Miyakogusa Predicted Gene
- Lj0g3v0122989.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0122989.1 tr|I1MT00|I1MT00_SOYBN DNA-directed RNA
polymerase OS=Glycine max GN=Gma.48961 PE=3
SV=1,79.72,0,RNA_POL_PHAGE_2,DNA-directed RNA polymerase, phage-type;
RNA_POL_PHAGE_1,DNA-directed RNA polymerase,CUFF.7423.1
(732 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
K7KWI1_SOYBN (tr|K7KWI1) DNA-directed RNA polymerase OS=Glycine ... 1219 0.0
K7MKB9_SOYBN (tr|K7MKB9) DNA-directed RNA polymerase OS=Glycine ... 1143 0.0
I1MT00_SOYBN (tr|I1MT00) DNA-directed RNA polymerase OS=Glycine ... 1141 0.0
M5VSV3_PRUPE (tr|M5VSV3) Uncharacterized protein OS=Prunus persi... 1124 0.0
B9IMA6_POPTR (tr|B9IMA6) DNA-directed RNA polymerase OS=Populus ... 1095 0.0
F6HYL3_VITVI (tr|F6HYL3) DNA-directed RNA polymerase OS=Vitis vi... 1087 0.0
B9HB51_POPTR (tr|B9HB51) DNA-directed RNA polymerase OS=Populus ... 1071 0.0
Q52GZ3_SPIOL (tr|Q52GZ3) DNA-directed RNA polymerase OS=Spinacia... 1022 0.0
M4FDQ9_BRARP (tr|M4FDQ9) DNA-directed RNA polymerase OS=Brassica... 1017 0.0
R0HH96_9BRAS (tr|R0HH96) Uncharacterized protein OS=Capsella rub... 1014 0.0
D7LGR7_ARALL (tr|D7LGR7) DNA-directed RNA polymerase OS=Arabidop... 1011 0.0
Q0WN04_ARATH (tr|Q0WN04) DNA-directed RNA polymerase OS=Arabidop... 1009 0.0
F4INQ5_ARATH (tr|F4INQ5) DNA-directed RNA polymerase OS=Arabidop... 1007 0.0
K4CB64_SOLLC (tr|K4CB64) DNA-directed RNA polymerase OS=Solanum ... 1003 0.0
M0S096_MUSAM (tr|M0S096) DNA-directed RNA polymerase OS=Musa acu... 967 0.0
M4ETI9_BRARP (tr|M4ETI9) Uncharacterized protein OS=Brassica rap... 966 0.0
B9SQY6_RICCO (tr|B9SQY6) DNA-directed RNA polymerase 3B, chlorop... 965 0.0
E1V2K4_NUPAD (tr|E1V2K4) DNA-directed RNA polymerase OS=Nuphar a... 940 0.0
E1V2U0_NUPAD (tr|E1V2U0) DNA-directed RNA polymerase OS=Nuphar a... 929 0.0
Q6K326_ORYSJ (tr|Q6K326) DNA-directed RNA polymerase OS=Oryza sa... 918 0.0
I1PIF4_ORYGL (tr|I1PIF4) DNA-directed RNA polymerase OS=Oryza gl... 917 0.0
B9G2A5_ORYSJ (tr|B9G2A5) DNA-directed RNA polymerase OS=Oryza sa... 917 0.0
Q84LK6_ORYSJ (tr|Q84LK6) DNA-directed RNA polymerase OS=Oryza sa... 916 0.0
F6HGF2_VITVI (tr|F6HGF2) DNA-directed RNA polymerase OS=Vitis vi... 914 0.0
M0SIH8_MUSAM (tr|M0SIH8) DNA-directed RNA polymerase OS=Musa acu... 913 0.0
J3MVS3_ORYBR (tr|J3MVS3) DNA-directed RNA polymerase OS=Oryza br... 910 0.0
D7SML3_VITVI (tr|D7SML3) DNA-directed RNA polymerase OS=Vitis vi... 904 0.0
K3ZQE4_SETIT (tr|K3ZQE4) DNA-directed RNA polymerase OS=Setaria ... 900 0.0
B9HIV5_POPTR (tr|B9HIV5) DNA-directed RNA polymerase OS=Populus ... 899 0.0
M5WQP7_PRUPE (tr|M5WQP7) Uncharacterized protein OS=Prunus persi... 897 0.0
I1IIY6_BRADI (tr|I1IIY6) DNA-directed RNA polymerase OS=Brachypo... 895 0.0
C5X2G2_SORBI (tr|C5X2G2) DNA-directed RNA polymerase OS=Sorghum ... 895 0.0
E1V2K3_NUPAD (tr|E1V2K3) DNA-directed RNA polymerase OS=Nuphar a... 895 0.0
Q41524_WHEAT (tr|Q41524) DNA-directed RNA polymerase OS=Triticum... 885 0.0
Q70XR0_HORVD (tr|Q70XR0) DNA-directed RNA polymerase OS=Hordeum ... 883 0.0
B9HWT3_POPTR (tr|B9HWT3) DNA-directed RNA polymerase OS=Populus ... 882 0.0
D7KWX3_ARALL (tr|D7KWX3) DNA-directed RNA polymerase OS=Arabidop... 882 0.0
Q9XF15_MAIZE (tr|Q9XF15) DNA-directed RNA polymerase OS=Zea mays... 882 0.0
K3XV30_SETIT (tr|K3XV30) DNA-directed RNA polymerase OS=Setaria ... 882 0.0
Q70XR1_HORVD (tr|Q70XR1) DNA-directed RNA polymerase OS=Hordeum ... 880 0.0
I1GVM2_BRADI (tr|I1GVM2) DNA-directed RNA polymerase OS=Brachypo... 880 0.0
I1GVM3_BRADI (tr|I1GVM3) DNA-directed RNA polymerase OS=Brachypo... 879 0.0
M4E430_BRARP (tr|M4E430) DNA-directed RNA polymerase OS=Brassica... 877 0.0
F4I0I3_ARATH (tr|F4I0I3) DNA-directed RNA polymerase OS=Arabidop... 876 0.0
K4BXN8_SOLLC (tr|K4BXN8) DNA-directed RNA polymerase OS=Solanum ... 875 0.0
Q84LK5_ORYSJ (tr|Q84LK5) DNA-directed RNA polymerase OS=Oryza sa... 874 0.0
Q9MQV1_WHEAT (tr|Q9MQV1) DNA-directed RNA polymerase OS=Triticum... 873 0.0
D7M7F2_ARALL (tr|D7M7F2) DNA-directed RNA polymerase OS=Arabidop... 873 0.0
K7MV39_SOYBN (tr|K7MV39) DNA-directed RNA polymerase OS=Glycine ... 873 0.0
I1Q467_ORYGL (tr|I1Q467) DNA-directed RNA polymerase OS=Oryza gl... 872 0.0
F4KB75_ARATH (tr|F4KB75) DNA-directed RNA polymerase OS=Arabidop... 872 0.0
R0HCL7_9BRAS (tr|R0HCL7) Uncharacterized protein OS=Capsella rub... 872 0.0
Q70BU3_HORVU (tr|Q70BU3) DNA-directed RNA polymerase (Fragment) ... 870 0.0
B9N7P2_POPTR (tr|B9N7P2) DNA-directed RNA polymerase OS=Populus ... 870 0.0
M5XKH1_PRUPE (tr|M5XKH1) Uncharacterized protein OS=Prunus persi... 869 0.0
K7L8U1_SOYBN (tr|K7L8U1) DNA-directed RNA polymerase OS=Glycine ... 868 0.0
R0IAI8_9BRAS (tr|R0IAI8) Uncharacterized protein OS=Capsella rub... 867 0.0
J3MGD3_ORYBR (tr|J3MGD3) DNA-directed RNA polymerase (Fragment) ... 865 0.0
Q0WWN0_ARATH (tr|Q0WWN0) DNA-directed RNA polymerase (Fragment) ... 864 0.0
A2YFP7_ORYSI (tr|A2YFP7) DNA-directed RNA polymerase OS=Oryza sa... 862 0.0
B9FQ93_ORYSJ (tr|B9FQ93) DNA-directed RNA polymerase OS=Oryza sa... 862 0.0
O82725_MAIZE (tr|O82725) DNA-directed RNA polymerase OS=Zea mays... 861 0.0
Q9SYW4_MAIZE (tr|Q9SYW4) DNA-directed RNA polymerase OS=Zea mays... 860 0.0
Q67UP6_ORYSJ (tr|Q67UP6) DNA-directed RNA polymerase OS=Oryza sa... 858 0.0
Q52GZ4_SPIOL (tr|Q52GZ4) DNA-directed RNA polymerase OS=Spinacia... 856 0.0
P93661_CHEAL (tr|P93661) DNA-directed RNA polymerase OS=Chenopod... 851 0.0
M4CJH0_BRARP (tr|M4CJH0) DNA-directed RNA polymerase OS=Brassica... 850 0.0
B4YPU8_BRAOA (tr|B4YPU8) DNA-directed RNA polymerase OS=Brassica... 850 0.0
C5Z749_SORBI (tr|C5Z749) DNA-directed RNA polymerase OS=Sorghum ... 847 0.0
Q1KUU5_9ROSI (tr|Q1KUU5) Putative uncharacterized protein OS=Cle... 846 0.0
B9RLF2_RICCO (tr|B9RLF2) DNA-directed RNA polymerase OS=Ricinus ... 846 0.0
K7L8U2_SOYBN (tr|K7L8U2) Uncharacterized protein OS=Glycine max ... 823 0.0
K7MG42_SOYBN (tr|K7MG42) DNA-directed RNA polymerase OS=Glycine ... 821 0.0
I1JWD0_SOYBN (tr|I1JWD0) DNA-directed RNA polymerase OS=Glycine ... 798 0.0
M7Z702_TRIUA (tr|M7Z702) DNA-directed RNA polymerase 3, chloropl... 778 0.0
N1R290_AEGTA (tr|N1R290) DNA-directed RNA polymerase 3, chloropl... 770 0.0
Q8L6F9_9BRYO (tr|Q8L6F9) DNA-directed RNA polymerase OS=Physcomi... 753 0.0
Q8SBD4_9BRYO (tr|Q8SBD4) DNA-directed RNA polymerase OS=Physcomi... 753 0.0
A9TL52_PHYPA (tr|A9TL52) DNA-directed RNA polymerase OS=Physcomi... 750 0.0
K4BC86_SOLLC (tr|K4BC86) DNA-directed RNA polymerase OS=Solanum ... 749 0.0
Q8SBD3_9BRYO (tr|Q8SBD3) DNA-directed RNA polymerase OS=Physcomi... 738 0.0
A9TJW1_PHYPA (tr|A9TJW1) DNA-directed RNA polymerase OS=Physcomi... 736 0.0
G7LG75_MEDTR (tr|G7LG75) DNA-directed RNA polymerase OS=Medicago... 736 0.0
Q8L6F8_9BRYO (tr|Q8L6F8) DNA-directed RNA polymerase OS=Physcomi... 736 0.0
A2YYV2_ORYSI (tr|A2YYV2) DNA-directed RNA polymerase OS=Oryza sa... 728 0.0
M4CIH6_BRARP (tr|M4CIH6) DNA-directed RNA polymerase OS=Brassica... 722 0.0
N1LJC9_9BRYO (tr|N1LJC9) DNA-dependent RNA polymerase OS=Physcom... 720 0.0
A9TJ21_PHYPA (tr|A9TJ21) DNA-directed RNA polymerase OS=Physcomi... 719 0.0
M7YL10_TRIUA (tr|M7YL10) DNA-directed RNA polymerase 2, chloropl... 713 0.0
B9T5S6_RICCO (tr|B9T5S6) DNA-directed RNA polymerase OS=Ricinus ... 705 0.0
M0XJG5_HORVD (tr|M0XJG5) Uncharacterized protein OS=Hordeum vulg... 701 0.0
B2RFX8_SELML (tr|B2RFX8) DNA-directed RNA polymerase (Precursor)... 691 0.0
D8R5B1_SELML (tr|D8R5B1) DNA-directed RNA polymerase (Fragment) ... 689 0.0
M8C8F6_AEGTA (tr|M8C8F6) DNA-directed RNA polymerase 2, chloropl... 688 0.0
M0ZLT1_SOLTU (tr|M0ZLT1) Uncharacterized protein OS=Solanum tube... 682 0.0
K7L8Z9_SOYBN (tr|K7L8Z9) Uncharacterized protein OS=Glycine max ... 660 0.0
G7KS02_MEDTR (tr|G7KS02) DNA-directed RNA polymerase OS=Medicago... 636 e-180
K7L900_SOYBN (tr|K7L900) Uncharacterized protein OS=Glycine max ... 631 e-178
K7L901_SOYBN (tr|K7L901) Uncharacterized protein OS=Glycine max ... 629 e-177
B9N1V3_POPTR (tr|B9N1V3) DNA-directed RNA polymerase OS=Populus ... 625 e-176
A6GV61_CHRMO (tr|A6GV61) DNA-directed RNA polymerase (Fragment) ... 620 e-175
M1AS01_SOLTU (tr|M1AS01) DNA-directed RNA polymerase OS=Solanum ... 618 e-174
B9N1V2_POPTR (tr|B9N1V2) Predicted protein (Fragment) OS=Populus... 548 e-153
D2VYC1_NAEGR (tr|D2VYC1) DNA-directed RNA polymerase OS=Naegleri... 462 e-127
C1EB37_MICSR (tr|C1EB37) DNA-directed RNA polymerase OS=Micromon... 458 e-126
K8F9T9_9CHLO (tr|K8F9T9) DNA-directed RNA polymerase OS=Bathycoc... 454 e-125
A4S334_OSTLU (tr|A4S334) DNA-directed RNA polymerase OS=Ostreoco... 450 e-123
Q0R0H7_9EUKA (tr|Q0R0H7) DNA-directed RNA polymerase OS=Naegleri... 449 e-123
Q2XSM7_PHYPO (tr|Q2XSM7) DNA-directed RNA polymerase OS=Physarum... 444 e-122
L8GGB1_ACACA (tr|L8GGB1) DNA-directed RNA polymerase OS=Acantham... 436 e-119
F4Q691_DICFS (tr|F4Q691) DNA-directed RNA polymerase OS=Dictyost... 429 e-117
Q0QFS5_POLPA (tr|Q0QFS5) DNA-directed RNA polymerase (Fragment) ... 428 e-117
C1MV11_MICPC (tr|C1MV11) DNA-directed RNA polymerase OS=Micromon... 425 e-116
R7SIE2_DICSQ (tr|R7SIE2) DNA/RNA polymerase OS=Dichomitus squale... 421 e-115
Q010X3_OSTTA (tr|Q010X3) DNA-directed RNA polymerase OS=Ostreoco... 419 e-114
R9ARS4_WALIC (tr|R9ARS4) Uncharacterized protein OS=Wallemia ich... 417 e-113
D3B0H1_POLPA (tr|D3B0H1) DNA-directed RNA polymerase OS=Polyspho... 417 e-113
K5W1S5_PHACS (tr|K5W1S5) DNA-directed RNA polymerase OS=Phaneroc... 417 e-113
D8QFG3_SCHCM (tr|D8QFG3) DNA-directed RNA polymerase OS=Schizoph... 415 e-113
F0XZ85_AURAN (tr|F0XZ85) DNA-directed RNA polymerase OS=Aureococ... 413 e-112
J4I8Q3_FIBRA (tr|J4I8Q3) DNA-directed RNA polymerase OS=Fibropor... 413 e-112
J5QJ77_TRIAS (tr|J5QJ77) DNA-directed RNA polymerase OS=Trichosp... 412 e-112
K1VKV7_TRIAC (tr|K1VKV7) DNA-directed RNA polymerase OS=Trichosp... 412 e-112
M1V872_CYAME (tr|M1V872) DNA-directed RNA polymerase OS=Cyanidio... 410 e-112
F0WKU6_9STRA (tr|F0WKU6) DNA-directed RNA polymerase OS=Albugo l... 410 e-112
F0ZVB9_DICPU (tr|F0ZVB9) DNA-directed RNA polymerase OS=Dictyost... 409 e-111
F8QAA1_SERL3 (tr|F8QAA1) DNA-directed RNA polymerase OS=Serpula ... 408 e-111
Q95NZ8_DICDI (tr|Q95NZ8) DNA-directed RNA polymerase OS=Dictyost... 408 e-111
K3WD80_PYTUL (tr|K3WD80) DNA-directed RNA polymerase OS=Pythium ... 407 e-111
F8P940_SERL9 (tr|F8P940) DNA-directed RNA polymerase OS=Serpula ... 405 e-110
I4Y5J6_WALSC (tr|I4Y5J6) DNA-directed RNA polymerase OS=Wallemia... 404 e-110
E1ZQB5_CHLVA (tr|E1ZQB5) DNA-directed RNA polymerase OS=Chlorell... 402 e-109
L8X0B4_9HOMO (tr|L8X0B4) DNA-directed RNA polymerase OS=Rhizocto... 399 e-108
A7ETG7_SCLS1 (tr|A7ETG7) DNA-directed RNA polymerase OS=Scleroti... 399 e-108
Q0QFS6_VERVE (tr|Q0QFS6) DNA-directed RNA polymerase OS=Vermamoe... 399 e-108
D2KCB6_9TREE (tr|D2KCB6) DNA-directed RNA polymerase OS=Kwoniell... 398 e-108
Q6TGI7_CRYGA (tr|Q6TGI7) DNA-directed RNA polymerase OS=Cryptoco... 398 e-108
Q5Y265_CRYGA (tr|Q5Y265) DNA-directed RNA polymerase OS=Cryptoco... 397 e-108
F6KJN3_CRYGA (tr|F6KJN3) DNA-directed RNA polymerase OS=Cryptoco... 397 e-108
Q0QFR1_ACACA (tr|Q0QFR1) DNA-directed RNA polymerase (Fragment) ... 397 e-108
I0YZI0_9CHLO (tr|I0YZI0) DNA-directed RNA polymerase OS=Coccomyx... 397 e-107
Q8J0W4_CRYNE (tr|Q8J0W4) DNA-directed RNA polymerase OS=Cryptoco... 397 e-107
Q5KHP0_CRYNJ (tr|Q5KHP0) DNA-directed RNA polymerase OS=Cryptoco... 397 e-107
F5HEC6_CRYNB (tr|F5HEC6) DNA-directed RNA polymerase OS=Cryptoco... 397 e-107
F6KJR6_CRYGA (tr|F6KJR6) DNA-directed RNA polymerase OS=Cryptoco... 396 e-107
Q8J0Y5_CRYNE (tr|Q8J0Y5) DNA-directed RNA polymerase OS=Cryptoco... 396 e-107
Q5KHN9_CRYNJ (tr|Q5KHN9) DNA-directed RNA polymerase OS=Cryptoco... 396 e-107
F5HH15_CRYNB (tr|F5HH15) DNA-directed RNA polymerase OS=Cryptoco... 396 e-107
Q4PBM0_USTMA (tr|Q4PBM0) DNA-directed RNA polymerase OS=Ustilago... 395 e-107
Q8J122_CRYNV (tr|Q8J122) DNA-directed RNA polymerase OS=Cryptoco... 394 e-107
J9VMK4_CRYNH (tr|J9VMK4) DNA-directed RNA polymerase OS=Cryptoco... 394 e-107
Q8J0Z4_CRYNV (tr|Q8J0Z4) DNA-directed RNA polymerase OS=Cryptoco... 394 e-107
Q5Y227_CRYGA (tr|Q5Y227) DNA-directed RNA polymerase OS=Cryptoco... 393 e-106
E6RBT1_CRYGW (tr|E6RBT1) DNA-directed RNA polymerase OS=Cryptoco... 393 e-106
M7TT85_BOTFU (tr|M7TT85) Putative mitochondrial dna-directed rna... 392 e-106
G2YM53_BOTF4 (tr|G2YM53) DNA-directed RNA polymerase OS=Botryoti... 392 e-106
L1K266_GUITH (tr|L1K266) DNA-directed RNA polymerase OS=Guillard... 392 e-106
G0T0Q4_RHOG2 (tr|G0T0Q4) DNA-directed RNA polymerase OS=Rhodotor... 392 e-106
N1J6V7_ERYGR (tr|N1J6V7) Mitochondrial RNA polymerase OS=Blumeri... 392 e-106
C4JDA6_UNCRE (tr|C4JDA6) DNA-directed RNA polymerase OS=Uncinoca... 391 e-106
Q0QFS1_9EUKA (tr|Q0QFS1) DNA-directed RNA polymerase (Fragment) ... 391 e-106
M9LQH4_9BASI (tr|M9LQH4) Mitochondrial/chloroplast DNA-directed ... 391 e-106
M7NPE9_9ASCO (tr|M7NPE9) Uncharacterized protein OS=Pneumocystis... 390 e-105
M7X8Y2_RHOTO (tr|M7X8Y2) Mitochondrial RNA polymerase OS=Rhodosp... 390 e-105
D0NEZ4_PHYIT (tr|D0NEZ4) DNA-directed RNA polymerase OS=Phytopht... 389 e-105
E9D5Y0_COCPS (tr|E9D5Y0) DNA-directed RNA polymerase OS=Coccidio... 389 e-105
C5PEM0_COCP7 (tr|C5PEM0) DNA-directed RNA polymerase OS=Coccidio... 389 e-105
J3KGM2_COCIM (tr|J3KGM2) DNA-directed RNA polymerase OS=Coccidio... 389 e-105
R9PAX2_9BASI (tr|R9PAX2) Uncharacterized protein OS=Pseudozyma h... 389 e-105
H0GU88_9SACH (tr|H0GU88) DNA-directed RNA polymerase OS=Saccharo... 387 e-105
H0GFK8_9SACH (tr|H0GFK8) DNA-directed RNA polymerase OS=Saccharo... 387 e-105
I1CN36_RHIO9 (tr|I1CN36) DNA-directed RNA polymerase OS=Rhizopus... 386 e-104
B6K333_SCHJY (tr|B6K333) DNA-directed RNA polymerase OS=Schizosa... 386 e-104
G0S6Z1_CHATD (tr|G0S6Z1) DNA-directed RNA polymerase OS=Chaetomi... 386 e-104
H2ASJ8_KAZAF (tr|H2ASJ8) DNA-directed RNA polymerase OS=Kazachst... 385 e-104
I2H7D3_TETBL (tr|I2H7D3) DNA-directed RNA polymerase OS=Tetrapis... 385 e-104
G0WE72_NAUDC (tr|G0WE72) DNA-directed RNA polymerase OS=Naumovoz... 385 e-104
Q6FLX9_CANGA (tr|Q6FLX9) DNA-directed RNA polymerase OS=Candida ... 385 e-104
N1P4I3_YEASX (tr|N1P4I3) Rpo41p OS=Saccharomyces cerevisiae CEN.... 384 e-104
G2WDA5_YEASK (tr|G2WDA5) DNA-directed RNA polymerase OS=Saccharo... 384 e-104
A7A203_YEAS7 (tr|A7A203) DNA-directed RNA polymerase OS=Saccharo... 384 e-104
C8Z7P6_YEAS8 (tr|C8Z7P6) DNA-directed RNA polymerase OS=Saccharo... 384 e-104
C7GY77_YEAS2 (tr|C7GY77) DNA-directed RNA polymerase OS=Saccharo... 384 e-104
B3LUH5_YEAS1 (tr|B3LUH5) DNA-directed RNA polymerase OS=Saccharo... 384 e-104
H3HE68_PHYRM (tr|H3HE68) DNA-directed RNA polymerase OS=Phytopht... 384 e-104
B0D7Q9_LACBS (tr|B0D7Q9) DNA-directed RNA polymerase (Fragment) ... 383 e-103
E6ZVI0_SPORE (tr|E6ZVI0) DNA-directed RNA polymerase OS=Sporisor... 383 e-103
I2FMF3_USTH4 (tr|I2FMF3) DNA-directed RNA polymerase OS=Ustilago... 382 e-103
D2JWV0_9TREE (tr|D2JWV0) DNA-directed RNA polymerase OS=Filobasi... 382 e-103
M2R3M4_CERSU (tr|M2R3M4) DNA-directed RNA polymerase OS=Ceripori... 382 e-103
J8PP58_SACAR (tr|J8PP58) DNA-directed RNA polymerase OS=Saccharo... 382 e-103
C5FXP3_ARTOC (tr|C5FXP3) DNA-directed RNA polymerase OS=Arthrode... 381 e-103
C5DNP3_LACTC (tr|C5DNP3) DNA-directed RNA polymerase OS=Lachance... 379 e-102
D7FQU5_ECTSI (tr|D7FQU5) DNA-directed RNA polymerase OS=Ectocarp... 379 e-102
Q6CRZ5_KLULA (tr|Q6CRZ5) DNA-directed RNA polymerase OS=Kluyvero... 379 e-102
M5EA10_MALSM (tr|M5EA10) Genomic scaffold, msy_sf_10 OS=Malassez... 378 e-102
A8QAZ2_MALGO (tr|A8QAZ2) DNA-directed RNA polymerase OS=Malassez... 377 e-102
B7GAR5_PHATC (tr|B7GAR5) DNA-directed RNA polymerase OS=Phaeodac... 377 e-102
J7S7Y3_KAZNA (tr|J7S7Y3) DNA-directed RNA polymerase OS=Kazachst... 377 e-101
M2X4M7_GALSU (tr|M2X4M7) DNA-directed RNA polymerase OS=Galdieri... 376 e-101
D4B1W3_ARTBC (tr|D4B1W3) DNA-directed RNA polymerase OS=Arthrode... 376 e-101
G8ZR00_TORDC (tr|G8ZR00) DNA-directed RNA polymerase OS=Torulasp... 376 e-101
G1PD86_MYOLU (tr|G1PD86) DNA-directed RNA polymerase OS=Myotis l... 376 e-101
L8G2U5_GEOD2 (tr|L8G2U5) DNA-directed RNA polymerase OS=Geomyces... 376 e-101
G1WZ24_ARTOA (tr|G1WZ24) DNA-directed RNA polymerase OS=Arthrobo... 375 e-101
F2Q2T9_TRIEC (tr|F2Q2T9) DNA-directed RNA polymerase OS=Trichoph... 375 e-101
E4UVQ3_ARTGP (tr|E4UVQ3) DNA-directed RNA polymerase OS=Arthrode... 375 e-101
F2SGD5_TRIRC (tr|F2SGD5) DNA-directed RNA polymerase OS=Trichoph... 375 e-101
F7FG73_MONDO (tr|F7FG73) DNA-directed RNA polymerase OS=Monodelp... 375 e-101
G7E7S7_MIXOS (tr|G7E7S7) DNA-directed RNA polymerase OS=Mixia os... 375 e-101
F2RVR6_TRIT1 (tr|F2RVR6) DNA-directed RNA polymerase OS=Trichoph... 375 e-101
K5X592_AGABU (tr|K5X592) DNA-directed RNA polymerase OS=Agaricus... 375 e-101
M7TGZ3_9PEZI (tr|M7TGZ3) Putative mitochondrial dna-directed rna... 375 e-101
L5LSH4_MYODS (tr|L5LSH4) DNA-directed RNA polymerase OS=Myotis d... 374 e-101
D4DH48_TRIVH (tr|D4DH48) DNA-directed RNA polymerase OS=Trichoph... 374 e-101
K9I6L7_AGABB (tr|K9I6L7) DNA-directed RNA polymerase OS=Agaricus... 374 e-101
G0VD01_NAUCC (tr|G0VD01) DNA-directed RNA polymerase OS=Naumovoz... 373 e-100
Q75BP7_ASHGO (tr|Q75BP7) DNA-directed RNA polymerase OS=Ashbya g... 373 e-100
M9N2G7_ASHGS (tr|M9N2G7) FACR224Cp OS=Ashbya gossypii FDAG1 GN=F... 373 e-100
A8NIS4_COPC7 (tr|A8NIS4) DNA-directed RNA polymerase OS=Coprinop... 371 e-100
C5DX79_ZYGRC (tr|C5DX79) DNA-directed RNA polymerase OS=Zygosacc... 369 2e-99
C4QX83_PICPG (tr|C4QX83) DNA-directed RNA polymerase OS=Komagata... 369 2e-99
F2QMY2_PICP7 (tr|F2QMY2) DNA-directed RNA polymerase OS=Komagata... 369 2e-99
K9G2U3_PEND2 (tr|K9G2U3) DNA-directed RNA polymerase OS=Penicill... 368 4e-99
K9F8K1_PEND1 (tr|K9F8K1) DNA-directed RNA polymerase OS=Penicill... 368 4e-99
G8JMS2_ERECY (tr|G8JMS2) DNA-directed RNA polymerase OS=Eremothe... 368 4e-99
Q5AVS1_EMENI (tr|Q5AVS1) DNA-directed RNA polymerase OS=Emericel... 368 5e-99
G8Y716_PICSO (tr|G8Y716) DNA-directed RNA polymerase OS=Pichia s... 368 5e-99
G8BS54_TETPH (tr|G8BS54) DNA-directed RNA polymerase OS=Tetrapis... 367 9e-99
G2R133_THITE (tr|G2R133) DNA-directed RNA polymerase OS=Thielavi... 367 1e-98
K9IP16_DESRO (tr|K9IP16) DNA-directed RNA polymerase OS=Desmodus... 367 1e-98
H1UWP4_COLHI (tr|H1UWP4) DNA-directed RNA polymerase OS=Colletot... 367 1e-98
F0UNN0_AJEC8 (tr|F0UNN0) DNA-directed RNA polymerase OS=Ajellomy... 367 1e-98
K1X9F9_MARBU (tr|K1X9F9) DNA-directed RNA polymerase OS=Marssoni... 367 1e-98
R1GF71_9PEZI (tr|R1GF71) Putative mitochondrial dna-directed rna... 366 1e-98
M3YES8_MUSPF (tr|M3YES8) DNA-directed RNA polymerase OS=Mustela ... 365 3e-98
M5BWD9_9HOMO (tr|M5BWD9) DNA-directed RNA polymerase, mitochondr... 365 3e-98
F1PCF7_CANFA (tr|F1PCF7) DNA-directed RNA polymerase OS=Canis fa... 365 3e-98
K0KTX3_WICCF (tr|K0KTX3) DNA-directed RNA polymerase OS=Wickerha... 365 3e-98
N4VYU9_COLOR (tr|N4VYU9) DNA-directed RNA polymerase OS=Colletot... 365 3e-98
J9P8Y8_CANFA (tr|J9P8Y8) DNA-directed RNA polymerase OS=Canis fa... 365 4e-98
C6HMP3_AJECH (tr|C6HMP3) DNA-directed RNA polymerase OS=Ajellomy... 364 6e-98
Q0CV53_ASPTN (tr|Q0CV53) DNA-directed RNA polymerase OS=Aspergil... 364 6e-98
G3W635_SARHA (tr|G3W635) DNA-directed RNA polymerase (Fragment) ... 364 8e-98
D3ZYB6_RAT (tr|D3ZYB6) DNA-directed RNA polymerase OS=Rattus nor... 364 9e-98
H0WXB7_OTOGA (tr|H0WXB7) DNA-directed RNA polymerase OS=Otolemur... 363 9e-98
D5GND9_TUBMM (tr|D5GND9) DNA-directed RNA polymerase OS=Tuber me... 363 9e-98
G2QM62_THIHA (tr|G2QM62) DNA-directed RNA polymerase OS=Thielavi... 363 1e-97
B6HKC8_PENCW (tr|B6HKC8) DNA-directed RNA polymerase OS=Penicill... 363 1e-97
A6QUH4_AJECN (tr|A6QUH4) DNA-directed RNA polymerase OS=Ajellomy... 362 3e-97
B7GAR6_PHATC (tr|B7GAR6) DNA-directed RNA polymerase OS=Phaeodac... 362 3e-97
K2RJP7_MACPH (tr|K2RJP7) DNA-directed RNA polymerase OS=Macropho... 362 4e-97
C0NPG4_AJECG (tr|C0NPG4) DNA-directed RNA polymerase OS=Ajellomy... 361 5e-97
C5ME71_CANTT (tr|C5ME71) DNA-directed RNA polymerase OS=Candida ... 361 6e-97
F9F6M8_FUSOF (tr|F9F6M8) DNA-directed RNA polymerase OS=Fusarium... 361 7e-97
D8LUV8_BLAHO (tr|D8LUV8) DNA-directed RNA polymerase OS=Blastocy... 361 8e-97
C5JUP7_AJEDS (tr|C5JUP7) DNA-directed RNA polymerase OS=Ajellomy... 360 8e-97
C5GMV9_AJEDR (tr|C5GMV9) DNA-directed RNA polymerase OS=Ajellomy... 360 8e-97
F2TG61_AJEDA (tr|F2TG61) DNA-directed RNA polymerase OS=Ajellomy... 360 8e-97
H6BKV4_EXODN (tr|H6BKV4) DNA-directed RNA polymerase OS=Exophial... 360 8e-97
N1RVU8_FUSOX (tr|N1RVU8) DNA-directed RNA polymerase, mitochondr... 360 9e-97
J9N1Y6_FUSO4 (tr|J9N1Y6) DNA-directed RNA polymerase OS=Fusarium... 360 1e-96
G3B4C1_CANTC (tr|G3B4C1) DNA-directed RNA polymerase OS=Candida ... 360 1e-96
Q0QFS3_9MYCE (tr|Q0QFS3) DNA-directed RNA polymerase (Fragment) ... 360 1e-96
F7VNT9_SORMK (tr|F7VNT9) DNA-directed RNA polymerase OS=Sordaria... 360 1e-96
G5C5W3_HETGA (tr|G5C5W3) DNA-directed RNA polymerase OS=Heteroce... 360 1e-96
K6ZBI1_PANTR (tr|K6ZBI1) DNA-directed RNA polymerase OS=Pan trog... 360 2e-96
N4UNZ4_FUSOX (tr|N4UNZ4) DNA-directed RNA polymerase, mitochondr... 360 2e-96
Q59E91_HUMAN (tr|Q59E91) DNA-directed RNA polymerase (Fragment) ... 360 2e-96
C0RZR9_PARBP (tr|C0RZR9) DNA-directed RNA polymerase OS=Paracocc... 360 2e-96
G4Z814_PHYSP (tr|G4Z814) DNA-directed RNA polymerase OS=Phytopht... 360 2e-96
Q4G0F4_HUMAN (tr|Q4G0F4) DNA-directed RNA polymerase OS=Homo sap... 359 2e-96
M5FVA2_DACSP (tr|M5FVA2) DNA/RNA polymerase OS=Dacryopinax sp. (... 359 2e-96
G4UJT0_NEUT9 (tr|G4UJT0) DNA-directed RNA polymerase OS=Neurospo... 359 2e-96
F8MFL5_NEUT8 (tr|F8MFL5) DNA-directed RNA polymerase OS=Neurospo... 359 2e-96
M4ADE6_XIPMA (tr|M4ADE6) DNA-directed RNA polymerase OS=Xiphopho... 359 3e-96
Q2H1K6_CHAGB (tr|Q2H1K6) DNA-directed RNA polymerase OS=Chaetomi... 359 3e-96
K7EKS3_HUMAN (tr|K7EKS3) DNA-directed RNA polymerase OS=Homo sap... 359 3e-96
L0PGB8_PNEJ8 (tr|L0PGB8) DNA-directed RNA polymerase (Fragment) ... 358 3e-96
G1L7Q8_AILME (tr|G1L7Q8) DNA-directed RNA polymerase OS=Ailuropo... 358 4e-96
G0QLN6_ICHMG (tr|G0QLN6) Putative uncharacterized protein OS=Ich... 358 4e-96
C1G892_PARBD (tr|C1G892) DNA-directed RNA polymerase OS=Paracocc... 358 4e-96
A3LX46_PICST (tr|A3LX46) DNA-directed RNA polymerase OS=Scheffer... 358 4e-96
D2HMC2_AILME (tr|D2HMC2) DNA-directed RNA polymerase (Fragment) ... 358 4e-96
A0CCN6_PARTE (tr|A0CCN6) Chromosome undetermined scaffold_168, w... 358 5e-96
I2CX83_MACMU (tr|I2CX83) DNA-directed RNA polymerase OS=Macaca m... 357 7e-96
H2LHG2_ORYLA (tr|H2LHG2) DNA-directed RNA polymerase (Fragment) ... 357 8e-96
G3SPD8_LOXAF (tr|G3SPD8) DNA-directed RNA polymerase (Fragment) ... 357 1e-95
R7YGD8_9EURO (tr|R7YGD8) Uncharacterized protein OS=Coniosporium... 357 1e-95
L2FE86_COLGN (tr|L2FE86) DNA-directed RNA polymerase OS=Colletot... 357 1e-95
B8BVD8_THAPS (tr|B8BVD8) DNA-directed RNA polymerase OS=Thalassi... 357 1e-95
Q3U3J3_MOUSE (tr|Q3U3J3) DNA-directed RNA polymerase OS=Mus musc... 356 2e-95
M3V845_PIG (tr|M3V845) DNA-directed RNA polymerase OS=Sus scrofa... 356 2e-95
B3RXA6_TRIAD (tr|B3RXA6) DNA-directed RNA polymerase (Fragment) ... 356 2e-95
R8BT27_9PEZI (tr|R8BT27) Putative dna-directed rna polymerase pr... 356 2e-95
G0RQ42_HYPJQ (tr|G0RQ42) DNA-directed RNA polymerase OS=Hypocrea... 356 2e-95
I3J2B8_ORENI (tr|I3J2B8) DNA-directed RNA polymerase (Fragment) ... 356 2e-95
Q4SDA8_TETNG (tr|Q4SDA8) DNA-directed RNA polymerase (Fragment) ... 355 3e-95
I3J2B7_ORENI (tr|I3J2B7) DNA-directed RNA polymerase OS=Oreochro... 355 3e-95
G3XYH4_ASPNA (tr|G3XYH4) DNA-directed RNA polymerase OS=Aspergil... 355 3e-95
Q3V3C0_MOUSE (tr|Q3V3C0) DNA-directed RNA polymerase (Fragment) ... 355 3e-95
A2R5W5_ASPNC (tr|A2R5W5) DNA-directed RNA polymerase OS=Aspergil... 355 3e-95
H2RFP7_PANTR (tr|H2RFP7) DNA-directed RNA polymerase (Fragment) ... 355 3e-95
G7XU63_ASPKW (tr|G7XU63) DNA-directed RNA polymerase OS=Aspergil... 355 4e-95
B5RTF6_DEBHA (tr|B5RTF6) DNA-directed RNA polymerase OS=Debaryom... 355 4e-95
H2VAF9_TAKRU (tr|H2VAF9) DNA-directed RNA polymerase (Fragment) ... 354 6e-95
H2VAF7_TAKRU (tr|H2VAF7) DNA-directed RNA polymerase (Fragment) ... 354 7e-95
C1GZG1_PARBA (tr|C1GZG1) DNA-directed RNA polymerase OS=Paracocc... 354 7e-95
H2VAF8_TAKRU (tr|H2VAF8) DNA-directed RNA polymerase (Fragment) ... 354 7e-95
M1W4C2_CLAPU (tr|M1W4C2) DNA-directed RNA polymerase OS=Clavicep... 354 8e-95
G1QJ40_NOMLE (tr|G1QJ40) DNA-directed RNA polymerase OS=Nomascus... 353 1e-94
A5BB83_VITVI (tr|A5BB83) Putative uncharacterized protein OS=Vit... 353 1e-94
H3CZ72_TETNG (tr|H3CZ72) DNA-directed RNA polymerase (Fragment) ... 353 2e-94
A7S3D0_NEMVE (tr|A7S3D0) DNA-directed RNA polymerase (Fragment) ... 353 2e-94
E9EXQ5_METAR (tr|E9EXQ5) DNA-directed RNA polymerase OS=Metarhiz... 353 2e-94
Q9PTG7_XENLA (tr|Q9PTG7) DNA-directed RNA polymerase (Precursor)... 353 2e-94
H2VAF5_TAKRU (tr|H2VAF5) DNA-directed RNA polymerase (Fragment) ... 352 2e-94
Q239M6_TETTS (tr|Q239M6) DNA-dependent RNA polymerase family pro... 352 2e-94
H3CZ71_TETNG (tr|H3CZ71) DNA-directed RNA polymerase (Fragment) ... 352 2e-94
E9EDA9_METAQ (tr|E9EDA9) DNA-directed RNA polymerase OS=Metarhiz... 352 3e-94
E9PWD9_MOUSE (tr|E9PWD9) DNA-directed RNA polymerase OS=Mus musc... 352 4e-94
H2VAF6_TAKRU (tr|H2VAF6) DNA-directed RNA polymerase (Fragment) ... 351 5e-94
R4XD37_9ASCO (tr|R4XD37) DNA-directed RNA polymerase OS=Taphrina... 351 7e-94
F1Q5F7_DANRE (tr|F1Q5F7) DNA-directed RNA polymerase OS=Danio re... 350 8e-94
E7R4S0_PICAD (tr|E7R4S0) DNA-directed RNA polymerase OS=Pichia a... 350 1e-93
G2XCS8_VERDV (tr|G2XCS8) DNA-directed RNA polymerase OS=Verticil... 350 1e-93
B2ANR4_PODAN (tr|B2ANR4) DNA-directed RNA polymerase OS=Podospor... 350 2e-93
M3IK19_CANMA (tr|M3IK19) DNA-directed RNA polymerase OS=Candida ... 349 2e-93
F6RR66_XENTR (tr|F6RR66) DNA-directed RNA polymerase OS=Xenopus ... 349 3e-93
H3ATV4_LATCH (tr|H3ATV4) DNA-directed RNA polymerase (Fragment) ... 349 3e-93
G9HRK4_9SPIT (tr|G9HRK4) DNA-dependent RNA polymerase family pro... 348 3e-93
B6Q8C3_PENMQ (tr|B6Q8C3) DNA-directed RNA polymerase OS=Penicill... 348 4e-93
F4S3X3_MELLP (tr|F4S3X3) DNA-directed RNA polymerase OS=Melampso... 348 5e-93
F7GCL4_CALJA (tr|F7GCL4) DNA-directed RNA polymerase (Fragment) ... 348 6e-93
A5JEF2_PARLI (tr|A5JEF2) DNA-directed RNA polymerase OS=Paracent... 348 6e-93
E3QMB6_COLGM (tr|E3QMB6) DNA-directed RNA polymerase OS=Colletot... 348 7e-93
C3Y2C4_BRAFL (tr|C3Y2C4) DNA-directed RNA polymerase OS=Branchio... 347 7e-93
I3M2A6_SPETR (tr|I3M2A6) DNA-directed RNA polymerase OS=Spermoph... 347 1e-92
C7YY77_NECH7 (tr|C7YY77) DNA-directed RNA polymerase OS=Nectria ... 347 1e-92
E1BCZ0_BOVIN (tr|E1BCZ0) DNA-directed RNA polymerase OS=Bos taur... 346 2e-92
H8X1L6_CANO9 (tr|H8X1L6) DNA-directed RNA polymerase OS=Candida ... 346 2e-92
C4Y8E3_CLAL4 (tr|C4Y8E3) DNA-directed RNA polymerase OS=Clavispo... 346 3e-92
G9MXM1_HYPVG (tr|G9MXM1) DNA-directed RNA polymerase OS=Hypocrea... 345 4e-92
B8MRF0_TALSN (tr|B8MRF0) DNA-directed RNA polymerase OS=Talaromy... 345 5e-92
G9NT70_HYPAI (tr|G9NT70) DNA-directed RNA polymerase OS=Hypocrea... 344 8e-92
Q5ABC9_CANAL (tr|Q5ABC9) DNA-directed RNA polymerase OS=Candida ... 343 2e-91
C4YFJ1_CANAW (tr|C4YFJ1) DNA-directed RNA polymerase OS=Candida ... 343 2e-91
F4P6A9_BATDJ (tr|F4P6A9) Putative uncharacterized protein OS=Bat... 343 2e-91
G3HF40_CRIGR (tr|G3HF40) DNA-directed RNA polymerase OS=Cricetul... 343 2e-91
F9XJE6_MYCGM (tr|F9XJE6) DNA-directed RNA polymerase OS=Mycospha... 342 3e-91
J4UIN0_BEAB2 (tr|J4UIN0) DNA-directed RNA polymerase OS=Beauveri... 342 5e-91
R7VVF1_COLLI (tr|R7VVF1) DNA-directed RNA polymerase, mitochondr... 341 6e-91
K3W0W7_FUSPC (tr|K3W0W7) DNA-directed RNA polymerase OS=Fusarium... 341 8e-91
N1QDP6_9PEZI (tr|N1QDP6) DNA/RNA polymerase OS=Mycosphaerella po... 340 2e-90
M2MY29_9PEZI (tr|M2MY29) DNA-directed RNA polymerase OS=Baudoini... 339 2e-90
A1DIB9_NEOFI (tr|A1DIB9) DNA-directed RNA polymerase OS=Neosarto... 338 5e-90
A5DN82_PICGU (tr|A5DN82) DNA-directed RNA polymerase OS=Meyerozy... 338 5e-90
Q6CH64_YARLI (tr|Q6CH64) DNA-directed RNA polymerase OS=Yarrowia... 338 6e-90
D6WV41_TRICA (tr|D6WV41) DNA-directed RNA polymerase OS=Triboliu... 337 8e-90
H0VY05_CAVPO (tr|H0VY05) DNA-directed RNA polymerase OS=Cavia po... 337 1e-89
G4TLX8_PIRID (tr|G4TLX8) Related to RPO41-DNA-directed RNA polym... 336 2e-89
G3AEY0_SPAPN (tr|G3AEY0) Putative uncharacterized protein OS=Spa... 336 2e-89
A1C7P8_ASPCL (tr|A1C7P8) DNA-directed RNA polymerase OS=Aspergil... 336 2e-89
B2WGL2_PYRTR (tr|B2WGL2) DNA-directed RNA polymerase OS=Pyrenoph... 336 2e-89
Q0U2N8_PHANO (tr|Q0U2N8) DNA-directed RNA polymerase OS=Phaeosph... 336 2e-89
F2U5G9_SALS5 (tr|F2U5G9) DNA-directed RNA polymerase OS=Salpingo... 336 3e-89
R0IQ82_SETTU (tr|R0IQ82) Uncharacterized protein OS=Setosphaeria... 335 3e-89
Q4WZV7_ASPFU (tr|Q4WZV7) DNA-directed RNA polymerase OS=Neosarto... 335 3e-89
B0XUL0_ASPFC (tr|B0XUL0) DNA-directed RNA polymerase OS=Neosarto... 335 4e-89
A5DVV6_LODEL (tr|A5DVV6) DNA-directed RNA polymerase OS=Lodderom... 335 4e-89
G4NFN6_MAGO7 (tr|G4NFN6) DNA-directed RNA polymerase OS=Magnapor... 335 5e-89
E4ZQ41_LEPMJ (tr|E4ZQ41) DNA-directed RNA polymerase OS=Leptosph... 335 5e-89
F0X893_GROCL (tr|F0X893) DNA-directed RNA polymerase OS=Grosmann... 335 5e-89
B9W6L5_CANDC (tr|B9W6L5) DNA-directed RNA polymerase OS=Candida ... 334 6e-89
J3QFB0_PUCT1 (tr|J3QFB0) DNA-directed RNA polymerase OS=Puccinia... 334 7e-89
E1BZ13_CHICK (tr|E1BZ13) DNA-directed RNA polymerase OS=Gallus g... 334 9e-89
E3RGN3_PYRTT (tr|E3RGN3) DNA-directed RNA polymerase OS=Pyrenoph... 334 1e-88
Q2UD92_ASPOR (tr|Q2UD92) DNA-directed RNA polymerase OS=Aspergil... 334 1e-88
I8TNX0_ASPO3 (tr|I8TNX0) DNA-directed RNA polymerase OS=Aspergil... 334 1e-88
B8N6M7_ASPFN (tr|B8N6M7) DNA-directed RNA polymerase OS=Aspergil... 334 1e-88
L7JAR4_MAGOR (tr|L7JAR4) DNA-directed RNA polymerase OS=Magnapor... 333 1e-88
L7IDF0_MAGOR (tr|L7IDF0) DNA-directed RNA polymerase OS=Magnapor... 333 1e-88
G3JSG1_CORMM (tr|G3JSG1) DNA-directed RNA polymerase OS=Cordycep... 333 2e-88
G1MW79_MELGA (tr|G1MW79) DNA-directed RNA polymerase (Fragment) ... 332 4e-88
G8B7X1_CANPC (tr|G8B7X1) DNA-directed RNA polymerase OS=Candida ... 332 5e-88
H9I8M0_ATTCE (tr|H9I8M0) DNA-directed RNA polymerase OS=Atta cep... 332 5e-88
H0YQS8_TAEGU (tr|H0YQS8) DNA-directed RNA polymerase (Fragment) ... 331 6e-88
F4WHT1_ACREC (tr|F4WHT1) DNA-directed RNA polymerase OS=Acromyrm... 331 7e-88
N1PGJ0_MYCPJ (tr|N1PGJ0) Uncharacterized protein OS=Dothistroma ... 330 1e-87
N4XC35_COCHE (tr|N4XC35) Uncharacterized protein OS=Bipolaris ma... 330 1e-87
M2TI11_COCHE (tr|M2TI11) DNA-directed RNA polymerase OS=Bipolari... 330 1e-87
L8XZH8_TUPCH (tr|L8XZH8) DNA-directed RNA polymerase OS=Tupaia c... 329 3e-87
M2TMC0_COCSA (tr|M2TMC0) DNA-directed RNA polymerase OS=Bipolari... 328 4e-87
E3KKR4_PUCGT (tr|E3KKR4) DNA-directed RNA polymerase OS=Puccinia... 328 5e-87
J3P6J0_GAGT3 (tr|J3P6J0) DNA-directed RNA polymerase OS=Gaeumann... 328 6e-87
R7QN31_CHOCR (tr|R7QN31) Stackhouse genomic scaffold, scaffold_4... 328 6e-87
M3AMX9_9PEZI (tr|M3AMX9) DNA-directed RNA polymerase OS=Pseudoce... 326 2e-86
L5L765_PTEAL (tr|L5L765) DNA-directed RNA polymerase OS=Pteropus... 325 4e-86
G3PHQ7_GASAC (tr|G3PHQ7) DNA-directed RNA polymerase (Fragment) ... 323 1e-85
Q17K00_AEDAE (tr|Q17K00) DNA-directed RNA polymerase OS=Aedes ae... 322 5e-85
E9GF52_DAPPU (tr|E9GF52) DNA-directed RNA polymerase OS=Daphnia ... 321 6e-85
E1GB82_LOALO (tr|E1GB82) DNA-directed RNA polymerase OS=Loa loa ... 321 7e-85
E1ZV06_CAMFO (tr|E1ZV06) DNA-directed RNA polymerase OS=Camponot... 321 9e-85
M3WNJ2_FELCA (tr|M3WNJ2) DNA-directed RNA polymerase (Fragment) ... 320 9e-85
Q16EA9_AEDAE (tr|Q16EA9) DNA-directed RNA polymerase OS=Aedes ae... 320 1e-84
F1KUB3_ASCSU (tr|F1KUB3) DNA-directed RNA polymerase OS=Ascaris ... 319 2e-84
E9J4Y7_SOLIN (tr|E9J4Y7) DNA-directed RNA polymerase (Fragment) ... 318 5e-84
A9V1Q0_MONBE (tr|A9V1Q0) DNA-directed RNA polymerase OS=Monosiga... 318 6e-84
E0VGQ8_PEDHC (tr|E0VGQ8) DNA-directed RNA polymerase OS=Pediculu... 318 7e-84
J9K183_ACYPI (tr|J9K183) DNA-directed RNA polymerase OS=Acyrthos... 317 1e-83
A8PG00_BRUMA (tr|A8PG00) DNA-directed RNA polymerase OS=Brugia m... 314 7e-83
B4JQF3_DROGR (tr|B4JQF3) DNA-directed RNA polymerase OS=Drosophi... 311 5e-82
F7GNJ0_MACMU (tr|F7GNJ0) DNA-directed RNA polymerase OS=Macaca m... 311 6e-82
B3MN87_DROAN (tr|B3MN87) DNA-directed RNA polymerase OS=Drosophi... 311 7e-82
A7T5U5_NEMVE (tr|A7T5U5) DNA-directed RNA polymerase OS=Nematost... 311 9e-82
Q9D196_MOUSE (tr|Q9D196) DNA-directed RNA polymerase (Fragment) ... 310 1e-81
K1R5B9_CRAGI (tr|K1R5B9) DNA-directed RNA polymerase, mitochondr... 309 2e-81
Q2PZ39_TIGCA (tr|Q2PZ39) DNA-directed RNA polymerase OS=Tigriopu... 309 4e-81
Q2PZ44_TIGCA (tr|Q2PZ44) DNA-directed RNA polymerase OS=Tigriopu... 308 4e-81
B4MZP1_DROWI (tr|B4MZP1) DNA-directed RNA polymerase OS=Drosophi... 308 4e-81
Q2PZ40_TIGCA (tr|Q2PZ40) DNA-directed RNA polymerase (Fragment) ... 308 5e-81
Q2PZ43_TIGCA (tr|Q2PZ43) DNA-directed RNA polymerase OS=Tigriopu... 308 5e-81
Q2PZ35_TIGCA (tr|Q2PZ35) DNA-directed RNA polymerase (Fragment) ... 308 5e-81
M4QNP6_TIGCA (tr|M4QNP6) Mitochondrial RNA polymerase (Fragment)... 308 5e-81
B4P304_DROYA (tr|B4P304) DNA-directed RNA polymerase OS=Drosophi... 308 6e-81
