Miyakogusa Predicted Gene

Lj0g3v0157729.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0157729.1 Non Chatacterized Hit- tr|G1LQM4|G1LQM4_AILME
Uncharacterized protein (Fragment) OS=Ailuropoda melan,40.82,1.6,
,CUFF.9777.1
         (117 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3STR0_LOTJA (tr|I3STR0) Uncharacterized protein OS=Lotus japoni...   184   8e-45

>I3STR0_LOTJA (tr|I3STR0) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
          Length = 99

 Score =  184 bits (468), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 99/117 (84%), Positives = 99/117 (84%), Gaps = 18/117 (15%)

Query: 1   MSLLYQFQFLSTFYYSMSLSNFCPCSQFNFHRFTPSVPHLTSPTVPPLHPLMTHPRFSLL 60
           MSLLYQFQFLSTFYYSMSLSNFCPCSQFNFHRFTPSVPHLTSPTVPPLHPLMT       
Sbjct: 1   MSLLYQFQFLSTFYYSMSLSNFCPCSQFNFHRFTPSVPHLTSPTVPPLHPLMT------- 53

Query: 61  IHPPPSAASLPHLTHSHSFSDTQTQPNPLPLQITDSQSQRFFTSQREREQAMKQSME 117
                      HLTHSHSFSDTQTQPNPLPLQITDSQSQRFFTSQREREQAMKQSME
Sbjct: 54  -----------HLTHSHSFSDTQTQPNPLPLQITDSQSQRFFTSQREREQAMKQSME 99