Miyakogusa Predicted Gene

Lj0g3v0164019.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0164019.1 Non Chatacterized Hit- tr|F6HX39|F6HX39_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,81.54,0.00000000000002,seg,NULL; NARP1,N-terminal
acetyltransferase A, auxiliary subunit,CUFF.10244.1
         (99 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3SZZ2_LOTJA (tr|I3SZZ2) Uncharacterized protein OS=Lotus japoni...    96   3e-18
F6HX39_VITVI (tr|F6HX39) Putative uncharacterized protein OS=Vit...    57   2e-06

>I3SZZ2_LOTJA (tr|I3SZZ2) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
          Length = 114

 Score = 96.3 bits (238), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 50/77 (64%), Positives = 53/77 (68%)

Query: 1   MCFSLLVSGDGVKVDEEMSKLLPSQKNKMXXXXXXXXXXXXXXXXXXXXXLSASEVFKSR 60
           MCFSLLVSGDGVKVDEEMSKLLPSQKNKM                     LSASEV KSR
Sbjct: 36  MCFSLLVSGDGVKVDEEMSKLLPSQKNKMRQKQRKAEARAKKGAEEKNEELSASEVSKSR 95

Query: 61  KRHVKPVNPDPHGEKLL 77
           KRHVK VNPDPHG +++
Sbjct: 96  KRHVKLVNPDPHGGEVI 112


>F6HX39_VITVI (tr|F6HX39) Putative uncharacterized protein OS=Vitis vinifera
           GN=VIT_09s0002g05110 PE=2 SV=1
          Length = 1332

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/72 (48%), Positives = 41/72 (56%)

Query: 8   SGDGVKVDEEMSKLLPSQKNKMXXXXXXXXXXXXXXXXXXXXXLSASEVFKSRKRHVKPV 67
           S    + ++EMS+LLPSQK KM                      SAS V KS KRHVKPV
Sbjct: 578 SKSAAEEEDEMSRLLPSQKKKMRQKQRKAEARAKKEAEGKNEETSASGVSKSGKRHVKPV 637

Query: 68  NPDPHGEKLLQI 79
           +PDPHGEKLLQ+
Sbjct: 638 DPDPHGEKLLQV 649