B4FGZ4_MAIZE (tr|B4FGZ4) DNA-directed RNA polymerase OS=Zea mays... 307 8e-81
Q2PZ36_TIGCA (tr|Q2PZ36) DNA-directed RNA polymerase (Fragment) ... 307 9e-81
Q2PZ34_TIGCA (tr|Q2PZ34) DNA-directed RNA polymerase (Fragment) ... 307 1e-80
Q2PZ45_TIGCA (tr|Q2PZ45) DNA-directed RNA polymerase OS=Tigriopu... 307 1e-80
Q9VPW4_DROME (tr|Q9VPW4) DNA-directed RNA polymerase OS=Drosophi... 307 1e-80
Q2PZ42_TIGCA (tr|Q2PZ42) DNA-directed RNA polymerase OS=Tigriopu... 307 1e-80
B4LUB0_DROVI (tr|B4LUB0) DNA-directed RNA polymerase OS=Drosophi... 307 1e-80
Q2PZ37_TIGCA (tr|Q2PZ37) DNA-directed RNA polymerase OS=Tigriopu... 307 1e-80
B4KET7_DROMO (tr|B4KET7) DNA-directed RNA polymerase OS=Drosophi... 306 2e-80
B4Q6M5_DROSI (tr|B4Q6M5) DNA-directed RNA polymerase OS=Drosophi... 306 2e-80
I1FB80_AMPQE (tr|I1FB80) Uncharacterized protein OS=Amphimedon q... 306 2e-80
Q2PZ38_TIGCA (tr|Q2PZ38) DNA-directed RNA polymerase OS=Tigriopu... 306 2e-80
B3N8B5_DROER (tr|B3N8B5) DNA-directed RNA polymerase OS=Drosophi... 306 2e-80
B0W1Q8_CULQU (tr|B0W1Q8) DNA-directed RNA polymerase OS=Culex qu... 305 4e-80
Q2PZ41_TIGCA (tr|Q2PZ41) DNA-directed RNA polymerase OS=Tigriopu... 305 5e-80
B4ID50_DROSE (tr|B4ID50) DNA-directed RNA polymerase OS=Drosophi... 303 1e-79
L7LYM7_9ACAR (tr|L7LYM7) DNA-directed RNA polymerase OS=Rhipicep... 303 2e-79
G9KHU0_MUSPF (tr|G9KHU0) DNA-directed RNA polymerase (Fragment) ... 301 5e-79
Q29LI1_DROPS (tr|Q29LI1) DNA-directed RNA polymerase OS=Drosophi... 297 1e-77
H2Y632_CIOSA (tr|H2Y632) DNA-directed RNA polymerase (Fragment) ... 296 2e-77
N6T6B1_9CUCU (tr|N6T6B1) Uncharacterized protein (Fragment) OS=D... 296 2e-77
E2B480_HARSA (tr|E2B480) DNA-directed RNA polymerase OS=Harpegna... 295 3e-77
G7YI53_CLOSI (tr|G7YI53) DNA-directed RNA polymerase OS=Clonorch... 294 1e-76
C5KD29_PERM5 (tr|C5KD29) Putative uncharacterized protein OS=Per... 293 2e-76
A8XWB1_CAEBR (tr|A8XWB1) DNA-directed RNA polymerase OS=Caenorha... 291 5e-76
G4V993_SCHMA (tr|G4V993) DNA-directed RNA polymerase OS=Schistos... 290 1e-75
A5B3H8_VITVI (tr|A5B3H8) Putative uncharacterized protein OS=Vit... 290 1e-75
M4CWT4_BRARP (tr|M4CWT4) Uncharacterized protein OS=Brassica rap... 290 1e-75
Q8WQA3_CAEEL (tr|Q8WQA3) DNA-directed RNA polymerase OS=Caenorha... 289 3e-75
C9S6U0_VERA1 (tr|C9S6U0) DNA-directed RNA polymerase OS=Verticil... 289 3e-75
Q2PZ46_TIGCA (tr|Q2PZ46) DNA-directed RNA polymerase (Fragment) ... 289 3e-75
H2WBN7_CAEJA (tr|H2WBN7) DNA-directed RNA polymerase OS=Caenorha... 289 3e-75
E3N1N7_CAERE (tr|E3N1N7) DNA-directed RNA polymerase OS=Caenorha... 285 4e-74
H2QES6_PANTR (tr|H2QES6) Uncharacterized protein OS=Pan troglody... 285 5e-74
A5PEY3_CAEEL (tr|A5PEY3) DNA-directed RNA polymerase OS=Caenorha... 283 2e-73
Q0QFS0_9EUKA (tr|Q0QFS0) DNA-directed RNA polymerase (Fragment) ... 282 4e-73
M3GE26_STEMA (tr|M3GE26) DNA-directed RNA polymerase OS=Stenotro... 281 1e-72
E5SG31_TRISP (tr|E5SG31) DNA-directed RNA polymerase OS=Trichine... 280 1e-72
M5CVP8_STEMA (tr|M5CVP8) DNA-directed RNA polymerase OS=Stenotro... 280 1e-72
A7AMS9_BABBO (tr|A7AMS9) DNA-directed RNA polymerase OS=Babesia ... 279 3e-72
Q0QFR9_9EUKA (tr|Q0QFR9) DNA-directed RNA polymerase (Fragment) ... 279 3e-72
G3SEZ7_GORGO (tr|G3SEZ7) DNA-directed RNA polymerase (Fragment) ... 278 9e-72
E9CAC7_CAPO3 (tr|E9CAC7) DNA-directed RNA polymerase OS=Capsaspo... 277 9e-72
K7JB20_NASVI (tr|K7JB20) DNA-directed RNA polymerase OS=Nasonia ... 276 2e-71
F0VQ85_NEOCL (tr|F0VQ85) DNA-directed RNA polymerase OS=Neospora... 273 2e-70
B9PQ14_TOXGO (tr|B9PQ14) DNA-directed RNA polymerase OS=Toxoplas... 273 2e-70
B6KGP1_TOXGO (tr|B6KGP1) DNA-directed RNA polymerase OS=Toxoplas... 273 2e-70
G0MJN3_CAEBE (tr|G0MJN3) DNA-directed RNA polymerase OS=Caenorha... 272 4e-70
M4BTL5_HYAAE (tr|M4BTL5) Uncharacterized protein OS=Hyaloperonos... 272 4e-70
L1LFT7_BABEQ (tr|L1LFT7) DNA-directed RNA polymerase OS=Babesia ... 269 3e-69
Q4Z4B5_PLABA (tr|Q4Z4B5) DNA-directed RNA polymerase (Fragment) ... 267 1e-68
Q4XV65_PLACH (tr|Q4XV65) DNA-directed RNA polymerase (Fragment) ... 266 3e-68
Q7RAE1_PLAYO (tr|Q7RAE1) DNA-directed RNA polymerase OS=Plasmodi... 263 2e-67
K7N813_HETTR (tr|K7N813) DNA-directed RNA polymerase OS=Heteroca... 261 7e-67
A5K4R4_PLAVS (tr|A5K4R4) DNA-directed RNA polymerase OS=Plasmodi... 261 8e-67
B3L558_PLAKH (tr|B3L558) DNA-directed RNA polymerase OS=Plasmodi... 261 9e-67
Q4UIH0_THEAN (tr|Q4UIH0) DNA-directed RNA polymerase OS=Theileri... 260 2e-66
Q4N745_THEPA (tr|Q4N745) DNA-directed RNA polymerase OS=Theileri... 256 2e-65
I7ISY9_BABMI (tr|I7ISY9) DNA-directed RNA polymerase OS=Babesia ... 256 3e-65
Q9GZ07_PLAFA (tr|Q9GZ07) DNA-directed RNA polymerase OS=Plasmodi... 255 4e-65
G3SF84_GORGO (tr|G3SF84) Uncharacterized protein (Fragment) OS=G... 255 4e-65
Q8IIB0_PLAF7 (tr|Q8IIB0) DNA-directed RNA polymerase OS=Plasmodi... 255 4e-65
K6UTD6_9APIC (tr|K6UTD6) DNA-directed RNA polymerase OS=Plasmodi... 253 2e-64
B9N9Q4_POPTR (tr|B9N9Q4) Predicted protein OS=Populus trichocarp... 250 1e-63
H9JHD2_BOMMO (tr|H9JHD2) Uncharacterized protein OS=Bombyx mori ... 249 2e-63
A5CAT5_VITVI (tr|A5CAT5) Putative uncharacterized protein OS=Vit... 248 7e-63
R7VAU6_9ANNE (tr|R7VAU6) Uncharacterized protein OS=Capitella te... 246 3e-62
F9WCU6_TRYCI (tr|F9WCU6) Putative uncharacterized protein TCIL30... 246 3e-62
Q95WT2_9TRYP (tr|Q95WT2) RNA polymerase OS=Trypanosoma brucei GN... 245 5e-62
Q385J0_TRYB2 (tr|Q385J0) Mitochondrial DNA-directed RNA polymera... 244 8e-62
D0A783_TRYB9 (tr|D0A783) Mitochondrial DNA-directed RNA polymera... 244 9e-62
K7K9S6_SOYBN (tr|K7K9S6) Uncharacterized protein OS=Glycine max ... 242 3e-61
B9QZJ6_9RHOB (tr|B9QZJ6) DNA-dependent RNA polymerase domain pro... 242 4e-61
A5DAF4_PICGU (tr|A5DAF4) DNA-directed RNA polymerase OS=Meyerozy... 242 5e-61
R1CSH1_EMIHU (tr|R1CSH1) Mitochondrial RNA polymerase (Fragment)... 240 1e-60
>K7KWI1_SOYBN (tr|K7KWI1) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 973
Score = 1219 bits (3154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 585/723 (80%), Positives = 635/723 (87%)
Query: 5 QEVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEP 64
Q+ +E E ++ LRRRQIEAETEAW APNLP VKSLLLGWFEP
Sbjct: 127 QKDKEREKYNLLRRRQIEAETEAWEKMVEEYRELEREMREKMLAPNLPHVKSLLLGWFEP 186
Query: 65 LKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGCVQLVQA 124
+ AVEAEQ AH+AR KKQQ SIAP+VD LPA KVAVIVMHKMM++VMENEEGCVQLV A
Sbjct: 187 FRAAVEAEQTAHRARPKKQQDSIAPHVDDLPADKVAVIVMHKMMAMVMENEEGCVQLVHA 246
Query: 125 AVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEV 184
AV IGMALEQEVRIHKF+EGNKS QSKKTE D E++L++DKEKQR ++N L+K+ +L+EV
Sbjct: 247 AVHIGMALEQEVRIHKFVEGNKSSQSKKTEGDAEDSLDSDKEKQRNYLNSLLKKNRLREV 306
Query: 185 HVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQS 244
++L++EE SPWSR QAKLGSRL+ELLI+TAYVHSPVNQSADTPPDIRPAFRHGFK
Sbjct: 307 QMILRKEECSPWSRDTQAKLGSRLVELLIDTAYVHSPVNQSADTPPDIRPAFRHGFKAVP 366
Query: 245 RSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYI 304
PGQK K YG+IQCDPLVL GLEKCAKH KKWKGYDKGGHLFLPSYI
Sbjct: 367 WHPGQKFSKKYGIIQCDPLVLVGLEKCAKHMLIPYMPMLIPPKKWKGYDKGGHLFLPSYI 426
Query: 305 MRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLV 364
MRTHGS+KQQDVMKNV G QMQKVFEALDILGNTK R+N R+L VVESIWAGGGN+AGLV
Sbjct: 427 MRTHGSKKQQDVMKNVDGAQMQKVFEALDILGNTKWRVNRRVLGVVESIWAGGGNIAGLV 486
Query: 365 DCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFY 424
DC++VP PDKP EDLK IQEWK VRKAKK+NLERHS RCDTELKLSVARKMKDE+ FY
Sbjct: 487 DCKDVPKPDKPLVEDLKLIQEWKCNVRKAKKINLERHSLRCDTELKLSVARKMKDEEGFY 546
Query: 425 YPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEK 484
YPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEK
Sbjct: 547 YPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEK 606
Query: 485 LSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVI 544
SYDGRLGF+E+HIHDIFDSAD+P+NGNRWWL AEDPFQCLAACINLSEALRSSSPNS I
Sbjct: 607 QSYDGRLGFIEDHIHDIFDSADHPINGNRWWLTAEDPFQCLAACINLSEALRSSSPNSFI 666
Query: 545 SHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKD 604
SHLPIHQDGSCNGLQHYAALGRD+LEAAAVNLVAKEKPADVY+EIAVRV+DIMR+DSNKD
Sbjct: 667 SHLPIHQDGSCNGLQHYAALGRDDLEAAAVNLVAKEKPADVYTEIAVRVYDIMRQDSNKD 726
Query: 605 PSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFT 664
P TFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGAR+QIK+RL EKG +TDDRLL+
Sbjct: 727 PDTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGAREQIKRRLGEKGFVTDDRLLYA 786
Query: 665 AACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTER 724
A+CYAAKVTLAALGEVFEAARGIM WLGDCAKVIA ENQAV WTTPLGLPVVQPYCKTER
Sbjct: 787 ASCYAAKVTLAALGEVFEAARGIMGWLGDCAKVIACENQAVCWTTPLGLPVVQPYCKTER 846
Query: 725 HLV 727
+ +
Sbjct: 847 YQI 849
>K7MKB9_SOYBN (tr|K7MKB9) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 884
Score = 1143 bits (2956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/724 (75%), Positives = 622/724 (85%), Gaps = 4/724 (0%)
Query: 6 EVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPL 65
++ E + + LRRRQI+AETEA PNLP VK+L LGWF+PL
Sbjct: 105 DIEEEKKLNLLRRRQIKAETEALEKMVEEYRELEREMREKNLTPNLPHVKALFLGWFDPL 164
Query: 66 KEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMEN--EEGCVQLVQ 123
KEA+EAEQK+ RSKK +A+ AP++DSLPAAK+AVIVMHK+M LV + GCV LV
Sbjct: 165 KEAIEAEQKS--KRSKKHKAAFAPHIDSLPAAKLAVIVMHKVMGLVTQEYRRAGCVLLVD 222
Query: 124 AAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKE 183
AAVQIGMA+EQEVRIHKFLE +S QSKKTEA E++++NDK+K RK VNGLIKR++LK+
Sbjct: 223 AAVQIGMAVEQEVRIHKFLEKTRSHQSKKTEAGDEDSMDNDKQKLRKHVNGLIKRRRLKQ 282
Query: 184 VHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQ 243
V ++LK++E PW R QAKLGSRLIELLIETA+VHSPVNQSADTPPDIRPAFRH FK
Sbjct: 283 VQMLLKEKESGPWGRDTQAKLGSRLIELLIETAFVHSPVNQSADTPPDIRPAFRHKFKAI 342
Query: 244 SRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSY 303
S++P QKILKNYGVI+CDPLVLAG++K KH KKWKGY+KGGHLFLPSY
Sbjct: 343 SKNPEQKILKNYGVIECDPLVLAGMDKSVKHMLMPYMPMLVPPKKWKGYEKGGHLFLPSY 402
Query: 304 IMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGL 363
IMRTHGS+KQQDVMKNV+ +QMQKVFEALD LGNTK R+N RLL+VVES+WAGGGN+AGL
Sbjct: 403 IMRTHGSKKQQDVMKNVERKQMQKVFEALDTLGNTKWRVNRRLLNVVESLWAGGGNIAGL 462
Query: 364 VDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCF 423
+D ++VP+P++PP DLKQIQEWK+ VRKA+K+NLERHS RCDTELKLSVA+KMKDE+ F
Sbjct: 463 IDRKDVPIPERPPLGDLKQIQEWKWSVRKAEKINLERHSLRCDTELKLSVAQKMKDEEGF 522
Query: 424 YYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIE 483
YYPHN+DFRGRAYPMH HLNHL DLCRGLLEFAEGRPLG+SGL WLKIHLANLYAGGIE
Sbjct: 523 YYPHNVDFRGRAYPMHSHLNHLSCDLCRGLLEFAEGRPLGESGLCWLKIHLANLYAGGIE 582
Query: 484 KLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSV 543
KLSYDGRL FVENH+HDIFDSADNP+NGNRWWL A+DPFQCLAACINLSEALRSSSPNSV
Sbjct: 583 KLSYDGRLAFVENHLHDIFDSADNPINGNRWWLMADDPFQCLAACINLSEALRSSSPNSV 642
Query: 544 ISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNK 603
I HLPIHQDGSCNGLQHYAALGRD LEAAAVNLVA EKPADVYSEIAVRVHDIMR+D K
Sbjct: 643 ILHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVASEKPADVYSEIAVRVHDIMRKDCIK 702
Query: 604 DPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLF 663
DP+ +PNALLAKVLIDQIDRKLVKQTVMTSVYGVT++GAR+QIK+RLEEKGLITD++LLF
Sbjct: 703 DPAAYPNALLAKVLIDQIDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGLITDEKLLF 762
Query: 664 TAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTE 723
AACYAAKVTL ALGE+F AAR IM WLGDCAKVIA+ENQ V WTTPLGLPVVQPYCKTE
Sbjct: 763 AAACYAAKVTLTALGEIFGAARVIMGWLGDCAKVIAFENQPVRWTTPLGLPVVQPYCKTE 822
Query: 724 RHLV 727
RHL+
Sbjct: 823 RHLI 826
>I1MT00_SOYBN (tr|I1MT00) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=2
Length = 951
Score = 1141 bits (2952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/724 (75%), Positives = 622/724 (85%), Gaps = 4/724 (0%)
Query: 6 EVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPL 65
++ E + + LRRRQI+AETEA PNLP VK+L LGWF+PL
Sbjct: 105 DIEEEKKLNLLRRRQIKAETEALEKMVEEYRELEREMREKNLTPNLPHVKALFLGWFDPL 164
Query: 66 KEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMEN--EEGCVQLVQ 123
KEA+EAEQK+ RSKK +A+ AP++DSLPAAK+AVIVMHK+M LV + GCV LV
Sbjct: 165 KEAIEAEQKS--KRSKKHKAAFAPHIDSLPAAKLAVIVMHKVMGLVTQEYRRAGCVLLVD 222
Query: 124 AAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKE 183
AAVQIGMA+EQEVRIHKFLE +S QSKKTEA E++++NDK+K RK VNGLIKR++LK+
Sbjct: 223 AAVQIGMAVEQEVRIHKFLEKTRSHQSKKTEAGDEDSMDNDKQKLRKHVNGLIKRRRLKQ 282
Query: 184 VHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQ 243
V ++LK++E PW R QAKLGSRLIELLIETA+VHSPVNQSADTPPDIRPAFRH FK
Sbjct: 283 VQMLLKEKESGPWGRDTQAKLGSRLIELLIETAFVHSPVNQSADTPPDIRPAFRHKFKAI 342
Query: 244 SRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSY 303
S++P QKILKNYGVI+CDPLVLAG++K KH KKWKGY+KGGHLFLPSY
Sbjct: 343 SKNPEQKILKNYGVIECDPLVLAGMDKSVKHMLMPYMPMLVPPKKWKGYEKGGHLFLPSY 402
Query: 304 IMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGL 363
IMRTHGS+KQQDVMKNV+ +QMQKVFEALD LGNTK R+N RLL+VVES+WAGGGN+AGL
Sbjct: 403 IMRTHGSKKQQDVMKNVERKQMQKVFEALDTLGNTKWRVNRRLLNVVESLWAGGGNIAGL 462
Query: 364 VDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCF 423
+D ++VP+P++PP DLKQIQEWK+ VRKA+K+NLERHS RCDTELKLSVA+KMKDE+ F
Sbjct: 463 IDRKDVPIPERPPLGDLKQIQEWKWSVRKAEKINLERHSLRCDTELKLSVAQKMKDEEGF 522
Query: 424 YYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIE 483
YYPHN+DFRGRAYPMH HLNHL DLCRGLLEFAEGRPLG+SGL WLKIHLANLYAGGIE
Sbjct: 523 YYPHNVDFRGRAYPMHSHLNHLSCDLCRGLLEFAEGRPLGESGLCWLKIHLANLYAGGIE 582
Query: 484 KLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSV 543
KLSYDGRL FVENH+HDIFDSADNP+NGNRWWL A+DPFQCLAACINLSEALRSSSPNSV
Sbjct: 583 KLSYDGRLAFVENHLHDIFDSADNPINGNRWWLMADDPFQCLAACINLSEALRSSSPNSV 642
Query: 544 ISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNK 603
I HLPIHQDGSCNGLQHYAALGRD LEAAAVNLVA EKPADVYSEIAVRVHDIMR+D K
Sbjct: 643 ILHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVASEKPADVYSEIAVRVHDIMRKDCIK 702
Query: 604 DPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLF 663
DP+ +PNALLAKVLIDQIDRKLVKQTVMTSVYGVT++GAR+QIK+RLEEKGLITD++LLF
Sbjct: 703 DPAAYPNALLAKVLIDQIDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGLITDEKLLF 762
Query: 664 TAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTE 723
AACYAAKVTL ALGE+F AAR IM WLGDCAKVIA+ENQ V WTTPLGLPVVQPYCKTE
Sbjct: 763 AAACYAAKVTLTALGEIFGAARVIMGWLGDCAKVIAFENQPVRWTTPLGLPVVQPYCKTE 822
Query: 724 RHLV 727
RHL+
Sbjct: 823 RHLI 826
>M5VSV3_PRUPE (tr|M5VSV3) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa000868mg PE=4 SV=1
Length = 976
Score = 1124 bits (2907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/733 (73%), Positives = 615/733 (83%), Gaps = 9/733 (1%)
Query: 2 RAEQEVR------EAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVK 55
RA QE++ E ++ LRRRQI+AETEAW APNLP VK
Sbjct: 122 RANQELKLESKEIERRNYNVLRRRQIKAETEAWERMVDEYKDLEKVMREKKLAPNLPYVK 181
Query: 56 SLLLGWFEPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVM-EN 114
+L LGWFEPL+EA+ EQK Q +KK +A+ AP++D LPA K+A+IVMHKMM LVM N
Sbjct: 182 ALFLGWFEPLREAIAREQKTQQ--TKKHKAAFAPHIDLLPADKMALIVMHKMMGLVMVGN 239
Query: 115 EEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNG 174
++GCVQ+VQAAV IGMA+EQEVRIH FLE K+LQ KKT E+ L+ +KE RK VNG
Sbjct: 240 QDGCVQVVQAAVHIGMAIEQEVRIHSFLEKTKNLQKKKTGVADEDGLSKEKEILRKRVNG 299
Query: 175 LIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRP 234
LI+RK+L EV +L +EE+ PW R QAKLGSRLIELL ETAYV P++Q AD+PPD+RP
Sbjct: 300 LIRRKRLNEVQKLLIKEEMKPWGRDKQAKLGSRLIELLTETAYVQPPLSQLADSPPDVRP 359
Query: 235 AFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDK 294
AFRH FK ++SPGQKI+KNYGVI+CDPLVL GL+K AKH K+WKGYDK
Sbjct: 360 AFRHRFKAVAKSPGQKIVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPKRWKGYDK 419
Query: 295 GGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIW 354
GGHLFLPSY+MRTHGSRKQ D M+N+ QMQKVFEALD+LG+TK R+N ++L VVESIW
Sbjct: 420 GGHLFLPSYVMRTHGSRKQVDAMRNISRNQMQKVFEALDMLGSTKWRVNKKVLSVVESIW 479
Query: 355 AGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVA 414
A GGN+AGLV+ E+VP+PDK P+EDLK+IQEWK+ VRKAKK+N ERHSQRCDTELKLSVA
Sbjct: 480 ARGGNIAGLVNREDVPVPDKSPSEDLKEIQEWKWSVRKAKKINQERHSQRCDTELKLSVA 539
Query: 415 RKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHL 474
RKMKDE+ FYYPHNLDFRGRAYPMHPHLNHL SDLCRG+LEFAEGRPLGKSGLRWLKIHL
Sbjct: 540 RKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHL 599
Query: 475 ANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEA 534
ANLYAGG+EKLSY+GRL FV+NHI DIFDSA NPVNGNRWWL AEDP QCLAACINLSEA
Sbjct: 600 ANLYAGGVEKLSYEGRLAFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEA 659
Query: 535 LRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVH 594
L S SP++VISHLPIHQDGSCNGLQHYAALGRD LEAAAVNLV +KPADVYSEIA RVH
Sbjct: 660 LNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVDGDKPADVYSEIAARVH 719
Query: 595 DIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKG 654
+IM+RDSNKDP+T PNALLA++L++QIDRKLVKQTVMTSVYGVTY+GAR+QIK+RLEEKG
Sbjct: 720 EIMKRDSNKDPTTSPNALLARILVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKG 779
Query: 655 LITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLP 714
LITDDRLLFTAACYAAKVTLAALGE+F+AARGIMSWLGDCAKVIA ENQ V WTTPLGLP
Sbjct: 780 LITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPLGLP 839
Query: 715 VVQPYCKTERHLV 727
VVQPYCK+ERHL+
Sbjct: 840 VVQPYCKSERHLI 852
>B9IMA6_POPTR (tr|B9IMA6) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_911981 PE=3 SV=1
Length = 882
Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/720 (72%), Positives = 603/720 (83%), Gaps = 3/720 (0%)
Query: 9 EAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEA 68
E ++ LRRRQI ETEAW APNLP VK LLLGWFEPLKEA
Sbjct: 41 EKRKYNLLRRRQIREETEAWERMADEYRGLVREMCERKLAPNLPYVKGLLLGWFEPLKEA 100
Query: 69 VEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVM-ENEEGCVQLVQAAVQ 127
+E EQK +SKKQ+++ +PN++ LPA K+AVIVMHKMM L+M +E+GCV++VQAAVQ
Sbjct: 101 IEKEQKME--KSKKQKSAFSPNIELLPADKMAVIVMHKMMGLLMVGHEDGCVRVVQAAVQ 158
Query: 128 IGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVV 187
IGMA+EQEVRIH FLE K+ Q KKT + +E ++ +KE RK VN LI+RK+L EV +
Sbjct: 159 IGMAIEQEVRIHNFLEKTKNYQRKKTMHEVQETMDKEKEVLRKRVNSLIRRKRLMEVQNL 218
Query: 188 LKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSP 247
+KQ+E PWSR QAKLGSRLIELL ETAYV PVNQS D PPD+RPAFRH FK +++P
Sbjct: 219 VKQDETKPWSRGTQAKLGSRLIELLTETAYVQPPVNQSEDIPPDVRPAFRHIFKTLTKNP 278
Query: 248 GQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT 307
GQKI+K YGVI+CDPL+L GL+ AKH KKWKGYDKGGHLFLPSY+MRT
Sbjct: 279 GQKIVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWKGYDKGGHLFLPSYVMRT 338
Query: 308 HGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE 367
HGSR+QQ +++V G+QMQKVFEALD LGNTK R+N RLLDVVE IW GGN+AGLVD E
Sbjct: 339 HGSRQQQVAVRSVPGKQMQKVFEALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDRE 398
Query: 368 NVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPH 427
++P+P+KP ++DL +IQ+WK+ VRKAKK+N ERHSQRCDTELKLSVARK+KDE+ FYYPH
Sbjct: 399 DIPIPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPH 458
Query: 428 NLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSY 487
NLDFRGRAYPMHPHL HL SDLCRG+LEF EGRPLGKSGLRWLKIHLANLY+GG+EKLS+
Sbjct: 459 NLDFRGRAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSH 518
Query: 488 DGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHL 547
DGRL FVENH+ +IFDSA NPVNG RWWL+AEDPFQCLAACINLSEAL S+SP++VISHL
Sbjct: 519 DGRLAFVENHLSEIFDSAKNPVNGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHL 578
Query: 548 PIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPST 607
PIHQDGSCNGLQHYAALGRD LEAAAVNLVA EKP+DVYSEIAVRVH+I+RRDSNKDP+T
Sbjct: 579 PIHQDGSCNGLQHYAALGRDTLEAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPAT 638
Query: 608 FPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAAC 667
P+ALLAK+L+DQ+DRKLVKQTVMTSVYGVTY+GAR+QIK+RLEEKG ITDDRLLF+AAC
Sbjct: 639 NPHALLAKILVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAAC 698
Query: 668 YAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
Y AKVTL ALGE+F+AAR IMSWLGDCAK+IA E+Q V WTTPLGLPVVQPY KTERHL+
Sbjct: 699 YTAKVTLTALGELFQAARDIMSWLGDCAKIIASEDQPVQWTTPLGLPVVQPYYKTERHLI 758
>F6HYL3_VITVI (tr|F6HYL3) DNA-directed RNA polymerase OS=Vitis vinifera
GN=VIT_11s0037g00630 PE=3 SV=1
Length = 979
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/725 (72%), Positives = 602/725 (83%), Gaps = 6/725 (0%)
Query: 6 EVREAE--TFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFE 63
E RE E + LRRRQ++AETEAW APNLP VK+L LGWFE
Sbjct: 134 EFRETERRNYGLLRRRQVKAETEAWERMVEEYREIEREMCEKKLAPNLPYVKALFLGWFE 193
Query: 64 PLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVME-NEEGCVQLV 122
PL+EA++ EQ+A R+KKQ+A+ AP+++ LPA K+AVIVMHKMM LVM +EEGCV++V
Sbjct: 194 PLREAIDKEQRAQ--RTKKQKAAYAPHIELLPADKMAVIVMHKMMGLVMMGHEEGCVRVV 251
Query: 123 QAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLK 182
QAAVQIGMA+EQEVRIH FLE K+ + KT ++E L +KE RK V I++KK+
Sbjct: 252 QAAVQIGMAIEQEVRIHSFLEKTKNFERHKTVGHSQEGLR-EKEILRKRVKSFIRKKKII 310
Query: 183 EVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKP 242
EV ++K EE++PW R QAKLGSRLIELL ETAYV +PVNQSAD PPD+RPAFRH FK
Sbjct: 311 EVQKLVKNEEITPWGRDTQAKLGSRLIELLTETAYVQTPVNQSADCPPDVRPAFRHTFKT 370
Query: 243 QSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPS 302
++ GQK + YGVI+CDPLVL GL++ AKH KKWKGYDKGG+LFLPS
Sbjct: 371 VTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPS 430
Query: 303 YIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAG 362
Y+MRTHGSRKQQD +K+V Q+QKVFEALD LGNTK RIN R+L VVESIWA GGN+ G
Sbjct: 431 YVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESIWARGGNLGG 490
Query: 363 LVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDC 422
LVD ENVPLP+KP TEDL +IQ WK+ RKAKK+N ERHS RCDTE+KLSVARKMKDE+
Sbjct: 491 LVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVARKMKDEEG 550
Query: 423 FYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGI 482
FYYPHNLDFRGRAYPMHPHLNHL SDLCRG+LEFAEGRPLGKSGLRWLKI LANLYAGG+
Sbjct: 551 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGV 610
Query: 483 EKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNS 542
EKLSYDGRL FV+NH+ D+FDSADNP+NGNRWWL AEDPFQCLAACINLSEALRSSSP++
Sbjct: 611 EKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHT 670
Query: 543 VISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSN 602
VISHLPIHQDGSCNGLQHYAALGR+ LEA+AVNLVA EKPADVYSEIA RVH+IM+RDSN
Sbjct: 671 VISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSN 730
Query: 603 KDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLL 662
KDP+T P ALLAKVLI Q+DRKLVKQTVMTSVYGVTYIGAR+QIK+RL EKGLITD+RLL
Sbjct: 731 KDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLL 790
Query: 663 FTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKT 722
FTAACYAAKVTLAALGE+F+AAR IM+WLG+CAKVIA ENQ V WTTPLGLPV+QPYCK+
Sbjct: 791 FTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKS 850
Query: 723 ERHLV 727
ERHL+
Sbjct: 851 ERHLI 855
>B9HB51_POPTR (tr|B9HB51) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_802205 PE=2 SV=1
Length = 982
Score = 1071 bits (2769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/720 (71%), Positives = 600/720 (83%), Gaps = 3/720 (0%)
Query: 9 EAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEA 68
E ++ LRRRQI ETEAW APNLP VKSL LGWFEPLKEA
Sbjct: 141 EKRKYNLLRRRQIREETEAWERMAEEYTGLVKEMCERKLAPNLPYVKSLFLGWFEPLKEA 200
Query: 69 VEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVM-ENEEGCVQLVQAAVQ 127
+E EQK +SKKQ+++ +PN++ LPA K+AVIVMHKMM LVM +E+GCV++VQAAVQ
Sbjct: 201 IEREQKLE--KSKKQKSAFSPNIELLPADKMAVIVMHKMMGLVMVGHEDGCVRVVQAAVQ 258
Query: 128 IGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVV 187
IG+A+EQEVRIH FLE K+ Q KKT D +E+++ +KE RK VN LI+RK+L EV +
Sbjct: 259 IGIAIEQEVRIHNFLEKTKNHQRKKTMHDVQESMDKEKEMLRKRVNSLIRRKRLMEVQNL 318
Query: 188 LKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSP 247
+ Q+E PW+R QAKLGSRLIELL ETAYV PV+QS PPD+RPAFRH FK +++P
Sbjct: 319 VIQDETKPWNRDKQAKLGSRLIELLTETAYVQPPVDQSEGIPPDVRPAFRHIFKSVTKNP 378
Query: 248 GQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT 307
GQK +K YGVI+CDPL+L GL+ AKH KKW+GYDKGGHLFLPSYIMRT
Sbjct: 379 GQKTVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWRGYDKGGHLFLPSYIMRT 438
Query: 308 HGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE 367
HGSR+QQD +++V G+QMQKVFEALD LGNTK R+NG++LDVVE IWA GGN AGLV+
Sbjct: 439 HGSRQQQDAVRSVPGKQMQKVFEALDTLGNTKWRVNGKVLDVVERIWASGGNNAGLVNRG 498
Query: 368 NVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPH 427
++P+P+K ++DL +IQ+WK+ VRKAKK+N ERHSQRCDTELKLSVARK+KDE+ FYYPH
Sbjct: 499 DIPIPEKLSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPH 558
Query: 428 NLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSY 487
NLDFRGRAYPMHPHL HL SDLCRG+LEFAEGRPLGKSGL WLKIHLANLY+GG+EKLS+
Sbjct: 559 NLDFRGRAYPMHPHLTHLSSDLCRGVLEFAEGRPLGKSGLCWLKIHLANLYSGGVEKLSH 618
Query: 488 DGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHL 547
DGRL FVENH+ +IFDSA+NPVNG RWWL AEDPFQCLAACINLSEAL+S+SP++VISHL
Sbjct: 619 DGRLAFVENHLSEIFDSAENPVNGKRWWLTAEDPFQCLAACINLSEALKSASPHTVISHL 678
Query: 548 PIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPST 607
PIHQDGSCNGLQHYAALGRD EAAAVNLVA EKP+DVYSEIA RVH+I+RRDSNKDP+T
Sbjct: 679 PIHQDGSCNGLQHYAALGRDSQEAAAVNLVAAEKPSDVYSEIATRVHEIIRRDSNKDPAT 738
Query: 608 FPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAAC 667
P+ALLAKVLID++DRKLVKQTVMTSVYGVTY+GAR+QIK+RLEEKG ITDDR+LF+AAC
Sbjct: 739 NPHALLAKVLIDEVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRVLFSAAC 798
Query: 668 YAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
YAAKVTL ALGE+F+AAR IM WLGDCAKVIA E+Q V WTTPLGLPVVQPY KT+RHL+
Sbjct: 799 YAAKVTLTALGELFQAARDIMGWLGDCAKVIASEDQPVRWTTPLGLPVVQPYYKTQRHLI 858
>Q52GZ3_SPIOL (tr|Q52GZ3) DNA-directed RNA polymerase OS=Spinacia oleracea
GN=rpoT3 PE=2 SV=1
Length = 989
Score = 1022 bits (2642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/728 (66%), Positives = 590/728 (81%), Gaps = 5/728 (0%)
Query: 1 MRAEQEVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLG 60
+R E + E E ++ LRRRQI+AETEAW APNLP+VK+L LG
Sbjct: 142 LRLEFKEIEREKYNLLRRRQIKAETEAWESMVEEYREFVREMRDKKLAPNLPQVKALFLG 201
Query: 61 WFEPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVM-ENEEGCV 119
WFEPLK+A+E EQK+ RS+KQ+A ++D LPA K+AVIVMHKMMSL+M N+ GCV
Sbjct: 202 WFEPLKKAIEKEQKSQ--RSRKQKAIYGYHIDMLPADKMAVIVMHKMMSLLMVGNDAGCV 259
Query: 120 QLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRK 179
+LVQAA+QIG A+EQE++IH FLE K++ +K +D E+L +KE QR V LIKRK
Sbjct: 260 RLVQAALQIGTAIEQEIKIHSFLEKTKNI--RKNASDLPEDLLKEKEIQRNRVKSLIKRK 317
Query: 180 KLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHG 239
+L E ++ E+ WS+ QAKLGSRLIELLI+TAY+ P +QSADTPPD+RPAFRH
Sbjct: 318 RLFEAAKLVTSEDSKSWSQDTQAKLGSRLIELLIDTAYIQHPTSQSADTPPDVRPAFRHK 377
Query: 240 FKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLF 299
FK + GQ+++K YGVI+CDPLVL G+++ A++ K WKGYDKGG+LF
Sbjct: 378 FKILNNELGQQVVKRYGVIECDPLVLKGIDRSARYMIIPYVPMLIPPKNWKGYDKGGYLF 437
Query: 300 LPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGN 359
LPSY+MRTHGSRKQQD M+ +QMQKVFEAL+ LG+TK RIN ++L VVE++WA GGN
Sbjct: 438 LPSYVMRTHGSRKQQDAMRKTPPQQMQKVFEALNTLGHTKWRINRKVLGVVENLWASGGN 497
Query: 360 VAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKD 419
+ GLV+C++VPLP+KP TED +I WK+ VRKAKK+N ERH+ RCD ELK+SVA+KMKD
Sbjct: 498 IGGLVNCDDVPLPEKPLTEDPAEIDTWKWSVRKAKKINRERHALRCDVELKISVAQKMKD 557
Query: 420 EDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYA 479
E+ FYYPHNLDFRGRAYPMHPHLNHL SDLCRG+LEFA GRPLGK+GL WLKIHLAN+YA
Sbjct: 558 EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFASGRPLGKTGLHWLKIHLANVYA 617
Query: 480 GGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSS 539
GG++KLSY+ R FVENH+ ++FDSA NP+NGNRWWL AEDPFQCLAACI+L+ AL SSS
Sbjct: 618 GGVDKLSYEARAAFVENHLEEVFDSATNPINGNRWWLSAEDPFQCLAACIDLTGALNSSS 677
Query: 540 PNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRR 599
P+S IS+LPIHQDGSCNGLQHYAALGRD EAAAVNLVA E+PADVYSEIAVRV +IM +
Sbjct: 678 PHSFISYLPIHQDGSCNGLQHYAALGRDSKEAAAVNLVAGEEPADVYSEIAVRVREIMEK 737
Query: 600 DSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDD 659
DS KDP T P+A+LAKVL+DQ+DRKLVKQTVMTSVYGVT++GAR+QIK+RLEEKG+ITDD
Sbjct: 738 DSRKDPKTDPHAVLAKVLVDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGVITDD 797
Query: 660 RLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPY 719
RLLF+AACY+AKVT++ALG++F+AARGIM WLGDCAKVIA ENQ V WTTPLGLPVVQPY
Sbjct: 798 RLLFSAACYSAKVTMSALGQLFQAARGIMDWLGDCAKVIASENQPVRWTTPLGLPVVQPY 857
Query: 720 CKTERHLV 727
CK++RHL+
Sbjct: 858 CKSKRHLI 865
>M4FDQ9_BRARP (tr|M4FDQ9) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra039230 PE=3 SV=1
Length = 979
Score = 1017 bits (2630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/716 (66%), Positives = 582/716 (81%), Gaps = 6/716 (0%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
FD+LRRRQ++ ETEAW APNLP VK + LGWF+PLKE +E E
Sbjct: 145 FDSLRRRQVKEETEAWERMVEEYRDLEKEMCEKSLAPNLPYVKHMFLGWFQPLKEVIERE 204
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVME-NEEGCVQLVQAAVQIGMA 131
Q+ + +SKK +A+ AP+++ LPA K+AVIVMHKMM LVM +E+GC+Q+VQAAV IG+A
Sbjct: 205 QRLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCIQVVQAAVSIGIA 264
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQE 191
+E EVRIH FL+ + K D++E L DK+ RK VN LI+RK++ + V+K E
Sbjct: 265 IEHEVRIHNFLKRTR----KNNAGDSQEELK-DKQLLRKRVNSLIRRKRIIDALKVVKSE 319
Query: 192 EVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKI 251
+ PW RA QAKLGSRL+ELL+ETAYV P+ QS D+ P+ RPAFRH FK ++ PG K+
Sbjct: 320 GIKPWGRATQAKLGSRLLELLMETAYVQPPLTQSGDSIPEFRPAFRHKFKTVTKYPGSKL 379
Query: 252 LKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSR 311
++ YGVI+CD L+LAGL+K AKH K+W+GYDKGG+LFLPSYIMRTHGS+
Sbjct: 380 VRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWRGYDKGGYLFLPSYIMRTHGSK 439
Query: 312 KQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPL 371
KQQD +K++ + +VFEALD LGNTK R+N ++LDVVE +WA GGN+AGLV+ E+VP+
Sbjct: 440 KQQDALKDISSKTAHRVFEALDTLGNTKWRVNRKILDVVERLWADGGNIAGLVNREDVPI 499
Query: 372 PDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDF 431
P+KP +ED +++Q WK+ VRKAKK N ERHS RCD ELKLSVARKMKDE+ FYYPHNLDF
Sbjct: 500 PEKPSSEDPEELQSWKWSVRKAKKTNRERHSLRCDVELKLSVARKMKDEEGFYYPHNLDF 559
Query: 432 RGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRL 491
RGRAYPMHPHLNHL SDLCRG LEFAEGRPLGKSGL WLKIHLANLYAGG+EKLS++GRL
Sbjct: 560 RGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLYWLKIHLANLYAGGVEKLSHEGRL 619
Query: 492 GFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQ 551
FVENH+ DI DSA+N ++G RWWL+AEDPFQCLAAC+ L++AL+S SP SVISHLPIHQ
Sbjct: 620 SFVENHLDDIMDSAENAIHGRRWWLKAEDPFQCLAACVVLAQALKSPSPYSVISHLPIHQ 679
Query: 552 DGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNA 611
DGSCNGLQHYAALGRD EAAAVNLVA EKPADVYSEI++RVH+IM++DS+KDP + P A
Sbjct: 680 DGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISLRVHEIMKKDSSKDPESNPTA 739
Query: 612 LLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAK 671
LAK+LI+Q+DRKLVKQTVMTSVYGVTY+GAR+QIK+RLEEKG+ITD+R+LF+AACY+AK
Sbjct: 740 ALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDERMLFSAACYSAK 799
Query: 672 VTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
VTLAALGE+FEAAR IMSWLGDCAK+IA +N V WTTPLGLPVVQPYC++ERHL+
Sbjct: 800 VTLAALGEIFEAARAIMSWLGDCAKIIATDNHPVRWTTPLGLPVVQPYCRSERHLI 855
>R0HH96_9BRAS (tr|R0HH96) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10025273mg PE=4 SV=1
Length = 991
Score = 1014 bits (2621), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/730 (65%), Positives = 584/730 (80%), Gaps = 10/730 (1%)
Query: 1 MRAEQEVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLG 60
++ E + + FD+LRRRQ++ ETEAW APNLP VK + LG
Sbjct: 145 VKIEHKYIDKRKFDSLRRRQVKEETEAWEKMVDEYRDLEKEMCEKNLAPNLPYVKHMFLG 204
Query: 61 WFEPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVME-NEEGCV 119
WF+PLK+ +E EQK + +SKK +A+ AP+++ LPA K+AVIVMHKMM LVM +E+GC+
Sbjct: 205 WFQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCI 264
Query: 120 QLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQ--RKFVNGLIK 177
Q+VQAAV IG+A+EQEVRIH FL+ + K D++E L KEKQ RK VN LI+
Sbjct: 265 QVVQAAVSIGIAIEQEVRIHNFLKRTR----KNNAGDSQEEL---KEKQLLRKRVNSLIR 317
Query: 178 RKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFR 237
RK++ + V+K E + PW RA QAKLGSRL+ELLIETAYV P+ QS D+ P+ RPAFR
Sbjct: 318 RKRIIDALKVVKSEGIKPWGRATQAKLGSRLLELLIETAYVQPPLTQSGDSIPEFRPAFR 377
Query: 238 HGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGH 297
H FK ++ PG K+++ YGVI+CD L+LAGL+K AKH K+WKGYDKGG+
Sbjct: 378 HKFKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMIIPYVPMLVPPKRWKGYDKGGY 437
Query: 298 LFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGG 357
LFLPSYIMRTHGS+KQQD ++++ + +VFEALD LGNTK R+N ++LDVVE +WA G
Sbjct: 438 LFLPSYIMRTHGSKKQQDALRDISSKTAHRVFEALDTLGNTKWRVNRKILDVVERLWADG 497
Query: 358 GNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKM 417
GN+AGLV+ E+VP+P+KP +ED +++Q WK+ VRKA K+N ERHS RCD ELKLSVARKM
Sbjct: 498 GNIAGLVNREDVPIPEKPSSEDPEELQSWKWSVRKANKINRERHSLRCDVELKLSVARKM 557
Query: 418 KDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANL 477
KDE+ FYYPHNLDFRGRAYPMHPHLNHL SDLCRG LEFAEGRPLGKSGL WLKIHLANL
Sbjct: 558 KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANL 617
Query: 478 YAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRS 537
YAGG+EKLS+D RL FVE H+ D+ DSA+NP++G RWWL+AEDPFQCLAAC+ L++AL+S
Sbjct: 618 YAGGVEKLSHDARLAFVETHLDDVMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKS 677
Query: 538 SSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIM 597
SP SVISHLPIHQDGSCNGLQHYAALGRD EAAAVNLVA EKPADVYSEI+ RVH+IM
Sbjct: 678 PSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIM 737
Query: 598 RRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLIT 657
++DS+KDP + P A LAK+LI Q+DRKLVKQTVMTSVYGVTY+GAR+QIK+RLEEKG+IT
