEL 484
H+ L
Sbjct: 667 ARHLSAL 673
>J0DQK5_LOALO (tr|J0DQK5) DNA-directed RNA polymerase OS=Loa loa GN=LOAG_16850
PE=3 SV=1
Length = 1136
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/487 (47%), Positives = 322/487 (66%), Gaps = 6/487 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL +E+ELA + ECP DPGGYF+I+G+EKV+LIQEQLSKNRI+I +
Sbjct: 126 MPVMLRSSKCVLKNMNESELAHVQECPYDPGGYFIIRGSEKVVLIQEQLSKNRIMIGRNS 185
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ + I +K++ +++ N+ + VP+ +V KAMG ESD ++V V
Sbjct: 186 KKELQCEILSSTQERKSKTYIASKKQRYYVRHNQLSDDVPVAIVFKAMGFESDHDIVSAV 245
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEG---RGSPALK 177
G + ++ + PS EECA + + TQE AL ++ SKVK F +S R A+
Sbjct: 246 GLEEKFVAAMAPSIEECASHQIVTQEGALQYIASKVKMRKFGPFASGTSSTLPREHEAID 305
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
L ++++P GN ++K IY +M+RR+M A + DD+D+ GNKRLEL+G L++
Sbjct: 306 FLSNLMIAHVPCPDGNMKMKAIYLGLMIRRLMQAEVGDTECDDRDFYGNKRLELAGSLLA 365
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK +++ +D L K A DI V QDLIT+ L L+TGN+ I+
Sbjct: 366 LLFEDVFKRFNSELKRIADNSLGK-TLAAPLDI--VKHMRQDLITNALVDALATGNWTIK 422
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RF+MER+G+TQVL RLS+I LG MTR++ FEK+RKVSGPR+LQPSQWGMLCP DTPEG
Sbjct: 423 RFKMERQGVTQVLSRLSYISVLGMMTRINSTFEKTRKVSGPRSLQPSQWGMLCPSDTPEG 482
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
E+CGLVKNLAL++H+TTD +E P+I L Y GVED++ L +H+P +V NG+I+G
Sbjct: 483 ESCGLVKNLALISHITTDSDEEPVIRLLYNSGVEDVKSLHFSAIHSPVYHIVFLNGVIVG 542
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
P+ V+ +R +RR G + EFVSV N Q VY+ASDGGR+CRP +I NG+ ++
Sbjct: 543 LTIDPQRIVSTIRAVRRHGLLNEFVSVSTNAAQRSVYIASDGGRLCRPYIIVKNGVPQVT 602
Query: 478 EYHMKEL 484
+ H++EL
Sbjct: 603 QEHIEEL 609
>E3X721_ANODA (tr|E3X721) DNA-directed RNA polymerase OS=Anopheles darlingi
GN=AND_15508 PE=3 SV=1
Length = 1134
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/484 (47%), Positives = 325/484 (67%), Gaps = 4/484 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS C+L K + EL+++ ECP+DPGGYF+I+G EKVILIQEQLS N++I D
Sbjct: 135 MPIMLRSSNCILNGKSDYELSQVNECPMDPGGYFIIRGTEKVILIQEQLSWNKMI-TEDY 193
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
N I + + + +LK N +++P+ +++KAMG+ SDQE++Q+V
Sbjct: 194 NGLIQCQVTSSTHEKKSRTILYSKHGRYYLKHNSMTEEIPVAIILKAMGVASDQEIMQLV 253
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G D PS E A++ VYTQ++AL ++ SK+ F+ +++ A +L
Sbjct: 254 GIDQETQKRFAPSLLEAAKHKVYTQQRALEYMGSKLIAKRFTTAATKYRTTADEARDLLA 313
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV NF++K IY A+M+RR+M A L++ A+DD+DY GNKRLEL+G L+SL+F
