Miyakogusa Predicted Gene

Lj0g3v0194139.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0194139.1 Non Chatacterized Hit- tr|A5AES7|A5AES7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,56.92,0.000002,seg,NULL,CUFF.12274.1
         (150 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A5AES7_VITVI (tr|A5AES7) Putative uncharacterized protein OS=Vit...    56   5e-06

>A5AES7_VITVI (tr|A5AES7) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_042323 PE=4 SV=1
          Length = 155

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 86  IITVDFAAFVERNWDDSVVCSEVSPYQIVDSEHLMPCHQMHLVNHXXXXXXXXXXSYHWD 145
           + T DFA  V  NWDDS   S   P Q+VDSEHL+ C++MHLV+H          SYH D
Sbjct: 92  LFTADFAVSVAGNWDDSESRSGGLPCQVVDSEHLVACYRMHLVSH-AAAVAAAWASYHPD 150

Query: 146 CHLPC 150
              PC
Sbjct: 151 LLPPC 155