Sbjct: 738 KKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIT 797
Query: 658 DDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQ 717
D+R+LF AACY+AKVTLAALGE+FEAAR IMSWLGDCAK+IA +N V W TPLGLPVVQ
Sbjct: 798 DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQ 857
Query: 718 PYCKTERHLV 727
PYC++ERHL+
Sbjct: 858 PYCRSERHLI 867
>D7LGR7_ARALL (tr|D7LGR7) DNA-directed RNA polymerase OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_481268 PE=3 SV=1
Length = 990
Score = 1011 bits (2614), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/730 (65%), Positives = 583/730 (79%), Gaps = 10/730 (1%)
Query: 1 MRAEQEVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLG 60
++ E++ + FD+LRRRQ++ ETEAW APNLP VK + LG
Sbjct: 144 LKIERKDIDKRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLG 203
Query: 61 WFEPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVME-NEEGCV 119
WF+PLK+ +E EQK + +SKK +A+ AP+++ LPA K+AVIVMHKMM LVM +E+GC+
Sbjct: 204 WFQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCI 263
Query: 120 QLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQ--RKFVNGLIK 177
Q+VQAAV IG+A+EQEVRIH FL+ + K D++E L KEKQ RK VN LI+
Sbjct: 264 QVVQAAVSIGIAIEQEVRIHNFLKRTR----KNNAGDSQEEL---KEKQLLRKRVNSLIR 316
Query: 178 RKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFR 237
RK++ + V+K E PW RA QAKLGSRL+ELLIE AYV P+ QS D+ P+ RPAFR
Sbjct: 317 RKRIIDALKVVKTEGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFR 376
Query: 238 HGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGH 297
H FK ++ PG K+++ YGVI+CD L+LAGL+K AKH K+WKGYDKGG+
Sbjct: 377 HKFKTVTKYPGSKMVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGY 436
Query: 298 LFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGG 357
LFLPSYIMRTHGS+KQQD ++++ + +VFEALD LGNTK R+N +LDVVE +WA G
Sbjct: 437 LFLPSYIMRTHGSKKQQDALRDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADG 496
Query: 358 GNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKM 417
GN+AGLV+ E+VP+P+KP +ED ++IQ WK+ VRKA K+N ERHS RCD ELKLSVARKM
Sbjct: 497 GNIAGLVNREDVPIPEKPSSEDPEEIQSWKWSVRKANKINRERHSLRCDVELKLSVARKM 556
Query: 418 KDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANL 477
KDE+ FYYPHNLDFRGRAYPMHPHLNHL SDLCRG LEFAEGRPLGKSGL WLKIHLANL
Sbjct: 557 KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANL 616
Query: 478 YAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRS 537
+AGG+EKLS+D RL FVENH+ DI DSA+NP++G RWWL+AEDPFQCLAAC+ L++ALRS
Sbjct: 617 FAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALRS 676
Query: 538 SSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIM 597
SP SVISHLPIHQDGSCNGLQHYAALGRD EAAAVNLVA EKPADVYSEI+ RVH+IM
Sbjct: 677 PSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIM 736
Query: 598 RRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLIT 657
++DS+KDP + P A LAK+LI Q+DRKLVKQTVMTSVYGVTY+GAR+QIK+RLEEKG+IT
Sbjct: 737 KKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIT 796
Query: 658 DDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQ 717
D+R+LF AACY+AKVTLAALGE+FEAAR IMSWLGDCAK+IA +N V W TPLGLPVVQ
Sbjct: 797 DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQ 856
Query: 718 PYCKTERHLV 727
PYC++ERHL+
Sbjct: 857 PYCRSERHLI 866
>Q0WN04_ARATH (tr|Q0WN04) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=At2g24120 PE=2 SV=1
Length = 993
Score = 1009 bits (2609), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/730 (65%), Positives = 582/730 (79%), Gaps = 10/730 (1%)
Query: 1 MRAEQEVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLG 60
++ E++ + FD+LRRRQ++ ETEAW APNLP VK + LG
Sbjct: 147 LKIERKDIDKRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLG 206
Query: 61 WFEPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVME-NEEGCV 119
WF+PLK+ +E EQK + +SKK +A+ AP+++ LPA K+AVIVMHKMM LVM +E+GC+
Sbjct: 207 WFQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCI 266
Query: 120 QLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQ--RKFVNGLIK 177
Q+VQAAV IG+A+EQEVRIH FL+ + K D++E L KEKQ RK VN LI+
Sbjct: 267 QVVQAAVSIGIAIEQEVRIHNFLKRTR----KNNAGDSQEEL---KEKQLLRKRVNSLIR 319
Query: 178 RKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFR 237
RK++ + V+K E PW RA QAKLGSRL+ELLIE AYV P+ QS D+ P+ RPAFR
Sbjct: 320 RKRIIDALKVVKSEGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFR 379
Query: 238 HGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGH 297
H FK ++ PG K+++ YGVI+CD L+LAGL+K AKH K+WKGYDKGG+
Sbjct: 380 HRFKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGY 439
Query: 298 LFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGG 357
LFLPSYIMRTHGS+KQQD +K++ + +VFEALD LGNTK R+N +LDVVE +WA G
Sbjct: 440 LFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADG 499
Query: 358 GNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKM 417
GN+AGLV+ E+VP+P+KP +ED +++Q WK+ RKA K+N ERHS RCD ELKLSVARKM
Sbjct: 500 GNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKM 559
Query: 418 KDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANL 477
KDE+ FYYPHNLDFRGRAYPMHPHLNHL SDLCRG LEFAEGRPLGKSGL WLKIHLANL
Sbjct: 560 KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANL 619
Query: 478 YAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRS 537
YAGG+EKLS+D RL FVENH+ DI DSA+NP++G RWWL+AEDPFQCLAAC+ L++AL+S
Sbjct: 620 YAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKS 679
Query: 538 SSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIM 597
SP SVISHLPIHQDGSCNGLQHYAALGRD EAAAVNLVA EKPADVYSEI+ RVH+IM
Sbjct: 680 PSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIM 739
Query: 598 RRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLIT 657
++DS+KDP + P A LAK+LI Q+DRKLVKQTVMTSVYGVTY+GAR+QIK+RLEEKG+IT
Sbjct: 740 KKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIT 799
Query: 658 DDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQ 717
D+R+LF AACY+AKVTLAALGE+FEAAR IMSWLGDCAK+IA +N V W TPLGLPVVQ
Sbjct: 800 DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQ 859
Query: 718 PYCKTERHLV 727
PYC++ERHL+
Sbjct: 860 PYCRSERHLI 869
>F4INQ5_ARATH (tr|F4INQ5) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=SCA3 PE=2 SV=1
Length = 895
Score = 1007 bits (2604), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/730 (65%), Positives = 582/730 (79%), Gaps = 10/730 (1%)
Query: 1 MRAEQEVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLG 60
++ E++ + FD+LRRRQ++ ETEAW APNLP VK + LG
Sbjct: 147 LKIERKDIDKRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLG 206
Query: 61 WFEPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVME-NEEGCV 119
WF+PLK+ +E EQK + +SKK +A+ AP+++ LPA K+AVIVMHKMM LVM +E+GC+
Sbjct: 207 WFQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCI 266
Query: 120 QLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQ--RKFVNGLIK 177
Q+VQAAV IG+A+EQEVRIH FL+ + K D++E L KEKQ RK VN LI+
Sbjct: 267 QVVQAAVSIGIAIEQEVRIHNFLKRTR----KNNAGDSQEEL---KEKQLLRKRVNSLIR 319
Query: 178 RKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFR 237
RK++ + V+K E PW RA QAKLGSRL+ELLIE AYV P+ QS D+ P+ RPAFR
Sbjct: 320 RKRIIDALKVVKSEGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFR 379
Query: 238 HGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGH 297
H FK ++ PG K+++ YGVI+CD L+LAGL+K AKH K+WKGYDKGG+
Sbjct: 380 HRFKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGY 439
Query: 298 LFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGG 357
LFLPSYIMRTHGS+KQQD +K++ + +VFEALD LGNTK R+N +LDVVE +WA G
Sbjct: 440 LFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADG 499
Query: 358 GNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKM 417
GN+AGLV+ E+VP+P+KP +ED +++Q WK+ RKA K+N ERHS RCD ELKLSVARKM
Sbjct: 500 GNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKM 559
Query: 418 KDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANL 477
KDE+ FYYPHNLDFRGRAYPMHPHLNHL SDLCRG LEFAEGRPLGKSGL WLKIHLANL
Sbjct: 560 KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANL 619
Query: 478 YAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRS 537
YAGG+EKLS+D RL FVENH+ DI DSA+NP++G RWWL+AEDPFQCLAAC+ L++AL+S
Sbjct: 620 YAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKS 679
Query: 538 SSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIM 597
SP SVISHLPIHQDGSCNGLQHYAALGRD EAAAVNLVA EKPADVYSEI+ RVH+IM
Sbjct: 680 PSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIM 739
Query: 598 RRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLIT 657
++DS+KDP + P A LAK+LI Q+DRKLVKQTVMTSVYGVTY+GAR+QIK+RLEEKG+IT
Sbjct: 740 KKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVIT 799
Query: 658 DDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQ 717
D+R+LF AACY+AKVTLAALGE+FEAAR IMSWLGDCAK+IA +N V W TPLGLPVVQ
Sbjct: 800 DERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQ 859
Query: 718 PYCKTERHLV 727
PYC++ERHL+
Sbjct: 860 PYCRSERHLI 869
>K4CB64_SOLLC (tr|K4CB64) DNA-directed RNA polymerase OS=Solanum lycopersicum
GN=Solyc07g005930.2 PE=3 SV=1
Length = 992
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/710 (67%), Positives = 574/710 (80%), Gaps = 8/710 (1%)
Query: 20 QIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKAHQAR 79
QI+AETEAW APNLP VK L+LGWFEPL++A+E EQ A
Sbjct: 165 QIKAETEAWEQMVEEYRELEREMCEKKLAPNLPYVKKLMLGWFEPLRQAIEREQNAEM-- 222
Query: 80 SKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMEN--EEGCVQLVQAAVQIGMALEQEVR 137
++K + + AP++DSLPA K+AVIVMHK+M L+M EE CVQ+VQAAVQIGMA+E EVR
Sbjct: 223 TQKHRTAYAPHIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVR 282
Query: 138 IHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWS 197
IH F+E K Q T A +E+++ + RK V LIKR ++ EV +++ EE W
Sbjct: 283 IHNFMEKTKKHQKHMTGAQGQEDMSRETMILRKRVKSLIKRNRVVEVRKLMQSEEPESWG 342
Query: 198 RAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGV 257
R QAKLG RL+ELL ETAYV PV+QSADTPPDIRPAFRH F+ +R PG+ I+K YGV
Sbjct: 343 RDTQAKLGCRLLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKNIVKKYGV 402
Query: 258 IQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVM 317
I+CDPLV+ G+++ K KKW+GYDKGG+LFLPSY+MRTHGSR+QQD +
Sbjct: 403 IECDPLVVVGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAV 462
Query: 318 KNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPT 377
++V +QMQ+V+EALD LG+TK R+N R+L VVE+IWAGGGN+AGLVD ++VP+P+ +
Sbjct: 463 RSVPAKQMQQVYEALDTLGSTKWRVNKRILSVVETIWAGGGNIAGLVDRKDVPIPELH-S 521
Query: 378 EDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYP 437
+D+ +++ WK+RVRKAKK+N E HSQRCDTELKLSVARK++DE+ FYYPHNLDFRGRAYP
Sbjct: 522 DDIMELKRWKWRVRKAKKINQELHSQRCDTELKLSVARKLRDEEGFYYPHNLDFRGRAYP 581
Query: 438 MHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENH 497
MHPHLNHL SDLCRG+LEFAEGRPLGKSGLRWLK+HLA+LYAGGIEKL YD R+ FVENH
Sbjct: 582 MHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVENH 641
Query: 498 IHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNG 557
I DI DSA NP+NGNRWWL AEDP QCLAACINLSEA++S SP++VISHLPIHQDGSCNG
Sbjct: 642 IDDILDSAHNPLNGNRWWLNAEDPLQCLAACINLSEAVKSLSPHTVISHLPIHQDGSCNG 701
Query: 558 LQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVL 617
LQHYAALGRD +EAAAVNLVA EKPADVY+EIA+RV I+R DS KDP+T PNALLAK+L
Sbjct: 702 LQHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAKLL 761
Query: 618 IDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAAL 677
IDQ+DRKLVKQTVMTSVYGVTY+GAR+QIK+RLEEKGLI DDRLLFTA+CY VTLAAL
Sbjct: 762 IDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCY---VTLAAL 818
Query: 678 GEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
GE+F+AARG M+WLGDCAKVIA ENQ V WTTPLGLPVVQPY KT+RH++
Sbjct: 819 GELFQAARGTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVI 868
>M0S096_MUSAM (tr|M0S096) DNA-directed RNA polymerase OS=Musa acuminata subsp.
malaccensis PE=3 SV=1
Length = 1767
Score = 967 bits (2500), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/726 (64%), Positives = 568/726 (78%), Gaps = 7/726 (0%)
Query: 6 EVREAE--TFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFE 63
E R AE +++LRRRQI+AETEAW AP+LP VKSL LGWFE
Sbjct: 889 ESRRAERRKYNSLRRRQIKAETEAWERAAQEYKELEREMLEKKLAPSLPYVKSLFLGWFE 948
Query: 64 PLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVM-ENEEGCVQLV 122
PL++ +E EQ+ ++K Q+A+ AP++ LPA K+AVIVMHKMM L+M E+GC++LV
Sbjct: 949 PLRDVIEREQRLQ--KTKMQKAAYAPHIGLLPADKMAVIVMHKMMGLLMVGQEDGCIRLV 1006
Query: 123 QAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLK 182
QAA++IG A+EQE +I +LE +K + +K E D L +E RK V LIK KKL
Sbjct: 1007 QAAIRIGEAIEQEFKIQAYLEKSKRPRRRKNEGDRNVILCTQQEILRKKVMKLIKMKKLI 1066
Query: 183 EVHVVLKQE-EVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFK 241
EV +L+ E E+ W R QAKLGSRLIELL+E+A+V P + AD PP+I PAFRH FK
Sbjct: 1067 EVQKLLRNEIEMESWGRDGQAKLGSRLIELLLESAFVQVPCDSLADCPPEILPAFRHTFK 1126
Query: 242 PQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLP 301
S+ G+ I YGVI+CDPLV G + A+H K WKGYD GGHLFLP
Sbjct: 1127 NISKENGKSI-NRYGVIECDPLVHKGFDSTARHMVIPYLPMLIPPKSWKGYDNGGHLFLP 1185
Query: 302 SYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVA 361
SY+MRTHG+++QQ +K+V +Q+QKVFEALD LG TK RIN R+LDV+E +W+ GG +A
Sbjct: 1186 SYVMRTHGAQEQQKAIKSVPRKQLQKVFEALDTLGRTKWRINRRILDVIEIVWSRGGGIA 1245
Query: 362 GLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDED 421
GLVD +++ LPD+P TEDL +I++W++ RKAKK N E H+QRCD ELKLSVA KM+DE+
Sbjct: 1246 GLVDRKDIQLPDRPETEDLTEIKKWRWSTRKAKKANSEMHAQRCDVELKLSVAHKMRDEE 1305
Query: 422 CFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGG 481
FYYPHN+DFRGRAYPMH HLNHL SDLCRG+LEFAEG+PLGKSGL WLKIHLAN+Y GG
Sbjct: 1306 GFYYPHNIDFRGRAYPMHSHLNHLSSDLCRGILEFAEGKPLGKSGLHWLKIHLANIYGGG 1365
Query: 482 IEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPN 541
+EKLSYD RL FV+NH+ DIFDSA+NP++GNRWW+ AEDPFQCLAACI+L++AL+SSSP+
Sbjct: 1366 VEKLSYDRRLTFVKNHLRDIFDSAENPIDGNRWWISAEDPFQCLAACIDLTKALKSSSPH 1425
Query: 542 SVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDS 601
ISHLPIHQDGSCNGLQHYAALGRD LEAAAVNLVA EKPADVYSEIA+RV +I+R+DS
Sbjct: 1426 MAISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAMRVREIIRKDS 1485
Query: 602 NKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRL 661
KDP+ P ALLAKVL+DQ+DRKLVKQTVMTSVYGVTY+GAR+QIK+RLEEKGLITDDRL
Sbjct: 1486 EKDPTVDPTALLAKVLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRL 1545
Query: 662 LFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCK 721
LF A+CYAAKVTL ALGE+FEAARGIM WLGDCAK+IA EN+ V WTTPLGLPVVQPY
Sbjct: 1546 LFGASCYAAKVTLNALGEMFEAARGIMKWLGDCAKIIASENEPVKWTTPLGLPVVQPYRN 1605
Query: 722 TERHLV 727
+ERH +
Sbjct: 1606 SERHQI 1611
>M4ETI9_BRARP (tr|M4ETI9) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra032120 PE=4 SV=1
Length = 940
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/730 (63%), Positives = 575/730 (78%), Gaps = 23/730 (3%)
Query: 1 MRAEQEVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLG 60
++ E++ + FD+LRRRQ++ ETEAW APNLP VK + LG
Sbjct: 127 LKLEKKDIDKRKFDSLRRRQVKEETEAWERMVDEYRELEKEMCEKSLAPNLPYVKHMFLG 186
Query: 61 WFEPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVME-NEEGCV 119
WF+PL++ +E EQ+ +++SKK +A+ AP+++ LPA K+AVIVMHKMM LVM +E+GC+
Sbjct: 187 WFQPLRDVIEREQRLQKSKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCI 246
Query: 120 QLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRK 179
Q+VQAAV IG+A+E EV IH FL+ + K D++E + DK+ RK VN LI+RK
Sbjct: 247 QVVQAAVSIGIAIEHEVGIHNFLKRTR----KNNAGDSQEEVK-DKQLLRKRVNSLIRRK 301
Query: 180 KLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHG 239
++ + V+K E + PW RA QAKLGSRL+ELL+ETAYV P+ QS D+ P++RPAFRH
Sbjct: 302 RIIDALKVVKSEGIKPWGRATQAKLGSRLLELLMETAYVQPPLTQSGDSIPEVRPAFRHK 361
Query: 240 FKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLF 299
FK ++ PG K+++ YGVI+CD L+LAGL+K AKH K+WKGYDKGG+LF
Sbjct: 362 FKTVTKYPGSKMVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLF 421
Query: 300 LPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGN 359
LPSYIMRTHGS+KQQD +K++ + +VFEALD LGNTK R+N ++LDVVE +WA GGN
Sbjct: 422 LPSYIMRTHGSKKQQDALKDISSKTAHRVFEALDTLGNTKWRVNRKILDVVEKLWADGGN 481
Query: 360 VAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKD 419
+AGLV+ E+VP+P+KP +ED ++IQ WK+ VRKAKK+N ERHS RCD ELKLSVARKMKD
Sbjct: 482 IAGLVNREDVPIPEKPLSEDPEEIQTWKWSVRKAKKINRERHSLRCDVELKLSVARKMKD 541
Query: 420 EDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYA 479
E+ FYYPHNLDFRGRAYPMHPHLNHL SDLCRG LEFAEGRPLGKSGL WLKIHLANLYA
Sbjct: 542 EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLYWLKIHLANLYA 601
Query: 480 GGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSS 539
GG+EKLS+DGRL FVENH+ DI DSA+N V+G RWWL+AEDPFQCLAAC+ L++AL+S S
Sbjct: 602 GGVEKLSHDGRLAFVENHLDDIIDSAENAVHGKRWWLKAEDPFQCLAACVILAQALKSPS 661
Query: 540 PNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRR 599
P+SVIS+LPIHQ EAAAVNLVA +KPADVYSEI++RVH+IM++
Sbjct: 662 PHSVISNLPIHQ-----------------FEAAAVNLVAGDKPADVYSEISLRVHEIMKK 704
Query: 600 DSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDD 659
DS+KDP + P A LAK+LI+Q+DRKLVKQTVMTSVYGVTY+GAR+QIK+RLEEKG+ITD+
Sbjct: 705 DSSKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDE 764
Query: 660 RLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPY 719
R+LF AACY+AKVTLAALGE+FEAAR IMSWLGDCAK+IA +N V WTTPLGLPVVQPY
Sbjct: 765 RMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPY 824
Query: 720 CKTERHLVSL 729
C++ERHLV +
Sbjct: 825 CRSERHLVDV 834
>B9SQY6_RICCO (tr|B9SQY6) DNA-directed RNA polymerase 3B, chloroplast, putative
OS=Ricinus communis GN=RCOM_1406230 PE=4 SV=1
Length = 1000
Score = 965 bits (2494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/726 (66%), Positives = 555/726 (76%), Gaps = 34/726 (4%)
Query: 9 EAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEA 68
E ++ LRRRQI ETEAW APNLP VK L LGWFEPLKE
Sbjct: 146 EKRKYNLLRRRQIREETEAWERMVEEYKALVKEMCERKLAPNLPYVKGLFLGWFEPLKEG 205
Query: 69 VEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVM-ENEEGCVQLVQAAVQ 127
+++EQ RSKK +A+ AP+++ LPA K+AVIVMHKM+ L+M +E+GCV LVQAAVQ
Sbjct: 206 IKSEQNLQ--RSKKNKAAFAPHIELLPADKMAVIVMHKMVGLLMVGHEDGCVPLVQAAVQ 263
Query: 128 IGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVV 187
IGMA+EQEVRIH FLE K+ Q KKT + +E+L +KE RK VN LI+RKKL EV +
Sbjct: 264 IGMAIEQEVRIHNFLEKTKNYQRKKTISGAQESLGKEKEILRKRVNSLIRRKKLIEVQKL 323
Query: 188 LKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSP 247
+K EE+ PW R QAKLGSRLIELL ETA+V PVNQSAD PPD+RPAFRH F+ +P
Sbjct: 324 VKNEEMKPWGRDTQAKLGSRLIELLTETAFVQPPVNQSADVPPDVRPAFRHRFRIVKNNP 383
Query: 248 GQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT 307
GQKI+K YGVI+C+PLVL GL+ AKH KKWKGY+KGGH FLPSYIMRT
Sbjct: 384 GQKIVKKYGVIECNPLVLKGLDGSAKHMLIPYFPMLVPPKKWKGYNKGGHFFLPSYIMRT 443
Query: 308 HGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVD-- 365
HGSRKQQD +KNV MQKVFEALD LGNTK R+N R+LDVVESIWA GGN+AGLVD
Sbjct: 444 HGSRKQQDALKNVPRNHMQKVFEALDTLGNTKWRVNRRVLDVVESIWARGGNIAGLVDRK 503
Query: 366 ---C-ENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDED 421
C ++ LP + E ++ RKAKK N ERH VARK+KDE+
Sbjct: 504 DAGCHQSALLPVLMLFMKTDRTSEVRWSARKAKKTNRERHLN--------DVARKLKDEE 555
Query: 422 CFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGG 481
FYYPHNLDFRGRAYPMHPHL HL SDLCRG+LEFAEGRPLGKSGLRWLKIHLANLY+GG
Sbjct: 556 GFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYSGG 615
Query: 482 IEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPN 541
+EKLS+DGRL FVE+H+ DIFDSA+NPVNGNRWWL AEDPFQCLAACINLSEAL+SSSP+
Sbjct: 616 VEKLSHDGRLAFVEDHLADIFDSAENPVNGNRWWLTAEDPFQCLAACINLSEALKSSSPH 675
Query: 542 SVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDS 601
+VISHLPIHQ EAAAVNLVA EKPADVY+EIA RVH+++ RDS
Sbjct: 676 TVISHLPIHQP-----------------EAAAVNLVAGEKPADVYTEIAARVHELIERDS 718
Query: 602 NKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRL 661
NKDP+T PNALLAK+LIDQ+DRKLVKQTVMTSVYGVTY+GAR+QIK+RLEEKG ITDDRL
Sbjct: 719 NKDPATNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGQITDDRL 778
Query: 662 LFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCK 721
LF+A+CY AKVTL ALGE+F+AAR IM WLGDCAKVIA E+Q V WTTPLGLPVVQPY K
Sbjct: 779 LFSASCYTAKVTLTALGELFQAARDIMGWLGDCAKVIASEDQPVQWTTPLGLPVVQPYYK 838
Query: 722 TERHLV 727
+ERHL+
Sbjct: 839 SERHLI 844
>E1V2K4_NUPAD (tr|E1V2K4) DNA-directed RNA polymerase OS=Nuphar advena GN=rpoTp
PE=3 SV=1
Length = 985
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/727 (61%), Positives = 559/727 (76%), Gaps = 3/727 (0%)
Query: 3 AEQEVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWF 62
A + RE+ ++ LRRRQ++ ETEAW AP+LP VKSL LGWF
Sbjct: 136 ARERERESSKYNLLRRRQVKMETEAWEDAAREYRELIKEMCEKKLAPHLPYVKSLFLGWF 195
Query: 63 EPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVME-NEEGCVQL 121
EP ++A++ +Q+ + R K A+ AP + LPA +AVIVMHKMM L+M ++GCV+L
Sbjct: 196 EPFRDAIKEDQELQRRRKKNLAAAYAPFIGHLPADMMAVIVMHKMMVLLMNGQDDGCVRL 255
Query: 122 VQAAVQIGMALEQEVRIHKFLEG-NKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKK 180
V AA IG A+EQEVRI+ F + KS + + ++ EN + ++E RK V L+K+KK
Sbjct: 256 VHAACHIGEAIEQEVRIYNFFQKIKKSTRENQILSENHENESKNQEALRKRVTNLLKKKK 315
Query: 181 LKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGF 240
+++V ++++ ++V PW R + AKLGSR I+LLI+T YV P+NQ A+ PP+IRPAFRH F
Sbjct: 316 IRDVQLLVEADDVEPWGRDSHAKLGSRXIDLLIQTXYVQPPLNQLAZGPPEIRPAFRHTF 375
Query: 241 KPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFL 300
K + + K YG+I+CDPLV GL+ A+H KKW GYDKGGHLFL
Sbjct: 376 KTXKKEXDNSV-KRYGIIECDPLVRKGLDATARHLVIPYMPMLIPPKKWTGYDKGGHLFL 434
Query: 301 PSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNV 360
PSY+MRTHG+++Q+D +K+V Q+++VFEALD LG+TK R+N R+LDV++S+WA G +
Sbjct: 435 PSYVMRTHGAKQQRDALKSVPKXQLKEVFEALDTLGSTKWRVNKRVLDVIDSLWASGRPI 494
Query: 361 AGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDE 420
AGLVD ++ LP+KP TED Q++ W++ V+K KK N ERH+QRCD ELKLSVARKM+ E
Sbjct: 495 AGLVDHSDIALPEKPCTEDEAQMRRWRWSVKKVKKENCERHAQRCDIELKLSVARKMRKE 554
Query: 421 DCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAG 480
D FYYPHNLDFRGRAYPMHPHLNHLGSDLCRG+LEFAEG+PLGK+GLRWLKIHLANLY G
Sbjct: 555 DGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGKPLGKTGLRWLKIHLANLYGG 614
Query: 481 GIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSP 540
G++KLS+DGRL FVENH+ DIFDSA+ P+ G +WWL AEDPFQCLAACI+LS AL+SSSP
Sbjct: 615 GVDKLSFDGRLTFVENHLADIFDSAERPIEGRQWWLNAEDPFQCLAACIDLSXALKSSSP 674
Query: 541 NSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRD 600
ISH+P+H DGSCNGLQHYAALGRD L AA+VNLV+ EKP DVYS IA RV +I+ RD
Sbjct: 675 EDAISHIPVHLDGSCNGLQHYAALGRDRLGAASVNLVSGEKPXDVYSGIAARVMEIVVRD 734
Query: 601 SNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDR 660
S KDP+ P +LLA++LIDQ+DRKLVKQTVMTSVYGVTYIGARDQIK+RL+E+ ITDD+
Sbjct: 735 SKKDPAVHPTSLLARILIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDFITDDK 794
Query: 661 LLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYC 720
LLF+AACYAAKVTL+AL E+F+AAR IMSWLGDCAKVIA EN+ V WTTPLGLPVVQPY
Sbjct: 795 LLFSAACYAAKVTLSALEEMFQAARSIMSWLGDCAKVIASENEPVRWTTPLGLPVVQPYW 854
Query: 721 KTERHLV 727
K RHLV
Sbjct: 855 KQSRHLV 861
>E1V2U0_NUPAD (tr|E1V2U0) DNA-directed RNA polymerase OS=Nuphar advena GN=rpoTm2
PE=3 SV=1
Length = 990
Score = 929 bits (2402), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/721 (63%), Positives = 556/721 (77%), Gaps = 7/721 (0%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
++AL+RRQI+ ETEAW A NLP +KSL LGWFEPL++ + +E
Sbjct: 159 YNALKRRQIKIETEAWEQAAKEYKELMMDMCKNKLAXNLPYIKSLFLGWFEPLRDRIASE 218
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMEN-EEGCVQLVQAAVQIGMA 131
Q+A R K +A+ P ++ LPA +AVI MHK++ L+M + + GC ++VQAA +IG A
Sbjct: 219 QEA--CRRGKCRAAYGPYLNRLPAEMMAVITMHKLVGLMMTSGDHGCARVVQAACRIGDA 276
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTE-ENLNNDKEKQRKFVNGLIKRKKLKEVHVVLK- 189
+E E RIH FLE K ++ A+ E E + +KE RK V LIK++KL++V ++K
Sbjct: 277 IENESRIHSFLEKTKKKHARGNMAEEEPETVTKEKEFLRKKVTNLIKKQKLRQVTKLVKG 336
Query: 190 QEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQ 249
+++ +PW A AK+G LIELLIETAY+ P++Q+ D PPDIRPAFRH + S+
Sbjct: 337 KDDSAPWGVEAHAKVGCHLIELLIETAYIQPPLDQTVDGPPDIRPAFRHSLRNVSKEQSS 396
Query: 250 KILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHG 309
+ YGVI+CDPLV GL+K A+H W GYDKG HLFLPSYIMRTHG
Sbjct: 397 NS-RRYGVIECDPLVRKGLDKTARHTVIPYMPMLVPPLCWTGYDKGAHLFLPSYIMRTHG 455
Query: 310 SRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENV 369
SR+Q++ +K +Q+Q +FEALD LG+TK RIN RLL VVE IWA GGN+AGLVDCE+
Sbjct: 456 SRQQREAVKRTPTQQLQSIFEALDTLGSTKWRINKRLLAVVERIWASGGNLAGLVDCEDA 515
Query: 370 PLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNL 429
PLP+KP TED +++WK+ +R KK N E+HSQRCD ELKLSVARKMK+E+ FYYPHNL
Sbjct: 516 PLPEKPDTEDEAVLRKWKWSLRNTKKENSEKHSQRCDVELKLSVARKMKEEEGFYYPHNL 575
Query: 430 DFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDG 489
DFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLYAGG++KLSYDG
Sbjct: 576 DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDG 635
Query: 490 RLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPI 549
RL FVENH+ DIFDSAD P+ G+RWWL AEDPFQCLAACINLSEALRSSSP++ ISH+P+
Sbjct: 636 RLAFVENHLDDIFDSADKPLEGSRWWLGAEDPFQCLAACINLSEALRSSSPDTTISHVPV 695
Query: 550 HQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFP 609
HQDGSCNGLQHYAALGRD+L AA+VNLVA EKPADVYS IA V +IMRRDS KDP+ P
Sbjct: 696 HQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIASGVLEIMRRDSQKDPANNP 755
Query: 610 NALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYA 669
+A+ A++LIDQ+DRKLVKQTVMTSVYGVTYIGARDQIKKRL+E+ +I +D+ +F AACYA
Sbjct: 756 SAVRARLLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERDVIPEDQ-VFGAACYA 814
Query: 670 AKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLVSL 729
AK TLAAL E+F+AARGIMSWLGDCAKVIA EN++V WTTPLGLPVVQPY K R LV
Sbjct: 815 AKTTLAALEEMFQAARGIMSWLGDCAKVIASENESVRWTTPLGLPVVQPYKKQGRCLVLA 874
Query: 730 L 730
L
Sbjct: 875 L 875
>Q6K326_ORYSJ (tr|Q6K326) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OSJNBa0069P02.30-1 PE=2 SV=1
Length = 951
Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/722 (62%), Positives = 550/722 (76%), Gaps = 12/722 (1%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ LRRRQI+ ETEAW APNLP VKSL LGWFEPL++ + AE
Sbjct: 177 YAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAE 236
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMA 131
Q+ R + AS A + LPA +AVI MHK+M L+M +G V+++QAA QIG A
Sbjct: 237 QELVGERGAR--ASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEA 294
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTEE-----NLNNDKEKQRKFVNGLIKRKKLKEV-H 185
+E EVRIHKFLE K +K E D EE ++ ++E+ RK V L+K++K+++V +
Sbjct: 295 IEHEVRIHKFLEKTKKKSNK--EMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRN 352
Query: 186 VVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSR 245
+V KQ+ PW + A AK+GSRLIEL+IETAY+ P +QSAD PPDIRPAF H + +R
Sbjct: 353 IVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAR 412
Query: 246 SPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIM 305
QK + YGVI+CDPLV GL++ AKH W GYDKG HLFLPSY+M
Sbjct: 413 E-QQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVM 471
Query: 306 RTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVD 365
RTHG+R+Q+D ++ EQMQ VFEAL+ LG+TK R+N R+L +V+ IW+ GG +A LVD
Sbjct: 472 RTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVD 531
Query: 366 CENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYY 425
+V LP+KP TED ++++W++ +R AKK N ERHSQRCD ELKL+VARKMKDED FYY
Sbjct: 532 RTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYY 591
Query: 426 PHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKL 485
PHNLDFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLYAGG++KL
Sbjct: 592 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 651
Query: 486 SYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVIS 545
SYDGR+ F ENH+ DIFDSAD P+ G RWWL AEDPFQCLA CINL+EALRS SP ++IS
Sbjct: 652 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMIS 711
Query: 546 HLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDP 605
H+P+HQDGSCNGLQHYAALGRD+L A AVNLVA EKPADVY+ IA RV +IM+ D+ KDP
Sbjct: 712 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDP 771
Query: 606 STFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTA 665
+T P+A A++L+DQ+DRKLVKQTVMTSVYGVTY+GAR+QIK+RL+E+ +I DD LF+A
Sbjct: 772 ATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSA 831
Query: 666 ACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERH 725
+CYAAKVTL ALGE+F+AAR IM+WLGDCAKVIA EN+ V WTTPLGLPVVQPY K RH
Sbjct: 832 SCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRH 891
Query: 726 LV 727
L+
Sbjct: 892 LI 893
>I1PIF4_ORYGL (tr|I1PIF4) DNA-directed RNA polymerase OS=Oryza glaberrima PE=3
SV=1
Length = 993
Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/722 (62%), Positives = 550/722 (76%), Gaps = 12/722 (1%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ LRRRQI+ ETEAW APNLP VKSL LGWFEPL++ + AE
Sbjct: 153 YAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAE 212
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMA 131
Q+ R + AS A + LPA +AVI MHK+M L+M +G V+++QAA QIG A
Sbjct: 213 QELVGERGAR--ASHARFFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEA 270
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTEE-----NLNNDKEKQRKFVNGLIKRKKLKEV-H 185
+E EVRIHKFLE K +K E D EE ++ ++E+ RK V L+K++K+++V +
Sbjct: 271 IEHEVRIHKFLEKTKKKSNK--EMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRN 328
Query: 186 VVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSR 245
+V KQ+ PW + A AK+GSRLIEL+IETAY+ P +QSAD PPDIRPAF H + +R
Sbjct: 329 IVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAR 388
Query: 246 SPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIM 305
QK + YGVI+CDPLV GL++ AKH W GYDKG HLFLPSY+M
Sbjct: 389 E-QQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVM 447
Query: 306 RTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVD 365
RTHG+R+Q+D ++ EQMQ VFEAL+ LG+TK R+N R+L +V+ IW+ GG +A LVD
Sbjct: 448 RTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVD 507
Query: 366 CENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYY 425
+V LP+KP TED ++++W++ +R AKK N ERHSQRCD ELKL+VARKMKDED FYY
Sbjct: 508 RTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYY 567
Query: 426 PHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKL 485
PHNLDFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLYAGG++KL
Sbjct: 568 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 627
Query: 486 SYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVIS 545
SYDGR+ F ENH+ DIFDSAD P+ G RWWL AEDPFQCLA CINL+EALRS SP ++IS
Sbjct: 628 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMIS 687
Query: 546 HLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDP 605
H+P+HQDGSCNGLQHYAALGRD+L A AVNLVA EKPADVY+ IA RV +IM+ D+ KDP
Sbjct: 688 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDP 747
Query: 606 STFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTA 665
ST P+A A++L+DQ+DRKLVKQTVMTSVYGVTY+GAR+QIK+RL+E+ +I DD LF+A
Sbjct: 748 STDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSA 807
Query: 666 ACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERH 725
+CYAAKVTL ALGE+F+AAR IM+WLGDCAKVIA EN+ V WTTPLGLPVVQPY K RH
Sbjct: 808 SCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRH 867
Query: 726 LV 727
L+
Sbjct: 868 LI 869
>B9G2A5_ORYSJ (tr|B9G2A5) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OsJ_28503 PE=2 SV=1
Length = 983
Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/722 (62%), Positives = 550/722 (76%), Gaps = 12/722 (1%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ LRRRQI+ ETEAW APNLP VKSL LGWFEPL++ + AE
Sbjct: 143 YAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAE 202
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMA 131
Q+ R + AS A + LPA +AVI MHK+M L+M +G V+++QAA QIG A
Sbjct: 203 QELVGERGAR--ASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEA 260
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTEE-----NLNNDKEKQRKFVNGLIKRKKLKEV-H 185
+E EVRIHKFLE K +K E D EE ++ ++E+ RK V L+K++K+++V +
Sbjct: 261 IEHEVRIHKFLEKTKKKSNK--EMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRN 318
Query: 186 VVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSR 245
+V KQ+ PW + A AK+GSRLIEL+IETAY+ P +QSAD PPDIRPAF H + +R
Sbjct: 319 IVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAR 378
Query: 246 SPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIM 305
QK + YGVI+CDPLV GL++ AKH W GYDKG HLFLPSY+M
Sbjct: 379 E-QQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVM 437
Query: 306 RTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVD 365
RTHG+R+Q+D ++ EQMQ VFEAL+ LG+TK R+N R+L +V+ IW+ GG +A LVD
Sbjct: 438 RTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVD 497
Query: 366 CENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYY 425
+V LP+KP TED ++++W++ +R AKK N ERHSQRCD ELKL+VARKMKDED FYY
Sbjct: 498 RTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYY 557
Query: 426 PHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKL 485
PHNLDFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLYAGG++KL
Sbjct: 558 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 617
Query: 486 SYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVIS 545
SYDGR+ F ENH+ DIFDSAD P+ G RWWL AEDPFQCLA CINL+EALRS SP ++IS
Sbjct: 618 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMIS 677
Query: 546 HLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDP 605
H+P+HQDGSCNGLQHYAALGRD+L A AVNLVA EKPADVY+ IA RV +IM+ D+ KDP
Sbjct: 678 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDP 737
Query: 606 STFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTA 665
+T P+A A++L+DQ+DRKLVKQTVMTSVYGVTY+GAR+QIK+RL+E+ +I DD LF+A
Sbjct: 738 ATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSA 797
Query: 666 ACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERH 725