Sbjct: 314 TTILAHVPVRSFNFQVKAIYVALMIRRVMAAELDRSAVDDRDYYGNKRLELAGSLLSLMF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED K +++ +DK + K KA +FD+ + + LIT GLE+ +STGN+ I+RF+
Sbjct: 374 EDLLKRFNWELKMIADKNIPKI-KAAQFDVGKHM--REALITSGLETAISTGNWTIKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
MER G+TQVL RLS+I LG MTRV+ QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TT+ +E P+I L Y GVED+ + GE ++ P F+V NG ILG
Sbjct: 491 GLVKNLALMTHITTEVDEEPVIRLAYNAGVEDIRLIGGETINNPKVFMVFINGNILGVTI 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
R V R +RR G IG FVS++ + Q CVY+ +DGGR+CRP +I G+ + + H
Sbjct: 551 AYRRLVEVFRMMRRRGLIGAFVSIHTSFTQRCVYIHTDGGRLCRPYIIVQAGLPLVLQEH 610
Query: 481 MKEL 484
+++L
Sbjct: 611 IEQL 614
>J9E9F1_AEDAE (tr|J9E9F1) DNA-directed RNA polymerase OS=Aedes aegypti
GN=AaeL_AAEL017156 PE=3 SV=1
Length = 1134
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/484 (48%), Positives = 325/484 (67%), Gaps = 4/484 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K E EL+++ ECP+DPGGYFVI+G EKVILIQEQ+S N++I D
Sbjct: 135 MPIMLRSSNCVLTGKSEYELSQVNECPMDPGGYFVIRGTEKVILIQEQVSWNKMI-TEDY 193
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
N I ++ + K +LK N +++P+ ++ KAMG+ SDQE++Q+V
Sbjct: 194 NNVIQCQVTSSTHEKKSRTILLSKHGKYYLKHNSMTEEIPVAIIFKAMGIASDQEIMQLV 253
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G D PS E + VYTQ++AL ++ SK+ F+ +++ + A +L
Sbjct: 254 GIDTETQKRFAPSLLEATNHKVYTQQRALEYMGSKLIAKRFTTAATKYKTTADEARDLLA 313
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV NF++K IY A+M+RR+M A ++K A+DD+DY GNKRLEL+G L+SL+F
Sbjct: 314 TTILAHVPVPNFNFQVKAIYVALMIRRVMAAEVDKSAVDDRDYYGNKRLELAGSLLSLMF 373
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +DK + K KA +FD+ V LI+ GLE+ +STGN+ I+RF+
Sbjct: 374 EDLFKRFNWELKMIADKNIPKI-KAAQFDV--VKHMRAALISTGLETAISTGNWTIKRFK 430
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
MER G+TQVL RLS+I LG MTRV+ QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 431 MERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 490
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TT+ +E P+I L Y GVED+ L GE ++ P F+V NG ILG
Sbjct: 491 GLVKNLALMTHITTEVDEEPVIRLAYNSGVEDIRLLGGETINNPKVFMVFINGNILGVTI 550
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKEYH 480
+ V R +RR G IG FVS++ + Q CVY+ +DGGR+CRP +I NG +++ H
Sbjct: 551 GYKRLVEVFRMMRRKGLIGSFVSIHTSFTQRCVYIHTDGGRLCRPYIIVQNGRPLVQQEH 610
Query: 481 MKEL 484
+++L
Sbjct: 611 IEQL 614
>A8P4S3_BRUMA (tr|A8P4S3) DNA-directed RNA polymerase III subunit 127.6 kDa
