Miyakogusa Predicted Gene

Lj0g3v0186889.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0186889.2 tr|D7M1N3|D7M1N3_ARALL Enhancer of ag-4 2
OS=Arabidopsis lyrata subsp. lyrata GN=HUA2 PE=4 SV=1,95.65,0.0000004,
,CUFF.11903.2
         (144 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D7M1N3_ARALL (tr|D7M1N3) Enhancer of ag-4 2 OS=Arabidopsis lyrat...    60   3e-07

>D7M1N3_ARALL (tr|D7M1N3) Enhancer of ag-4 2 OS=Arabidopsis lyrata subsp. lyrata
           GN=HUA2 PE=4 SV=1
          Length = 1398

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/27 (85%), Positives = 25/27 (92%)

Query: 76  RPEDWDKAPDPKKYFVQFFGTEEMFLV 102
           RPEDWD+APDPKKYFVQFFGTEE+  V
Sbjct: 40  RPEDWDRAPDPKKYFVQFFGTEEIAFV 66