Miyakogusa Predicted Gene

Lj0g3v0126989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0126989.1 Non Chatacterized Hit- tr|B9FBZ9|B9FBZ9_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,62.34,1e-16,seg,NULL; Patched,Patched; NIEMANN-PICK C1,NULL;
PATCHED-RELATED,NULL; SSD,Sterol-sensing domain,CUFF.7670.1
         (92 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7KFF1_MEDTR (tr|G7KFF1) Niemann-Pick C1 protein OS=Medicago tru...    61   1e-07
K7KBT5_SOYBN (tr|K7KBT5) Uncharacterized protein OS=Glycine max ...    58   1e-06
K7M448_SOYBN (tr|K7M448) Uncharacterized protein OS=Glycine max ...    56   4e-06
K7M447_SOYBN (tr|K7M447) Uncharacterized protein OS=Glycine max ...    56   4e-06
K7M449_SOYBN (tr|K7M449) Uncharacterized protein OS=Glycine max ...    56   4e-06

>G7KFF1_MEDTR (tr|G7KFF1) Niemann-Pick C1 protein OS=Medicago truncatula
           GN=MTR_5g099070 PE=4 SV=1
          Length = 1568

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/33 (90%), Positives = 31/33 (93%)

Query: 26  TADIITILVSYIVMFAYISVTLGDTPPRLSSFY 58
           TAD+ITILVSYIVMFAYISVTLGDTP  LSSFY
Sbjct: 713 TADVITILVSYIVMFAYISVTLGDTPHHLSSFY 745


>K7KBT5_SOYBN (tr|K7KBT5) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 1268

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/33 (84%), Positives = 30/33 (90%)

Query: 26  TADIITILVSYIVMFAYISVTLGDTPPRLSSFY 58
           TAD+ITILVSYIVMFAYISVTLGDTPP  S F+
Sbjct: 614 TADVITILVSYIVMFAYISVTLGDTPPHPSFFF 646


>K7M448_SOYBN (tr|K7M448) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 1281

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/33 (81%), Positives = 29/33 (87%)

Query: 26  TADIITILVSYIVMFAYISVTLGDTPPRLSSFY 58
           TAD+ITILVSYIVMFAYISVTLGD PP  SS +
Sbjct: 608 TADVITILVSYIVMFAYISVTLGDRPPHPSSLF 640


>K7M447_SOYBN (tr|K7M447) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 1284

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/33 (81%), Positives = 29/33 (87%)

Query: 26  TADIITILVSYIVMFAYISVTLGDTPPRLSSFY 58
           TAD+ITILVSYIVMFAYISVTLGD PP  SS +
Sbjct: 611 TADVITILVSYIVMFAYISVTLGDRPPHPSSLF 643


>K7M449_SOYBN (tr|K7M449) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 1146

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/33 (81%), Positives = 29/33 (87%)

Query: 26  TADIITILVSYIVMFAYISVTLGDTPPRLSSFY 58
           TAD+ITILVSYIVMFAYISVTLGD PP  SS +
Sbjct: 473 TADVITILVSYIVMFAYISVTLGDRPPHPSSLF 505