polypeptide, putative OS=Brugia malayi GN=Bm1_16400 PE=3
SV=1
Length = 1104
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/486 (46%), Positives = 321/486 (66%), Gaps = 5/486 (1%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL +E+ELA++ ECP DPGGYF+I+G+EKV+LIQEQLSKNRI+I +
Sbjct: 126 MPVMLRSSKCVLKNMNESELARVQECPYDPGGYFIIRGSEKVVLIQEQLSKNRIMIGRNS 185
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
+ + I +K++ +++ N+ + VP+ ++ KAMG ESD ++V V
Sbjct: 186 KKELQCEILSSTQERKSKTYIASKKQRYYVRHNQLSDDVPIAIIFKAMGFESDHDIVSAV 245
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEG--RGSPALKV 178
G + ++ + PS EECA + + TQE AL ++ SKVK F +S R A+
Sbjct: 246 GLEEKFVAAMAPSIEECASHQIVTQEGALQYIASKVKIRKFGPATSGTSTLPREHEAIDF 305
Query: 179 LEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISL 238
L ++++P GN ++K +Y +M+RR+M A + DD+D+ GNKRLEL+G L++L
Sbjct: 306 LSNLMIAHVPCPDGNMKMKAVYLGLMVRRLMQAEVGDTECDDRDFYGNKRLELAGSLLAL 365
Query: 239 LFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRR 298
LFED FK +++ +D L K A DI V QDLIT+ L L+TGN+ I+R
Sbjct: 366 LFEDVFKRFNSELKRIADNSLGK-TLAAPLDI--VKHVRQDLITNALVDALATGNWTIKR 422
Query: 299 FRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 358
F+MER+G+TQVL RLS+I LG MTR++ FEK+RKVSGPR+LQPSQWGMLCP DTPEGE
Sbjct: 423 FKMERQGVTQVLSRLSYISVLGMMTRINSTFEKTRKVSGPRSLQPSQWGMLCPSDTPEGE 482
Query: 359 ACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGK 418
+CGLVKNLAL++H+TTD +E P+I L Y GVED++ L +H P +V NG+I+G
Sbjct: 483 SCGLVKNLALLSHITTDSDEKPVIRLLYNAGVEDVKSLHFSAIHNPAYHIVFLNGVIVGL 542
Query: 419 HRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIKE 478
P+ V+ +R +RR G + EFVSV N Q VY+ASDGGR+CRP +I N I ++ +
Sbjct: 543 TIDPQRIVSTIRAVRRHGLLNEFVSVSTNAAQRSVYIASDGGRLCRPYIIVKNSIPQVTQ 602
Query: 479 YHMKEL 484
H++EL
Sbjct: 603 EHIEEL 608
>K6VG34_9APIC (tr|K6VG34) DNA-directed RNA polymerase OS=Plasmodium cynomolgi
strain B GN=PCYB_131520 PE=3 SV=1
Length = 1300
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/509 (47%), Positives = 332/509 (65%), Gaps = 27/509 (5%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
+PVMLRS C+L+ K E EL KLGECP DPGGYF++KG E+V+L+QEQLSKNRII+ MD
Sbjct: 219 LPVMLRSDICILHNKSEEELMKLGECPYDPGGYFIVKGTERVLLMQEQLSKNRIIVEMDI 278
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
NI IV + K++LK N F + + + ++++AMG ESDQE+ QM+
Sbjct: 279 KHNICATITSTTAESKSRCAIVYKNNKLYLKHNSFIEDIGVCIILRAMGYESDQEIFQMI 338
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSN--ISSEKEGRGSPALKV 178
G Y +L S E + T AL ++ K++ + + SS KE + +
Sbjct: 339 GSHRNYLNGILLSLYELYSENIKTNLDALLYIGKKIRPRLLAKGFFSSMKEKQVKNEKDI 398
