Miyakogusa Predicted Gene

Lj0g3v0158289.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0158289.1 Non Chatacterized Hit- tr|I1JUC2|I1JUC2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6226
PE=,53.85,0.00000000002,seg,NULL,
NODE_18479_length_243_cov_296.135803.path1.1
         (90 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I1K8U2_SOYBN (tr|I1K8U2) Uncharacterized protein OS=Glycine max ...    69   8e-10
I1JUC2_SOYBN (tr|I1JUC2) Uncharacterized protein OS=Glycine max ...    65   8e-09
R0HN52_9BRAS (tr|R0HN52) Uncharacterized protein (Fragment) OS=C...    59   9e-07

>I1K8U2_SOYBN (tr|I1K8U2) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 641

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/52 (63%), Positives = 40/52 (76%), Gaps = 2/52 (3%)

Query: 40  NFRSPPYEYESGGFRGESGYGNNGMRRTRSFGDMTETAGREDNNKKV-VTPL 90
           NF+SPPYEY  G FRGE  YG NGMR+TRS+GDM+E+ GR +  + V VTPL
Sbjct: 177 NFQSPPYEYGGGEFRGEGAYG-NGMRKTRSYGDMSESVGRGEEKRVVSVTPL 227


>I1JUC2_SOYBN (tr|I1JUC2) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 652

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 51/91 (56%), Gaps = 7/91 (7%)

Query: 1   MMLFDRKXXXXXXXXXXXXXXXXXXXXXXXXDDRFGGRDNFRSPPYEYESGGFRGESGYG 60
           +MLFDRK                        DDRFGGRDNF+SPPYEY  GG     G  
Sbjct: 152 LMLFDRKSTAASYGGGAGSVGGGGS------DDRFGGRDNFQSPPYEYGGGGEFRGEGGY 205

Query: 61  NNGMRRTRSFGDMTETAGREDNNKKV-VTPL 90
            NGMR+TRS+GDM+E+ GR +  + V VTPL
Sbjct: 206 GNGMRKTRSYGDMSESVGRGEEKRVVSVTPL 236


>R0HN52_9BRAS (tr|R0HN52) Uncharacterized protein (Fragment) OS=Capsella rubella
           GN=CARUB_v10022748mg PE=4 SV=1
          Length = 707

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 8/66 (12%)

Query: 32  DDRFG-GRDNFRSPP---YEYESGG--FRGES-GYGNNGMRRTRSFGDMTETAGREDNNK 84
           DDR+G GRD+FRSPP   Y+YE+GG  FRG+S GYG    +R+RS+GDMTE  G   + K
Sbjct: 236 DDRYGRGRDDFRSPPPRSYDYENGGGDFRGDSNGYGGVP-KRSRSYGDMTEMGGGGRDEK 294

Query: 85  KVVTPL 90
           K VTPL
Sbjct: 295 KSVTPL 300