Miyakogusa Predicted Gene

Lj0g3v0152109.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0152109.3 tr|G7KVF5|G7KVF5_MEDTR Homeobox-leucine zipper
protein HOX27 OS=Medicago truncatula GN=MTR_7g093430 ,45,0.000002,
,CUFF.9379.3
         (52 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K7MYG7_SOYBN (tr|K7MYG7) Uncharacterized protein OS=Glycine max ...    56   5e-06

>K7MYG7_SOYBN (tr|K7MYG7) Uncharacterized protein OS=Glycine max PE=3 SV=1
          Length = 292

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 39/69 (56%), Gaps = 23/69 (33%)

Query: 1  MELALSLGDTPKPFT--------------------SPDPPVQLNLLPFTPVQRSQPSSYL 40
          MELALSLGDTPKPF+                    S DPPVQL+LLP TPV    PSS L
Sbjct: 1  MELALSLGDTPKPFSLPAKNDSVSFKIALGDDKRVSSDPPVQLDLLPSTPV---LPSSRL 57

Query: 41 QIPWLNQPF 49
          +IPWL+   
Sbjct: 58 RIPWLSDAL 66