+CYAAKVTL ALGE+F+AAR IM+WLGDCAKVIA EN+ V WTTPLGLPVVQPY K RH
Sbjct: 798 SCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRH 857
Query: 726 LV 727
L+
Sbjct: 858 LI 859
>Q84LK6_ORYSJ (tr|Q84LK6) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=rpoT1 PE=2 SV=1
Length = 1017
Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/722 (62%), Positives = 550/722 (76%), Gaps = 12/722 (1%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ LRRRQI+ ETEAW APNLP VKSL LGWFEPL++ + AE
Sbjct: 177 YAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAE 236
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMA 131
Q+ R + AS A + LPA +AVI MHK+M L+M +G V+++QAA QIG A
Sbjct: 237 QELVGERGAR--ASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEA 294
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTEE-----NLNNDKEKQRKFVNGLIKRKKLKEV-H 185
+E EVRIHKFLE K +K E D EE ++ ++E+ RK V L+K++K+++V +
Sbjct: 295 IEHEVRIHKFLEKTKKKSNK--EMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRN 352
Query: 186 VVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSR 245
+V KQ+ PW + A AK+GSRLIEL+IETAY+ P +QSAD PPDIRPAF H + +R
Sbjct: 353 IVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAR 412
Query: 246 SPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIM 305
QK + YGVI+CDPLV GL++ AKH W GYDKG HLFLPSY+M
Sbjct: 413 E-QQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVM 471
Query: 306 RTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVD 365
RTHG+R+Q+D ++ EQMQ VFEAL+ LG+TK R+N R+L +V+ IW+ GG +A LVD
Sbjct: 472 RTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVD 531
Query: 366 CENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYY 425
+V LP+KP TED ++++W++ +R AKK N ERHSQRCD ELKL+VARKMKDED FYY
Sbjct: 532 RTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYY 591
Query: 426 PHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKL 485
PHNLDFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLYAGG++KL
Sbjct: 592 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 651
Query: 486 SYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVIS 545
SYDGR+ F ENH+ DIFDSAD P+ G RWWL AEDPFQCLA CINL+EALRS SP ++IS
Sbjct: 652 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMIS 711
Query: 546 HLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDP 605
H+P+HQDGSCNGLQHYAALGRD+L A AVNLVA EKPADVY+ IA RV +IM+ D+ KDP
Sbjct: 712 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDP 771
Query: 606 STFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTA 665
+T P+A A++L+DQ+DRKLVKQTVMTSVYGVTY+GAR+QIK+RL+E+ +I DD LF+A
Sbjct: 772 ATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSA 831
Query: 666 ACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERH 725
+CYAAKVTL ALGE+F+AAR IM+WLGDCAKVIA EN+ V WTTPLGLPVVQPY K RH
Sbjct: 832 SCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRH 891
Query: 726 LV 727
L+
Sbjct: 892 LI 893
>F6HGF2_VITVI (tr|F6HGF2) DNA-directed RNA polymerase OS=Vitis vinifera
GN=VIT_01s0010g00690 PE=3 SV=1
Length = 978
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/717 (62%), Positives = 538/717 (75%), Gaps = 6/717 (0%)
Query: 14 DALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQ 73
+ LRRRQI+ ETEAW APNLP +KSL LGWFEPL++ + AEQ
Sbjct: 141 NVLRRRQIKMETEAWEEAAKEYRELLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQ 200
Query: 74 KAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMAL 132
+ K +A+ AP D LPA +AVI MHK+M L+M E G ++VQAA IG A+
Sbjct: 201 DL--CKQGKNRAAYAPYFDHLPADMMAVITMHKLMGLLMTGEGNGSARVVQAACHIGEAI 258
Query: 133 EQEVRIHKFLEGNKSLQSKKTEADTEEN-LNNDKEKQRKFVNGLIKRKKLKEV-HVVLKQ 190
E EVRI +F+E K + D N + ++EK RK V+ L+K++KL++V +V +Q
Sbjct: 259 EHEVRIQRFMEKTKKKSASSNNPDGGSNPVTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQ 318
Query: 191 EEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQK 250
++ PW + A K+GSRLIELLIETAY+ P +Q D PPDIRPAF H K + QK
Sbjct: 319 DDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKET-QK 377
Query: 251 ILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGS 310
+ YGVI+CDPLV GLEK A+H W GYDKG +LFLPSY+MR HG+
Sbjct: 378 GTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGA 437
Query: 311 RKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVP 370
R+Q++ +K + ++ FEAL+ LGNTK RIN R+L V++ IWA GG +A LVD E+VP
Sbjct: 438 RQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVP 497
Query: 371 LPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLD 430
LP++P TED +I++WK++VR KK N ERHSQRCD ELKL+VARKMKDED F+YPHNLD
Sbjct: 498 LPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLD 557
Query: 431 FRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGR 490
FRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLAN+YAGG++KLSY+GR
Sbjct: 558 FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGR 617
Query: 491 LGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIH 550
+ F ENH+ DIFDSAD P+ G RWWL AEDPFQCLA CINLSEALRSSSP + ISH+P+H
Sbjct: 618 VAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVH 677
Query: 551 QDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPN 610
QDGSCNGLQHYAALGRD+L AAAVNLVA EKPADVYS IA RV DIM+RD+ KDP+T PN
Sbjct: 678 QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPN 737
Query: 611 ALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAA 670
AL A++LI Q+DRKLVKQTVMTSVYGVTYIGARDQIK+RL+E+ I D+ +F+A+CYAA
Sbjct: 738 ALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAA 797
Query: 671 KVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
K TL ALGE+FEAAR IMSWLGDCAKVIA EN V W TPLGLPVVQPY K RHL+
Sbjct: 798 KTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLGLPVVQPYRKLGRHLI 854
>M0SIH8_MUSAM (tr|M0SIH8) DNA-directed RNA polymerase OS=Musa acuminata subsp.
malaccensis PE=3 SV=1
Length = 963
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/727 (61%), Positives = 545/727 (74%), Gaps = 9/727 (1%)
Query: 5 QEVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEP 64
Q + +AE + LRRRQI+ ETEAW APNLP +KSL LGWFEP
Sbjct: 118 QRLLDAEKYTMLRRRQIQIETEAWETAAKEYKELLMDMCERKLAPNLPYMKSLFLGWFEP 177
Query: 65 LKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMEN-EEGCVQLVQ 123
++ + AEQ A++K S LPA VAVI MHK++SL+M E G V++VQ
Sbjct: 178 FRDKIVAEQGQSMAKNK---FSYQHYFSQLPAEMVAVITMHKLVSLLMTGGESGGVRVVQ 234
Query: 124 AAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQ--RKFVNGLIKRKKL 181
A Q+G A+EQE RIH+FLE + SK +D E KE+Q RK V L+K++K+
Sbjct: 235 AVCQVGEAIEQEARIHRFLEKTRKKTSKDQTSDEVEGGAVTKEEQILRKKVTDLMKKQKV 294
Query: 182 KEVHVVLKQEEVS-PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGF 240
++V +++ ++VS PW + AQ K+GSRLIEL +ETA++ PV+QSAD PPDIRPAFR
Sbjct: 295 QQVRKIVRGQDVSKPWGQDAQVKVGSRLIELFMETAFIQPPVSQSADGPPDIRPAFRRVI 354
Query: 241 KPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFL 300
+ S Q K YG+I+CDPLV GL++ A+H WKGYD+G HL L
Sbjct: 355 RIVSSE--QLKTKRYGIIECDPLVRQGLDRTARHMVIPYMPMLMPPLNWKGYDRGAHLIL 412
Query: 301 PSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNV 360
PSYIMR HG+R+Q++ +K +QMQ VF+ALD LG TK R+N R+L +V+ IW+ GG +
Sbjct: 413 PSYIMRIHGARQQREALKRAPKKQMQAVFQALDTLGCTKWRVNKRVLSIVDRIWSSGGRL 472
Query: 361 AGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDE 420
A LVD E++PLP+KP TED ++++WK+++R KK N ERHS+RCD ELKL+VARKMKDE
Sbjct: 473 ADLVDREDIPLPEKPDTEDESELRKWKWKMRSVKKENSERHSRRCDVELKLAVARKMKDE 532
Query: 421 DCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAG 480
+ FYYPHNLDFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPL KSGLRWLKIHLANLYAG
Sbjct: 533 EGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLMKSGLRWLKIHLANLYAG 592
Query: 481 GIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSP 540
G++KLSYDGRL F ENH+ DIFDSAD P+ G RWWL AEDPFQCLA CINL+EALRSSSP
Sbjct: 593 GVDKLSYDGRLAFTENHVEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSP 652
Query: 541 NSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRD 600
+ ISH+P+HQDGSCNGLQHYAALGRD+L A AVNLVA +KPADVYS IA RV DIMRRD
Sbjct: 653 ETTISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGDKPADVYSGIAARVLDIMRRD 712
Query: 601 SNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDR 660
S KDP+ PNALLA++++DQ+DRKLVKQTVMTSVYGVT+IGAR+QIKKRL+E+G+ DDR
Sbjct: 713 SQKDPAEDPNALLARLIVDQVDRKLVKQTVMTSVYGVTFIGAREQIKKRLKERGVTADDR 772
Query: 661 LLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYC 720
LF A+ YAA+ TL AL E+FEAAR IM+WLGDCAKVIA EN +V WTTPLGLPVVQPY
Sbjct: 773 ELFGASSYAARTTLTALEEMFEAARKIMNWLGDCAKVIATENHSVRWTTPLGLPVVQPYR 832
Query: 721 KTERHLV 727
+H+V
Sbjct: 833 ALGKHIV 839
>J3MVS3_ORYBR (tr|J3MVS3) DNA-directed RNA polymerase OS=Oryza brachyantha
GN=OB09G11010 PE=3 SV=1
Length = 963
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/722 (61%), Positives = 549/722 (76%), Gaps = 12/722 (1%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ LRRRQ++ ETEAW APNLP VKSL LGWFEPL++ + AE
Sbjct: 123 YAMLRRRQVQIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAE 182
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMA 131
Q R + +AS A + LPA +AVI MHK+M L+M +G V+++QAA QIG A
Sbjct: 183 QDLVCER--RARASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEA 240
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTEE-----NLNNDKEKQRKFVNGLIKRKKLKEV-H 185
+E EVR+HKFLE K +SK E D EE ++ ++E+ RK V L+K+ KL++V +
Sbjct: 241 IEHEVRLHKFLEKPKKKRSK--EMDNEEEVGCSDIAKEQERLRKKVTDLMKKHKLRQVRY 298
Query: 186 VVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSR 245
+V KQ+ PW + AK+GSRLIEL+IETAY+ P +QSAD PPDIRPAF H + ++
Sbjct: 299 IVKKQDNSKPWGQDVHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAK 358
Query: 246 SPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIM 305
QK + YGVI+CDPLV GL++ AKH W GYDKG HLFLPSY+M
Sbjct: 359 E-QQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVM 417
Query: 306 RTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVD 365
RTHG+R+Q++ +K EQMQ VFEALD LG+TK R+N R+L +V+ IW+ GG +A LVD
Sbjct: 418 RTHGARQQREAVKRAPREQMQSVFEALDTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVD 477
Query: 366 CENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYY 425
+V LP+KP TED ++++W++ ++ AKK N ERHSQRCD ELKL+VARKMKDE+ FYY
Sbjct: 478 RSDVALPEKPDTEDEAKLKKWRWNLKAAKKENSERHSQRCDVELKLAVARKMKDEEGFYY 537
Query: 426 PHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKL 485
PHNLDFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLYAGG++KL
Sbjct: 538 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 597
Query: 486 SYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVIS 545
SYDGR+ F ENH+ DIFDSAD P+ G RWWL AEDPFQCLA CINL+EALRS SP ++IS
Sbjct: 598 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMIS 657
Query: 546 HLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDP 605
H+P+HQDGSCNGLQHYAALGRD+L A AVNLVA EKPADVY+ IA RV +IMR D+ KDP
Sbjct: 658 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRNDALKDP 717
Query: 606 STFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTA 665
+T P+A A++L+DQ+DRKLVKQTVMTSVYGVTY+GAR+QIK+RL+E+ +I DD LF+A
Sbjct: 718 ATDPDAARARMLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMIGDDSELFSA 777
Query: 666 ACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERH 725
+CYAAKVTL ALGE+F+AAR IM+WLGDCAK+IA EN+ V WTTPLGLPVVQPY K RH
Sbjct: 778 SCYAAKVTLTALGEMFQAARSIMNWLGDCAKIIACENEPVKWTTPLGLPVVQPYRKLGRH 837
Query: 726 LV 727
L+
Sbjct: 838 LI 839
>D7SML3_VITVI (tr|D7SML3) DNA-directed RNA polymerase OS=Vitis vinifera
GN=VIT_14s0083g00790 PE=2 SV=1
Length = 1035
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/718 (63%), Positives = 545/718 (75%), Gaps = 9/718 (1%)
Query: 16 LRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKA 75
LRRRQ++ ETEAW APNLP +KSL LGWFEPL++A+ EQ+
Sbjct: 197 LRRRQVKIETEAWELAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQEL 256
Query: 76 HQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMEN-EEGCVQLVQAAVQIGMALEQ 134
R K +A+ AP D LPA ++VI MHK++ L+M E G ++VQAA IG A+EQ
Sbjct: 257 --CRLGKNKAAYAPYFDQLPADMMSVITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQ 314
Query: 135 EVRIHKFLEGNKSLQ---SKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQE 191
EVRIH FLE K + K E + + +++EK RK V L+K++KL ++K
Sbjct: 315 EVRIHNFLEKTKRKKVGKDKNVEGGGFDPVIHEQEKLRKKVTNLMKKQKLHAARQIVKGH 374
Query: 192 EVS-PWSRAAQAKLGSRLIELLIETAYVHSPV-NQSADTPPDIRPAFRHGFKPQSRSPGQ 249
+ S PW A+AK+GSRLIELL++TAY+ PV NQ ADTPPDIRPAF H FK R +
Sbjct: 375 DNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPPDIRPAFVHTFKTVMRE-AK 433
Query: 250 KILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHG 309
KI + +GVI+CDPLV GLE+ A+H KW GYDKG HLFLPSY+MRTHG
Sbjct: 434 KIGRRFGVIECDPLVKKGLERTARHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHG 493
Query: 310 SRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENV 369
+R+Q++ +K Q++ VFEAL+ LGNTK RIN RL DVV+ IWAGGG +A LVD +V
Sbjct: 494 ARQQREAVKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDV 553
Query: 370 PLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNL 429
PLP+KP TED Q+++WK++V+ KK N ERHSQRCD ELKL+VARKMKDED F+YPHNL
Sbjct: 554 PLPEKPDTEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNL 613
Query: 430 DFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDG 489
DFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLG SGL WLKIHLANL+AGG++KLS++G
Sbjct: 614 DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEG 673
Query: 490 RLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPI 549
R+ F ENH+ DIFDSAD P+ G RWWL AEDPFQ LAACINLSEALRSSSP + ISH+P+
Sbjct: 674 RITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTISHIPV 733
Query: 550 HQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFP 609
HQDGSCNGLQHYAALGRD+L A AVNLVA EKPADVYS IA RV DIM+RD+ KDP+ FP
Sbjct: 734 HQDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFP 793
Query: 610 NALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYA 669
+AL A++LI+Q+DRKLVKQTVMTSVYGVTYIGARDQIK+RL+E+ I DD LF AACYA
Sbjct: 794 DALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAACYA 853
Query: 670 AKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
AK+TL ALGE+F+AAR IMSWLGDCAK+IA ENQ V WTTPLGLPVVQPY K RHL+
Sbjct: 854 AKITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLI 911
>K3ZQE4_SETIT (tr|K3ZQE4) DNA-directed RNA polymerase OS=Setaria italica
GN=Si028824m.g PE=3 SV=1
Length = 972
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/730 (60%), Positives = 548/730 (75%), Gaps = 8/730 (1%)
Query: 3 AEQEVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWF 62
AE+ + +LRRRQI ETEAW APNLP +KSL LGWF
Sbjct: 122 AEEHGMTYHKYASLRRRQIRVETEAWEQAAKEYRELLTDMCEQKLAPNLPYIKSLFLGWF 181
Query: 63 EPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQL 121
EPL++ + AEQ+ R + AS P + LPA +AVI MHK+M L+M +G V++
Sbjct: 182 EPLRDQIAAEQELVANRGSR--ASHGPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRV 239
Query: 122 VQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADT---EENLNNDKEKQRKFVNGLIKR 178
+QAA QIG A+E EVRIH+FLE + +K+ E + + ++ ++++ RK V L+K+
Sbjct: 240 IQAACQIGEAIEHEVRIHRFLEKTRKKSNKEKENEEEIFDSDIAKEQQRLRKKVTDLMKK 299
Query: 179 KKLKEVHVVLK-QEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFR 237
+KL++V ++K Q++ PW + A AK+GSRLIEL IETA++ P +QS+D PDIRPAFR
Sbjct: 300 QKLRQVRKIVKNQDDSRPWGQDAHAKVGSRLIELFIETAHIQPPASQSSDGLPDIRPAFR 359
Query: 238 HGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGH 297
H + + QK + YGVI+CDPLV GL++ AKH W GYDKG H
Sbjct: 360 HEMRTVPKE-QQKHSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAH 418
Query: 298 LFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGG 357
LFLPSY+MRTHG+R+Q++ +K EQMQ VFEAL+ LG+TK R+N R+L +++ IW+ G
Sbjct: 419 LFLPSYVMRTHGARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSIIDRIWSSG 478
Query: 358 GNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKM 417
G +A LVD +VPLP+KP TED +++W++ R KK N ERHSQRCD ELKL+VARKM
Sbjct: 479 GRLADLVDRTDVPLPEKPDTEDETVLKKWRWHTRSVKKGNSERHSQRCDVELKLAVARKM 538
Query: 418 KDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANL 477
KDE+ FYYPHNLDFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLG+SGLRWLKIHLANL
Sbjct: 539 KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGESGLRWLKIHLANL 598
Query: 478 YAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRS 537
YAGG++KLSY GR+ F ENH+ +IFDSAD P+ G RWWL AEDPFQCLA C+NL+EALRS
Sbjct: 599 YAGGVDKLSYAGRIAFAENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRS 658
Query: 538 SSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIM 597
SP + ISH+P+HQDGSCNGLQHYAALGRD+L A AVNLVA EKPADVYS IA RV +IM
Sbjct: 659 PSPEATISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYSGIATRVVEIM 718
Query: 598 RRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLIT 657
RRDS KDPST P+A A++++DQ+DRKLVKQTVMTSVYGVTY+GAR+QIK+RL+E+G+I
Sbjct: 719 RRDSQKDPSTDPDAARARLILDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIA 778
Query: 658 DDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQ 717
DD LF A+CYAAKVTL ALGE+F+AAR IM+WLGDCAKVIA EN+ V WTTPLGLPVVQ
Sbjct: 779 DDAELFGASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVKWTTPLGLPVVQ 838
Query: 718 PYCKTERHLV 727
PY K RHL+
Sbjct: 839 PYRKLGRHLI 848
>B9HIV5_POPTR (tr|B9HIV5) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_765989 PE=3 SV=1
Length = 877
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/727 (60%), Positives = 545/727 (74%), Gaps = 16/727 (2%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ L+RRQI+ ETEAW APNLP VKSL LGWFEPL++A+ AE
Sbjct: 31 YAILKRRQIKMETEAWEQAAQEYQEMLEDMCEQKLAPNLPYVKSLFLGWFEPLRDAIVAE 90
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQIGM 130
Q+ + + + S + LPA +AVI MHK+M L+M G +++VQAA +G
Sbjct: 91 QELCK---RNLRVSHRAHFSDLPADMMAVITMHKLMGLLMTGNGGSASIRVVQAASVVGE 147
Query: 131 ALEQEVRIHKFLEGNK---SLQSKKTEADTE------ENLNNDKEKQRKFVNGLIKRKKL 181
A+E E RIHKFLE K ++++K +E +++ E L+ ++EK RK V LIK++K+
Sbjct: 148 AIEHEGRIHKFLEKTKKRKNVEAKISEGESDAAIEEGEKLSKEQEKLRKKVTTLIKKQKV 207
Query: 182 KEVHVVLK-QEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGF 240
++V ++K ++ PW + K+GSRLI+L+IETAY+ P++Q D PPDIRPAF H
Sbjct: 208 QQVRRIVKGHDDSRPWGQEEHVKVGSRLIQLMIETAYIQPPIDQIGDGPPDIRPAFVHTL 267
Query: 241 KPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFL 300
K ++ QK + YGVI+CDPLV GLEK A+H W GYD+G HLFL
Sbjct: 268 KTITKD-TQKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTGYDQGAHLFL 326
Query: 301 PSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNV 360
PSY+MR HGS++Q+D +K Q++ VF+ALD LGNTK RIN R+L VV+ IWA GG++
Sbjct: 327 PSYVMRIHGSKQQRDAVKRASRNQLEPVFKALDTLGNTKWRINKRVLVVVDRIWASGGHL 386
Query: 361 AGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDE 420
AGLVD E+ PLP++P TED +I++W ++VR KK N ERHSQRCD ELKL+VARKMKDE
Sbjct: 387 AGLVDREDAPLPEEPQTEDEAEIRKWTWKVRSVKKENSERHSQRCDIELKLAVARKMKDE 446
Query: 421 DCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAG 480
+ FYYPHNLDFRGRAYPMHP+LNHLGSD+CRG+LEFAEGRPLGKSGLRWLKIHLANLYAG
Sbjct: 447 EGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 506
Query: 481 GIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSP 540
G++KLSYDGR+ F ENH+ DIFDSAD P+ G RWWL AEDPFQCLAACINLSEALRS SP
Sbjct: 507 GVDKLSYDGRISFTENHLDDIFDSADQPLEGRRWWLGAEDPFQCLAACINLSEALRSPSP 566
Query: 541 NSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRD 600
+ SH P+HQDGSCNGLQHYAALGRD+L AAAVNLV EKPADVYS IA RV DIM+RD
Sbjct: 567 ETATSHTPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGEKPADVYSGIATRVLDIMQRD 626
Query: 601 SNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDR 660
+ KDP+ PN++ AK+L++Q+DRKLVKQTVMTSVYGVTYIGARDQIK+RL+E+ +I DD
Sbjct: 627 AEKDPAINPNSVHAKLLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCIIADDP 686
Query: 661 LLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYC 720
L++AACYAAK TL AL E+FE ARGIM+WLG+CAKVIA ENQ V WTTPLGLPVVQPY
Sbjct: 687 QLYSAACYAAKTTLMALEEMFEGARGIMAWLGECAKVIASENQPVRWTTPLGLPVVQPYR 746
Query: 721 KTERHLV 727
+ RHL+
Sbjct: 747 QLGRHLI 753
>M5WQP7_PRUPE (tr|M5WQP7) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa000719mg PE=4 SV=1
Length = 1024
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/718 (61%), Positives = 542/718 (75%), Gaps = 6/718 (0%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ L+RRQI+ ETEAW APNLP +KSL LGWFEPL+ A++ E
Sbjct: 186 YHMLKRRQIKIETEAWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDKE 245
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMEN-EEGCVQLVQAAVQIGMA 131
Q R K + + AP +D LPA ++VI MHK+M L+M E G ++V AA IG A
Sbjct: 246 QDL--CRKGKNKTAYAPYIDQLPADMMSVITMHKLMGLLMTGGEHGTCRVVAAACTIGEA 303
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTEENL-NNDKEKQRKFVNGLIKRKKLKEVH-VVLK 189
+EQEVRIHKFLE + + K + + E + ++EK K V L+K++KLK V +V K
Sbjct: 304 IEQEVRIHKFLEMTRKKKVDKDQENGESDAAKKEREKLNKKVTNLMKKQKLKAVRGIVSK 363
Query: 190 QEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQ 249
+ WS A+AK+GSRLIELL +TA++ P +Q AD PPDIRPAF H F+ ++ +
Sbjct: 364 HDASKSWSLEARAKVGSRLIELLTQTAFIQPPADQLADGPPDIRPAFVHTFRTVAKD-AK 422
Query: 250 KILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHG 309
+ YGVI+CDPLVL GLEK A+H W GYDKGG+ FLPSY+MR HG
Sbjct: 423 NASRRYGVIECDPLVLKGLEKTARHMVIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHG 482
Query: 310 SRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENV 369
+R+Q++ +K EQ++ VF+ALD LGNT+ R+N R+L VV+ IWA GG++A LVD +V
Sbjct: 483 ARQQREAIKRTPREQLEPVFKALDALGNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDV 542
Query: 370 PLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNL 429
PLP++P TED +++WK++V+ KK N+ERHSQRCDTELKL+VARKMKDE+ FYYPHNL
Sbjct: 543 PLPEEPDTEDETLLKKWKWKVKSVKKENMERHSQRCDTELKLAVARKMKDEEGFYYPHNL 602
Query: 430 DFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDG 489
DFRGRAYPMHP+LNHLGSD+CRG+LEF EGRPLGKSGL WLKIHLANLYAGG++KLS +G
Sbjct: 603 DFRGRAYPMHPYLNHLGSDVCRGILEFQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEG 662
Query: 490 RLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPI 549
R+ F ENH+ DIFDS D P+ G RWWL+AEDPFQCLA CINL+EALRSSSP + ISH+P+
Sbjct: 663 RIAFTENHLDDIFDSVDKPLEGRRWWLKAEDPFQCLAVCINLAEALRSSSPETFISHIPV 722
Query: 550 HQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFP 609
HQDGSCNGLQHYAALGRD+L AA+VNLV EKPADVYS IAVRV +IMRRD+ KDP FP
Sbjct: 723 HQDGSCNGLQHYAALGRDKLGAASVNLVTGEKPADVYSGIAVRVLEIMRRDAQKDPVVFP 782
Query: 610 NALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYA 669
AL AK+LI+Q+DRKLVKQTVMTSVYGVTYIGARDQIK+RL+E+G I+DD +F ACYA
Sbjct: 783 EALRAKLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGSISDDAEIFGCACYA 842
Query: 670 AKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
AK+TL ALGE+FEAARGIMSWLG+CAK+IA ENQ V WTTPLGLPVVQPY K RHL+
Sbjct: 843 AKITLTALGEMFEAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHLI 900
>I1IIY6_BRADI (tr|I1IIY6) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI4G08880 PE=3 SV=1
Length = 959
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/720 (60%), Positives = 547/720 (75%), Gaps = 8/720 (1%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ ALR+RQ+ ETEAW APNLP VKSL LGWFEPL++ + AE
Sbjct: 119 YAALRQRQVRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAE 178
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMA 131
Q+ R + AS AP + LPA +AVI MHK+M L+M +G V+++QAA QIG A
Sbjct: 179 QELVGERGAR--ASHAPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEA 236
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTE---ENLNNDKEKQRKFVNGLIKRKKLKEV-HVV 187
+E EVRIHKFLE K +K+ + E ++ ++++ RK V L+K++K+++V ++V
Sbjct: 237 IEHEVRIHKFLEKTKKKNTKEVDNVVEAGDSDIAKEQQRLRKKVTDLMKKQKIRQVRNIV 296
Query: 188 LKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSP 247
KQ+ PW + A AK+GSRLIELLIETA++ PV+QSAD+ PDIRPAF H + +R
Sbjct: 297 KKQDSTRPWGQDAHAKVGSRLIELLIETAHIQPPVSQSADSTPDIRPAFTHEMRTVTRE- 355
Query: 248 GQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT 307
QK + YGVI+CDPL+ GL++ AKH W GYDKG HLFLPSY+MRT
Sbjct: 356 QQKSSRRYGVIKCDPLIRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRT 415
Query: 308 HGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE 367
HG+R+Q++ +K EQMQ +FEALD LG+TK RIN ++L +V+ IW+ GG +A LVD
Sbjct: 416 HGARQQREAVKKAPKEQMQLIFEALDTLGSTKWRINKKVLSIVDRIWSSGGRLADLVDRT 475
Query: 368 NVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPH 427
+V LP+KP TED ++++W++ +R KK N ERHSQRCD ELKL+VARKMKDE FYYPH
Sbjct: 476 DVALPEKPDTEDETELKKWRWNLRSVKKENSERHSQRCDVELKLAVARKMKDEVGFYYPH 535
Query: 428 NLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSY 487
NLDFRGRAYPMHP+LNHLGSDLCRG+LEF+EGRPLG SGL WLKIHLANLYAGG++KLSY
Sbjct: 536 NLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGDSGLCWLKIHLANLYAGGVDKLSY 595
Query: 488 DGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHL 547
DGR+ F ENH+ DIFDSA+ P+ G RWWL AEDPFQCLA C++L+EALRSSSP ++ISH+
Sbjct: 596 DGRIAFTENHLEDIFDSANRPLEGKRWWLGAEDPFQCLAVCMDLTEALRSSSPEAMISHI 655
Query: 548 PIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPST 607
P+HQDGSCNGLQHYAALGRD+L A AVNLV+ EKPADVYS IA RV +IMRRD+ KDP+
Sbjct: 656 PVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGEKPADVYSGIATRVVEIMRRDAQKDPAL 715
Query: 608 FPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAAC 667
P+A A++L+DQ+DRKLVKQTVMTSVYGVTY+GAR+QIK+RL+E+G+I DD LF A+C
Sbjct: 716 DPDAARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIGDDSELFAASC 775
Query: 668 YAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
YAAKVTL ALGE+FEAAR IM+WLGDCAKVIA EN+ V W TPLGLPVVQPY K RHL+
Sbjct: 776 YAAKVTLTALGEMFEAARSIMNWLGDCAKVIACENEPVRWMTPLGLPVVQPYRKLGRHLI 835
>C5X2G2_SORBI (tr|C5X2G2) DNA-directed RNA polymerase OS=Sorghum bicolor
GN=Sb02g039520 PE=3 SV=1
Length = 976
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/721 (60%), Positives = 543/721 (75%), Gaps = 9/721 (1%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ +LRRRQI ETEAW APNLP +KSL LGWFEPL++ + E
Sbjct: 135 YTSLRRRQIRVETEAWEQAAKEYRELLADMCEQKLAPNLPYIKSLFLGWFEPLRDQIVTE 194
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMA 131
Q+ +AS P + LPA +AVI MHK+M L+M +G V+++QAA QIG A
Sbjct: 195 QEL--VADPGSRASHGPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEA 252
Query: 132 LEQEVRIHKFLEGNKSLQSKKTE----ADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVV 187
+E EVRI++FLE + +K+ E A + ++ ++++ RK V L+K++KL++V +
Sbjct: 253 IEHEVRINRFLEKTRKKSNKEMEKEEEAAGDTDIAKEQQRLRKKVTDLMKKQKLRQVRNI 312
Query: 188 LKQEEVS-PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRS 246
+K ++ S PW + QAK+GSRLIEL ++TA++ P +QS+D PDIRPAFRH + ++
Sbjct: 313 VKNQDNSRPWGQDVQAKVGSRLIELFMDTAHIQPPASQSSDGLPDIRPAFRHEMRTVAKE 372
Query: 247 PGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMR 306
QK + YGVI+CDPLV GL++ AKH W GYDKG HLFLPSY+MR
Sbjct: 373 -QQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMR 431
Query: 307 THGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC 366
THG+R+Q++ +K EQMQ VFEAL+ LG+TK R+N R+L +V+ IW+ GG +A LVD
Sbjct: 432 THGARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDR 491
Query: 367 ENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYP 426
+VPLP+KP TED I+ WK+ +R KK N ERHSQRCD ELKL+VARKMKDE+ FYYP
Sbjct: 492 TDVPLPEKPDTEDETLIKNWKWHLRSVKKENSERHSQRCDVELKLAVARKMKDEEGFYYP 551
Query: 427 HNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLS 486
HNLDFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGL WLKIHLANLYAGG++KLS
Sbjct: 552 HNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLS 611
Query: 487 YDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISH 546
YDGR+ F ENH+ +IFDSAD P+ G RWWL AEDPFQCLA C+NL+EALRSSSP + ISH
Sbjct: 612 YDGRVAFTENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSSSPETTISH 671
Query: 547 LPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPS 606
+P+HQDGSCNGLQHYAALGRD+L A AVNLVA EKPADVY+ IA RV +IMR D+ KDPS
Sbjct: 672 IPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRMDAQKDPS 731
Query: 607 TFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAA 666
P+ A++++DQ+DRKLVKQTVMTSVYGVTY+GARDQIK+RL+E+G+I D+ LF A+
Sbjct: 732 IDPDVARARLIVDQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGVIPDEAELFGAS 791
Query: 667 CYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHL 726
CYAAKVTL ALGE+F+AARGIM+WLGDCAKVIA EN+ V WTTPLGLPVVQPY K RHL
Sbjct: 792 CYAAKVTLTALGEMFQAARGIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHL 851
Query: 727 V 727
+
Sbjct: 852 I 852
>E1V2K3_NUPAD (tr|E1V2K3) DNA-directed RNA polymerase OS=Nuphar advena GN=rpoTm1
PE=3 SV=1
Length = 996
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/721 (61%), Positives = 546/721 (75%), Gaps = 15/721 (2%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ A +RRQI+ ETEAW APNLP +KSL LGWFEPL++ + AE
Sbjct: 161 YKAQKRRQIKIETEAWEQAAREYRELFVDMCKQKLAPNLPYMKSLFLGWFEPLRDRIAAE 220
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVM-ENEEGCVQLVQAAVQIGMA 131
Q+++ R K +A+ A +D LPA VAVI MHK+M L+M N+ GC ++VQAA QIG A
Sbjct: 221 QESY--RKGKSRAAYARYIDHLPADMVAVITMHKLMGLMMTSNDNGCARVVQAACQIGEA 278
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTE-ENLNNDKEKQRKFVNGLIKRKKLKEVHVVLK- 189
+E E RIH+FLE K + +A+ E E + +KE RK V LIK++KL++V ++K
Sbjct: 279 IENEARIHRFLEKTKKKPANANKAEAEPEAVTKEKEFLRKKVTSLIKKQKLRQVTKIVKG 338
Query: 190 QEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPG- 248
+++ PW AK+G RLIELL++ + +P++Q+AD AFRH RSP
Sbjct: 339 KDDSEPWGTEGHAKVGCRLIELLMKP-LISAPLDQTADGHL-YSSAFRHSL----RSPSN 392
Query: 249 --QKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMR 306
Q + YGVI+CDPLV GL++ A+H W GYDKG HLFLPSY+MR
Sbjct: 393 HQQNNSRRYGVIECDPLVRKGLDRTARHMVIPYMPMLVPPLGWTGYDKGAHLFLPSYVMR 452
Query: 307 THGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC 366
THG+R+Q++ +K+ +Q+Q VFEALD LG+TK R+N R+L VV+ IWA GG++AGLVDC
Sbjct: 453 THGARQQREAVKSAPRKQLQSVFEALDTLGSTKWRVNKRVLAVVDRIWASGGHLAGLVDC 512
Query: 367 ENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYP 426
++VPLP+KP TED +++WK+ +R A+K N ER+SQRCD ELKL+VARKMKDE+ FYYP
Sbjct: 513 QDVPLPEKPDTEDEAVLRKWKWSLRNARKENSERYSQRCDVELKLAVARKMKDEEGFYYP 572
Query: 427 HNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLS 486
HNLDFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGL WLKIH+ANLYAGGI+KLS
Sbjct: 573 HNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHVANLYAGGIDKLS 632
Query: 487 YDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISH 546
YDGRL FVENH+ DIFDS+D P+ G+RWWL AEDPFQCLAACINLS+ALRSSSP + ISH
Sbjct: 633 YDGRLAFVENHLDDIFDSSDRPLEGSRWWLGAEDPFQCLAACINLSDALRSSSPETTISH 692
Query: 547 LPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPS 606
+PIHQDGSCNGLQHYAALGRD+L AAAVNLVA EKPADVYS IA RV DIMRRDS KDP+
Sbjct: 693 VPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAERVFDIMRRDSQKDPT 752
Query: 607 TFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAA 666
P+A A++LIDQ+DRKLVKQTVMTSVYGVTYIGARDQIK+RL+E+ I DD+ +F AA
Sbjct: 753 NNPSAARARLLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAIPDDQ-VFGAA 811
Query: 667 CYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHL 726
CYAAK TL AL E+F+AAR IMSWLGDCAKVIA EN+ V WTTPLGLPVVQPY K R L
Sbjct: 812 CYAAKTTLTALEEMFQAARAIMSWLGDCAKVIASENEPVRWTTPLGLPVVQPYKKKGRCL 871
Query: 727 V 727
V
Sbjct: 872 V 872
>Q41524_WHEAT (tr|Q41524) DNA-directed RNA polymerase OS=Triticum aestivum PE=2
SV=2
Length = 949
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/715 (59%), Positives = 543/715 (75%), Gaps = 6/715 (0%)
Query: 16 LRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKA 75
LR+RQ++AETEAW AP LP VKSL LGWFEPL++AV +Q
Sbjct: 114 LRQRQVKAETEAWARAAEEYRQLEGEMLDRHLAPQLPYVKSLFLGWFEPLRDAVARDQDV 173
Query: 76 HQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQIGMALE 133
R K+ + A + LPA KVAVIVMHKMM L+M +++GC V++VQAA IG A+E
Sbjct: 174 Q--RRKRVKHVYAKYLLLLPAEKVAVIVMHKMMGLLMSSKDGCGSVRVVQAAHSIGEAVE 231
Query: 134 QEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQE-E 192
+E ++ F + + KTE++ + L+ ++ K RK V L++R+K E +++QE E
Sbjct: 232 REYKVQAFFQKTRRKTRSKTESENDPGLDKEQAKCRKLVKSLVRRRKSTEAQKLVQQEIE 291
Query: 193 VSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKIL 252
+ W AQ KLG+RLIELL+++A+V SP +Q+ D+ PD RPAF+H + G ++
Sbjct: 292 LEEWGTEAQVKLGTRLIELLLDSAFVQSPADQTPDSSPDFRPAFKHVLRKPIVENG-RLK 350
Query: 253 KNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRK 312
K + VI+CDPLV G E A+H KWKGYDKGGHLFLPSY+MRTHG +
Sbjct: 351 KKHFVIECDPLVHEGFESTARHVEIPYLPMLVPPTKWKGYDKGGHLFLPSYVMRTHGVKD 410
Query: 313 QQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLP 372
Q++ +K+V +Q++KVFEALDILG TK R+N R+ DVVE+IW+ GG +AGLVD N+PLP
Sbjct: 411 QKEAIKSVPRKQLRKVFEALDILGGTKWRVNRRVHDVVETIWSRGGGIAGLVDKGNIPLP 470
Query: 373 DKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFR 432
++P TED +IQ+WK+ V+K KK N E H++RCDTELKLSVARKM++ED FYYPHNLDFR
Sbjct: 471 EQPETEDPDEIQKWKWSVKKTKKANRELHAERCDTELKLSVARKMREEDGFYYPHNLDFR 530
Query: 433 GRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLG 492
GRAYPMHPHL+HLGSDLCRG+LE+AEGRPLGKSGLRWLKIHLAN Y GGIEKLS++ +L
Sbjct: 531 GRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHESKLT 590
Query: 493 FVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQD 552
FVE+H+ DIFDSA NPV+GN WW+ AEDPFQCLAAC++LS AL SSSP+ +SHLPIHQD
Sbjct: 591 FVEDHLPDIFDSAANPVDGNCWWINAEDPFQCLAACMDLSNALESSSPHGAVSHLPIHQD 650
Query: 553 GSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNAL 612
GSCNGLQHYAALGRD + AAAVNLV EKPAD+YSEIA RV D++R DS KDP+T P+
Sbjct: 651 GSCNGLQHYAALGRDYMGAAAVNLVPGEKPADIYSEIAARVLDVVREDSMKDPATDPSVP 710
Query: 613 LAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKV 672
LAKVL+D++DRKLVKQTVMTSVYGVT+IGAR QI KRL+EKG ITDD+LL+ +CYA +V
Sbjct: 711 LAKVLVDEVDRKLVKQTVMTSVYGVTFIGARQQIMKRLQEKGHITDDKLLYDVSCYATRV 770
Query: 673 TLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
TL ALG++F++AR IM+WLGDCAK+IA +NQ V WT+P+GLPVVQPY K + +++
Sbjct: 771 TLDALGQMFQSARAIMAWLGDCAKMIASKNQPVRWTSPVGLPVVQPYKKYKNYMI 825
>Q70XR0_HORVD (tr|Q70XR0) DNA-directed RNA polymerase OS=Hordeum vulgare var.
