Miyakogusa Predicted Gene

Lj0g3v0131979.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0131979.1 tr|G7J2Y0|G7J2Y0_MEDTR TMV resistance protein N
OS=Medicago truncatula GN=MTR_3g072140 PE=4
SV=1,51.55,5e-17,seg,NULL,CUFF.8028.1
         (97 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7J2Y0_MEDTR (tr|G7J2Y0) TMV resistance protein N OS=Medicago tr...    62   7e-08
G7L9E6_MEDTR (tr|G7L9E6) TMV resistance protein N OS=Medicago tr...    59   5e-07
A2Q6C2_MEDTR (tr|A2Q6C2) TIR OS=Medicago truncatula GN=MtrDRAFT_...    57   2e-06
G7KYW5_MEDTR (tr|G7KYW5) TMV resistance protein N OS=Medicago tr...    57   2e-06
G7JY83_MEDTR (tr|G7JY83) TMV resistance protein N OS=Medicago tr...    57   2e-06

>G7J2Y0_MEDTR (tr|G7J2Y0) TMV resistance protein N OS=Medicago truncatula
           GN=MTR_3g072140 PE=4 SV=1
          Length = 868

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXXXXXXXXXXXXVMIQCHSEIQLTQE 60
           M+PTMN LPR+   G+M+ SL SI++                    V +QC S+IQLTQE
Sbjct: 577 MSPTMNSLPRVSTFGNMAFSLTSINVHNVGFLSPVIKSLSQLRT--VWVQCRSKIQLTQE 634

Query: 61  SRRILDDQYDVN 72
            RRIL  QYD N
Sbjct: 635 LRRILGGQYDAN 646


>G7L9E6_MEDTR (tr|G7L9E6) TMV resistance protein N OS=Medicago truncatula
           GN=MTR_8g073730 PE=4 SV=1
          Length = 1084

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 39/72 (54%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXXXXXXXXXXXXVMIQCHSEIQLTQE 60
           M+PT+N L  I      SLSLVS+D++                   V +QCHSE QLTQE
Sbjct: 764 MSPTINSLSLIHPFAGNSLSLVSLDVESNNMDYQSPMLTVLSKLRCVWVQCHSENQLTQE 823

Query: 61  SRRILDDQYDVN 72
            RR +DD YDVN
Sbjct: 824 LRRFIDDLYDVN 835


>A2Q6C2_MEDTR (tr|A2Q6C2) TIR OS=Medicago truncatula GN=MtrDRAFT_AC174467g12v1
           PE=4 SV=1
          Length = 1054

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 40/78 (51%), Gaps = 6/78 (7%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXX------XXXXXXXXXXVMIQCHSE 54
           M+PT+N LPRIP  G M LSLVS+D++                           +QC S 
Sbjct: 774 MSPTINSLPRIPPFGGMPLSLVSLDLENNNNNNNNNLSCLVPKLNSFSELRSFRVQCQSM 833

Query: 55  IQLTQESRRILDDQYDVN 72
           IQLT+E RR LDD YD N
Sbjct: 834 IQLTRELRRFLDDLYDAN 851


>G7KYW5_MEDTR (tr|G7KYW5) TMV resistance protein N OS=Medicago truncatula
           GN=MTR_7g025250 PE=4 SV=1
          Length = 1093

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 40/78 (51%), Gaps = 6/78 (7%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXX------XXXXXXXXXXVMIQCHSE 54
           M+PT+N LPRIP  G M LSLVS+D++                           +QC S 
Sbjct: 774 MSPTINSLPRIPPFGGMPLSLVSLDLENNNNNNNNNLSCLVPKLNSFSELRSFRVQCQSM 833

Query: 55  IQLTQESRRILDDQYDVN 72
           IQLT+E RR LDD YD N
Sbjct: 834 IQLTRELRRFLDDLYDAN 851


>G7JY83_MEDTR (tr|G7JY83) TMV resistance protein N OS=Medicago truncatula
           GN=MTR_5g047530 PE=4 SV=1
          Length = 1047

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 37/72 (51%)

Query: 1   MAPTMNPLPRIPLLGSMSLSLVSIDIQXXXXXXXXXXXXXXXXXXXVMIQCHSEIQLTQE 60
           M+PT N L  +      SLSLVS+D++                   V  QCHSE QLTQE
Sbjct: 765 MSPTRNSLSHVFPFAGNSLSLVSLDVESNNMDYQSPMVTVLSKLRCVWFQCHSENQLTQE 824

Query: 61  SRRILDDQYDVN 72
            RR +DD YDVN
Sbjct: 825 LRRFIDDLYDVN 836