Miyakogusa Predicted Gene

Lj0g3v0162439.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0162439.1 tr|I1MER5|I1MER5_SOYBN Ribosomal protein L34
OS=Glycine max PE=3 SV=1,64.17,5e-16,seg,NULL,CUFF.10298.1
         (115 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3SSN4_LOTJA (tr|I3SSN4) Ribosomal protein L34 OS=Lotus japonicu...   127   2e-27
I3SXU5_LOTJA (tr|I3SXU5) Ribosomal protein L34 OS=Lotus japonicu...   126   3e-27
C6T1Q9_SOYBN (tr|C6T1Q9) Ribosomal protein L34 OS=Glycine max PE...    67   3e-09
K4AVP3_SOLLC (tr|K4AVP3) Uncharacterized protein OS=Solanum lyco...    67   3e-09
M1BXS6_SOLTU (tr|M1BXS6) Uncharacterized protein OS=Solanum tube...    66   5e-09
I1M1U7_SOYBN (tr|I1M1U7) Ribosomal protein L34 OS=Glycine max PE...    66   5e-09
I1MER5_SOYBN (tr|I1MER5) Ribosomal protein L34 OS=Glycine max PE...    65   1e-08
B9S989_RICCO (tr|B9S989) Ribosomal protein L34 OS=Ricinus commun...    65   1e-08
C6T2Q1_SOYBN (tr|C6T2Q1) Ribosomal protein L34 OS=Glycine max PE...    65   1e-08
D7TJJ7_VITVI (tr|D7TJJ7) Ribosomal protein L34 OS=Vitis vinifera...    62   7e-08
A5AGC2_VITVI (tr|A5AGC2) Ribosomal protein L34 OS=Vitis vinifera...    61   1e-07
D7KDQ0_ARALL (tr|D7KDQ0) Ribosomal protein L34 family protein OS...    60   2e-07
M4D2Z9_BRARP (tr|M4D2Z9) Uncharacterized protein OS=Brassica rap...    60   2e-07
M4FI44_BRARP (tr|M4FI44) Uncharacterized protein OS=Brassica rap...    60   2e-07
R0GK25_9BRAS (tr|R0GK25) Uncharacterized protein OS=Capsella rub...    60   2e-07
B9I1N1_POPTR (tr|B9I1N1) Ribosomal protein L34 (Fragment) OS=Pop...    59   7e-07

>I3SSN4_LOTJA (tr|I3SSN4) Ribosomal protein L34 OS=Lotus japonicus PE=2 SV=1
          Length = 146

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/112 (62%), Positives = 70/112 (62%)

Query: 1   MASLSVSPWISMRVPTASLAFTAXXXXXXXXXXXXHNTXXXXXXXXXXXXXXXXXXXXXX 60
           MASLSVSPWISMRVPTASLAFTA            HNT                      
Sbjct: 1   MASLSVSPWISMRVPTASLAFTASSSIPTTSSLSLHNTRSPLLRCSFLSSPSSLSFPSSS 60

Query: 61  XXXXXXXXDLISNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGF 112
                   DLISNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGF
Sbjct: 61  LSGLSLGLDLISNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGF 112


>I3SXU5_LOTJA (tr|I3SXU5) Ribosomal protein L34 OS=Lotus japonicus PE=2 SV=1
          Length = 146

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 70/112 (62%), Positives = 70/112 (62%)

Query: 1   MASLSVSPWISMRVPTASLAFTAXXXXXXXXXXXXHNTXXXXXXXXXXXXXXXXXXXXXX 60
           MASLSVSPWISMRVPTASLAFTA            HNT                      
Sbjct: 1   MASLSVSPWISMRVPTASLAFTAPSSIPTTSPLSLHNTRSPLLRCSFLSSPSSLSFPSSS 60

Query: 61  XXXXXXXXDLISNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGF 112
                   DLISNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGF
Sbjct: 61  LSGLSLGLDLISNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGF 112