distichum GN=rpoT PE=2 SV=1
Length = 948
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/715 (59%), Positives = 544/715 (76%), Gaps = 6/715 (0%)
Query: 16 LRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKA 75
LR+RQ++AETEAW AP LP VKSL LGWFEPL++AV +Q
Sbjct: 113 LRQRQVKAETEAWARAAEEYRQLEREMLDRNLAPQLPYVKSLFLGWFEPLRDAVARDQDV 172
Query: 76 HQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQIGMALE 133
R K+ + A + LP KVAVIVMHKMM L+M +++GC V++VQAA IG A+E
Sbjct: 173 Q--RRKRVKHVYAKYLLLLPPEKVAVIVMHKMMGLLMSSKDGCGSVRVVQAAHSIGEAVE 230
Query: 134 QEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQE-E 192
+E ++ F + + K E++ + L+ ++ K RK V L++R+KL E +++QE E
Sbjct: 231 REYKVQAFFQKTRRKTRSKNESENDPALDKEQAKCRKLVKSLVRRRKLTEAQKLVQQEIE 290
Query: 193 VSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKIL 252
+ W AQ KLG+RLIELL+++A+V SP NQ+ D PD RPAF+H + G ++
Sbjct: 291 LEEWGAEAQVKLGTRLIELLLDSAFVQSPANQTPDNSPDFRPAFKHVLRKPIVENG-RLK 349
Query: 253 KNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRK 312
K + VI+CDPLV G E A+H KWKGYDKGGHLFLPSY+MRTHG +
Sbjct: 350 KKHFVIECDPLVHEGFESTARHVEIPYLPMLVPPTKWKGYDKGGHLFLPSYVMRTHGVKD 409
Query: 313 QQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLP 372
Q++ +K+V +Q++KVFEALDILG TK R+N R+ DVVE+IW+ GG +AGLVD EN+PLP
Sbjct: 410 QKEAIKSVPRKQLRKVFEALDILGGTKWRVNRRVHDVVETIWSRGGGIAGLVDKENIPLP 469
Query: 373 DKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFR 432
++P TED +IQ+W++ V+K KK N E H++RCDTELKLSVARKM++ED FYYPHNLDFR
Sbjct: 470 ERPETEDPDEIQKWRWSVKKTKKTNRELHAERCDTELKLSVARKMREEDGFYYPHNLDFR 529
Query: 433 GRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLG 492
GRAYPMHPHL+HLGSDLCRG+LE+ EGRPLGKSGLRWLKIHLAN Y GGIEKL+++ +L
Sbjct: 530 GRAYPMHPHLSHLGSDLCRGVLEYGEGRPLGKSGLRWLKIHLANKYGGGIEKLTHESKLA 589
Query: 493 FVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQD 552
FVE+ + IFDSA NPV+GN WW+ AEDPFQCLAACI+LS+AL+SSSP++ +SHLPIHQD
Sbjct: 590 FVEDRLPAIFDSAANPVDGNCWWINAEDPFQCLAACIDLSDALKSSSPHAAVSHLPIHQD 649
Query: 553 GSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNAL 612
GSCNGLQHYAALGRD + AAAVNLV EKPAD+YSEIA RV +++R DS KDP+T P+
Sbjct: 650 GSCNGLQHYAALGRDYMGAAAVNLVPGEKPADIYSEIAARVLNVVREDSMKDPATDPSVP 709
Query: 613 LAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKV 672
LA+VL+DQ+DRKLVKQTVMTSVYGVT+IGAR QI KRL+EKG ITD++LL+ +CYAA+V
Sbjct: 710 LARVLVDQVDRKLVKQTVMTSVYGVTFIGARQQIMKRLQEKGHITDEKLLYDVSCYAARV 769
Query: 673 TLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
TL ALG++F++ARGIM+WLGDCAK+IA +NQ V WT+P+GLPVVQPY K + +++
Sbjct: 770 TLDALGQMFQSARGIMAWLGDCAKMIASKNQPVRWTSPVGLPVVQPYKKYKNYMI 824
>B9HWT3_POPTR (tr|B9HWT3) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_769753 PE=3 SV=1
Length = 852
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/727 (59%), Positives = 537/727 (73%), Gaps = 16/727 (2%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ L+RRQ++ ETEAW APNLP VKSL LGWFEPL++A+ AE
Sbjct: 6 YTILKRRQVKMETEAWEQTAREYQEMLEDMCEQKLAPNLPYVKSLFLGWFEPLRDAILAE 65
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQIGM 130
Q+ + S+ + + LPA +AVI MHK+M L+M G +++VQAA +G
Sbjct: 66 QELCKVNSRVPHRAY---FNDLPADMMAVITMHKLMGLLMTGNGGTASIRVVQAASVVGE 122
Query: 131 ALEQEVRIHKFLEGNK---SLQSKKTEADT------EENLNNDKEKQRKFVNGLIKRKKL 181
A+E E +IHKFLE K +L+ K +E ++ E L ++EK RK V L+K++K+
Sbjct: 123 AIENEAKIHKFLEKTKKRKNLKEKISEGESVAAIYEGEKLTKEQEKLRKKVTTLMKKQKV 182
Query: 182 KEVHVVLKQEEVS-PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGF 240
+V ++K + S PW + A K+GSRLI+L+IETAY+ P++Q D PPDIRPAF H
Sbjct: 183 HQVRRIVKGHDDSMPWGQEAHLKVGSRLIQLMIETAYIQPPIDQIGDGPPDIRPAFVHTL 242
Query: 241 KPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFL 300
K ++ QK + YGVI+CDPLV GLEK A+H W GYD+G + FL
Sbjct: 243 KTITKDT-QKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTGYDQGAYFFL 301
Query: 301 PSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNV 360
PSY+MR HG+++Q+ +K Q++ VF+ALD LGNTK R+N R+L V++ IWA GG++
Sbjct: 302 PSYVMRIHGAKQQRVAIKRASRNQLEPVFKALDTLGNTKWRVNKRILGVIDRIWASGGHL 361
Query: 361 AGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDE 420
AGLVD E+VPLP++P TED +I++W+++V+ KK N ERHSQRCD ELKL+VARKMKDE
Sbjct: 362 AGLVDREDVPLPEEPQTEDEAEIRKWRWKVKSVKKENSERHSQRCDVELKLAVARKMKDE 421
Query: 421 DCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAG 480
+ FYYPHN+DFRGRAYPMHP+LNHLGSD+CRG+LEFAEGRPLGKSGLRWLKIHLANLYAG
Sbjct: 422 EGFYYPHNVDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 481
Query: 481 GIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSP 540
G++KLSYDGR+ F ENH+ DIFDSAD P+ G RWWL AEDPFQCLA CINLSEALRS SP
Sbjct: 482 GVDKLSYDGRISFTENHLDDIFDSADRPLEGQRWWLGAEDPFQCLAVCINLSEALRSPSP 541
Query: 541 NSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRD 600
+ ISH P+HQDGSCNGLQHYAALGRD+L AAAVNLV KPADVYS IA RV DIMRRD
Sbjct: 542 ETAISHTPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGGKPADVYSGIAARVLDIMRRD 601
Query: 601 SNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDR 660
+ DP+ PN++ AK+LI+Q+DRKLVKQTVMTSVYGVTYIGARDQIK+RL+E+ I DD
Sbjct: 602 AENDPAINPNSVHAKLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCNIADDP 661
Query: 661 LLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYC 720
L++AACYAAK TL AL E+FE ARGIM+WLG+CAKVIA ENQ V WTTP GLPVVQPY
Sbjct: 662 QLYSAACYAAKTTLTALEEMFEGARGIMAWLGECAKVIASENQPVQWTTPFGLPVVQPYR 721
Query: 721 KTERHLV 727
+ R L+
Sbjct: 722 QLGRQLI 728
>D7KWX3_ARALL (tr|D7KWX3) DNA-directed RNA polymerase OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_476028 PE=3 SV=1
Length = 975
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/727 (58%), Positives = 532/727 (73%), Gaps = 12/727 (1%)
Query: 10 AETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAV 69
A+ + LR+RQ++ ETE W APNLP +K+L LGWFEP++ A+
Sbjct: 128 AQKYYMLRQRQVKMETEEWERAARECREILADMCEQKLAPNLPYMKTLFLGWFEPVRNAI 187
Query: 70 EAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQ 127
+A+ + KK + AP ++ LPA K+AVI M+KMM L+M N EG V+LV AA Q
Sbjct: 188 QADLDLFKI--KKGKIPYAPFMEQLPADKMAVITMNKMMGLLMTNVEGVGIVKLVNAATQ 245
Query: 128 IGMALEQEVRIHKFLEGNKSLQSKKTEADTE------ENLNNDKEKQRKFVNGLIKRKKL 181
IG A+EQEVRI+ FL+ N + +TE E + + EK RK L+++ KL
Sbjct: 246 IGEAVEQEVRINSFLQKNNKKNATGKTINTEAVHVSEETVAKETEKARKRATVLMEKNKL 305
Query: 182 KEVHVVL-KQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGF 240
+EV V++ K + PW + AQ K+G+RLI+LLIE AY+ P Q D PPDIRPAF+ F
Sbjct: 306 REVKVLVRKHDSFKPWGQEAQVKVGARLIQLLIENAYIQPPAEQFDDGPPDIRPAFKQNF 365
Query: 241 KPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFL 300
+ + K + YG I+CDPLVL GL+K A+H + W GYD+G HLFL
Sbjct: 366 RTVTLE-NTKTSRRYGCIECDPLVLKGLDKSARHMVIPYLPMLIPPQNWTGYDQGAHLFL 424
Query: 301 PSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNV 360
PS+IMRTHG+ +Q+ VM+ EQ++ VFEALD LGNTK RIN ++L +V+ IWA GG +
Sbjct: 425 PSFIMRTHGAIQQRTVMRRTPKEQLEPVFEALDTLGNTKWRINKKVLSLVDRIWANGGRL 484
Query: 361 AGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDE 420
GLVD E+VP+P++P ED ++ + WK+ +KA K N ERHSQRCD ELKL VARKMKDE
Sbjct: 485 GGLVDREDVPVPEEPEREDHEKFKNWKWESKKAIKQNNERHSQRCDIELKLEVARKMKDE 544
Query: 421 DCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAG 480
+ FYYPHN+DFRGRAYP+HP+LNHLGSDLCRG+LEF EG+PLGKSGLRWLKIH+ANLYAG
Sbjct: 545 EGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANLYAG 604
Query: 481 GIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSP 540
G++KL+Y+ R+ F E+H+ DI+DS+D P+ G RWWL AEDPFQCLAACINLSEALRS P
Sbjct: 605 GVDKLAYEDRIAFTESHLEDIYDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALRSPFP 664
Query: 541 NSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRD 600
+ ISH+PIHQDGSCNGLQHYAALGRD+L A AVNLV EKPADVY+EIA RV IM++D
Sbjct: 665 EAAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYAEIAARVFKIMQQD 724
Query: 601 SNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDR 660
+ +DP TFPNA AK+++DQ+DRKLVKQTVMTSVYGVTY GARDQIKKRL+E+G DD
Sbjct: 725 AKEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTFEDDS 784
Query: 661 LLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYC 720
L F AACYAAK+TL AL E+FEAAR I SW GDCAK+IA EN+AV WTTPLGLPVVQPY
Sbjct: 785 LTFHAACYAAKITLKALEEMFEAARAIKSWFGDCAKIIASENKAVCWTTPLGLPVVQPYR 844
Query: 721 KTERHLV 727
K RHLV
Sbjct: 845 KPGRHLV 851
>Q9XF15_MAIZE (tr|Q9XF15) DNA-directed RNA polymerase OS=Zea mays GN=rpoT1 PE=2
SV=1
Length = 975
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/720 (60%), Positives = 540/720 (75%), Gaps = 8/720 (1%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ +LRRRQI ETEAW APNLP VKSL LGWFEPL++ + E
Sbjct: 135 YTSLRRRQIRIETEAWEQAANEYRELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIATE 194
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMA 131
Q+ +AS P LPA +AVI MHK+M L+M +G V+++QAA QIG A
Sbjct: 195 QEL--VADPGSRASHGPFFSMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEA 252
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADT---EENLNNDKEKQRKFVNGLIKRKKLKEVHVVL 188
+E EVRI++FLE + +K+ E + + N+ ++++ RK V L+K++KL++V ++
Sbjct: 253 IEHEVRINRFLEKTRKKNNKEMENEEEAGDTNIAVEQQRLRKKVTDLMKKQKLRQVRNIV 312
Query: 189 K-QEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSP 247
K Q++ PW + A AK+GSRLI+L I TA++ P +QS+D PDIRPAFRH + +
Sbjct: 313 KNQDKSRPWGQDAHAKVGSRLIDLFIGTAHIQPPASQSSDGLPDIRPAFRHEMRTMVKE- 371
Query: 248 GQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT 307
QK + YGVI+CDPLV GL++ AKH W GYDKG HLFLPSY+MRT
Sbjct: 372 QQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRT 431
Query: 308 HGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE 367
HG+R+Q+D +K EQMQ VFEAL+ LG+TK R+N R+L +V+ IW+ GG +A LVD
Sbjct: 432 HGARQQRDAVKRAPREQMQFVFEALNTLGSTKWRVNKRVLSIVDRIWSNGGRLADLVDRT 491
Query: 368 NVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPH 427
+VP+P+KP TED ++ WK+ +R AKK N ERHSQRCD ELKL+VARKMKDE+ FYYPH
Sbjct: 492 DVPVPEKPDTEDETLLKNWKWHLRAAKKKNSERHSQRCDVELKLAVARKMKDEEGFYYPH 551
Query: 428 NLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSY 487
NLDFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLYA G++KLSY
Sbjct: 552 NLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAAGVDKLSY 611
Query: 488 DGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHL 547
DGR+ F ENH+ +IFDSAD P+ G RW L AEDPFQCLA C+NL+EALRSSSP + ISH+
Sbjct: 612 DGRIAFAENHLEEIFDSADRPLEGRRWRLGAEDPFQCLAVCMNLTEALRSSSPETTISHI 671
Query: 548 PIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPST 607
P+HQDGSCNGLQHYAALG+D+L A AVNLVA EKPADVY+ IA RV +IMR D+ KDPS
Sbjct: 672 PVHQDGSCNGLQHYAALGKDKLGAIAVNLVAGEKPADVYTGIANRVMEIMRMDAQKDPSV 731
Query: 608 FPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAAC 667
P+A A++++DQ+DRKLVKQTVMTSVYGVTYIGAR+QI++RL+E+G+I +D LF A+C
Sbjct: 732 EPDAARARLIVDQVDRKLVKQTVMTSVYGVTYIGAREQIRRRLKERGVIPNDSELFGASC 791
Query: 668 YAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
YAAKVTL ALGE+F+AAR IM+WLGDCAKVIA EN+ V WTTPLGLPVVQPY K RHL+
Sbjct: 792 YAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLI 851
>K3XV30_SETIT (tr|K3XV30) DNA-directed RNA polymerase OS=Setaria italica
GN=Si005787m.g PE=3 SV=1
Length = 966
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/715 (59%), Positives = 546/715 (76%), Gaps = 9/715 (1%)
Query: 16 LRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKA 75
LR+RQ++AETEAW AP LP VKSL +GWFEPL++A+ +Q
Sbjct: 134 LRQRQVKAETEAWARAAEEYREIEREMLDRRLAPALPYVKSLFVGWFEPLRDAIARDQDV 193
Query: 76 HQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQIGMALE 133
R K+ + A + LPA K+AVIVMHKMM L+M +++G V++VQAA IG A+E
Sbjct: 194 Q--RRKRVKHVYAKYLLLLPADKIAVIVMHKMMGLLMSSKDGTGSVRVVQAAHCIGEAVE 251
Query: 134 QEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQE-E 192
+E ++ F + ++ KK + + ++ L ++ K RK V L++R+K+ E +++QE E
Sbjct: 252 REFKVQSFFQKSRK---KKDQGENDQALEMEQAKCRKRVKTLVRRRKMTEAQKLVQQELE 308
Query: 193 VSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKIL 252
+ W AQ KLGSRLIELL+++A+V P +Q+ D+ PDIRPAFRH + Q ++
Sbjct: 309 LEEWGTEAQVKLGSRLIELLLDSAFVQPPADQTPDSSPDIRPAFRHVLR-QPIIENGRLK 367
Query: 253 KNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRK 312
K + VI+CD LV G E A+H KKWKGYDKGGHLFLPSYIMRTHG +
Sbjct: 368 KKHWVIECDHLVHEGFESTARHVDIPYLPMLVPPKKWKGYDKGGHLFLPSYIMRTHGVKD 427
Query: 313 QQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLP 372
Q+D +K+V +Q+QKVFEALDILG+TK R+N R+ DVVE+IW+ GG +AGLVD N+PLP
Sbjct: 428 QKDAIKSVPRKQLQKVFEALDILGSTKWRVNRRVHDVVETIWSRGGGIAGLVDKANIPLP 487
Query: 373 DKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFR 432
++P +ED ++Q+WK+ ++KAKK N E H++RCDTELKLSVARKM++ED FYYPHNLDFR
Sbjct: 488 ERPESEDPDEMQKWKWSLKKAKKTNRELHAERCDTELKLSVARKMREEDGFYYPHNLDFR 547
Query: 433 GRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLG 492
GRAYPMHPHL+HLGSDLCRG+LE+AEGRPLGKSGL WLKIHLAN Y GG+EKLS++G+L
Sbjct: 548 GRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLCWLKIHLANKYGGGVEKLSHEGKLA 607
Query: 493 FVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQD 552
FVEN + DIFDSA NPV+GNRWW AEDPFQCLAAC++LS+AL+SSSP +SHLPIHQD
Sbjct: 608 FVENQLLDIFDSAANPVDGNRWWTNAEDPFQCLAACMDLSDALKSSSPYRAVSHLPIHQD 667
Query: 553 GSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNAL 612
GSCNGLQHYAALGRD + A VNLV EKPAD+YSEIA RV D++R DS KDP+T PNA
Sbjct: 668 GSCNGLQHYAALGRDYMGAVVVNLVPGEKPADIYSEIAARVLDVVREDSMKDPATNPNAS 727
Query: 613 LAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKV 672
LA+VL+DQ+DRKLVKQTVMTSVYGVTYIGAR QI KRL+EKGLITDD+LL+ +CYA +V
Sbjct: 728 LARVLVDQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKGLITDDKLLYDVSCYATRV 787
Query: 673 TLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
TL ALG++F++ARGIM+WLGDCAK+IA +NQ V WT+P+GLPVVQPY K + +++
Sbjct: 788 TLDALGQMFQSARGIMAWLGDCAKMIASKNQPVKWTSPVGLPVVQPYKKYKNYMI 842
>Q70XR1_HORVD (tr|Q70XR1) DNA-directed RNA polymerase OS=Hordeum vulgare var.
distichum GN=rpoT PE=3 SV=1
Length = 948
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/715 (59%), Positives = 543/715 (75%), Gaps = 6/715 (0%)
Query: 16 LRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKA 75
LR+RQ++AETEAW AP LP VKSL LGWFEPL++AV +Q
Sbjct: 113 LRQRQVKAETEAWARAAEEYRQLEREMLDRNLAPQLPYVKSLFLGWFEPLRDAVARDQDV 172
Query: 76 HQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQIGMALE 133
R K+ + A + LP KVAVIVMHKMM L+M +++GC V++VQAA IG A+E
Sbjct: 173 Q--RRKRVKHVYAKYLLLLPPEKVAVIVMHKMMGLLMSSKDGCGSVRVVQAAHSIGEAVE 230
Query: 134 QEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQE-E 192
+E ++ F + + K E++ + L+ ++ K RK V L++R+KL E +++QE E
Sbjct: 231 REYKVQAFFQKTRRKTRSKNESENDPALDKEQAKCRKLVKSLVRRRKLTEAQKLVQQEIE 290
Query: 193 VSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKIL 252
+ W AQ KLG+RLIELL+++A+V SP NQ+ D PD RPAF+H + G ++
Sbjct: 291 LEEWGAEAQVKLGTRLIELLLDSAFVQSPANQTPDNSPDFRPAFKHVLRKPIVENG-RLK 349
Query: 253 KNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRK 312
K + VI+CDPLV G E A+H KWKGYDKGGHLFLPSY+MRTHG +
Sbjct: 350 KKHFVIECDPLVHEGFESTARHVEIPYLPMLVPPTKWKGYDKGGHLFLPSYVMRTHGVKD 409
Query: 313 QQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLP 372
Q++ +K+V +Q++KVFEALDILG TK R+N R+ DVVE+IW+ GG +AGLVD EN+PLP
Sbjct: 410 QKEAIKSVPRKQLRKVFEALDILGGTKWRVNRRVHDVVETIWSRGGGIAGLVDKENIPLP 469
Query: 373 DKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFR 432
++P TED +IQ+W++ V+K KK N E H++RCDTELKLSVARKM++ED FYYPHNLDFR
Sbjct: 470 ERPETEDPDEIQKWRWSVKKTKKTNRELHAERCDTELKLSVARKMREEDGFYYPHNLDFR 529
Query: 433 GRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLG 492
GRAYPMHPHL+HLGSDLCRG+LE+ EGRPLGKSGLRWLKIHLAN Y GGIEKL+++ +L
Sbjct: 530 GRAYPMHPHLSHLGSDLCRGVLEYGEGRPLGKSGLRWLKIHLANKYGGGIEKLTHESKLA 589
Query: 493 FVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQD 552
FVE+ + IFDSA NPV+GN WW+ AED FQCLAACI+LS+AL+SSSP++ +SHLPIHQD
Sbjct: 590 FVEDRLPAIFDSAANPVDGNCWWINAEDSFQCLAACIDLSDALKSSSPHAAVSHLPIHQD 649
Query: 553 GSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNAL 612
GSCNGLQHYAALGRD + AAAVNLV EKPAD+YSEIA RV +++R DS KDP+T P+
Sbjct: 650 GSCNGLQHYAALGRDYMGAAAVNLVPGEKPADIYSEIAARVLNVVREDSMKDPATDPSVP 709
Query: 613 LAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKV 672
LA+VL+DQ+DRKLVKQTVMTSVYGVT+IGAR QI KRL+EKG ITD++LL+ +CYAA+V
Sbjct: 710 LARVLVDQVDRKLVKQTVMTSVYGVTFIGARQQIMKRLQEKGHITDEKLLYDVSCYAARV 769
Query: 673 TLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
TL ALG++F++ARGIM+WLGDCAK+IA +NQ V WT+P+GLPVVQPY K + +++
Sbjct: 770 TLDALGQMFQSARGIMAWLGDCAKMIASKNQPVRWTSPVGLPVVQPYKKYKNYMI 824
>I1GVM2_BRADI (tr|I1GVM2) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI1G31066 PE=3 SV=1
Length = 943
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/713 (59%), Positives = 542/713 (76%), Gaps = 9/713 (1%)
Query: 18 RRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKAHQ 77
+RQ++AETEAW AP+LP VKSL LGWFEPL++A+ +Q+
Sbjct: 113 QRQVKAETEAWARAAEEYRQLEREMLDRNLAPSLPYVKSLFLGWFEPLRDAIARDQEVQ- 171
Query: 78 ARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQIGMALEQE 135
R K+ + A + LPA KV+VIVMHKMM L+M N++GC V++VQAA IG A+E+E
Sbjct: 172 -RRKRVKHVYAKYLLLLPAEKVSVIVMHKMMGLLMSNKDGCGSVRVVQAAHSIGEAVERE 230
Query: 136 VRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQE-EVS 194
++ F + + K + + L ++ K RK V L+KR+KL E +++QE E+
Sbjct: 231 FKVQAFFQKTRK---KGKNGENDPALGKEQAKCRKLVKSLVKRRKLTEAQKLVQQEIELE 287
Query: 195 PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKN 254
W AQ KLG+RLIELL+++A+V SP +Q D+ PD RPAF+H + G ++ K
Sbjct: 288 EWGTEAQVKLGTRLIELLLDSAFVQSPADQIPDSSPDFRPAFKHVLRKPIVENG-RLKKK 346
Query: 255 YGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQ 314
+ VI+CDPLV G E A+H KWKGYDKGGHLFLPSY+MRTHG + Q+
Sbjct: 347 HFVIECDPLVHEGFESTARHVEIPYLPMLVPPTKWKGYDKGGHLFLPSYVMRTHGVKDQK 406
Query: 315 DVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDK 374
+ +K+V +Q++KVFEALDILG TK R+N R+ DVVE+IW+ GG +AGLVD ++PLP++
Sbjct: 407 EAIKSVPRKQLRKVFEALDILGGTKWRVNRRVHDVVETIWSRGGGIAGLVDKGDIPLPER 466
Query: 375 PPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGR 434
P +ED +IQ+WK+ ++KAKK+N E H++RCDTELKLSVARKM++ED FYYPHNLDFRGR
Sbjct: 467 PESEDPDEIQKWKWSLKKAKKINRELHAERCDTELKLSVARKMREEDGFYYPHNLDFRGR 526
Query: 435 AYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFV 494
AYPMHPHL+HLGSDLCRG+LE+AEGRPLGKSGLRWLKIHLAN Y GGIEKLS+ +L FV
Sbjct: 527 AYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHGSKLAFV 586
Query: 495 ENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGS 554
ENH+ DIFDSA NPV+GNRWW+ AEDPFQCLAAC++LS AL+SSSP++ ISHLPIHQDGS
Sbjct: 587 ENHLPDIFDSAANPVDGNRWWINAEDPFQCLAACVDLSNALKSSSPHTAISHLPIHQDGS 646
Query: 555 CNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLA 614
CNGLQHYAALGRD + AAAVNLV EKPAD+YSEIA RV D++R DS KDP+T + LA
Sbjct: 647 CNGLQHYAALGRDYMGAAAVNLVPGEKPADIYSEIAARVLDVVREDSMKDPATDASVSLA 706
Query: 615 KVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTL 674
KVL+DQ+DRKLVKQTVMTSVYGVT+IGAR QI KRL+EKG ITDD+LL+ +CYA +VTL
Sbjct: 707 KVLVDQVDRKLVKQTVMTSVYGVTFIGARQQIMKRLQEKGHITDDKLLYEVSCYATRVTL 766
Query: 675 AALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
ALG++F++AR IM+WLGDCAK+IA +NQ V WT+P+GLPVVQPY K + +++
Sbjct: 767 DALGQMFQSARAIMAWLGDCAKMIASKNQPVKWTSPVGLPVVQPYKKYKNYMI 819
>I1GVM3_BRADI (tr|I1GVM3) DNA-directed RNA polymerase OS=Brachypodium distachyon
GN=BRADI1G31066 PE=3 SV=1
Length = 915
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/713 (59%), Positives = 542/713 (76%), Gaps = 9/713 (1%)
Query: 18 RRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKAHQ 77
+RQ++AETEAW AP+LP VKSL LGWFEPL++A+ +Q+
Sbjct: 113 QRQVKAETEAWARAAEEYRQLEREMLDRNLAPSLPYVKSLFLGWFEPLRDAIARDQEVQ- 171
Query: 78 ARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQIGMALEQE 135
R K+ + A + LPA KV+VIVMHKMM L+M N++GC V++VQAA IG A+E+E
Sbjct: 172 -RRKRVKHVYAKYLLLLPAEKVSVIVMHKMMGLLMSNKDGCGSVRVVQAAHSIGEAVERE 230
Query: 136 VRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQE-EVS 194
++ F + + K + + L ++ K RK V L+KR+KL E +++QE E+
Sbjct: 231 FKVQAFFQKTRK---KGKNGENDPALGKEQAKCRKLVKSLVKRRKLTEAQKLVQQEIELE 287
Query: 195 PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKN 254
W AQ KLG+RLIELL+++A+V SP +Q D+ PD RPAF+H + G ++ K
Sbjct: 288 EWGTEAQVKLGTRLIELLLDSAFVQSPADQIPDSSPDFRPAFKHVLRKPIVENG-RLKKK 346
Query: 255 YGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQ 314
+ VI+CDPLV G E A+H KWKGYDKGGHLFLPSY+MRTHG + Q+
Sbjct: 347 HFVIECDPLVHEGFESTARHVEIPYLPMLVPPTKWKGYDKGGHLFLPSYVMRTHGVKDQK 406
Query: 315 DVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDK 374
+ +K+V +Q++KVFEALDILG TK R+N R+ DVVE+IW+ GG +AGLVD ++PLP++
Sbjct: 407 EAIKSVPRKQLRKVFEALDILGGTKWRVNRRVHDVVETIWSRGGGIAGLVDKGDIPLPER 466
Query: 375 PPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGR 434
P +ED +IQ+WK+ ++KAKK+N E H++RCDTELKLSVARKM++ED FYYPHNLDFRGR
Sbjct: 467 PESEDPDEIQKWKWSLKKAKKINRELHAERCDTELKLSVARKMREEDGFYYPHNLDFRGR 526
Query: 435 AYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFV 494
AYPMHPHL+HLGSDLCRG+LE+AEGRPLGKSGLRWLKIHLAN Y GGIEKLS+ +L FV
Sbjct: 527 AYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHGSKLAFV 586
Query: 495 ENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGS 554
ENH+ DIFDSA NPV+GNRWW+ AEDPFQCLAAC++LS AL+SSSP++ ISHLPIHQDGS
Sbjct: 587 ENHLPDIFDSAANPVDGNRWWINAEDPFQCLAACVDLSNALKSSSPHTAISHLPIHQDGS 646
Query: 555 CNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLA 614
CNGLQHYAALGRD + AAAVNLV EKPAD+YSEIA RV D++R DS KDP+T + LA
Sbjct: 647 CNGLQHYAALGRDYMGAAAVNLVPGEKPADIYSEIAARVLDVVREDSMKDPATDASVSLA 706
Query: 615 KVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTL 674
KVL+DQ+DRKLVKQTVMTSVYGVT+IGAR QI KRL+EKG ITDD+LL+ +CYA +VTL
Sbjct: 707 KVLVDQVDRKLVKQTVMTSVYGVTFIGARQQIMKRLQEKGHITDDKLLYEVSCYATRVTL 766
Query: 675 AALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
ALG++F++AR IM+WLGDCAK+IA +NQ V WT+P+GLPVVQPY K + +++
Sbjct: 767 DALGQMFQSARAIMAWLGDCAKMIASKNQPVKWTSPVGLPVVQPYKKYKNYMI 819
>M4E430_BRARP (tr|M4E430) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra023533 PE=3 SV=1
Length = 975
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/737 (59%), Positives = 538/737 (72%), Gaps = 17/737 (2%)
Query: 1 MRAEQEVREAET-FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLL 59
MR ++ V + + L RRQ++ ETE W APNLP VKSL L
Sbjct: 122 MRNQESVGMGRSKYRNLWRRQVKIETEEWERAANEYRELLADMCEQKLAPNLPYVKSLFL 181
Query: 60 GWFEPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMEN-EEGC 118
GWFEPL++ + EQ+ R K +A A +D LPA VAVI MHK+M +M + GC
Sbjct: 182 GWFEPLRDVISKEQELF--RLGKSKAVYAHYIDQLPADMVAVITMHKLMGHLMTGGDNGC 239
Query: 119 VQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEE-------NLNNDKEKQRKF 171
V++VQAA +G A+EQE+RI FL+ + KK E D EE N +++K RK
Sbjct: 240 VKVVQAACSVGDAIEQEIRICTFLDKTR----KKEEDDNEESGEVENGNPMREQDKLRKK 295
Query: 172 VNGLIKRKKLKEVHVVLKQEEVS-PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPP 230
VN LIK++KL V +L+ + + PWS A+AK+GS LIELL+ TAY+ SP NQ + P
Sbjct: 296 VNDLIKKQKLSAVRKILQSHDYTKPWSADARAKVGSHLIELLVRTAYIQSPTNQQDNDLP 355
Query: 231 DIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWK 290
D+RPAF+H FK ++ K + YGVI+CDPLV GLEK ++ W
Sbjct: 356 DVRPAFKHTFKTVAQG-SMKSGRKYGVIECDPLVRKGLEKTGRYAVMPYMPMLVPPLNWS 414
Query: 291 GYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVV 350
GYDKG +LFL SYIM+THG+++Q++ +K+ Q++ VFEALD LG+T+ R+N R+L VV
Sbjct: 415 GYDKGAYLFLASYIMKTHGAKQQREAIKSAPKGQLKPVFEALDTLGSTRWRVNKRVLTVV 474
Query: 351 ESIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELK 410
+ IW+ GG A LVD +VPLP+KP TED +++WK+ ++ AKK N ERHS RCD ELK
Sbjct: 475 DRIWSSGGCTADLVDRSDVPLPEKPDTEDESILKKWKWEMKSAKKENSERHSLRCDIELK 534
Query: 411 LSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWL 470
LSVARKMKDE+ FYYPHN+DFRGRAYPM PHLNHLGSDLCRG+LEFAEGRPLG GLRWL
Sbjct: 535 LSVARKMKDEEGFYYPHNVDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPLGSPGLRWL 594
Query: 471 KIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACIN 530
KIHLANLYAGG++KLSY+GRL F E+H+ DIFDSAD P+ GNRWWL+AEDPFQCLA CIN
Sbjct: 595 KIHLANLYAGGVDKLSYEGRLAFTESHLDDIFDSADRPLEGNRWWLQAEDPFQCLAVCIN 654
Query: 531 LSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIA 590
L+EALRS SP +V+SH+PIHQDGSCNGLQHYAALGRD + A AVNLVA EKPADVYSEIA
Sbjct: 655 LTEALRSPSPETVLSHIPIHQDGSCNGLQHYAALGRDTIGAEAVNLVAGEKPADVYSEIA 714
Query: 591 VRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRL 650
RV DIMRRD++KDP +P+AL A+ LI+Q+DRKLVKQTVMTSVYGVTYIGARDQIK+RL
Sbjct: 715 TRVLDIMRRDADKDPEIYPDALRARKLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 774
Query: 651 EEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTP 710
+E+ +DD+ +F AACYAAKVTLAA+ E+FEAAR IM W G+CAK+IA EN+ V WTTP
Sbjct: 775 KERSAFSDDKEIFGAACYAAKVTLAAMDEMFEAARAIMHWFGECAKIIASENETVRWTTP 834
Query: 711 LGLPVVQPYCKTERHLV 727
LGLPVVQPY + LV
Sbjct: 835 LGLPVVQPYLQMGTKLV 851
>F4I0I3_ARATH (tr|F4I0I3) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=MGP3 PE=2 SV=1
Length = 983
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/734 (58%), Positives = 535/734 (72%), Gaps = 19/734 (2%)
Query: 10 AETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAV 69
A+ F L++RQ++ ETE W APNLP +KSL LGWFEP++ A+
Sbjct: 129 AQKFYMLKQRQVKMETEEWERAARECREILADMCEQKLAPNLPYMKSLFLGWFEPVRNAI 188
Query: 70 EAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQ 127
+ + + KK + AP ++ LPA K+AVI MHKMM L+M N EG V+LV AA Q
Sbjct: 189 QDDLDTFKI--KKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNAEGVGIVKLVNAATQ 246
Query: 128 IGMALEQEVRIHKFLEG----NKSLQSKKTEAD--TEENLNNDKEKQRKFVNGLIKRKKL 181
IG A+EQEVRI+ FL+ N + ++ TEA+ +EE + + EK RK V L+++ KL
Sbjct: 247 IGEAVEQEVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEKARKQVTVLMEKNKL 306
Query: 182 KEVH-VVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGF 240
++V +V K + PW + AQ K+G+RLI+LL+E AY+ P Q D PPDIRPAF+ F
Sbjct: 307 RQVKALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQNF 366
Query: 241 KPQSRSPGQKILKNYGVIQCDPLVLAGLEKC-------AKHXXXXXXXXXXXXKKWKGYD 293
+ + K + YG I+CDPLVL GL+K A+H + W GYD
Sbjct: 367 RTVTLE-NTKTSRRYGCIECDPLVLKGLDKSVSRIVDYARHMVIPYLPMLIPPQNWTGYD 425
Query: 294 KGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESI 353
+G H FLPSY+MRTHG+++Q+ VMK EQ++ V+EALD LGNTK +IN ++L +V+ I
Sbjct: 426 QGAHFFLPSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVLSLVDRI 485
Query: 354 WAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSV 413
WA GG + GLVD E+VP+P++P ED ++ + W++ +KA K N ERHSQRCD ELKL V
Sbjct: 486 WANGGRIGGLVDREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDIELKLEV 545
Query: 414 ARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIH 473
ARKMKDE+ FYYPHN+DFRGRAYP+HP+LNHLGSDLCRG+LEF EG+PLGKSGLRWLKIH
Sbjct: 546 ARKMKDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIH 605
Query: 474 LANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSE 533
+ANLYAGG++KL+Y+ R+ F E+H+ DIFDS+D P+ G RWWL AEDPFQCLAACINLSE
Sbjct: 606 IANLYAGGVDKLAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACINLSE 665
Query: 534 ALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRV 593
ALRS P + ISH+PIHQDGSCNGLQHYAALGRD+L A AVNLV EKPADVY+EIA RV
Sbjct: 666 ALRSPFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYTEIAARV 725
Query: 594 HDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEK 653
IM++D+ +DP TFPNA AK+++DQ+DRKLVKQTVMTSVYGVTY GARDQIKKRL+E+
Sbjct: 726 LKIMQQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKER 785
Query: 654 GLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGL 713
G DD L F A+CYAAK+TL AL E+FEAAR I SW GDCAK+IA EN AV WTTPLGL
Sbjct: 786 GTFEDDSLTFHASCYAAKITLKALEEMFEAARAIKSWFGDCAKIIASENNAVCWTTPLGL 845
Query: 714 PVVQPYCKTERHLV 727
PVVQPY K RHLV
Sbjct: 846 PVVQPYRKPGRHLV 859
>K4BXN8_SOLLC (tr|K4BXN8) DNA-directed RNA polymerase OS=Solanum lycopersicum
GN=Solyc05g010660.2 PE=3 SV=1
Length = 993
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/717 (61%), Positives = 540/717 (75%), Gaps = 7/717 (0%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
++ LRRRQI+ ETEAW APNLP +KSL LGWFEPLK+A+ AE
Sbjct: 158 YNLLRRRQIKVETEAWEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLKDAIAAE 217
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMA 131
QK K + + AP D LPA +AVI MHK+M L+M G ++VQAA IG A
Sbjct: 218 QKL--CDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAASHIGEA 275
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQE 191
+E E RIH+FLE K + +T ++ ++E+ RK V L+K++KL++V ++KQ+
Sbjct: 276 IEHEARIHRFLEKTKKNALDGSLEETAGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQ 335
Query: 192 E-VSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQK 250
+ PW + K+G RLI++LIETAY+ P +Q D PPDIRPAF H K G +
Sbjct: 336 DDEKPWGQDNLVKVGCRLIQILIETAYIQPPNDQLEDCPPDIRPAFMHTLKTVDTVKGSR 395
Query: 251 ILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGS 310
YGVIQCDPLV GL+K A+H + W GYD+G +LFLPSYIMRTHG+
Sbjct: 396 ---RYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHGA 452
Query: 311 RKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVP 370
++Q++ +K V +Q++ VF+ALD LGNTK R+N R+L +++ IWA GG +A LVD E+VP
Sbjct: 453 KQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDVP 512
Query: 371 LPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLD 430
LP++P TE+ ++I++WK++V+ AKK N ERHSQRCD ELKL+VARKMKDE+ FYYPHNLD
Sbjct: 513 LPEEPDTENEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNLD 572
Query: 431 FRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGR 490
FRGRAYPMHP+LNHLGSDLCRG+LEF+EGRPLGKSGLRWLKIHLAN+Y GG++KLS +GR
Sbjct: 573 FRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSCEGR 632
Query: 491 LGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIH 550
F ENH+ DIFDSAD P+ G RWWL AEDPFQCLA CI++SEALRS SP + ISH+PIH
Sbjct: 633 AAFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCISISEALRSPSPETSISHMPIH 692
Query: 551 QDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPN 610
QDGSCNGLQHYAALGRD+L AAAVNLVA +KPADVYS IA RV DIM+RD++KDP+T PN
Sbjct: 693 QDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPN 752
Query: 611 ALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAA 670
+ A++LI+Q+DRKLVKQTVMTSVYGVTYIGARDQIK+RL+E+G I DD LF AACYAA
Sbjct: 753 VMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFAAACYAA 812
Query: 671 KVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
K TL ALGE+FEAAR IMSWLGDCAK+IA ENQ V WTTPLGLPVVQPY K RHL+
Sbjct: 813 KTTLTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRHLI 869
>Q84LK5_ORYSJ (tr|Q84LK5) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=rpoT2 PE=2 SV=1
Length = 953
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/715 (59%), Positives = 544/715 (76%), Gaps = 10/715 (1%)
Query: 16 LRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKA 75
