Miyakogusa Predicted Gene

Lj0g3v0165899.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0165899.3 CUFF.10397.3
         (102 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3SJF3_LOTJA (tr|I3SJF3) Uncharacterized protein OS=Lotus japoni...   145   4e-33

>I3SJF3_LOTJA (tr|I3SJF3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 124

 Score =  145 bits (366), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 76/96 (79%), Positives = 82/96 (85%)

Query: 7   KKYVMILASLEHLRARTRFRLQKSLILSKDGDMSNLNYENFAYLSEMGSCVPSLDDISLH 66
           KKYV+ILASLEHLR R  FRL +SLILS DGDMS+LN E+ A L EM   VPSLDDIS H
Sbjct: 29  KKYVIILASLEHLRTRPMFRLHRSLILSNDGDMSDLNCESSANLYEMSPHVPSLDDISPH 88

Query: 67  ERVAVFSSVGSINSGETISSSRTSKRLKIRSIKLDR 102
           ER AVFSS+GSINSGETISSSRTSKRLKIRS+KLDR
Sbjct: 89  ERSAVFSSIGSINSGETISSSRTSKRLKIRSVKLDR 124