>C6T1Q9_SOYBN (tr|C6T1Q9) Ribosomal protein L34 OS=Glycine max PE=2 SV=1
          Length = 146

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/47 (76%), Positives = 38/47 (80%), Gaps = 1/47 (2%)

Query: 69  DLISNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRR 115
           DL SN GT  GK  GLVVRAGK  ALC TKR+RSRKSLARTHGFR+R
Sbjct: 70  DLTSNVGTKRGKGSGLVVRAGKA-ALCLTKRSRSRKSLARTHGFRKR 115


>K4AVP3_SOLLC (tr|K4AVP3) Uncharacterized protein OS=Solanum lycopersicum
           GN=Solyc01g056780.2 PE=3 SV=1
          Length = 156

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/44 (79%), Positives = 38/44 (86%), Gaps = 1/44 (2%)

Query: 72  SNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRR 115
           SN G    KRRGLVV+A KK+ALCQTKRNRSRKSLARTHGFR+R
Sbjct: 81  SNIGVSTTKRRGLVVQA-KKYALCQTKRNRSRKSLARTHGFRKR 123


>M1BXS6_SOLTU (tr|M1BXS6) Uncharacterized protein OS=Solanum tuberosum
           GN=PGSC0003DMG400021493 PE=3 SV=1
          Length = 156

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/43 (79%), Positives = 37/43 (86%), Gaps = 1/43 (2%)

Query: 73  NAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRR 115
           N G    KRRGLVV+A KK+ALCQTKRNRSRKSLARTHGFR+R
Sbjct: 82  NIGVSTTKRRGLVVQA-KKYALCQTKRNRSRKSLARTHGFRKR 123


>I1M1U7_SOYBN (tr|I1M1U7) Ribosomal protein L34 OS=Glycine max PE=3 SV=1
          Length = 146

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/47 (76%), Positives = 38/47 (80%), Gaps = 1/47 (2%)

Query: 69  DLISNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRR 115
           DL SN GT  GK  GLVVRAGK  ALC TKR+RSRKSLARTHGFR+R
Sbjct: 70  DLTSNVGTRRGKGSGLVVRAGKA-ALCLTKRSRSRKSLARTHGFRKR 115


>I1MER5_SOYBN (tr|I1MER5) Ribosomal protein L34 OS=Glycine max PE=3 SV=1
          Length = 146

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/47 (76%), Positives = 38/47 (80%), Gaps = 1/47 (2%)

Query: 69  DLISNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRR 115
           DL SN GT  GK  GLVVRAGK  ALC TKR+RSRKSLARTHGFR+R
Sbjct: 70  DLTSNFGTRRGKGSGLVVRAGKA-ALCLTKRSRSRKSLARTHGFRKR 115


>B9S989_RICCO (tr|B9S989) Ribosomal protein L34 OS=Ricinus communis
           GN=RCOM_1014630 PE=3 SV=1
          Length = 161

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/47 (76%), Positives = 38/47 (80%), Gaps = 1/47 (2%)

Query: 69  DLISNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRR 115
           DL S+ G   G+  GLVVRAGK  ALCQTKRNRSRKSLARTHGFRRR
Sbjct: 83  DLNSSTGVRKGRGYGLVVRAGK-AALCQTKRNRSRKSLARTHGFRRR 128


>C6T2Q1_SOYBN (tr|C6T2Q1) Ribosomal protein L34 OS=Glycine max PE=2 SV=1
          Length = 146

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/47 (76%), Positives = 38/47 (80%), Gaps = 1/47 (2%)

Query: 69  DLISNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRR 115
           DL SN GT  GK  GLVVRAGK  ALC TKR+RSRKSLARTHGFR+R
Sbjct: 70  DLTSNFGTRRGKGSGLVVRAGKA-ALCLTKRSRSRKSLARTHGFRKR 115


>D7TJJ7_VITVI (tr|D7TJJ7) Ribosomal protein L34 OS=Vitis vinifera
           GN=VIT_10s0003g01080 PE=3 SV=1
          Length = 113

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/47 (74%), Positives = 37/47 (78%), Gaps = 1/47 (2%)