LR+RQ++AETEAW AP LP VKSL LGWFEPL++A+ +Q+
Sbjct: 122 LRQRQVKAETEAWARAADEYRELEREMLDRRLAPALPYVKSLFLGWFEPLRDAIARDQEV 181
Query: 76 HQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQIGMALE 133
R K+ + A + LPA KVAVIVMHKMM L+M +++G V++VQAA IG A+E
Sbjct: 182 Q--RRKRVKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGVASVRVVQAAHCIGEAVE 239
Query: 134 QEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQE-E 192
+E ++ F + + KK+ + + L ++ K RK V L++R+KL E +++QE E
Sbjct: 240 REFKVQTFFQKTR----KKSAGENDLALEKEQAKCRKRVKSLVRRRKLTEAQKIVQQEIE 295
Query: 193 VSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKIL 252
+ W +Q KLG+RLIELL+++A+V SP +Q+ ++ PDIRPAF+H + Q ++
Sbjct: 296 LEEWGTESQVKLGTRLIELLLDSAFVQSPADQTPESSPDIRPAFKHVLR-QPIVENGRLK 354
Query: 253 KNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRK 312
K + VI+CDPLV G E A+H KKWKGYD GG+LFLPSYIMRTHG +
Sbjct: 355 KKHWVIECDPLVHEGFESTARHVEIPYLPMLVTPKKWKGYDTGGYLFLPSYIMRTHGVKD 414
Query: 313 QQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLP 372
Q++ +K+V +Q++KVFEALD LG+TK R+N R+ + VE+IW+ GG +AGLVD EN+PLP
Sbjct: 415 QKEAIKSVPRKQLRKVFEALDTLGSTKWRVNRRVHNAVETIWSRGGGIAGLVDKENIPLP 474
Query: 373 DKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFR 432
++P TED +IQ+WK+ ++KAKK N E H++RCDTELKLSVARKM++ED FYYPHNLDFR
Sbjct: 475 ERPETEDPDEIQKWKWSLKKAKKANRELHAERCDTELKLSVARKMREEDGFYYPHNLDFR 534
Query: 433 GRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLG 492
GRAYPMH HL+HLGSDLCRG+LE+AEGRPLGKSGLRWLKIHLAN Y GGIEKLS++ ++
Sbjct: 535 GRAYPMHAHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHEDKVA 594
Query: 493 FVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQD 552
FVEN + DIFDSA NPV+GN WW+ AEDPFQCLAAC++LS+AL+SSSP +SHLPIHQD
Sbjct: 595 FVENQLPDIFDSATNPVDGNCWWMNAEDPFQCLAACMDLSDALKSSSPQCAVSHLPIHQD 654
Query: 553 GSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNAL 612
GSCNGLQHYAALGRD + AAAVNLV +KPAD+YSEIA RV D++R DS +DP+T P A
Sbjct: 655 GSCNGLQHYAALGRDYMGAAAVNLVPGDKPADIYSEIAARVLDVVREDSMEDPATNPTAS 714
Query: 613 LAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKV 672
LA+VL+DQ+DRKLVKQTVMTSVYGVTYIGAR QI KRL+EKGLITDD+LL+ +CYA +V
Sbjct: 715 LARVLVDQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKGLITDDKLLYEVSCYATRV 774
Query: 673 TLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
TL ALG++F++ARGIM+WLGDCAK+IA EN V WT+P+GLPVVQPY K + +++
Sbjct: 775 TLDALGQMFQSARGIMAWLGDCAKMIASENHPVKWTSPVGLPVVQPYKKYKNYMI 829
>Q9MQV1_WHEAT (tr|Q9MQV1) DNA-directed RNA polymerase OS=Triticum aestivum PE=2
SV=1
Length = 1005
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/720 (60%), Positives = 543/720 (75%), Gaps = 9/720 (1%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ +LR+RQI ETEAW APNLP VKSL L WFEPL++ + AE
Sbjct: 166 YVSLRQRQIRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLSWFEPLRDQIIAE 225
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMA 131
Q+ R + AS AP + LPA +AVI MHK+M L+M +G V+++QAA QIG A
Sbjct: 226 QELVSERGTR--ASHAPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEA 283
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTEE---NLNNDKEKQRKFVNGLIKRKKLKEV-HVV 187
+E EVRIHKFLE K +K+ + E ++ ++E+ RK V L+K++K+++V H+V
Sbjct: 284 VEHEVRIHKFLEKTKKKNTKEVDKVVEAVDADIAKEQERLRKKVTDLMKKQKIRQVRHLV 343
Query: 188 LKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSP 247
KQ+ PW + A AK+GSRLIEL IETA++ P +QS D+ P+IRPAF H + +R
Sbjct: 344 KKQDSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSGDSTPEIRPAFTHEMRTVARE- 402
Query: 248 GQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT 307
Q+ + YGVI+CDPLV GL++ AKH W GYDKG HLFLPSY+MRT
Sbjct: 403 -QRKSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPINWTGYDKGAHLFLPSYVMRT 461
Query: 308 HGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE 367
HG+R+Q++ +K EQMQ +FEALD LG+TK R+N +L +V+ IW+ GG +A LVD
Sbjct: 462 HGARQQREAVKKAPKEQMQTIFEALDNLGSTKWRVNKEVLSIVDRIWSSGGRLADLVDRA 521
Query: 368 NVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPH 427
+V LP+KP TED ++++W++ +R A+K N ERHSQRCD ELKL+VARKMK+E FYYPH
Sbjct: 522 DVSLPEKPDTEDEAELKKWRWSMRSAEKENSERHSQRCDVELKLAVARKMKEEAGFYYPH 581
Query: 428 NLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSY 487
NLDFRGRAYPMHP+LNHLGSDLCRG+LEF+EGRPLG+SGLRWLKIHLANLY GG++KLSY
Sbjct: 582 NLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIHLANLYGGGVDKLSY 641
Query: 488 DGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHL 547
DGR+ F ENH+ DIFDSA+ P+ G RWWL AEDPFQCLA C++L+EALRS SP +VISH+
Sbjct: 642 DGRIAFTENHLDDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNEALRSPSPETVISHI 701
Query: 548 PIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPST 607
P+HQDGSCNGLQHYAALGRD+L A AVNLV+ EKPADVYS IA RV +IM+RD+ KDP+
Sbjct: 702 PVHQDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARVVEIMKRDAQKDPAK 761
Query: 608 FPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAAC 667
+A A++L+DQ+DRKLVKQTVMTSVYGVTY+GAR+QIK+RL+E+G+I DD LF A+C
Sbjct: 762 DADAARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIADDSELFGASC 821
Query: 668 YAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
YAAKVTL ALGE+FEAAR IM+WLGDCAKVIA EN+ V WTTPLGLPVVQPY K RHL+
Sbjct: 822 YAAKVTLTALGEMFEAARSIMTWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLI 881
>D7M7F2_ARALL (tr|D7M7F2) DNA-directed RNA polymerase OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_909544 PE=3 SV=1
Length = 1009
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/720 (59%), Positives = 531/720 (73%), Gaps = 13/720 (1%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
F L RRQ++ ETE W APNLP VKSL LGWFEPL++A+ +
Sbjct: 174 FQNLWRRQVKIETEEWERAAAEYMELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAKD 233
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMEN-EEGCVQLVQAAVQIGMA 131
Q+ + R K +A+ A +D LPA K++VI MHK+M +M + GCV++V AA +G A
Sbjct: 234 QELY--RLGKSKATYAHYLDQLPADKISVITMHKLMGHLMTGGDNGCVKVVHAACTVGDA 291
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTE-ENLNNDKE--KQRKFVNGLIKRKKLKEVHVVL 188
+EQE+RI FL+ + + + E E EN + KE K RK VN LIK++KL V +L
Sbjct: 292 IEQEIRICTFLDKTRKKKGDENEESGEVENGTSMKEQDKLRKKVNELIKKQKLSAVRKIL 351
Query: 189 KQEEVS-PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSP 247
+ + + PW +AK+GSRLIELL+ TAY+ SP +Q + PD+RPAF H F+ +
Sbjct: 352 QSHDYTKPWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFVHTFRIANSG- 410
Query: 248 GQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT 307
+ YGVI+CDPLV GLEK ++ KW GYDKG +LFL SYIM+T
Sbjct: 411 -----RKYGVIECDPLVRKGLEKSGRYAVIPYMPMLVPPLKWSGYDKGAYLFLASYIMKT 465
Query: 308 HGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE 367
HGS++Q++ +K+ Q+ VFEALD LG+TK R+N R+L VV+ IW+ GG A LVD
Sbjct: 466 HGSKQQREALKSAPKGQLLPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCTADLVDRS 525
Query: 368 NVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPH 427
+VPLP+KP TED +++WK+ V+ AKK+N ERHSQRCDTELKLSVARKMKDE+ FYYPH
Sbjct: 526 DVPLPEKPDTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKMKDEEAFYYPH 585
Query: 428 NLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSY 487
N+DFRGRAYPM PHLNHLGSDLCRG+LEFAEGRPLG SGLRWLKIHLANLYAGG++KLS
Sbjct: 586 NMDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPLGISGLRWLKIHLANLYAGGVDKLSL 645
Query: 488 DGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHL 547
DGRL F ENH+ DIFDSAD P+ G+RWWL+AEDPFQCLA CINL+EALRS SP +V+SH+
Sbjct: 646 DGRLAFTENHLEDIFDSADRPLEGSRWWLQAEDPFQCLAVCINLTEALRSPSPETVLSHI 705
Query: 548 PIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPST 607
PIHQDGSCNGLQHYAALGRD L A AVNLVA EKPADVYS IA RV DIMRRD+++DP
Sbjct: 706 PIHQDGSCNGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIMRRDADRDPEA 765
Query: 608 FPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAAC 667
+P+AL A+ L++Q+DRKLVKQTVMTSVYGVTYIGARDQIK+RL+E+ D++ +F AAC
Sbjct: 766 YPDALRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEKEIFGAAC 825
Query: 668 YAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
YAAKVTLAA+ E+F+AAR IM W GDCAK+IA EN+ V WTTPLGLPVVQPY + LV
Sbjct: 826 YAAKVTLAAIDEMFQAARAIMRWFGDCAKIIASENETVRWTTPLGLPVVQPYHQMGTKLV 885
>K7MV39_SOYBN (tr|K7MV39) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 1046
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/728 (59%), Positives = 541/728 (74%), Gaps = 21/728 (2%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ LRRRQ++ ETE W APNLP +KSL LGWFEPL++A+ E
Sbjct: 203 YQELRRRQVKIETEMWEEAAKEYRELLMDMCEHKLAPNLPYMKSLFLGWFEPLRDAIVKE 262
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEE----GCVQLVQAAVQI 128
Q+ + K + + AP LPA K+AVI MHK+M L+M E G ++VQAA I
Sbjct: 263 QEMYS--EGKNRMAYAPYFVQLPADKMAVIAMHKLMGLLMTGNERVTIGTARVVQAACGI 320
Query: 129 GMALEQEVRIHKFLE------GNKSLQSKKTE--ADTEENLNNDKEKQRKFVNGLIKRKK 180
G A+E EVRIHKFLE G++S ++K E AD +E ++K RK V L+K++K
Sbjct: 321 GDAIENEVRIHKFLEKTKKKKGDRSNKNKAGESVADIKE-----EQKLRKKVIDLMKKQK 375
Query: 181 LKEVHVVLK-QEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHG 239
L V ++K +++ PW + K+GSRLIELL++TAY+ P +Q D PDIRPAF H
Sbjct: 376 LVAVRGLVKGKDDTKPWGAVIKTKVGSRLIELLLQTAYIQPPSDQLPDAAPDIRPAFVHS 435
Query: 240 FKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLF 299
FK ++ K + YG+IQCDPL+L GLE+ AK+ W GYDKGGHLF
Sbjct: 436 FKTVTKE-SIKASRRYGIIQCDPLILKGLERTAKNMVIPYMPMLVPPVNWTGYDKGGHLF 494
Query: 300 LPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGN 359
LPSY+MRTHG R+Q++ +K +Q++ VFEALD LG+TK R+N ++L VV+ IWA GG
Sbjct: 495 LPSYVMRTHGVRQQREAVKRAPRKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGR 554
Query: 360 VAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKD 419
+A LVD ++VPLPD+P T+D +I++WK++ + +K N ER+SQRCD ELKL+VARKMKD
Sbjct: 555 IADLVDRDDVPLPDEPDTDDEAKIKKWKWKYKSLQKENRERYSQRCDIELKLAVARKMKD 614
Query: 420 EDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYA 479
E+ FYYPHNLDFRGRAYPMHPHLNHLGSDLCRG+LEFAEGR LGKSGLRWLKIHLANLYA
Sbjct: 615 EEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRSLGKSGLRWLKIHLANLYA 674
Query: 480 GGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSS 539
GG++KLSY+GRL F ENH DIFDSAD P+ G RWWL+AEDP QCLA CI L+EALRSSS
Sbjct: 675 GGVDKLSYEGRLAFTENHFEDIFDSADKPLEGRRWWLKAEDPLQCLAVCITLTEALRSSS 734
Query: 540 PNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRR 599
P + ISH+P+HQDGSCNGLQHYAALGRD+L AAAVNLV EKPADVYS IA RV +IM+R
Sbjct: 735 PETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVTGEKPADVYSGIAARVSNIMQR 794
Query: 600 DSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDD 659
D+ KDP+ F +AL A+ L++Q+DRKLVKQTVMTSVYGVTYIGAR+QIK+RL+E+ I+DD
Sbjct: 795 DAQKDPAVFRDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERNAISDD 854
Query: 660 RLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPY 719
+ LF A+CYAAKVTL AL E+F+ ARGIMSWLGDCAKVIA ENQ V WTTPLGLPVVQPY
Sbjct: 855 KELFGASCYAAKVTLTALEEMFQGARGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPY 914
Query: 720 CKTERHLV 727
K +H++
Sbjct: 915 RKLGKHII 922
>I1Q467_ORYGL (tr|I1Q467) DNA-directed RNA polymerase OS=Oryza glaberrima PE=3
SV=1
Length = 949
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/715 (58%), Positives = 543/715 (75%), Gaps = 10/715 (1%)
Query: 16 LRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKA 75
LR+RQ++AETEAW AP LP VKSL LGWFEPL++A+ +Q+
Sbjct: 118 LRQRQVKAETEAWARAADEYRELEREMLDRRLAPALPYVKSLFLGWFEPLRDAIARDQEV 177
Query: 76 HQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQIGMALE 133
R K+ + A + LPA KVAVIVMHKMM L+M +++G V++VQAA IG A+E
Sbjct: 178 Q--RRKRVKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGVASVRVVQAAHCIGEAVE 235
Query: 134 QEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQE-E 192
+E ++ F + + KK+ + + L ++ K RK V L++R+KL E +++QE E
Sbjct: 236 REFKVQTFFQKTR----KKSAGENDLALEKEQAKCRKRVKSLVRRRKLTEAQKIVQQEIE 291
Query: 193 VSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKIL 252
+ W +Q KLG+RLIELL+++A+V SP +Q+ ++ PDIRPAF+H + Q ++
Sbjct: 292 LEEWGTESQVKLGTRLIELLLDSAFVQSPADQTPESSPDIRPAFKHVLR-QPIVENGRLK 350
Query: 253 KNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRK 312
K + VI+CDPLV G E A+H KKWKGYD GG+ FLPSYIMRTHG +
Sbjct: 351 KKHWVIECDPLVHEGFESTARHVEIPYLPMLVTPKKWKGYDTGGYFFLPSYIMRTHGVKD 410
Query: 313 QQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLP 372
Q++ +K+V +Q++KVFEALD LG+TK R+N R+ + VE+IW+ GG +AGLVD EN+PLP
Sbjct: 411 QKEAIKSVPRKQLRKVFEALDTLGSTKWRVNRRVHNAVETIWSRGGGIAGLVDKENIPLP 470
Query: 373 DKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFR 432
++P TED +IQ+WK+ ++KAKK N E H++RCDTELKLSVARKM++ED FYYPHNLDFR
Sbjct: 471 ERPETEDPDKIQKWKWSLKKAKKANRELHAERCDTELKLSVARKMREEDGFYYPHNLDFR 530
Query: 433 GRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLG 492
GRAYPMH HL+HLGSDLCRG+LE+AEGRPLGKSGLRWLKIHLAN Y GGIEKLS++ ++
Sbjct: 531 GRAYPMHAHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHEDKVA 590
Query: 493 FVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQD 552
FVEN + DIFDSA NPV+GN WW+ AEDPFQCLAAC++LS+AL+SSSP +SHLPIHQD
Sbjct: 591 FVENQLPDIFDSATNPVDGNCWWMNAEDPFQCLAACMDLSDALKSSSPQCAVSHLPIHQD 650
Query: 553 GSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNAL 612
GSCNGLQHYAALGRD + AAAVNLV +KPAD+YSEIA RV D++R DS +DP+T P A
Sbjct: 651 GSCNGLQHYAALGRDYMGAAAVNLVPGDKPADIYSEIAARVLDVVREDSMEDPATNPTAS 710
Query: 613 LAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKV 672
LA+VL+DQ+DRKLVKQTVMTSVYGVTYIGAR QI KRL+EKGLITDD+LL+ +CYA +V
Sbjct: 711 LARVLVDQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKGLITDDKLLYEVSCYATRV 770
Query: 673 TLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
TL ALG++F++ARGIM+WLGDCAK+IA EN V WT+P+GLPVVQPY K + +++
Sbjct: 771 TLDALGQMFQSARGIMAWLGDCAKMIASENHPVKWTSPVGLPVVQPYKKYKNYMI 825
>F4KB75_ARATH (tr|F4KB75) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=AT5G15700 PE=2 SV=1
Length = 1051
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/720 (59%), Positives = 532/720 (73%), Gaps = 11/720 (1%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
F L RRQ++ ETE W APNLP VKSL LGWFEPL++A+ +
Sbjct: 174 FQNLWRRQVKIETEEWERAAAEYMELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAKD 233
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMEN-EEGCVQLVQAAVQIGMA 131
Q+ + R K +A+ A +D LPA K++VI MHK+M +M + GCV++V AA +G A
Sbjct: 234 QELY--RLGKSKATYAHYLDQLPADKISVITMHKLMGHLMTGGDNGCVKVVHAACTVGDA 291
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTE-ENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQ 190
+EQE+RI FL+ K + E E +++K RK VN LIK++KL V +L+
Sbjct: 292 IEQEIRICTFLDKKKKGDDNEESGGVENETSMKEQDKLRKKVNELIKKQKLSAVRKILQS 351
Query: 191 EEVS-PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFK--PQSRSP 247
+ + PW +AK+GSRLIELL+ TAY+ SP +Q + PD+RPAF H FK S +
Sbjct: 352 HDYTKPWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFVHTFKVAKGSMNS 411
Query: 248 GQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT 307
G+K YGVI+CDPLV GLEK ++ KW GYDKG +LFL SYIM+T
Sbjct: 412 GRK----YGVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAYLFLTSYIMKT 467
Query: 308 HGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE 367
HG+++Q++ +K+ Q+Q VFEALD LG+TK R+N R+L VV+ IW+ GG VA +VD
Sbjct: 468 HGAKQQREALKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCVADMVDRS 527
Query: 368 NVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPH 427
+VPLP+KP TED +++WK+ V+ AKK+N ERHSQRCDTELKLSVARKMKDE+ FYYPH
Sbjct: 528 DVPLPEKPDTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKMKDEEAFYYPH 587
Query: 428 NLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSY 487
N+DFRGRAYPM PHLNHLGSDLCRG+LEFAEGRP+G SGLRWLKIHLANLYAGG++KLS
Sbjct: 588 NMDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPMGISGLRWLKIHLANLYAGGVDKLSL 647
Query: 488 DGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHL 547
DGRL F ENH+ DIFDSAD P+ G+RWWL+AEDPFQCLA CI+L+EALRS SP +V+SH+
Sbjct: 648 DGRLAFTENHLDDIFDSADRPLEGSRWWLQAEDPFQCLAVCISLTEALRSPSPETVLSHI 707
Query: 548 PIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPST 607
PIHQDGSCNGLQHYAALGRD L A AVNLVA EKPADVYS IA RV DIMRRD+++DP
Sbjct: 708 PIHQDGSCNGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIMRRDADRDPEV 767
Query: 608 FPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAAC 667
FP AL A+ L++Q+DRKLVKQTVMTSVYGVTYIGARDQIK+RL+E+ D++ +F AAC
Sbjct: 768 FPEALRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEKEVFGAAC 827
Query: 668 YAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
YAAKVTLAA+ E+F+AAR IM W G+CAK+IA EN+ V WTTPLGLPVVQPY + LV
Sbjct: 828 YAAKVTLAAIDEMFQAARAIMRWFGECAKIIASENETVRWTTPLGLPVVQPYHQMGTKLV 887
>R0HCL7_9BRAS (tr|R0HCL7) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10003497mg PE=4 SV=1
Length = 1014
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/720 (59%), Positives = 529/720 (73%), Gaps = 8/720 (1%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
F L RRQ++ ETE W APNLP VKSL LGWFEPL++A+ E
Sbjct: 174 FQNLWRRQVKIETEEWERAAAEYRELLTDMCERKLAPNLPYVKSLFLGWFEPLRDAIAKE 233
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMEN-EEGCVQLVQAAVQIGMA 131
Q+ + K +A+ A +D LPA +AVI MHK+M +M E GC+++VQAA +G A
Sbjct: 234 QEMYSL--GKSKATYAHYLDQLPADMIAVITMHKLMGHLMTGGENGCIKVVQAACTVGDA 291
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTE-ENLNNDKE--KQRKFVNGLIKRKKLKEVHVVL 188
+EQE+RI FL+ + + E E EN KE K RK VN LIK++KL V +L
Sbjct: 292 IEQEIRICTFLDKTRKKKGDDNEESGEVENGTAMKEQDKLRKMVNELIKKQKLSAVRKIL 351
Query: 189 KQEEVS-PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSP 247
+ + + PW +AK+GSRLIELL+ TAY+ SP NQ + PD+RPAF H FK ++
Sbjct: 352 QSHDYTKPWIADVRAKVGSRLIELLVRTAYIQSPANQQDNDMPDVRPAFVHTFKTVAKG- 410
Query: 248 GQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT 307
K + YGVI+CDPLV GLEK ++ KW GYDKG +LFL SYIM+T
Sbjct: 411 SMKSGRKYGVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAYLFLASYIMKT 470
Query: 308 HGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE 367
HG+++Q++ +K+ Q+Q VFEALD LG+TK R+N R+L VV+ IW+ GG VA LVD
Sbjct: 471 HGAKQQREAVKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCVADLVDRS 530
Query: 368 NVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPH 427
+VPLP+KP TED +++W++ + AKK+N ERHSQRCDTELKLSVARKMKDE+ FYYPH
Sbjct: 531 DVPLPEKPDTEDENILKKWRWEAKSAKKVNSERHSQRCDTELKLSVARKMKDEEGFYYPH 590
Query: 428 NLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSY 487
N+DFRGRAYPM PHLNHLGSDLCRG+LEFAEGRPLG GLRWLKIHLANLYAGG++KLS
Sbjct: 591 NIDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPLGIPGLRWLKIHLANLYAGGVDKLSL 650
Query: 488 DGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHL 547
+GRL F ENH+ DIFDSAD P+ G+RWWL+AEDPFQCLA CINL+EALRS SP +V+SH+
Sbjct: 651 EGRLAFTENHLEDIFDSADRPLEGSRWWLQAEDPFQCLAVCINLTEALRSPSPETVLSHI 710
Query: 548 PIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPST 607
PIHQDGSCNGLQHYAALGRD L A AVNLVA EKPADVYS IA RV DIMRRD+++ P
Sbjct: 711 PIHQDGSCNGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIMRRDADRGPEA 770
Query: 608 FPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAAC 667
FP+AL A+ L++Q+DRKLVKQTVMTSVYGVTYIGARDQIK+RL+E+ D++ +F AAC
Sbjct: 771 FPDALRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEKEIFGAAC 830
Query: 668 YAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
YAAKVTLAA+ E+F+AAR IM W G+CAK+IA EN+ V WTTPLGLPVVQPY + LV
Sbjct: 831 YAAKVTLAAIDEMFQAARAIMRWFGECAKIIASENETVRWTTPLGLPVVQPYHQMGTKLV 890
>Q70BU3_HORVU (tr|Q70BU3) DNA-directed RNA polymerase (Fragment) OS=Hordeum
vulgare GN=rpoTm PE=2 SV=1
Length = 862
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/720 (59%), Positives = 544/720 (75%), Gaps = 10/720 (1%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ +LR+RQI ETEAW APNLP VKSL LGWFEPL++ + AE
Sbjct: 24 YVSLRQRQIRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAE 83
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMA 131
Q+ R + AS AP + LPA +AVI MHK+M L+M +G V+++QAA QIG A
Sbjct: 84 QELVGERGTR--ASHAPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEA 141
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTE---ENLNNDKEKQRKFVNGLIKRKKLKEV-HVV 187
+E EVRIHKFLE K +K+ + E ++ +++ RK V L+K++K+++V H+V
Sbjct: 142 VEHEVRIHKFLEKTKKKNTKEVDKVVEPGDSDIAKEQQLLRKKVTDLMKKQKIRQVRHLV 201
Query: 188 LKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSP 247
KQ+ PW + A AK+GSRLIEL IETA++ P +QS D+ P+IRPAF H + +R
Sbjct: 202 KKQDSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSGDSTPEIRPAFTHEMRTVAR-- 259
Query: 248 GQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT 307
++ + YGVI+CDPLV GL++ AKH W GYDKG HLFLPSY+MRT
Sbjct: 260 -EQKSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPINWTGYDKGAHLFLPSYVMRT 318
Query: 308 HGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE 367
HG+R+Q++ +K EQMQ +FEALD LG+TK R+N R+L +V+ IW+ GG +A LVD
Sbjct: 319 HGARQQREAVKKAPKEQMQTIFEALDNLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRA 378
Query: 368 NVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPH 427
+V LP+KP TED ++++W++ +R AKK N ERHSQRCD ELKL+VARKMK+E FY+PH
Sbjct: 379 DVSLPEKPDTEDEAELKKWRWSMRSAKKENSERHSQRCDVELKLAVARKMKEEVGFYHPH 438
Query: 428 NLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSY 487
NLDFRGRAYPMHP+LNHLGSDLCRG+LEF+EGRPLG+SGLRWLKIHLANLY GG++KLSY
Sbjct: 439 NLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIHLANLYGGGVDKLSY 498
Query: 488 DGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHL 547
DGR+ F ENH+ DIFDSA+ P+ G RWWL AEDPFQCLA C++L+EALRSSSP +VISH+
Sbjct: 499 DGRIAFTENHLEDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNEALRSSSPETVISHI 558
Query: 548 PIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPST 607
P+HQDGSCNGLQHYAALGRD+L A AVNLV+ EKPADVYS IA RV +IM+RD+ KDP+
Sbjct: 559 PVHQDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARVVEIMKRDAQKDPAK 618
Query: 608 FPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAAC 667
+A A++L+DQ+DR+LVKQTVMTSVYGVTY+GAR+QIK+RL+E+G+I DD LF A+C
Sbjct: 619 DADAARARLLVDQVDRRLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIADDSELFGASC 678
Query: 668 YAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
YAAKVTL ALGE+FEAAR IM+WLGDCAKVIA EN+ V W TPLGLPVVQPY K RHL+
Sbjct: 679 YAAKVTLTALGEMFEAARSIMNWLGDCAKVIACENEPVRWKTPLGLPVVQPYRKLGRHLI 738
>B9N7P2_POPTR (tr|B9N7P2) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_746127 PE=3 SV=1
Length = 847
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/725 (59%), Positives = 541/725 (74%), Gaps = 17/725 (2%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ ALRRRQ++ E EAW APNLP +K L LGWFEPL++A+ E
Sbjct: 6 YKALRRRQVKIEAEAWEQAAKEYKELLKDMCEHKLAPNLPYMKGLFLGWFEPLRDAIAKE 65
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVM-ENEEGCVQLVQAAVQIGMA 131
Q++ R K + +P D LPA ++VI MHK+ ++VM E GC ++V AA IG A
Sbjct: 66 QES--IRRGKTRPDYSPYFDLLPADMMSVITMHKLTAMVMIGGEHGCARVVAAACMIGDA 123
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTEEN--------LNNDKEKQRKFVNGLIKRKKLKE 183
+EQE+RIH FLE + KK AD +N + N++EK RK V LIK++KL
Sbjct: 124 IEQEIRIHNFLEKTRK---KKENADNSKNSVEGESPAVMNEEEKLRKKVTDLIKKQKLPA 180
Query: 184 VHVVLK-QEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKP 242
V ++K ++ WS A+AK+GSRLIELL++TAY+ P +Q AD+PPD+RPAF H F+
Sbjct: 181 VRKIVKGHDDSKSWSTDAKAKVGSRLIELLLQTAYIQPPPDQLADSPPDLRPAFVHTFRT 240
Query: 243 QSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPS 302
S +K + YGVIQCD LVL GLE+ +H +W+GYDKG HLFLPS
Sbjct: 241 VSYE-NKKTSRKYGVIQCDSLVLKGLEQTDRHIVIPYMPMLVPPLRWRGYDKGAHLFLPS 299
Query: 303 YIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAG 362
Y+MR HG+++Q++ +K +Q+Q VFEALD LGNTK R+N R+L VV+ IW GG +A
Sbjct: 300 YVMRIHGAKQQREAVKRTPKKQLQLVFEALDTLGNTKWRVNKRVLSVVDRIWNNGGRLAD 359
Query: 363 LVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDC 422
LVD +VPLP+KP TED +++WK++V+ KK N ERHS+RCDTELK++VARKMK+E+
Sbjct: 360 LVDRSDVPLPEKPETEDEALLKKWKWKVKSVKKENRERHSRRCDTELKIAVARKMKNEEG 419
Query: 423 FYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGI 482
FYYPHNLDFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANL+A G+
Sbjct: 420 FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFACGV 479
Query: 483 EKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNS 542
+KLS++GR+ F ENH+ DIFDSAD P+ G RWWL AEDPFQCLA CINL+EALRSSSP +
Sbjct: 480 DKLSHEGRIAFTENHLDDIFDSADKPLEGKRWWLHAEDPFQCLAVCINLTEALRSSSPET 539
Query: 543 VISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSN 602
+SH+PIHQDGSCNGLQHYAALGRD+L AAAVNLVA EKP DVYS IA RV DIMR D+
Sbjct: 540 CLSHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPTDVYSGIAARVLDIMRSDAQ 599
Query: 603 KDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLL 662
+DP FP+AL A+ LI Q+DRKLVKQTVMTSVYGVTYIGARDQI++RL+E+GL TD+ +
Sbjct: 600 EDPEVFPDALRARRLISQVDRKLVKQTVMTSVYGVTYIGARDQIERRLKERGL-TDNSEI 658
Query: 663 FTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKT 722
F +CYAAKVTL ALGE+FEAAR IM+WLG+CAK+IA EN+ V WTTPLGLPVVQPY K
Sbjct: 659 FGCSCYAAKVTLTALGEMFEAARSIMNWLGECAKIIASENEPVRWTTPLGLPVVQPYRKL 718
Query: 723 ERHLV 727
+H++
Sbjct: 719 GKHVI 723
>M5XKH1_PRUPE (tr|M5XKH1) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa000780mg PE=4 SV=1
Length = 1006
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/735 (60%), Positives = 552/735 (75%), Gaps = 24/735 (3%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
++ LR+RQI+ ETEAW APNLP +KSL LGWFEPL++A+ A+
Sbjct: 152 YNLLRKRQIKLETEAWQEAAKEYQELLADMCEQKLAPNLPYIKSLFLGWFEPLRDAIAAD 211
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEG--CVQLVQAAVQIGM 130
Q + + + +Q S AP D LPA K+AVI MHK+M L+M N G V++VQAA IG
Sbjct: 212 QDSCKQPNSRQ--SHAPYFDHLPADKMAVITMHKLMGLLMTNNGGIGSVRVVQAACAIGE 269
Query: 131 ALEQEVRIHKFLEGNK-----------------SLQSKKTEADTEENLNNDKEKQRKFVN 173
A+E EVRIH+FLE K +++ +K AD +E L ++E+ RK VN
Sbjct: 270 AIEHEVRIHRFLEKTKKKKNTIDKKAEADSVPVTIEQEKL-ADEQEKLTKEQERLRKKVN 328
Query: 174 GLIKRKKLKEVHVVLK-QEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDI 232
LIKR+K+++V ++K QE++ PW + A K+G RLI+LL++TAY+ PV+Q D PPDI
Sbjct: 329 KLIKRQKMQQVRGIVKEQEDLKPWGQEAHVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDI 388
Query: 233 RPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGY 292
RPAF H K +R QK + YGVI+CDP+V G+EK A+H W GY
Sbjct: 389 RPAFVHNLKTITRD-TQKTSRRYGVIECDPIVRKGMEKTARHMVMPYMPMLVPPINWTGY 447
Query: 293 DKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVES 352
D+G +LFLPSY+MRTHG+++Q++V+K +Q++ VFEALD LG+TK R+N R+L V++
Sbjct: 448 DRGAYLFLPSYVMRTHGAKQQREVVKRTPRKQLEPVFEALDTLGSTKWRVNKRVLGVIDR 507
Query: 353 IWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLS 412
IWA GG +A LVD E+VPLP++P TED +I++WK++++ AKK N ERHSQRCD ELKL+
Sbjct: 508 IWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKLKAAKKENSERHSQRCDIELKLA 567
Query: 413 VARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKI 472
+RKMKDE+ FYYPHNLDFRGRAYPMHP+LNHLGSD+CRG+LEF+EGR LGKSGLRWLKI
Sbjct: 568 ASRKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLKI 627
Query: 473 HLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLS 532
HLANLYAGG++KLS+D R F ENH+ +IFDSAD P+ G RWWL AEDPFQCLAACINL
Sbjct: 628 HLANLYAGGVDKLSFDDRAAFTENHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINLC 687
Query: 533 EALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVR 592
EALRS SP + IS++P+HQDGSCNGLQHYAALGRD+L AAAVNLV +KPADVYS IA R
Sbjct: 688 EALRSPSPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGDKPADVYSGIAAR 747
Query: 593 VHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEE 652
V DIMR D+ KDP+T PNAL A++LI+Q+DRKLVKQTVMTSVYGVTY+GARDQIK+RL+E
Sbjct: 748 VLDIMRNDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKE 807
Query: 653 KGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLG 712
+G I DD LF AACYAA+ TL ALGE+FEAAR IMSWLG+CAKVIA ENQ V W TPLG
Sbjct: 808 RGSIADDTALFAAACYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWITPLG 867
Query: 713 LPVVQPYCKTERHLV 727
LPVVQPY + RHL+
Sbjct: 868 LPVVQPYRQLGRHLI 882
>K7L8U1_SOYBN (tr|K7L8U1) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 1015
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/723 (59%), Positives = 543/723 (75%), Gaps = 11/723 (1%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ LRRRQ++ ETE W APNLP +KSL LGWFEPL++A+ E
Sbjct: 172 YQELRRRQVKIETETWEEAAKEYRELLMDMCEHKLAPNLPYMKSLFLGWFEPLRDAIVKE 231
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEE----GCVQLVQAAVQI 128
Q+ + K + + P LPA K+AVI MHK+M L+M E G ++VQAA I
Sbjct: 232 QEMYG--EGKNRTAYVPYFVQLPADKMAVIAMHKLMGLLMTGTEHATVGTARVVQAACGI 289
Query: 129 GMALEQEVRIHKFLEGNKSLQSKKTEAD-TEENLNNDKEKQ--RKFVNGLIKRKKLKEVH 185
G A+E EVRIHKFLE K + +++ + E++ + KE+Q RK V L+K++KL V
Sbjct: 290 GDAIENEVRIHKFLEKTKKKKGDRSKKNKASESVADIKEEQKLRKKVIDLMKKQKLVAVR 349
Query: 186 VVLK-QEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQS 244
++K +++ PW A + K+GSRLIELL++TAY+ P +Q D PDIRPAF H F+ +
Sbjct: 350 GLVKGKDDTKPWGAAIKTKVGSRLIELLMQTAYIQPPPDQLLDAAPDIRPAFVHSFRTVA 409
Query: 245 RSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYI 304
+ K K YG++QCDPL+L GLE+ AK+ W GYDKGGHLFLPSY+
Sbjct: 410 KVSA-KASKRYGIVQCDPLILKGLERTAKNMVIPYMPMLVPPVNWSGYDKGGHLFLPSYV 468
Query: 305 MRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLV 364
MRTHG+R+Q++ +K +Q++ VFEALD LG+TK R+N ++L VV+ IWA GG +A LV
Sbjct: 469 MRTHGARQQREAVKRAPRKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRIADLV 528
Query: 365 DCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFY 424
D ++VPLPDKP T+D ++I++WK++ + +K N ER+SQRCD ELKL+VARKMKDE+ FY
Sbjct: 529 DRDDVPLPDKPVTDDEEKIKKWKWKCKSLQKENRERYSQRCDIELKLAVARKMKDEEGFY 588
Query: 425 YPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEK 484
YPHNLDFRGRAYPMHPHLNHLGSDLCRG+LEFAEGR LGKSGL+WLKIHLANLYAGG++K
Sbjct: 589 YPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRFLGKSGLQWLKIHLANLYAGGVDK 648
Query: 485 LSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVI 544
LS++GRL F ENH DIFDSAD P+ G RWWL+AEDP QCLA CI L+EALRSSSP + I
Sbjct: 649 LSHEGRLVFTENHFEDIFDSADKPLQGRRWWLKAEDPLQCLAVCITLTEALRSSSPETFI 708
Query: 545 SHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKD 604
SH+P+HQDGSCNGLQHYAALGRD+L AAAVNLVA EKPADVYS IA RV +IM+RD+ KD
Sbjct: 709 SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVSNIMQRDAQKD 768
Query: 605 PSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFT 664
P+ FP+AL A+ L++Q+DRKLVKQTVMTSVYGVTYIGAR+QIK+RL+E+ I+DD LF
Sbjct: 769 PAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERNAISDDTELFG 828
Query: 665 AACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTER 724
A+CYAAKVTL AL E+F+ ARGIM+WLGDCAKVIA ENQ V WTTPLGLPVVQPY K +
Sbjct: 829 ASCYAAKVTLTALEEMFQGARGIMNWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGK 888
