Miyakogusa Predicted Gene
- Lj0g3v0190579.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0190579.1 tr|A2Q1M9|A2Q1M9_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_2g0,82.76,0.0000001,seg,NULL,CUFF.12076.1
(46 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
A2Q1M9_MEDTR (tr|A2Q1M9) Pentatricopeptide repeat-containing pro... 60 2e-07
>A2Q1M9_MEDTR (tr|A2Q1M9) Pentatricopeptide repeat-containing protein
OS=Medicago truncatula GN=MTR_2g036560 PE=4 SV=1
Length = 849
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/29 (82%), Positives = 26/29 (89%)
Query: 1 MEGTLFPNRPVLPVPANKPTQSLKFKPTL 29
MEGTLFPNRPVLP+P KPTQ+LKFKPT
Sbjct: 6 MEGTLFPNRPVLPLPTKKPTQALKFKPTF 34