Query: 69  DLISNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRR 115
           DL S+ G    +  GLVVRAGK  ALCQTKRNRSRKSLARTHGFRRR
Sbjct: 35  DLNSSVGVRKERGHGLVVRAGKA-ALCQTKRNRSRKSLARTHGFRRR 80


>A5AGC2_VITVI (tr|A5AGC2) Ribosomal protein L34 OS=Vitis vinifera
           GN=VITISV_036402 PE=3 SV=1
          Length = 148

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/47 (74%), Positives = 37/47 (78%), Gaps = 1/47 (2%)

Query: 69  DLISNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRR 115
           DL S+ G    +  GLVVRAGK  ALCQTKRNRSRKSLARTHGFRRR
Sbjct: 70  DLNSSVGVRKERGHGLVVRAGKA-ALCQTKRNRSRKSLARTHGFRRR 115


>D7KDQ0_ARALL (tr|D7KDQ0) Ribosomal protein L34 family protein OS=Arabidopsis
           lyrata subsp. lyrata GN=ARALYDRAFT_473113 PE=3 SV=1
          Length = 159

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/48 (75%), Positives = 38/48 (79%), Gaps = 2/48 (4%)

Query: 69  DLISNAGTGNGKR-RGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRR 115
           DL S     N +R RGLVVRAGK  ALCQTKR+RSRKSLARTHGFRRR
Sbjct: 80  DLSSQTSGLNSQRHRGLVVRAGKA-ALCQTKRSRSRKSLARTHGFRRR 126


>M4D2Z9_BRARP (tr|M4D2Z9) Uncharacterized protein OS=Brassica rapa subsp.
           pekinensis GN=Bra010852 PE=3 SV=1
          Length = 161

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/49 (75%), Positives = 39/49 (79%), Gaps = 3/49 (6%)

Query: 69  DLISNA--GTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRR 115
           DL S A  G  + KRRGLVVRAGK  ALCQTKR+RSRKSLARTHGFR R
Sbjct: 81  DLSSGASGGLNSQKRRGLVVRAGKA-ALCQTKRSRSRKSLARTHGFRLR 128


>M4FI44_BRARP (tr|M4FI44) Uncharacterized protein OS=Brassica rapa subsp.
           pekinensis GN=Bra040773 PE=3 SV=1
          Length = 165

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/48 (77%), Positives = 38/48 (79%), Gaps = 2/48 (4%)

Query: 69  DLISNAGTGNG-KRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRR 115
           DL S     NG KRRGLVVRAGK  ALCQTKR+RSRKSLARTHGFR R
Sbjct: 86  DLSSGTSGLNGQKRRGLVVRAGKA-ALCQTKRSRSRKSLARTHGFRLR 132


>R0GK25_9BRAS (tr|R0GK25) Uncharacterized protein OS=Capsella rubella
           GN=CARUB_v10010533mg PE=4 SV=1
          Length = 156

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/48 (75%), Positives = 38/48 (79%), Gaps = 2/48 (4%)

Query: 69  DLISNAGTGNGKRR-GLVVRAGKKFALCQTKRNRSRKSLARTHGFRRR 115
           DL       NG+RR GLVVRAGK  ALCQTKR+RSRKSLARTHGFRRR
Sbjct: 77  DLSGQTSGLNGQRRRGLVVRAGKA-ALCQTKRSRSRKSLARTHGFRRR 123


>B9I1N1_POPTR (tr|B9I1N1) Ribosomal protein L34 (Fragment) OS=Populus trichocarpa
           GN=POPTRDRAFT_235374 PE=3 SV=1
          Length = 131

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/47 (74%), Positives = 36/47 (76%), Gaps = 1/47 (2%)

Query: 69  DLISNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRR 115
           DL SN G      RGLVVRAGK  ALC TKR+RSRKSLARTHGFRRR
Sbjct: 55  DLNSNIGVRKDIGRGLVVRAGKA-ALCLTKRSRSRKSLARTHGFRRR 100