Query: 725 HLV 727
H++
Sbjct: 889 HII 891
>R0IAI8_9BRAS (tr|R0IAI8) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10019728mg PE=4 SV=1
Length = 971
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/717 (58%), Positives = 529/717 (73%), Gaps = 8/717 (1%)
Query: 16 LRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKA 75
L++RQ++ ETE W APNLP VK L LGWFEPL+ A++A+ A
Sbjct: 134 LKQRQVKMETEEWEKAARECREILADMCEQKLAPNLPYVKFLFLGWFEPLRNAIQADLDA 193
Query: 76 HQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQIGMALE 133
+ KK + AP ++ LPA + VI MHKMM L+M N EG V+LV AA QIG A+E
Sbjct: 194 FKI--KKGKIPYAPFMEQLPADMMTVITMHKMMGLLMTNAEGVGIVKLVNAATQIGEAVE 251
Query: 134 QEVRIHKFL--EGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQ- 190
QE RIH F+ K +++KT D E + + E+ RK V L+K+KKL+EV ++K+
Sbjct: 252 QEARIHSFMLKTKKKKNETEKTSNDDSEAVAKETERMRKQVGVLMKKKKLREVKALVKKH 311
Query: 191 EEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQK 250
+ PW + AQ K+GSRLI+LL+E AY+ P Q D PPDIRPAF+ F+ + K
Sbjct: 312 DSFKPWGQEAQVKVGSRLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQTFRTVTLE-NTK 370
Query: 251 ILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGS 310
+ YG I+CD LV GL+K A+H + W GYD+G H FLPS+IMRTHG+
Sbjct: 371 TSRRYGCIECDSLVQKGLDKSARHMVIPYLPMLIPPQNWTGYDQGAHFFLPSFIMRTHGA 430
Query: 311 RKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVP 370
++Q+ V+K EQ++ VFEALD LGNTK RIN ++L +V+ IWA GG + GLVD E+VP
Sbjct: 431 KQQRMVIKQTPKEQLKPVFEALDTLGNTKWRINKKVLSLVDRIWANGGRLGGLVDREDVP 490
Query: 371 LPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLD 430
LP++P +ED + +++WK+ ++KA K N ERHSQRCD ELKL VARKMKDE+ FYYPHN+D
Sbjct: 491 LPEEPVSEDQENVKDWKWELKKANKENNERHSQRCDIELKLEVARKMKDEEGFYYPHNVD 550
Query: 431 FRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGR 490
FRGRAYPMHP+LNHLGSDLCRG+LEF EG+PLGKSGLRWLKIH+ANLYAGG++KL+Y+ R
Sbjct: 551 FRGRAYPMHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANLYAGGVDKLAYEDR 610
Query: 491 LGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIH 550
+ F E+H+ DIFD++D P+ G RWWL+AEDPFQCLAACI+LSEALRS P + ISH+PIH
Sbjct: 611 VAFTESHLEDIFDTSDRPLEGKRWWLKAEDPFQCLAACISLSEALRSPFPEAAISHIPIH 670
Query: 551 QDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPN 610
QDGSCNGLQHYAALGRD+L A AVNLV EKPADVY+EIA RV IM++D+ +DP TF N
Sbjct: 671 QDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYAEIAARVLKIMQQDAEEDPETFRN 730
Query: 611 ALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAA 670
A AK+++DQ+DRKLVKQTVMTSVYGVTY GARDQIKKRL+E+G DD L F AACYAA
Sbjct: 731 ATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGAFGDDSLTFHAACYAA 790
Query: 671 KVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
K+TL AL E+FEAAR I +W G+CAK+IA EN+AV WTTPLGLPVVQPY RHLV
Sbjct: 791 KITLKALEEMFEAARAIKTWFGECAKIIAAENKAVCWTTPLGLPVVQPYRLPGRHLV 847
>J3MGD3_ORYBR (tr|J3MGD3) DNA-directed RNA polymerase (Fragment) OS=Oryza
brachyantha GN=OB06G30770 PE=3 SV=1
Length = 845
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/711 (58%), Positives = 539/711 (75%), Gaps = 7/711 (0%)
Query: 21 IEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKAHQARS 80
++AETEAW AP LP VKSL LGWFEPL++A+ +Q+ R
Sbjct: 14 VKAETEAWARAADEYRELEREMLDRKLAPALPYVKSLFLGWFEPLRDAIARDQEVQ--RR 71
Query: 81 KKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEG--CVQLVQAAVQIGMALEQEVRI 138
K+ + A + LPA KVAVIVMHKMM L+M +++G V++VQAA IG A+E+E ++
Sbjct: 72 KRVKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGGVSVRVVQAAHCIGEAVEREFKV 131
Query: 139 HKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQE-EVSPWS 197
F + + + KTE + +E L ++ K R+ V L++R+KL E +++QE E+ W
Sbjct: 132 QTFFQKTRKKSASKTEGENDEALEKEQAKCRERVKSLVRRRKLTEAQKIVQQEIELEEWG 191
Query: 198 RAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGV 257
AQ KLG+RLIELL+++A+V SP +Q ++ PDIRPAF+H + Q ++ K + V
Sbjct: 192 TEAQVKLGTRLIELLLDSAFVQSPADQKPESSPDIRPAFKHVLR-QPIVENGRLKKKHWV 250
Query: 258 IQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVM 317
I+CDPLV G E A+H KKWKGYD GG+LFLPSYIMRTHG + Q++ +
Sbjct: 251 IECDPLVHEGFESTARHVEIPYLPMLVPPKKWKGYDSGGYLFLPSYIMRTHGVKDQKEAI 310
Query: 318 KNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPT 377
K+V +Q++KVFEALD LG+TK R+N R+ D VE+IW+ GG +AGLVD N+PLP++P +
Sbjct: 311 KSVPRKQLRKVFEALDTLGSTKWRVNRRVHDAVEAIWSRGGGIAGLVDKGNIPLPERPES 370
Query: 378 EDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYP 437
ED +IQ+WK+ ++KAKK N E H++RCDTELKLSVARKM++ED FYYPHNLDFRGRAYP
Sbjct: 371 EDPDEIQKWKWGLKKAKKTNRELHAERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYP 430
Query: 438 MHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENH 497
MHPHL+HLGSDLCRG+LE+AEGRPLGKSGLRWLKIHLAN Y GGIEKLS++G++ FVEN
Sbjct: 431 MHPHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHEGKVAFVENQ 490
Query: 498 IHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNG 557
+ DIFDSA NPV+GN WW+ AEDPFQCLAAC++LS+AL+SSSP+ +SHLPIHQDGSCNG
Sbjct: 491 LPDIFDSATNPVDGNCWWMNAEDPFQCLAACMDLSDALKSSSPHCAVSHLPIHQDGSCNG 550
Query: 558 LQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVL 617
LQHYAALGRD + A AVNLV EKPAD+YSEIA RV D++R+DS KDP+T P A LA+ +
Sbjct: 551 LQHYAALGRDYMGAVAVNLVPGEKPADIYSEIATRVLDVVRQDSMKDPATNPTASLARHI 610
Query: 618 ID-QIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAA 676
Q+DRKLVKQTVMTSVYGVTYIGAR QI KRL+EKG ITDD+LL+ +CYA +VTL A
Sbjct: 611 GSLQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKGHITDDKLLYEVSCYATRVTLDA 670
Query: 677 LGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
LG++F++ARGIM+WLGDCAK+IA ENQ V WT+P+GLPVVQPY K + +++
Sbjct: 671 LGQMFQSARGIMAWLGDCAKMIASENQPVKWTSPVGLPVVQPYKKYKNYMI 721
>Q0WWN0_ARATH (tr|Q0WWN0) DNA-directed RNA polymerase (Fragment) OS=Arabidopsis
thaliana GN=At2g24120 PE=2 SV=1
Length = 786
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/647 (64%), Positives = 506/647 (78%), Gaps = 10/647 (1%)
Query: 1 MRAEQEVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLG 60
++ E++ + FD+LRRRQ++ ETEAW APNLP VK + LG
Sbjct: 147 LKIERKDIDKRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLG 206
Query: 61 WFEPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVME-NEEGCV 119
WF+PLK+ +E EQK + +SKK +A+ AP+++ LPA K+AVIVMHKMM LVM +E+GC+
Sbjct: 207 WFQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCI 266
Query: 120 QLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQ--RKFVNGLIK 177
Q+VQAAV IG+A+EQEVRIH FL+ + K D++E L KEKQ RK VN LI+
Sbjct: 267 QVVQAAVSIGIAIEQEVRIHNFLKRTR----KNNAGDSQEEL---KEKQLLRKRVNSLIR 319
Query: 178 RKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFR 237
RK++ + V+K E PW RA QAKLGSRL+ELLIE AYV P+ QS D+ P+ RPAFR
Sbjct: 320 RKRIIDALKVVKSEGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFR 379
Query: 238 HGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGH 297
H FK ++ PG K+++ YGVI+CD L+LAGL+K AKH K+WKGYDKGG+
Sbjct: 380 HRFKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGY 439
Query: 298 LFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGG 357
LFLPSYIMRTHGS+KQQD +K++ + +VFEALD LGNTK R+N +LDVVE +WA G
Sbjct: 440 LFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADG 499
Query: 358 GNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKM 417
GN+AGLV+ E+VP+P+KP +ED +++Q WK+ RKA K+N ERHS RCD ELKLSVARKM
Sbjct: 500 GNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKM 559
Query: 418 KDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANL 477
KDE+ FYYPHNLDFRGRAYPMHPHLNHL SDLCRG LEFAEGRPLGKSGL WLKIHLANL
Sbjct: 560 KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANL 619
Query: 478 YAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRS 537
YAGG+EKLS+D RL FVENH+ DI DSA+NP++G RWWL+AEDPFQCLAAC+ L++AL+S
Sbjct: 620 YAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKS 679
Query: 538 SSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIM 597
SP SVISHLPIHQDGSCNGLQHYAALGRD EAAAVNLVA EKPADVYSEI+ RVH+IM
Sbjct: 680 PSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIM 739
Query: 598 RRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARD 644
++DS+KDP + P A LAK+LI Q+DRKLVKQTVMTSVYGVTY+GAR+
Sbjct: 740 KKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGARE 786
>A2YFP7_ORYSI (tr|A2YFP7) DNA-directed RNA polymerase OS=Oryza sativa subsp.
indica GN=OsI_23934 PE=3 SV=1
Length = 950
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/736 (57%), Positives = 547/736 (74%), Gaps = 27/736 (3%)
Query: 16 LRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKA 75
LR+RQ++AETEAW AP LP VKSL LGWFEPL++A+ +Q+
Sbjct: 94 LRQRQVKAETEAWARAADEYRELEREMLDRRLAPALPYVKSLFLGWFEPLRDAIARDQEV 153
Query: 76 HQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQIGMALE 133
R K+ + A + LPA KVAVIVMHKMM L+M +++G V++VQAA IG A+E
Sbjct: 154 Q--RRKRVKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGVASVRVVQAAHCIGEAVE 211
Query: 134 QEVRIHK--------FLEGNKSLQS-------------KKTEADTEENLNNDKEKQRKFV 172
+E R++ ++ ++S KK+ + + L ++ K RK V
Sbjct: 212 RENRLNNVEALDSLALYTTDRCVRSWNFKVQTFFQKTRKKSAGENDLALEKEQAKCRKRV 271
Query: 173 NGLIKRKKLKEVHVVLKQE-EVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPD 231
L++R+KL E +++QE E+ W +Q KLG+RLIELL+++A+V SP +Q+ ++ PD
Sbjct: 272 KSLVRRRKLTEAQKIVQQEIELEEWGTESQVKLGTRLIELLLDSAFVQSPADQTPESSPD 331
Query: 232 IRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKG 291
IRPAF+H + Q ++ K + VI+CDPLV G E A+H KKWKG
Sbjct: 332 IRPAFKHVLR-QPIVENGRLKKKHWVIECDPLVHEGFESTARHVEIPYLPMLVTPKKWKG 390
Query: 292 YDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVE 351
YD GG+LFLPSYIMRTHG + Q++ +K+V +Q++KVFEALD LG+TK R+N R+ + VE
Sbjct: 391 YDTGGYLFLPSYIMRTHGVKDQKEAIKSVPRKQLRKVFEALDTLGSTKWRVNRRVHNAVE 450
Query: 352 SIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKL 411
+IW+ GG +AGLVD EN+PLP++P TED +IQ+WK+ ++KAKK N E H++RCDTELKL
Sbjct: 451 TIWSRGGGIAGLVDKENIPLPERPETEDPDEIQKWKWSLKKAKKANRELHAERCDTELKL 510
Query: 412 SVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLK 471
SVARKM++ED FYYPHNLDFRGRAYPMH HL+HLGSDLCRG+LE+AEGRPLGKSGLRWLK
Sbjct: 511 SVARKMREEDGFYYPHNLDFRGRAYPMHAHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLK 570
Query: 472 IHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINL 531
IHLAN Y GGIEKLS++ ++ FVEN + DIFDSA NPV+GN WW+ AEDPFQCLAAC++L
Sbjct: 571 IHLANKYGGGIEKLSHEDKVAFVENQLPDIFDSATNPVDGNCWWMNAEDPFQCLAACMDL 630
Query: 532 SEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAV 591
S+AL+SSSP +SHLPIHQDGSCNGLQHYAALGRD + AAAVNLV +KPAD+YSEIA
Sbjct: 631 SDALKSSSPQCAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGDKPADIYSEIAA 690
Query: 592 RVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLE 651
RV D++R DS +DP+T P A LA+VL+DQ+DRKLVKQTVMTSVYGVTYIGAR QI KRL+
Sbjct: 691 RVLDVVREDSMEDPATNPTASLARVLVDQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQ 750
Query: 652 EKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPL 711
EKGLITDD+LL+ +CYA +VTL ALG++F++ARGIM+WLGDCAK+IA EN V WT+P+
Sbjct: 751 EKGLITDDKLLYEVSCYATRVTLDALGQMFQSARGIMAWLGDCAKMIASENYPVKWTSPV 810
Query: 712 GLPVVQPYCKTERHLV 727
GLPVVQPY K + +++
Sbjct: 811 GLPVVQPYKKYKNYMI 826
>B9FQ93_ORYSJ (tr|B9FQ93) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OsJ_22187 PE=3 SV=1
Length = 946
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/736 (57%), Positives = 547/736 (74%), Gaps = 27/736 (3%)
Query: 16 LRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKA 75
LR+RQ++AETEAW AP LP VKSL LGWFEPL++A+ +Q+
Sbjct: 90 LRQRQVKAETEAWARAADEYRELEREMLDRRLAPALPYVKSLFLGWFEPLRDAIARDQEV 149
Query: 76 HQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQIGMALE 133
R K+ + A + LPA KVAVIVMHKMM L+M +++G V++VQAA IG A+E
Sbjct: 150 Q--RRKRVKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGVASVRVVQAAHCIGEAVE 207
Query: 134 QEVRIHK--------FLEGNKSLQS-------------KKTEADTEENLNNDKEKQRKFV 172
+E R++ ++ ++S KK+ + + L ++ K RK V
Sbjct: 208 RENRLNNVEALDSLALYTTDRCVRSWNFKVQTFFQKTRKKSAGENDLALEKEQAKCRKRV 267
Query: 173 NGLIKRKKLKEVHVVLKQE-EVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPD 231
L++R+KL E +++QE E+ W +Q KLG+RLIELL+++A+V SP +Q+ ++ PD
Sbjct: 268 KSLVRRRKLTEAQKIVQQEIELEEWGTESQVKLGTRLIELLLDSAFVQSPADQTPESSPD 327
Query: 232 IRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKG 291
IRPAF+H + Q ++ K + VI+CDPLV G E A+H KKWKG
Sbjct: 328 IRPAFKHVLR-QPIVENGRLKKKHWVIECDPLVHEGFESTARHVEIPYLPMLVTPKKWKG 386
Query: 292 YDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVE 351
YD GG+LFLPSYIMRTHG + Q++ +K+V +Q++KVFEALD LG+TK R+N R+ + VE
Sbjct: 387 YDTGGYLFLPSYIMRTHGVKDQKEAIKSVPRKQLRKVFEALDTLGSTKWRVNRRVHNAVE 446
Query: 352 SIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKL 411
+IW+ GG +AGLVD EN+PLP++P TED +IQ+WK+ ++KAKK N E H++RCDTELKL
Sbjct: 447 TIWSRGGGIAGLVDKENIPLPERPETEDPDEIQKWKWSLKKAKKANRELHAERCDTELKL 506
Query: 412 SVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLK 471
SVARKM++ED FYYPHNLDFRGRAYPMH HL+HLGSDLCRG+LE+AEGRPLGKSGLRWLK
Sbjct: 507 SVARKMREEDGFYYPHNLDFRGRAYPMHAHLSHLGSDLCRGVLEYAEGRPLGKSGLRWLK 566
Query: 472 IHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINL 531
IHLAN Y GGIEKLS++ ++ FVEN + DIFDSA NPV+GN WW+ AEDPFQCLAAC++L
Sbjct: 567 IHLANKYGGGIEKLSHEDKVAFVENQLPDIFDSATNPVDGNCWWMNAEDPFQCLAACMDL 626
Query: 532 SEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAV 591
S+AL+SSSP +SHLPIHQDGSCNGLQHYAALGRD + AAAVNLV +KPAD+YSEIA
Sbjct: 627 SDALKSSSPQCAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGDKPADIYSEIAA 686
Query: 592 RVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLE 651
RV D++R DS +DP+T P A LA+VL+DQ+DRKLVKQTVMTSVYGVTYIGAR QI KRL+
Sbjct: 687 RVLDVVREDSMEDPATNPTASLARVLVDQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQ 746
Query: 652 EKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPL 711
EKGLITDD+LL+ +CYA +VTL ALG++F++ARGIM+WLGDCAK+IA EN V WT+P+
Sbjct: 747 EKGLITDDKLLYEVSCYATRVTLDALGQMFQSARGIMAWLGDCAKMIASENHPVKWTSPV 806
Query: 712 GLPVVQPYCKTERHLV 727
GLPVVQPY K + +++
Sbjct: 807 GLPVVQPYKKYKNYMI 822
>O82725_MAIZE (tr|O82725) DNA-directed RNA polymerase OS=Zea mays GN=RpoT PE=3
SV=1
Length = 952
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/710 (59%), Positives = 536/710 (75%), Gaps = 9/710 (1%)
Query: 21 IEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKAHQARS 80
++AETEAW AP LP VK+L +GWFEPL++A+ +Q R
Sbjct: 125 VKAETEAWARAAEEYREIEREMLDRRLAPALPYVKALFVGWFEPLRDAIARDQDVQ--RR 182
Query: 81 KKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQIGMALEQEVRI 138
K+ + A + LPA KVAVIVMHKMM L+M +++G V++VQAA IG A+E+E ++
Sbjct: 183 KRVKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGTGSVRVVQAAHCIGEAVEREFKV 242
Query: 139 HKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQE-EVSPWS 197
F + ++ KK + + + L ++ K RK V L+KR+K+ E +++QE E+ W
Sbjct: 243 QSFFQKSRK---KKIQGENDPALEKEQAKCRKRVKSLVKRRKMSEAQRLVQQELELEEWG 299
Query: 198 RAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGV 257
AQ KLGSRLIELL+++A+V P +Q+ D+ PDIRPAF+H + Q ++ K + V
Sbjct: 300 TEAQVKLGSRLIELLLDSAFVQPPADQTPDSSPDIRPAFKHVLR-QPIIENGRLKKKHWV 358
Query: 258 IQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVM 317
I+CD LV G E A+H KKWKGYDKGGHLFLPSYIMRTHG + Q+D +
Sbjct: 359 IECDHLVHEGFESTARHVDIPYLPMLVPPKKWKGYDKGGHLFLPSYIMRTHGVKDQKDAI 418
Query: 318 KNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPT 377
+V +Q++KVFEALDILG+TK R+N R+ DVVE+IW+ GG +AGLVD N+PLP++P +
Sbjct: 419 NSVPRKQLRKVFEALDILGSTKWRVNRRVHDVVETIWSQGGGIAGLVDKANIPLPERPES 478
Query: 378 EDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYP 437
ED ++Q+WK+ ++KAKK N E H++RCDTELKLSVARKM++ED FYYPHNLDFRGRAYP
Sbjct: 479 EDPDEMQKWKWSLKKAKKTNRELHAERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYP 538
Query: 438 MHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENH 497
MHPHL+HLGSDLCRG+LE+AEGRPLGKSGL WLKIHLAN Y GGIEKLS++G+L FVEN
Sbjct: 539 MHPHLSHLGSDLCRGVLEYAEGRPLGKSGLCWLKIHLANKYGGGIEKLSHEGKLAFVENQ 598
Query: 498 IHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNG 557
+ DIFDSA NPV+GN WW AEDPFQCLAAC++LS+ALRS SP +SHLPIHQDGSCNG
Sbjct: 599 LFDIFDSAANPVDGNCWWTNAEDPFQCLAACMDLSDALRSPSPYHAVSHLPIHQDGSCNG 658
Query: 558 LQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVL 617
LQHYAALGRD + A AVNLV EKPAD+YSEIA RV +++ DS KDP+T P A LA+VL
Sbjct: 659 LQHYAALGRDYMGAVAVNLVPGEKPADIYSEIASRVLNVVCEDSMKDPATNPTASLARVL 718
Query: 618 IDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAAL 677
+DQ+DRKLVKQTVMTSVYGVTYIGAR QI KRL+EKGLITDD+LL+ +CYA +VTL AL
Sbjct: 719 VDQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKGLITDDKLLYDVSCYATRVTLDAL 778
Query: 678 GEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
G++F++ARGIM+WLGDCAK+IA +NQ V WT+P+GLPVVQPY K + +++
Sbjct: 779 GQMFQSARGIMAWLGDCAKMIASKNQPVKWTSPVGLPVVQPYKKYKNYMI 828
>Q9SYW4_MAIZE (tr|Q9SYW4) DNA-directed RNA polymerase OS=Zea mays GN=rpoT2 PE=2
SV=1
Length = 952
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/710 (59%), Positives = 535/710 (75%), Gaps = 9/710 (1%)
Query: 21 IEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKAHQARS 80
++AETEAW AP LP VK+L +GWFEPL++A+ +Q R
Sbjct: 125 VKAETEAWARAAEEYREIEREMLDRRLAPALPYVKALFVGWFEPLRDAIARDQDVQ--RR 182
Query: 81 KKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQIGMALEQEVRI 138
K+ + A + LPA KVAVIVMHKMM L+M +++G V++VQAA IG A+E+E ++
Sbjct: 183 KRVKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGTGSVRVVQAAHCIGEAVEREFKV 242
Query: 139 HKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQE-EVSPWS 197
F + ++ KK + + + L ++ K RK V L+KR+K+ E +++QE E+ W
Sbjct: 243 QSFFQKSRK---KKIQGENDPALEKEQAKCRKRVKSLVKRRKMSEAQRLVQQELELEEWG 299
Query: 198 RAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGV 257
AQ KLGSRLIELL+++A+V P +Q+ D+ PDIRPAF+H + Q ++ K + V
Sbjct: 300 TEAQVKLGSRLIELLLDSAFVQPPADQTPDSSPDIRPAFKHVLR-QPIIENGRLKKKHWV 358
Query: 258 IQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVM 317
I+CD LV G E A+H KKWKGYDKGGHLFLPSYIMRTHG + Q+D +
Sbjct: 359 IECDHLVHEGFESTARHVDIPYLPMLVPPKKWKGYDKGGHLFLPSYIMRTHGVKDQKDAI 418
Query: 318 KNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPT 377
+V +Q++KVFEALDILG+TK R+N R+ DVVE+IW+ GG +AGLVD N+PLP++P +
Sbjct: 419 NSVPRKQLRKVFEALDILGSTKWRVNRRVHDVVETIWSQGGGIAGLVDKANIPLPERPES 478
Query: 378 EDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYP 437
ED ++Q+WK+ ++KAKK N E H++RCDTELKLSVARKM++ED FYYPHNLDFRGRAYP
Sbjct: 479 EDPDEMQKWKWSLKKAKKTNRELHAERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYP 538
Query: 438 MHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENH 497
MHPHL+HLGSDLCRG+LE+AEGRPLGKSGL WLKIHLAN Y GGIEKLS++G+L FVEN
Sbjct: 539 MHPHLSHLGSDLCRGVLEYAEGRPLGKSGLCWLKIHLANKYGGGIEKLSHEGKLAFVENQ 598
Query: 498 IHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNG 557
+ DIFDSA NPV+GN WW AEDPFQCLAAC++LS+ALRS SP +SHLPIHQDGSCNG
Sbjct: 599 LFDIFDSAANPVDGNCWWTNAEDPFQCLAACMDLSDALRSPSPYHAVSHLPIHQDGSCNG 658
Query: 558 LQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVL 617
LQHYAALGRD + A AVNLV EKPAD+YSEIA RV +++ DS KDP+T P A LA+ L
Sbjct: 659 LQHYAALGRDYMGAVAVNLVPGEKPADIYSEIASRVLNVVCEDSMKDPATNPTASLARAL 718
Query: 618 IDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAAL 677
+DQ+DRKLVKQTVMTSVYGVTYIGAR QI KRL+EKGLITDD+LL+ +CYA +VTL AL
Sbjct: 719 VDQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKGLITDDKLLYDVSCYATRVTLDAL 778
Query: 678 GEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
G++F++ARGIM+WLGDCAK+IA +NQ V WT+P+GLPVVQPY K + +++
Sbjct: 779 GQMFQSARGIMAWLGDCAKMIASKNQPVKWTSPVGLPVVQPYKKYKNYMI 828
>Q67UP6_ORYSJ (tr|Q67UP6) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=P0453H04.42 PE=2 SV=1
Length = 806
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/683 (60%), Positives = 531/683 (77%), Gaps = 10/683 (1%)
Query: 48 APNLPRVKSLLLGWFEPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKM 107
AP LP VKSL LGWFEPL++A+ +Q+ R K+ + A + LPA KVAVIVMHKM
Sbjct: 7 APALPYVKSLFLGWFEPLRDAIARDQEVQ--RRKRVKHVYAKYLLLLPADKVAVIVMHKM 64
Query: 108 MSLVMENEEGC--VQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDK 165
M L+M +++G V++VQAA IG A+E+E ++ F + + KK+ + + L ++
Sbjct: 65 MGLLMSSKDGVASVRVVQAAHCIGEAVEREFKVQTFFQKTR----KKSAGENDLALEKEQ 120
Query: 166 EKQRKFVNGLIKRKKLKEVHVVLKQE-EVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQ 224
K RK V L++R+KL E +++QE E+ W +Q KLG+RLIELL+++A+V SP +Q
Sbjct: 121 AKCRKRVKSLVRRRKLTEAQKIVQQEIELEEWGTESQVKLGTRLIELLLDSAFVQSPADQ 180
Query: 225 SADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXX 284
+ ++ PDIRPAF+H + Q ++ K + VI+CDPLV G E A+H
Sbjct: 181 TPESSPDIRPAFKHVLR-QPIVENGRLKKKHWVIECDPLVHEGFESTARHVEIPYLPMLV 239
Query: 285 XXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRING 344
KKWKGYD GG+LFLPSYIMRTHG + Q++ +K+V +Q++KVFEALD LG+TK R+N
Sbjct: 240 TPKKWKGYDTGGYLFLPSYIMRTHGVKDQKEAIKSVPRKQLRKVFEALDTLGSTKWRVNR 299
Query: 345 RLLDVVESIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQR 404
R+ + VE+IW+ GG +AGLVD EN+PLP++P TED +IQ+WK+ ++KAKK N E H++R
Sbjct: 300 RVHNAVETIWSRGGGIAGLVDKENIPLPERPETEDPDEIQKWKWSLKKAKKANRELHAER 359
Query: 405 CDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGK 464
CDTELKLSVARKM++ED FYYPHNLDFRGRAYPMH HL+HLGSDLCRG+LE+AEGRPLGK
Sbjct: 360 CDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHAHLSHLGSDLCRGVLEYAEGRPLGK 419
Query: 465 SGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQC 524
SGLRWLKIHLAN Y GGIEKLS++ ++ FVEN + DIFDSA NPV+GN WW+ AEDPFQC
Sbjct: 420 SGLRWLKIHLANKYGGGIEKLSHEDKVAFVENQLPDIFDSATNPVDGNCWWMNAEDPFQC 479
Query: 525 LAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPAD 584
LAAC++LS+AL+SSSP +SHLPIHQDGSCNGLQHYAALGRD + AAAVNLV +KPAD
Sbjct: 480 LAACMDLSDALKSSSPQCAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGDKPAD 539
Query: 585 VYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARD 644
+YSEIA RV D++R DS +DP+T P A LA+VL+DQ+DRKLVKQTVMTSVYGVTYIGAR
Sbjct: 540 IYSEIAARVLDVVREDSMEDPATNPTASLARVLVDQVDRKLVKQTVMTSVYGVTYIGARQ 599
Query: 645 QIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQA 704
QI KRL+EKGLITDD+LL+ +CYA +VTL ALG++F++ARGIM+WLGDCAK+IA EN
Sbjct: 600 QITKRLQEKGLITDDKLLYEVSCYATRVTLDALGQMFQSARGIMAWLGDCAKMIASENHP 659
Query: 705 VHWTTPLGLPVVQPYCKTERHLV 727
V WT+P+GLPVVQPY K + +++
Sbjct: 660 VKWTSPVGLPVVQPYKKYKNYMI 682
>Q52GZ4_SPIOL (tr|Q52GZ4) DNA-directed RNA polymerase OS=Spinacia oleracea
GN=rpoT2 PE=2 SV=1
Length = 1036
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/725 (57%), Positives = 530/725 (73%), Gaps = 18/725 (2%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ LR RQI+ ETE+W APNLP VKSL LGWFEP ++++ +
Sbjct: 196 YQKLRNRQIKLETESWQQAANEYKELLADMCKLKLAPNLPYVKSLFLGWFEPFRDSIIED 255
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMA 131
Q+ R K + + D LPA +A+I MHK+M ++M G V++VQAA +G A
Sbjct: 256 QEL--IRQGKCRGAYGTYFDQLPADMMAIITMHKLMGMLMTGSGHGSVKVVQAACALGEA 313
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQ-----RKFVNGLIKRKKLKE-VH 185
+EQEVRIH FLE K+ + K + ++ +D E Q RK VN LIK++K ++ +
Sbjct: 314 IEQEVRIHTFLE--KAKKKKGDRSKKPDDAASDAEIQEQQHLRKNVNNLIKKQKRRQALK 371
Query: 186 VVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFK---P 242
+V Q ++ PW +AK+GSRLIELLI+TAY+ P +QSA PPD+RPAF H K P
Sbjct: 372 IVDSQGDLKPWGSETRAKVGSRLIELLIQTAYIQPPASQSACDPPDLRPAFVHSLKSVGP 431
Query: 243 QSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPS 302
+++ G++ +G+I+CDPL++ GLEK +H +KW GYDKG +L L S
Sbjct: 432 ENKKTGRR----FGMIECDPLIIKGLEKTPRHIVIPYMPMLVPPEKWTGYDKGAYLVLRS 487
Query: 303 YIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAG 362
++MRTHGS+ Q+ ++ EQ++ VFEALD LGNTK R+N ++L +V+ +WA GG +A
Sbjct: 488 FVMRTHGSKHQRVAVRRASEEQLKSVFEALDTLGNTKWRVNKKVLSIVDRVWANGGRLAD 547
Query: 363 LVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDC 422
LVD ++VPLP+KP TED +++ WK++VR KK N ERHSQRCD ELKL+VARKMKDE+
Sbjct: 548 LVDRDDVPLPEKPDTEDESELKRWKWKVRSLKKENRERHSQRCDVELKLAVARKMKDEEG 607
Query: 423 FYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGI 482
F+YPHN+DFRGRAYPMHP+LNHLGSD+CRG+LEFAEGR +GKSGLRWLKIH+ANLYAGGI
Sbjct: 608 FFYPHNVDFRGRAYPMHPYLNHLGSDMCRGILEFAEGRAVGKSGLRWLKIHVANLYAGGI 667
Query: 483 EKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNS 542
+KLS +GR+ F ENH+ DIFDS D P+ G WWL+AEDPFQCLA CI L+EALRS+ P +
Sbjct: 668 DKLSLEGRIAFTENHLDDIFDSVDKPLEGRCWWLKAEDPFQCLAVCIELAEALRSTRPEA 727
Query: 543 VISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSN 602
SH+P+HQDGSCNGLQHYAALGRDEL A AVNLVA EKPADVYS IA RV IM D+
Sbjct: 728 FKSHIPVHQDGSCNGLQHYAALGRDELGATAVNLVAGEKPADVYSGIASRVLSIMEADAK 787
Query: 603 KDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLL 662
KDP+ FP+ +LA+ LI+Q+DRKLVKQTVMTSVYGVTYIGAR+QIK+RL+E+ +DD +
Sbjct: 788 KDPTDFPDTVLARKLINQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERAAFSDDTEI 847
Query: 663 FTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKT 722
+ AACY A++TL ALGE+F+AAR IMSWLGDCAK+IA ENQ V W TPLGLPVVQPYCK
Sbjct: 848 YGAACYVARITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWITPLGLPVVQPYCKK 907
Query: 723 ERHLV 727
RHL+
Sbjct: 908 GRHLI 912
>P93661_CHEAL (tr|P93661) DNA-directed RNA polymerase OS=Chenopodium album PE=2
SV=1
Length = 988
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/721 (58%), Positives = 527/721 (73%), Gaps = 7/721 (0%)
Query: 10 AETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAV 69
A ++ LR+RQI+ ETEAW APNLP +KSL LGWFEPLK+A+
Sbjct: 148 AGRYNVLRKRQIKVETEAWNEAAREYQELLADMCEQKLAPNLPYMKSLFLGWFEPLKDAI 207
Query: 70 EAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQI 128
+A Q+A + + + D LPA +AVI MHK+M L+M G ++QAA QI
Sbjct: 208 KAHQEA--CKVGRNRPLYGECFDELPADMMAVITMHKLMGLLMTGSGNGGTTVIQAATQI 265
Query: 129 GMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEV-HVV 187
G A+EQE +I KFLE KS + T + E++ +++ K V L+K++K+ +V +V
Sbjct: 266 GEAVEQEAKIRKFLE--KSKKKPATNNNDEDDSAKAQQRLAKKVTTLMKKQKISQVREIV 323
Query: 188 LKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSP 247
Q++ PWS+ Q K+G +LI+LL ETAY+ P +Q AD PPDIRPAF H K +
Sbjct: 324 RGQDDSKPWSQDNQVKVGCKLIQLLAETAYIQPPADQLADGPPDIRPAFIHTQKTVCKES 383
Query: 248 GQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT 307
+ + + YGVI+CDPLV GLEK A+H W GYDKG +L+LPSYIMRT
Sbjct: 384 QKGLRRRYGVIECDPLVRRGLEKTARHMVIPYMPMLIPPLNWTGYDKGAYLYLPSYIMRT 443
Query: 308 HGSRKQQDVMKNV-KGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC 366
HG ++Q+D +K V + + VFEALD LGNTK R+N ++L +++ IWA GG +A LVD
Sbjct: 444 HGVKQQRDAIKRVARDNNLCTVFEALDTLGNTKWRVNKKVLSIIDRIWASGGCLADLVDR 503
Query: 367 ENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYP 426
E++PLP +P T+D ++I++WK++V+ KK N ERHSQRCDTELKL+VARKMKDE+ FYYP
Sbjct: 504 EDMPLPGEPDTDDAEEIKKWKWKVKHVKKDNAERHSQRCDTELKLAVARKMKDEEGFYYP 563
Query: 427 HNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLS 486
HNLDFRGRAYPMHPHLNHLGSDLCRG+LEFAEGRPLGKSGL WLK+H+ANLYAGG++KLS
Sbjct: 564 HNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLNWLKVHVANLYAGGVDKLS 623
Query: 487 YDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISH 546
Y+GR+ F EN + D+FDSAD P+ G RWWL AEDPFQCLAACINL++ALRSSSP +SH
Sbjct: 624 YEGRVAFTENRLDDVFDSADRPLEGRRWWLTAEDPFQCLAACINLTDALRSSSPEDYLSH 683
Query: 547 LPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPS 606
+PIHQDGSCNGLQHYAALGRD+L A AVNLVA KPADVYS IA RV +IMR D+ KDPS
Sbjct: 684 IPIHQDGSCNGLQHYAALGRDKLGAEAVNLVAGGKPADVYSGIAARVFEIMRGDAEKDPS 743
Query: 607 TFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAA 666
PNA AK+L++Q+DRKLVKQTVMTSVYGVTYIG RDQIK+RL+E+ I DD LF A+
Sbjct: 744 IEPNAFHAKLLLNQVDRKLVKQTVMTSVYGVTYIGVRDQIKRRLKERDAIVDDNDLFAAS 803
Query: 667 CYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHL 726
CYAAK T+ AL E+FEAAR IM WLGDCAK+IA ENQ W+TPLGLPVVQPY R L
Sbjct: 804 CYAAKTTMTALEEMFEAARSIMGWLGDCAKIIASENQPARWSTPLGLPVVQPYRNHGRRL 863
Query: 727 V 727
V
Sbjct: 864 V 864
>M4CJH0_BRARP (tr|M4CJH0) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra004354 PE=3 SV=1
Length = 971
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/731 (55%), Positives = 532/731 (72%), Gaps = 21/731 (2%)
Query: 10 AETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAV 69
A+ + +L++RQ++ ETE W APNLP VKSL LGWFEPL++A+
Sbjct: 125 AQKYYSLKQRQVKLETEEWEKAAKECQEIIEDMCEQKLAPNLPYVKSLFLGWFEPLRDAI 184
Query: 70 EAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQ 127
+A+ + KK + A ++ LPA +AVI MHKMM L+M N EG V++V AA Q
Sbjct: 185 QADLDGFKV--KKGKIPYASYMEQLPADMMAVITMHKMMGLLMTNAEGVGVVKVVNAATQ 242
Query: 128 IGMALEQEVRIHKFLEGNKSLQS----------KKTEADTEENLNNDKEKQRKFVNGLIK 177
IG A+EQE RI+ F++ K ++ E DT+E L K +K +N L+K
Sbjct: 243 IGEAIEQEARINSFMKKAKKKKNVVDDESEGVDASGEIDTKETL-----KLKKQINTLLK 297
Query: 178 RKKLKEVHVVLK-QEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAF 236
+ K+++V ++K + W + AQ K+G+RLI+LL+ETAY+ P Q D PP+IRPAF
Sbjct: 298 KHKVRQVRGIVKAHDSFKSWGQEAQVKVGARLIQLLMETAYIQPPAEQFDDGPPEIRPAF 357
Query: 237 RHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGG 296
+ + + +K+ + YG I+CDPL+ GL+K A+H + W GYD+G
Sbjct: 358 KQSSRTVTIE-NKKLSRKYGCIECDPLIRKGLDKSARHMVIPYLPMLIPPQNWTGYDQGA 416
Query: 297 HLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAG 356
H FLPSYIMRTHG+++Q+ +K Q++ VF+ALD LGNTK RIN ++L +V+ IWA
Sbjct: 417 HFFLPSYIMRTHGAKQQRVAIKRTPKAQLEPVFQALDTLGNTKWRINKKVLSLVDRIWAN 476
Query: 357 GGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARK 416
GG V GLVD ++ P+P++P +ED ++I++WK+++++A K N ERHSQRCD ELKL VARK
Sbjct: 477 GGRVGGLVDRDDAPIPEEPDSEDQEEIKQWKWKMKEANKENSERHSQRCDVELKLEVARK 536
Query: 417 MKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLAN 476
MKDE+ FY+PHN+DFRGRAYPMHP+LNHLGSDLCRG+LEF EG+PLG+SGLRWLKIH+AN
Sbjct: 537 MKDEEGFYFPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFCEGKPLGESGLRWLKIHIAN 596
Query: 477 LYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALR 536
LY GG++K +Y R+ F E+H+ DIFDS+D P+ G RW L AEDPFQCLAAC+NLSEALR
Sbjct: 597 LYGGGVDKFAYKDRVAFTESHLEDIFDSSDRPLEGKRWRLNAEDPFQCLAACMNLSEALR 656
Query: 537 SSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDI 596
S P + ISH+PIHQDGSCNGLQHYAALGRD++ AAAVNL EKPADVY++IA RV +I
Sbjct: 657 SPFPEAAISHIPIHQDGSCNGLQHYAALGRDQIGAAAVNLFTGEKPADVYADIAARVLNI 716
Query: 597 MRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLI 656
MR+D+ +DP TFPNA AK+++DQ+DRKLVKQTVMTSVYGVTY GARDQIKKRL+E+G
Sbjct: 717 MRQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGAF 776
Query: 657 TDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVV 716
DD F A+CYAA+VTL AL E+FEAAR IMSW G+CAK+IA +N+AV WTTPLGLPVV
Sbjct: 777 ADDSQNFHASCYAARVTLKALEEMFEAARAIMSWFGECAKIIASQNKAVCWTTPLGLPVV 836
Query: 717 QPYCKTERHLV 727
QPY K ERHLV
Sbjct: 837 QPYRKNERHLV 847
>B4YPU8_BRAOA (tr|B4YPU8) DNA-directed RNA polymerase OS=Brassica oleracea var.