Query: 179 LEE--EFLSNI---PVHQGN---FRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLE 230
+EE +FLS + + Q N FR K +M+RR++D+ NK+ +DDKDY GNKRLE
Sbjct: 399 IEEGLDFLSRVLLSHIQQKNKYDFRNKARCICLMIRRVLDSANNKNELDDKDYYGNKRLE 458
Query: 231 LSGQLISLLFEDRFKTMGEQVRNSSDKLLDKPDKANRF--------------DISSVLAR 276
L+GQLISLLFED +K ++ D+ L K ++N D+ L +
Sbjct: 459 LAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSNYTSKLKYSGNINETYPDVFRSLPK 518
Query: 277 HQDLITHGLESTLSTGNFEIRRFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVS 336
D+IT G+++ +STGN+ I+RF+ME+ G++QVL RLSFI +G MTR++ QFEK RKVS
Sbjct: 519 --DIITRGMQAAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFEKGRKVS 576
Query: 337 GPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEAP-LISLCYYLGVEDMEY 395
GPRALQPSQWG+LCPCDTPEGE+CGLVKNLALMTHVT D E LI + Y LGVED +
Sbjct: 577 GPRALQPSQWGVLCPCDTPEGESCGLVKNLALMTHVTNDNENNEHLIEILYTLGVEDSDS 636
Query: 396 LSGEELHTPDSFLVIFNGLILGKHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYL 455
L+GEE++ F VIFNG++LG H++PR F+ +R LRR GKIG+FVS+Y N +Y+
Sbjct: 637 LTGEEMYKEGIFFVIFNGILLGVHKKPRTFMRRIRCLRRYGKIGQFVSIYDNFLHNAIYI 696
Query: 456 ASDGGRVCRPLVIADNGISRIKEYHMKEL 484
++DGGR+CRPL+I +NG S++ + H+ L
Sbjct: 697 STDGGRLCRPLIIVENGKSKLSQEHIVSL 725
>C5FVS4_ARTOC (tr|C5FVS4) DNA-directed RNA polymerase OS=Arthroderma otae (strain
ATCC MYA-4605 / CBS 113480) GN=MCYG_06827 PE=3 SV=1
Length = 1211
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/487 (46%), Positives = 323/487 (66%), Gaps = 3/487 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MPVMLRS +CVL K E+ L ECPLDPGGYF++ G EKVIL+QEQLSKNR+I+ D
Sbjct: 202 MPVMLRSSKCVLSNKSAREMYTLHECPLDPGGYFIVNGTEKVILVQEQLSKNRVIVETDS 261
Query: 61 NRNIXXXXXXXXXXXXXXXD-IVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQM 119
+ I I+M+K +++L+ N +P+++++KAMG++SD+E++ +
Sbjct: 262 KKEIVQASVTSSSHERKSKSYIIMKKGRIYLRHNVLNDDIPIVILLKAMGIQSDKEMLLL 321
Query: 120 V-GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVK-RSMFSNISSEKEGRGSPALK 177
V G D Y +FEE + G++TQ+QAL +L +++K S + + A++
Sbjct: 322 VAGVDLEYQEDFAINFEEAIKLGIFTQQQALEYLGARIKINRKASGFGPARRNYVAEAIE 381
Query: 178 VLEEEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS 237
+ +S++ V NFR K +Y M RR++ A L+ +DD+DYVGNKRLEL+GQL++
Sbjct: 382 AISSVIISHVQVQDMNFRPKALYVTYMARRVLMAKLDPSLVDDRDYVGNKRLELAGQLLA 441
Query: 238 LLFEDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIR 297
LLFED FK ++ + DK+L KP + FD V+A H + IT G+ ++TGN+ ++
Sbjct: 442 LLFEDLFKKFCFDIKMNIDKVLKKPVRTEAFDAYPVVAIHGNHITQGMNRAIATGNWSLK 501
