Miyakogusa Predicted Gene

Lj0g3v0157289.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0157289.1 tr|G7KPW4|G7KPW4_MEDTR Lin-54-like protein
OS=Medicago truncatula GN=MTR_6g087590 PE=4
SV=1,51.18,1e-17,seg,NULL,CUFF.9718.1
         (113 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K7L4S4_SOYBN (tr|K7L4S4) Uncharacterized protein OS=Glycine max ...    69   4e-10
I1KQ07_SOYBN (tr|I1KQ07) Uncharacterized protein OS=Glycine max ...    69   4e-10
K7KRN8_SOYBN (tr|K7KRN8) Uncharacterized protein OS=Glycine max ...    55   7e-06

>K7L4S4_SOYBN (tr|K7L4S4) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 551

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 49/112 (43%), Gaps = 20/112 (17%)

Query: 2   GEGEGGDCAPANVPXXXXXXXXXXXXXXLDAPAKKLARQLDFTALSEXXXXXXXXXXXXX 61
           GE EG D AP NV                D PAKKLARQLDFT                 
Sbjct: 4   GEAEGSDGAPKNV---VANDVVANALLPFDVPAKKLARQLDFTGFG-------------- 46

Query: 62  XXXXXXXXXXXXXXXXXXXXXXXXVRVGKPESPKSKPRPNFEIKEATPKKQK 113
                                   VRVGKPESPKS+PRP FEIKEATPKKQK
Sbjct: 47  ---GMSTTPQPQPPVVLPLRPSTSVRVGKPESPKSRPRPGFEIKEATPKKQK 95


>I1KQ07_SOYBN (tr|I1KQ07) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 495

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 49/112 (43%), Gaps = 20/112 (17%)

Query: 2   GEGEGGDCAPANVPXXXXXXXXXXXXXXLDAPAKKLARQLDFTALSEXXXXXXXXXXXXX 61
           GE EG D AP NV                D PAKKLARQLDFT                 
Sbjct: 4   GEAEGSDGAPKNV---VANDVVANALLPFDVPAKKLARQLDFTGFG-------------- 46

Query: 62  XXXXXXXXXXXXXXXXXXXXXXXXVRVGKPESPKSKPRPNFEIKEATPKKQK 113
                                   VRVGKPESPKS+PRP FEIKEATPKKQK
Sbjct: 47  ---GMSTTPQPQPPVVLPLRPSTSVRVGKPESPKSRPRPGFEIKEATPKKQK 95


>K7KRN8_SOYBN (tr|K7KRN8) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 514

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/28 (92%), Positives = 27/28 (96%)

Query: 86  VRVGKPESPKSKPRPNFEIKEATPKKQK 113
           VRVGKPESPKS+PRP FEIKEATPKKQK
Sbjct: 19  VRVGKPESPKSRPRPGFEIKEATPKKQK 46