Query: 298 RFRMERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 357
RFRMER G+T VL RLS+I LG MTR+S QFEK+RKVSGPRALQPSQ+GMLC DTPEG
Sbjct: 502 RFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCTSDTPEG 561
Query: 358 EACGLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILG 417
EACGLVKNLALMTH+TT++EE P+ L + LG ED++ + G E +++V NG +
Sbjct: 562 EACGLVKNLALMTHITTNDEEEPVQKLVFTLGAEDIQTVGGRECFGQGAYIVFMNGSPIA 621
Query: 418 KHRRPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNGISRIK 477
RRP+ F+ A R+LRR G+I EFVSV++N Q V++++D GR+CRPL+I + S++
Sbjct: 622 LTRRPKYFLNAFRRLRRMGRISEFVSVFINHNQKSVHVSTDDGRICRPLIIVEKKRSKVT 681
Query: 478 EYHMKEL 484
H+ L
Sbjct: 682 ARHLSAL 688
>Q7Q416_ANOGA (tr|Q7Q416) DNA-directed RNA polymerase (Fragment) OS=Anopheles
gambiae GN=AGAP008151 PE=3 SV=4
Length = 1089
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/472 (48%), Positives = 320/472 (67%), Gaps = 4/472 (0%)
Query: 1 MPVMLRSCRCVLYEKDEAELAKLGECPLDPGGYFVIKGNEKVILIQEQLSKNRIIIVMDK 60
MP+MLRS CVL K + +L+K+ ECP+DPGGYF+I+G EKVILIQEQLS N++I D
Sbjct: 130 MPIMLRSSNCVLTGKSDYQLSKVNECPMDPGGYFIIRGTEKVILIQEQLSWNKMI-TEDY 188
Query: 61 NRNIXXXXXXXXXXXXXXXDIVMEKEKMWLKLNRFAKQVPLMVVMKAMGMESDQEVVQMV 120
N I ++ + + +LK N +++P+ +++KAMG+ SDQE++Q+V
Sbjct: 189 NGVIQCQVTSSTHEKKSRTILLTKHGRYYLKHNSMTEEIPVAIILKAMGIASDQEIMQLV 248
Query: 121 GRDPRYSLLLLPSFEECAQNGVYTQEQALAHLDSKVKRSMFSNISSEKEGRGSPALKVLE 180
G DP PS E A + V+TQ++AL ++ SK+ F+ +++ + A +L
Sbjct: 249 GIDPETQKRFAPSLLEAANHKVFTQQRALEYMGSKLIAKRFTTAATKYKTTADEARDLLA 308
Query: 181 EEFLSNIPVHQGNFRLKCIYAAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLF 240
L+++PV NF++K IY A+M+RR+M A L++ A+DD+DY GNKRLEL+G L+SL+F
Sbjct: 309 TTILAHVPVPSFNFQVKAIYVALMIRRVMAAELDRSAVDDRDYYGNKRLELAGSLLSLMF 368
Query: 241 EDRFKTMGEQVRNSSDKLLDKPDKANRFDISSVLARHQDLITHGLESTLSTGNFEIRRFR 300
ED FK +++ +DK + K KA +FD+ + + LIT GLE+ +STGN+ I+RF+
Sbjct: 369 EDLFKRFNWELKMIADKNIPKI-KAAQFDVGKHM--REALITAGLETAISTGNWTIKRFK 425
Query: 301 MERKGMTQVLQRLSFIGFLGQMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEAC 360
MER G+TQVL RLS+I LG MTRV+ QFEK+RKVSGPR+LQPSQWGMLCP DTPEGEAC
Sbjct: 426 MERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEAC 485
Query: 361 GLVKNLALMTHVTTDEEEAPLISLCYYLGVEDMEYLSGEELHTPDSFLVIFNGLILGKHR 420
GLVKNLALMTH+TT+ +E P+I L Y GVED+ L GE ++ P F+V NG ILG
Sbjct: 486 GLVKNLALMTHITTEVDEEPVIRLAYNAGVEDIRLLGGETINNPKVFMVFINGNILGVTI 545
Query: 421 RPRGFVTAMRKLRRAGKIGEFVSVYVNEKQGCVYLASDGGRVCRPLVIADNG 472
R V R +RR G IG FVS++ + Q CVY+ +DGGR+CRP +I G
Sbjct: 546 AYRRLVEVFRMMRRRGLIGAFVSIHTSFTQRCVYIHTDGGRLCRPYIIVQAG 597