alboglabra GN=BoB028L01.020 PE=3 SV=1
Length = 951
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/731 (55%), Positives = 530/731 (72%), Gaps = 21/731 (2%)
Query: 10 AETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAV 69
A+ + +L++RQ++ ETE W APNLP VKSL LGWFEPL++A+
Sbjct: 121 AQKYYSLKQRQVKLETEEWEKAAKECQEIIEDMCEQKLAPNLPYVKSLFLGWFEPLRDAI 180
Query: 70 EAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQ 127
+A+ + KK + A ++ LPA +AVI MHKMM L+M N EG V++V AA Q
Sbjct: 181 QADLDGFKV--KKGKIPYASYMEQLPADMMAVITMHKMMGLLMTNAEGVGVVKVVNAATQ 238
Query: 128 IGMALEQEVRIHKFL----------EGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIK 177
IG A+EQE RI F+ + + E +T+E L K +K +N L+K
Sbjct: 239 IGEAIEQEARITSFMKKAKKKKNVVDDESEAVNASGEVETKETL-----KLKKQINTLLK 293
Query: 178 RKKLKEVHVVLK-QEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAF 236
+ K+++V ++K + W + AQ K+G+RLI+LL+ETAY+ P Q D PP+IRPAF
Sbjct: 294 KHKVRQVREIVKAHDSFKSWGQEAQVKVGARLIQLLMETAYIQPPAEQFDDGPPEIRPAF 353
Query: 237 RHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGG 296
+ + + +K+ + YG I+CDPL+ GL+K A+H + W GYD+G
Sbjct: 354 KQSSRIVTIE-NKKLSRKYGCIECDPLIRKGLDKSARHMVIPYLPMLIPPQNWTGYDQGA 412
Query: 297 HLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAG 356
H FLPSYIMRTHG+++Q+ +K Q++ VF+ L+ LGNTK RIN ++L +V+ IWA
Sbjct: 413 HFFLPSYIMRTHGAKQQRIAIKRTPKAQLEPVFQGLNTLGNTKWRINKKVLSLVDRIWAN 472
Query: 357 GGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARK 416
GG V GLVD ++VP+P++P +ED ++I++WK+++++A K N ERHSQRCD ELKL VARK
Sbjct: 473 GGRVGGLVDRDDVPIPEEPDSEDQEEIKQWKWKMKEANKENSERHSQRCDVELKLEVARK 532
Query: 417 MKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLAN 476
MKDE+ FY+PHN+DFRGRAYPMHP+LNHLGSDLCRG+LEF EG+PLG+SGLRWLKIH+AN
Sbjct: 533 MKDEEGFYFPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFCEGKPLGESGLRWLKIHIAN 592
Query: 477 LYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALR 536
LY GG++K +Y R+ F E+H+ DIFDS+D P+ G RWWL AEDPFQCLAAC+NLSEALR
Sbjct: 593 LYGGGVDKFAYKDRVAFAESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACMNLSEALR 652
Query: 537 SSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDI 596
S P + +SH+PIHQDGSCNGLQHYAALGRD++ AAAVNL EKPADVY++IA RV +I
Sbjct: 653 SPFPEAAVSHIPIHQDGSCNGLQHYAALGRDQIGAAAVNLFTGEKPADVYADIAARVLNI 712
Query: 597 MRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLI 656
MR+D+ +DP TFPNA AK+++DQ+DRKLVKQTVMTSVYGVTY GARDQIKKRL+E+G
Sbjct: 713 MRQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGAF 772
Query: 657 TDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVV 716
DD F A+CYAA+VTL AL E+FEAAR IMSW G+CAK+IA +N+AV WTTPLGLPVV
Sbjct: 773 ADDSQNFHASCYAARVTLKALEEMFEAARAIMSWFGECAKIIASQNKAVCWTTPLGLPVV 832
Query: 717 QPYCKTERHLV 727
QPY K ERHLV
Sbjct: 833 QPYRKNERHLV 843
>C5Z749_SORBI (tr|C5Z749) DNA-directed RNA polymerase OS=Sorghum bicolor
GN=Sb10g025820 PE=3 SV=1
Length = 960
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/716 (58%), Positives = 534/716 (74%), Gaps = 10/716 (1%)
Query: 16 LRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKA 75
LR+RQ++AETEAW AP LP VKSL +GWFEPL++A+ +Q
Sbjct: 127 LRQRQVKAETEAWARAAEEYREIEREMLDRRLAPALPYVKSLFVGWFEPLRDAIARDQDV 186
Query: 76 HQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQIGMALE 133
R K+ + A + LPA KVAVIVMHKMM L+M +++G V++VQAA IG A+E
Sbjct: 187 Q--RRKRVKHVYAKYLLLLPADKVAVIVMHKMMGLLMSSKDGTGSVRVVQAAHCIGEAVE 244
Query: 134 QEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQE-E 192
+E ++ F + ++ KK + + + L ++ K RK V L+KR+K+ E +++QE E
Sbjct: 245 REFKVQSFFQKSRK---KKDQGENDPALEKEQAKCRKRVKTLVKRRKMSEAQKLVQQELE 301
Query: 193 VSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKIL 252
+ W AQ KLGSRLIELL+++A+V P +Q D+ PDIRPAF+H + Q ++
Sbjct: 302 LEEWGTEAQVKLGSRLIELLLDSAFVQPPADQIPDSSPDIRPAFKHVLR-QPIIENGRLK 360
Query: 253 KNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRK 312
K + VI+CD LV G E A+H KKWKGY+KGGHLFLPSYIMRTHG +
Sbjct: 361 KKHWVIECDHLVHDGFESTARHVDIPYLPMLVPPKKWKGYNKGGHLFLPSYIMRTHGVKD 420
Query: 313 QQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLP 372
Q+D + +V +Q++KVFEALDILG+TK R+N R+ DVVE+IW+ GG +AGLVD N+PLP
Sbjct: 421 QKDAINSVPRKQLRKVFEALDILGSTKWRVNRRVHDVVETIWSRGGGIAGLVDKANIPLP 480
Query: 373 DKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFR 432
++P +ED ++Q+WK+ ++KAKK N E H++RCDTELKLSVARKM++ED FYYPHNLDFR
Sbjct: 481 ERPESEDPDEMQKWKWSLKKAKKTNRELHAERCDTELKLSVARKMREEDGFYYPHNLDFR 540
Query: 433 GRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLG 492
GRAYPMHPHL+HLGSDLCRG+LE+AEGRPLGKSGL WLKIHLAN Y GG+EKLS++G+L
Sbjct: 541 GRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKSGLCWLKIHLANKYGGGVEKLSHEGKLA 600
Query: 493 FVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQD 552
FVEN + DIFDSA NPV+GN WW AEDPFQCLAAC++LS+AL S SP +SHLPIHQD
Sbjct: 601 FVENQLLDIFDSAANPVDGNCWWTNAEDPFQCLAACMDLSDALNSPSPYRTVSHLPIHQD 660
Query: 553 GSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNAL 612
GSCNGLQHYAALGRD + A AVNLV EKPAD+YSEIA RV +++R DS KDP+T P A
Sbjct: 661 GSCNGLQHYAALGRDYMGAVAVNLVPGEKPADIYSEIAARVLNVVREDSMKDPATNPTAS 720
Query: 613 LAKVLID-QIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAK 671
L + Q+DRKLVKQTVMTSVYGVTYIGAR QI KRL+EKGLI DD+LL+ +CYA +
Sbjct: 721 LDMGIGSLQVDRKLVKQTVMTSVYGVTYIGARQQITKRLQEKGLIADDKLLYDVSCYATR 780
Query: 672 VTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
VTL ALG++F++ARGIM+WLGDCAK+IA +NQ V WT+P+GLPVVQPY K + +++
Sbjct: 781 VTLDALGQMFQSARGIMAWLGDCAKMIASKNQPVKWTSPVGLPVVQPYKKYKNYMI 836
>Q1KUU5_9ROSI (tr|Q1KUU5) Putative uncharacterized protein OS=Cleome spinosa PE=4
SV=1
Length = 1021
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/724 (57%), Positives = 519/724 (71%), Gaps = 34/724 (4%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ +L+RRQ++ ETEAW APNLP VKSL LGWFEPL+EA+ +
Sbjct: 189 YQSLKRRQVKIETEAWEKAANEYKELLTDMCEQKLAPNLPYVKSLFLGWFEPLREAIAKD 248
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMEN-EEGCVQLVQAAVQIGMA 131
Q+ + R K +A+ A +D LPA +AVI MHK+M L+M + GCV+++ AA +G A
Sbjct: 249 QELY--RLGKNRANYAYYIDQLPADMIAVITMHKLMGLLMTGGDNGCVKVIMAACTVGDA 306
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQ-------RKFVNGLIKRKKLKEV 184
+EQE+RI +FLE K KK E +E N +KE ++ V+ LIK++KL V
Sbjct: 307 IEQEIRICRFLEKTK----KKKENISEGVENVEKETTVKEEDWLKRKVSELIKKQKLPAV 362
Query: 185 HVVLKQEEVS-PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQ 243
+L + S PWS +AK+GSRLIEL ++TAY+ P NQ D PPDIRPAF H FK
Sbjct: 363 RQILNSHDASKPWSTDVRAKVGSRLIELFMKTAYIQPPTNQRGDDPPDIRPAFVHTFKTV 422
Query: 244 SRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSY 303
S +K + YGVI+CDPLV GLEK H W GYD+G + FLPSY
Sbjct: 423 KNS--KKSGRRYGVIECDPLVRKGLEKTGWHMVMPYMPMLVPPVNWSGYDRGAYFFLPSY 480
Query: 304 IMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGL 363
+MR HG+++Q++ +K+ +Q+Q VFEALD LGN K R+N R+L +V+ IW GG +A L
Sbjct: 481 LMRIHGAKQQREALKSTPRKQLQLVFEALDTLGNAKWRVNKRVLSIVDRIWNSGGRLADL 540
Query: 364 VDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCF 423
VD +VPLP+KP TED +++WK++V+ A K N ERHSQRCD ELKL+VARKMKDE+ F
Sbjct: 541 VDRSDVPLPEKPDTEDENILKKWKWKVKSANKENRERHSQRCDIELKLNVARKMKDEEGF 600
Query: 424 YYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIE 483
YYPHN+DFRGRAYPMHPHLNHLGSDLCRG+LEFAEG+PLG SGLRWLKIHLANLYAGG++
Sbjct: 601 YYPHNIDFRGRAYPMHPHLNHLGSDLCRGVLEFAEGKPLGSSGLRWLKIHLANLYAGGVD 660
Query: 484 KLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSV 543
KLS++GRL F ENH+ DIF+SAD P+ G RWWL+AEDPFQCLA CIN++EALRS P +
Sbjct: 661 KLSFEGRLAFTENHLDDIFNSADRPLEGRRWWLQAEDPFQCLAVCINITEALRSPCPETF 720
Query: 544 ISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNK 603
+SH+PIHQ G AAAVNLVA EKPADVYS IA RV DIMRRD+ +
Sbjct: 721 VSHIPIHQLG-----------------AAAVNLVAGEKPADVYSGIAARVLDIMRRDAEQ 763
Query: 604 DPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLF 663
DP FP+AL A+ L++Q+DRKLVKQTVMTSVYGVTYIGARDQIK+RL+E+ + TDD LF
Sbjct: 764 DPEVFPDALRARNLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSIFTDDTELF 823
Query: 664 TAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTE 723
AACYAAKVTL ALGE+F+AAR IMSWLG+CAK+IA +NQ V WTTPLGLPVVQPY K
Sbjct: 824 GAACYAAKVTLTALGEMFQAARDIMSWLGECAKIIASQNQPVRWTTPLGLPVVQPYRKMG 883
Query: 724 RHLV 727
RH V
Sbjct: 884 RHTV 887
>B9RLF2_RICCO (tr|B9RLF2) DNA-directed RNA polymerase OS=Ricinus communis
GN=RCOM_1466350 PE=3 SV=1
Length = 997
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/728 (59%), Positives = 534/728 (73%), Gaps = 16/728 (2%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ L++RQI+ ETEAW APNLP +KSL LGWFEPL++A+ E
Sbjct: 149 YTILKKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAKE 208
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE--EGCVQLVQAAVQIGM 130
Q+ +R K + S P D+LPA +AVI MHK+M L+M G V++VQAA +G
Sbjct: 209 QEL--SREKNNKLSHGPYFDALPADMMAVITMHKLMGLLMTTNGGNGSVRVVQAACAVGE 266
Query: 131 ALEQEVRIHKFLEGNKSLQSKKTEADTE----------ENLNNDKEKQRKFVNGLIKRKK 180
A+E E RIH+FLE K + + E E L ++EK RK V L+K++K
Sbjct: 267 AIEHEARIHRFLEKTKKKKKSTKNEEPEGKLEPVTSDAEKLAKEQEKLRKKVTELMKKQK 326
Query: 181 LKEVHVVLKQEEVS-PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHG 239
+++V + K + S PW + AQ K+G RLI+LLIETAY+ PVNQ D PDIRPAF H
Sbjct: 327 VQQVRGLTKGHDDSMPWGQEAQVKVGCRLIQLLIETAYIQPPVNQLGDGLPDIRPAFMHT 386
Query: 240 FKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLF 299
K + QK + YGVI+CDP+V GLEK A+H W+GYD+G +LF
Sbjct: 387 LKNVMKDT-QKTSRRYGVIECDPIVRNGLEKSARHMVIPYMPMLVPPLNWEGYDQGAYLF 445
Query: 300 LPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGN 359
LPSY+MRTHG+++Q++ +K +Q++ V+EAL+ LGNTK RIN ++L VV+ IWA GG
Sbjct: 446 LPSYVMRTHGAKQQRNAVKRTPWKQLEPVYEALNTLGNTKWRINKKILTVVDRIWANGGR 505
Query: 360 VAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKD 419
+AGL+D E+ PLP++ TED +I++WK++V+ KK N ERHSQRCD ELKL+VARKMKD
Sbjct: 506 LAGLIDREDEPLPEELETEDENEIKKWKWKVKNVKKENSERHSQRCDIELKLAVARKMKD 565
Query: 420 EDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYA 479
ED FYYPHNLDFRGRAYPMHPHLNHLGSD+CRG+LEFAEGRPLGKSG RWLKIHLAN+YA
Sbjct: 566 EDGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGKSGFRWLKIHLANVYA 625
Query: 480 GGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSS 539
GG++KLSY+GR+ F ENH+ IFDSAD P+ G RWWL AEDPFQCLA C NL+EA RSSS
Sbjct: 626 GGVDKLSYEGRVAFTENHLDYIFDSADRPLEGRRWWLGAEDPFQCLATCFNLAEAFRSSS 685
Query: 540 PNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRR 599
P + ISH+PIHQDGSCNGLQHYAALGRD+L AAAVNLV+ EKPADVYS IA RV DIMR
Sbjct: 686 PETTISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVSGEKPADVYSGIAARVLDIMRT 745
Query: 600 DSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDD 659
D+ KDP T PNAL AK+LI+++DRKLVKQTVMTSVYGVTYIGARDQIK+RL+E+ + DD
Sbjct: 746 DAEKDPGTNPNALHAKLLINEVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAVADD 805
Query: 660 RLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPY 719
L+ A+CYAAK TL AL E+FE AR IM+WLG+CAKVIA ENQ V WTTPLGLPVVQPY
Sbjct: 806 PSLYAASCYAAKTTLMALEEMFEGARSIMAWLGECAKVIASENQPVQWTTPLGLPVVQPY 865
Query: 720 CKTERHLV 727
+ RHL+
Sbjct: 866 RQLGRHLI 873
>K7L8U2_SOYBN (tr|K7L8U2) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 998
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/723 (57%), Positives = 526/723 (72%), Gaps = 28/723 (3%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ LRRRQ++ ETE W APNLP +KSL LGWFEPL++A+ E
Sbjct: 172 YQELRRRQVKIETETWEEAAKEYRELLMDMCEHKLAPNLPYMKSLFLGWFEPLRDAIVKE 231
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEE----GCVQLVQAAVQI 128
Q+ + K + + P LPA K+AVI MHK+M L+M E G ++VQAA I
Sbjct: 232 QEMYG--EGKNRTAYVPYFVQLPADKMAVIAMHKLMGLLMTGTEHATVGTARVVQAACGI 289
Query: 129 GMALEQEVRIHKFLEGNKSLQSKKTEAD-TEENLNNDKEKQ--RKFVNGLIKRKKLKEVH 185
G A+E EVRIHKFLE K + +++ + E++ + KE+Q RK V L+K++KL V
Sbjct: 290 GDAIENEVRIHKFLEKTKKKKGDRSKKNKASESVADIKEEQKLRKKVIDLMKKQKLVAVR 349
Query: 186 VVLK-QEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQS 244
++K +++ PW A + K+GSRLIELL++TAY+ P +Q D PDIRPAF H F+ +
Sbjct: 350 GLVKGKDDTKPWGAAIKTKVGSRLIELLMQTAYIQPPPDQLLDAAPDIRPAFVHSFRTVA 409
Query: 245 RSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYI 304
+ K K YG++QCDPL+L GLE+ AK+ W GYDKGGHLFLPSY+
Sbjct: 410 KVSA-KASKRYGIVQCDPLILKGLERTAKNMVIPYMPMLVPPVNWSGYDKGGHLFLPSYV 468
Query: 305 MRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLV 364
MRTHG+R+Q++ +K +Q++ VFEALD LG+TK R+N ++L VV+ IWA GG +A LV
Sbjct: 469 MRTHGARQQREAVKRAPRKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRIADLV 528
Query: 365 DCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFY 424
D ++VPLPDKP T+D ++I++WK++ + +K N ER+SQRCD ELKL+VARKMKDE+ FY
Sbjct: 529 DRDDVPLPDKPVTDDEEKIKKWKWKCKSLQKENRERYSQRCDIELKLAVARKMKDEEGFY 588
Query: 425 YPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEK 484
YPHNLDFRGRAYPMHPHLNHLGSDLCRG+LEFAEGR LGKSGL+WLKIHLANLYAGG++K
Sbjct: 589 YPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRFLGKSGLQWLKIHLANLYAGGVDK 648
Query: 485 LSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVI 544
LS++GRL F ENH DIFDSAD P+ G RWWL+AEDP QCLA CI L+EALRSSSP + I
Sbjct: 649 LSHEGRLVFTENHFEDIFDSADKPLQGRRWWLKAEDPLQCLAVCITLTEALRSSSPETFI 708
Query: 545 SHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKD 604
SH+P+HQ G AAAVNLVA EKPADVYS IA RV +IM+RD+ KD
Sbjct: 709 SHIPVHQLG-----------------AAAVNLVAGEKPADVYSGIAARVSNIMQRDAQKD 751
Query: 605 PSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFT 664
P+ FP+AL A+ L++Q+DRKLVKQTVMTSVYGVTYIGAR+QIK+RL+E+ I+DD LF
Sbjct: 752 PAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERNAISDDTELFG 811
Query: 665 AACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTER 724
A+CYAAKVTL AL E+F+ ARGIM+WLGDCAKVIA ENQ V WTTPLGLPVVQPY K +
Sbjct: 812 ASCYAAKVTLTALEEMFQGARGIMNWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGK 871
Query: 725 HLV 727
H++
Sbjct: 872 HII 874
>K7MG42_SOYBN (tr|K7MG42) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 812
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/708 (58%), Positives = 518/708 (73%), Gaps = 15/708 (2%)
Query: 2 RAEQEVREAE-TFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLG 60
+AE +V + + L+RRQIE+ETEAW APNLP +KSL LG
Sbjct: 99 KAEHKVDSSSYKYKLLKRRQIESETEAWAEAAREYGELLEDMRDKKLAPNLPYMKSLFLG 158
Query: 61 WFEPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEG--C 118
WFEPL+ A+ A+Q + K + S AP + LPA +AV+ MHK+M+L+M N G
Sbjct: 159 WFEPLRNAILADQDL--CKDSKCRMSHAPYFNDLPADMMAVVTMHKLMALLMTNANGVGT 216
Query: 119 VQLVQAAVQIGMALEQEVRIHKFLEGNKSLQS------KKTEADTEEN--LNNDKEKQRK 170
+++QAA QIG A+E E RI++F++ K +S +++ TEEN + + + RK
Sbjct: 217 ARVIQAACQIGEAVENEARIYQFMKREKENKSSHLAPVEQSGKLTEENGEMEQKQSRLRK 276
Query: 171 FVNGLIKR-KKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTP 229
V GL+K+ KKL+ + ++ +Q++ W + AQ K+GSRL++LLIETAY+ P NQ D P
Sbjct: 277 RVAGLMKKQKKLQAMGIIGRQDDWKTWGQEAQVKVGSRLMQLLIETAYIQPPTNQIGDGP 336
Query: 230 PDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKW 289
PDI PAFRH + S + Q+ + YGVI+CDPLV GLEK A+H W
Sbjct: 337 PDIHPAFRHTLRTLS-NESQRETRRYGVIECDPLVQNGLEKSARHMVIPYMPMLVPPINW 395
Query: 290 KGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDV 349
GYDKG +LFLPSY+MR HG+++Q++ +K Q+ VFEAL+ LGNTK R+N R+L V
Sbjct: 396 TGYDKGAYLFLPSYVMRVHGAKQQREAVKRAPKSQLDPVFEALNTLGNTKWRVNKRVLCV 455
Query: 350 VESIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTEL 409
++ IWA GG +A LVD ENVP P +P T D +I++WK++V+ KK N ERHSQRCD EL
Sbjct: 456 IDQIWANGGRLADLVDRENVPSPKEPDTIDEAEIRKWKWKVKAVKKENSERHSQRCDIEL 515
Query: 410 KLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRW 469
KL+VARKMKDE+ FYYPHNLDFRGRAYPMHP+LNHLGSDLCRG+LEFAEGR LGKSGLRW
Sbjct: 516 KLAVARKMKDEEAFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRSLGKSGLRW 575
Query: 470 LKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACI 529
LKIHLANLYAGG++KLSYDGR+ F ENH+ DIFDSAD P+ G WWL+AEDPFQCLAACI
Sbjct: 576 LKIHLANLYAGGVDKLSYDGRISFTENHLDDIFDSADRPLEGKHWWLQAEDPFQCLAACI 635
Query: 530 NLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEI 589
NLSEALRS +P + ISH+P+HQDGSCNGLQHYAALGRD+L AAAVNLV ++PADVYS I
Sbjct: 636 NLSEALRSPTPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGDQPADVYSGI 695
Query: 590 AVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKR 649
A RV +IM+RD+ KDP T PNAL A+ LI Q+DRKLVKQTVMTSVYGVTYIGARDQIK+R
Sbjct: 696 AARVLEIMKRDAEKDPRTNPNALHARRLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRR 755
Query: 650 LEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKV 697
L+E+ I DD LF A+CYAAK TL AL E+FEAAR IM WLGDCAKV
Sbjct: 756 LKERCAIEDDVELFAASCYAAKTTLTALEEMFEAARSIMGWLGDCAKV 803
>I1JWD0_SOYBN (tr|I1JWD0) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
Length = 547
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/423 (89%), Positives = 398/423 (94%)
Query: 305 MRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLV 364
MRTHGSRKQQDVMKNV G QMQKVFE LDILGNTK R+N R+L VVESIWAGGGN+AGLV
Sbjct: 1 MRTHGSRKQQDVMKNVNGAQMQKVFETLDILGNTKWRVNRRMLGVVESIWAGGGNIAGLV 60
Query: 365 DCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFY 424
DC++VP PDKPP EDLK IQEWK VRKAKK+NLERHS RCDTELKLSVARKMKDE+ FY
Sbjct: 61 DCKDVPKPDKPPVEDLKLIQEWKCSVRKAKKINLERHSLRCDTELKLSVARKMKDEEGFY 120
Query: 425 YPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEK 484
YPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEK
Sbjct: 121 YPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEK 180
Query: 485 LSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVI 544
SYDGRLGF+E+HIHDIFDSAD+P+NGNRWWL AEDPFQCLAACINLSEALRSSSPNS I
Sbjct: 181 HSYDGRLGFIEDHIHDIFDSADHPINGNRWWLTAEDPFQCLAACINLSEALRSSSPNSFI 240
Query: 545 SHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKD 604
SHLPIHQDGSCNGLQHYAALGRD LEAAAVNLVAKEKPADVY+EIAVRV+DIMRRDSNKD
Sbjct: 241 SHLPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAKEKPADVYTEIAVRVYDIMRRDSNKD 300
Query: 605 PSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFT 664
P TFPNALLAKVL+ QIDRKLVKQTVMTSVYGVTYIGAR+QIK+RL EKGLITDDRLL+
Sbjct: 301 PDTFPNALLAKVLLGQIDRKLVKQTVMTSVYGVTYIGAREQIKRRLGEKGLITDDRLLYA 360
Query: 665 AACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTER 724
A+CYAAKVTLAALGEVFEAARGIM WLGDCAKVIA ENQAV WTTPLGLPVVQPYCKTER
Sbjct: 361 ASCYAAKVTLAALGEVFEAARGIMGWLGDCAKVIACENQAVRWTTPLGLPVVQPYCKTER 420
Query: 725 HLV 727
+ +
Sbjct: 421 YQI 423
>M7Z702_TRIUA (tr|M7Z702) DNA-directed RNA polymerase 3, chloroplastic
OS=Triticum urartu GN=TRIUR3_09671 PE=4 SV=1
Length = 921
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/695 (56%), Positives = 500/695 (71%), Gaps = 44/695 (6%)
Query: 49 PNLPRVKSLLLGWFEPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMM 108
P R +L + PL++AV +Q R K+ + A + LPA KVAVIVMHKMM
Sbjct: 130 PKDERGMNLEFFYDNPLRDAVARDQDVQ--RRKRVKHVYAKYLLLLPAEKVAVIVMHKMM 187
Query: 109 SLVMENEEGC--VQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKE 166
L+M +++GC V++VQAA IG A+E+E ++ F + + KT+++ + LN ++
Sbjct: 188 GLLMSSKDGCGSVRVVQAAHSIGEAVEREYKVQAFFQKTRRKTRSKTDSENDPALNKEQA 247
Query: 167 KQRKFVNGLIKRKKLKEVHVVLKQE-EVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQS 225
K RK V L++R+KL E +++QE E+ W AQ K+
Sbjct: 248 KCRKLVKSLVRRRKLTEAQKLVQQEIELEEWGTEAQVKVCF------------------- 288
Query: 226 ADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXX 285
D+ P I + G+++ K + VI+CDPLV G E A+H
Sbjct: 289 PDSIPTITEFCLICY-------GRRLKKKHFVIECDPLVHEGFESTARHVEIPYLPMLVP 341
Query: 286 XKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGR 345
KWKGYDKGGHLFLPSY+MRTHG + Q++ +K+V +Q++KVFEALDILG TK R+N R
Sbjct: 342 PTKWKGYDKGGHLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEALDILGGTKWRVNRR 401
Query: 346 LLDVVESIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRC 405
+ DVVE+IW+ GG +AGLVD N+PLP++P TED +IQ+WK+ V+K KK N E H++RC
Sbjct: 402 VHDVVETIWSRGGGIAGLVDKGNIPLPEQPETEDPDEIQKWKWSVKKTKKANRELHAERC 461
Query: 406 DTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKS 465
DTELKLSVARKM++ED FYYPHNLDFRGRAYPMHPHL+HLGSDLCRG+LE+AEGRPLGKS
Sbjct: 462 DTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLEYAEGRPLGKS 521
Query: 466 GLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCL 525
GLRWLKIHLAN Y GGIEKLS++ +L FVE+H+ DIFDSA NPV+GN WW+ AEDPFQCL
Sbjct: 522 GLRWLKIHLANKYGGGIEKLSHESKLAFVEDHLPDIFDSASNPVDGNCWWINAEDPFQCL 581
Query: 526 AACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADV 585
AAC++LS+AL S SP+ +SHLPIHQDGSCNGLQHYAALGRD + AAAVNLV EKPAD+
Sbjct: 582 AACMDLSKALESPSPHDAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVNLVPGEKPADI 641
Query: 586 YSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQ 645
YSEIA RV D++R DS KDP+T P+ LAKVL+D++DRKLVKQTVMTSVYGVT+IGAR Q
Sbjct: 642 YSEIAARVLDVVREDSMKDPATDPSVSLAKVLVDEVDRKLVKQTVMTSVYGVTFIGARQQ 701
Query: 646 IKKRLEEKGLITDDRLLFTAACYAA-------------KVTLAALGEVFEAARGIMSWLG 692
IKKRL+EKG ITDD+LL+ +CYA KVTL ALG++F++AR IM+WLG
Sbjct: 702 IKKRLQEKGHITDDKLLYDVSCYATRRQGHAVTVVSLMKVTLDALGQMFQSARAIMAWLG 761
Query: 693 DCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
+CAK+IA +NQ V WT+P+GLPVVQPY K + +++
Sbjct: 762 ECAKMIASKNQPVRWTSPVGLPVVQPYKKYKNYMI 796
>N1R290_AEGTA (tr|N1R290) DNA-directed RNA polymerase 3, chloroplastic
OS=Aegilops tauschii GN=F775_25754 PE=4 SV=1
Length = 887
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/758 (53%), Positives = 505/758 (66%), Gaps = 106/758 (13%)
Query: 48 APNLPRVKSLLLGWFEPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKM 107
AP LP VKSL LGWFEPL++AV +Q R K+ + A + LPA KVAVIVMHKM
Sbjct: 7 APQLPYVKSLFLGWFEPLRDAVARDQDVQ--RRKRVKHVYAKYLLLLPAEKVAVIVMHKM 64
Query: 108 MSLVMENEEGC--VQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDK 165
M L+M +++GC V++VQAA IG A+E+E ++ F + + KTE++ + L+ ++
Sbjct: 65 MGLLMSSKDGCGSVRVVQAAHSIGEAVEREYKVQAFFQKTRRKTRSKTESENDPGLDKEQ 124
Query: 166 EKQRKFVNGLIKRKKLKEVHVVLKQE-EVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQ 224
K RK V L++R+KL E +++QE E+ W AQ K+
Sbjct: 125 AKCRKLVKSLVRRRKLTEAQKLVQQEIELEEWGTEAQVKVCF------------------ 166
Query: 225 SADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXX 284
PD P G+++ K + VI+CDPLV G E A+H
Sbjct: 167 -----PDSTPTMTEFC---LICYGRRLKKKHFVIECDPLVHEGFESTARHVEIPYLPMLV 218
Query: 285 XXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFE---------ALDIL 335
KWKGYDKGGHLFLPSY+MRTHG + Q++ +K+V +Q++KVFE ALDIL
Sbjct: 219 PPTKWKGYDKGGHLFLPSYVMRTHGVKDQKEAIKSVPRKQLRKVFEQSEALSYWQALDIL 278
Query: 336 GNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKK 395
G TK R+N R+ DVVE+IW+ GG +AGLVD N+PLP++P TED +IQ+WK+ V+K KK
Sbjct: 279 GGTKWRVNRRVHDVVETIWSRGGGIAGLVDKGNIPLPEQPETEDPDEIQKWKWSVKKTKK 338
Query: 396 MNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLE 455
N E H++RCDTELKLSVARKM++ED FYYPHNLDFRGRAYPMHPHL+HLGSDLCRG+LE
Sbjct: 339 ANRELHAERCDTELKLSVARKMREEDGFYYPHNLDFRGRAYPMHPHLSHLGSDLCRGVLE 398
Query: 456 FAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWW 515
+AEGRPLGKSGLRWLKIHLAN Y GGIEKLS++ +L FVE+H+ DIFDSA NPV+GN WW
Sbjct: 399 YAEGRPLGKSGLRWLKIHLANKYGGGIEKLSHESKLTFVEDHLPDIFDSAANPVDGNCWW 458
Query: 516 LRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVN 575
+ AEDPFQCLAAC++LS AL SSSP+ +SHLPIHQDGSCNGLQHYAALGRD + AAAVN
Sbjct: 459 INAEDPFQCLAACMDLSNALESSSPHGAVSHLPIHQDGSCNGLQHYAALGRDYMGAAAVN 518
Query: 576 LVAKEKPADVYSEIAV------------------RVHDIMRRDSNKDPSTFPNALLAKVL 617
LV EKPAD+YSEIA RV D++R DS KDP+T P+ LAKVL
Sbjct: 519 LVPGEKPADIYSEIAARCLPRRPPFPLPSLIYPGRVLDVVREDSMKDPATDPSVPLAKVL 578
Query: 618 ID-----------------------------------QIDRKLVKQTVMTSVYGVTYIGA 642
+D Q+DRKLVKQTVMTSVYGVT+IGA
Sbjct: 579 VDEVSLLPAPLCLNQEIFFFMYLFFNKTVEDLDIGSLQVDRKLVKQTVMTSVYGVTFIGA 638
Query: 643 RDQIKKRLEEKGLITDDRLLFTAACYAA-------------KVTLAALGEVFEAARGIMS 689
R QI KRL+EKG ITDD+LL+ +CYA KVTL ALG++F++AR IM+
Sbjct: 639 RQQIMKRLQEKGHITDDKLLYDVSCYATRRQGHAVTVVSLMKVTLDALGQMFQSARAIMA 698
Query: 690 WLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
WLGDCAK+IA +NQ V WT+P+GLPVVQPY K + +++
Sbjct: 699 WLGDCAKMIASKNQPVRWTSPVGLPVVQPYKKYKNYMI 736
>Q8L6F9_9BRYO (tr|Q8L6F9) DNA-directed RNA polymerase OS=Physcomitrella patens
GN=rpoT1 PE=3 SV=1
Length = 1087
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/734 (50%), Positives = 502/734 (68%), Gaps = 21/734 (2%)
Query: 15 ALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQK 74
ALR RQ + ETEAW APNLP +SLLLGWFEPL++A+ EQK
Sbjct: 228 ALRMRQFKIETEAWHQAAAEYKELVAEMCKKNLAPNLPATRSLLLGWFEPLRDAIAQEQK 287
Query: 75 AHQARSKKQQASI-APNVDSLPAAKVAVIVMHKMMSLVMENEE-GCVQLVQAAVQIGMAL 132
++ R+ ++ +I P + LPA +AVI MH++MSL+M ++E GCV++V AA+QIG A+
Sbjct: 288 DYEERNFREHRAIYGPFLAKLPADMLAVITMHRLMSLLMSDQEHGCVKVVHAALQIGEAV 347
Query: 133 EQEVRIHKFLEGNKSLQSKKT-----EADTEENLNNDKEKQRKFVNGLIKRKKLKEV--- 184
EQEV I+K L + + K +A + + N D ++ +K K KE
Sbjct: 348 EQEVGIYKLLRSKRKVAKKVKNKVSGDALDDLDTNTDDSIANSVLDSDLKLKLAKEKVKK 407
Query: 185 -----------HVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIR 233
VV + PW A Q K+GSRL+EL++ET+ + SP +Q+A ++R
Sbjct: 408 LVKQQKLRLVGKVVQQANGDEPWGPAIQVKVGSRLLELMLETSVMRSPADQNAQDMTELR 467
Query: 234 PAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYD 293
PAF+H + + + YGVI+CDP V++ L+K +H + W G+
Sbjct: 468 PAFKHTLRNYPIKNKNNMNRIYGVIECDPAVMSALDKSVQHMVMPYMPMLVKPRAWTGFY 527
Query: 294 KGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESI 353
GG+L L S IMRTHG+++ +D + + + M K+ +ALD LG+T+ +IN +LDV+E +
Sbjct: 528 DGGYLHLKSTIMRTHGAKELRDTIISTLRQDMIKIVQALDALGSTQWKINNVVLDVLEQV 587
Query: 354 WAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSV 413
W GG +A LVD E+VPLPDKP ++D ++I+ W+ AK+ N ERHS RCDTELKL+
Sbjct: 588 WKDGGRLADLVDAEDVPLPDKPESDDFEEIRNWRRHTASAKRTNSERHSVRCDTELKLAA 647
Query: 414 ARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIH 473
ARK++DE+ F+YPHNLDFRGRAYP+HPHLNHLGSD+CRG+L+FAEGR LG +GLRWLKIH
Sbjct: 648 ARKLRDEEGFFYPHNLDFRGRAYPIHPHLNHLGSDMCRGILQFAEGRALGPTGLRWLKIH 707
Query: 474 LANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSE 533
LANLY G + K+S+D R+ +V+ + +FDSAD P++G+RWWL AEDPFQ LA C+++
Sbjct: 708 LANLYGGKVGKMSFDARVAWVDEVMEKVFDSADRPLDGSRWWLDAEDPFQFLATCLDIRN 767
Query: 534 ALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRV 593
A++S +P + +SHLP+HQDGSCNGLQHYAALGRD + A +VNLVA +KPADVYS IA RV
Sbjct: 768 AIKSGNPETYVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLVAGDKPADVYSGIAARV 827
Query: 594 HDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEK 653
+IM RD+ KDP T +A AK+L+ +IDRKLVKQTVMTSVYGVT++GAR QI RL+E+
Sbjct: 828 REIMERDAQKDPKTSRHAANAKLLLPEIDRKLVKQTVMTSVYGVTFVGARMQIFNRLKER 887
Query: 654 GLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGL 713
G I + ++ AACYAAK TL ALGE+F+ AR IMSWLGDCAK+IA + V WTTPLGL
Sbjct: 888 GTIQEQTEMYRAACYAAKTTLNALGEMFKEARCIMSWLGDCAKIIASNGETVKWTTPLGL 947
Query: 714 PVVQPYCKTERHLV 727
PVVQPY K RHLV
Sbjct: 948 PVVQPYRKPGRHLV 961
>Q8SBD4_9BRYO (tr|Q8SBD4) DNA-directed RNA polymerase OS=Physcomitrella patens
GN=rpoT1 PE=2 SV=1
Length = 1087
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/734 (50%), Positives = 502/734 (68%), Gaps = 21/734 (2%)
Query: 15 ALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQK 74
ALR RQ + ETEAW APNLP +SLLLGWFEPL++A+ EQK
Sbjct: 228 ALRMRQFKIETEAWHQAAAEYKELVAEMCKKNLAPNLPATRSLLLGWFEPLRDAIAQEQK 287
Query: 75 AHQARSKKQQASI-APNVDSLPAAKVAVIVMHKMMSLVMENEE-GCVQLVQAAVQIGMAL 132
++ R+ ++ +I P + LPA +AVI MH++MSL+M ++E GCV++V AA+QIG A+
Sbjct: 288 DYEERNFREHRAIYGPFLAKLPADMLAVITMHRLMSLLMSDQEHGCVKVVHAALQIGEAV 347
Query: 133 EQEVRIHKFLEGNKSLQSKKT-----EADTEENLNNDKEKQRKFVNGLIKRKKLKEV--- 184
EQEV I+K L + + K +A + + N D ++ +K K KE
Sbjct: 348 EQEVGIYKLLRSKRKVAKKVKNKVSGDALDDLDTNTDDSIANSVLDSDLKLKLAKEKVKK 407
Query: 185 -----------HVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIR 233
VV + PW A Q K+GSRL+EL++ET+ + SP +Q+A ++R
Sbjct: 408 LVKQQKLRLVGKVVQQANGDEPWGPAIQVKVGSRLLELMLETSVMRSPADQNAQDMTELR 467
Query: 234 PAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYD 293
PAF+H + + + YGVI+CDP V++ L+K +H + W G+
Sbjct: 468 PAFKHTLRNYPIKNKNNMNRIYGVIECDPAVMSALDKSVQHMVMPYMPMLVKPRAWTGFY 527
Query: 294 KGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESI 353
GG+L L S IMRTHG+++ +D + + + M K+ +ALD LG+T+ +IN +LDV+E +
Sbjct: 528 DGGYLHLKSTIMRTHGAKELRDTIISTLRQDMIKIVQALDALGSTQWKINNVVLDVLEQM 587
Query: 354 WAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSV 413
W GG +A LVD E+VPLPDKP ++D ++I+ W+ AK+ N ERHS RCDTELKL+
Sbjct: 588 WKDGGRLADLVDAEDVPLPDKPESDDFEEIRNWRRHTASAKRTNSERHSVRCDTELKLAA 647
Query: 414 ARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIH 473
ARK++DE+ F+YPHNLDFRGRAYP+HPHLNHLGSD+CRG+L+FAEGR LG +GLRWLKIH
Sbjct: 648 ARKLRDEEGFFYPHNLDFRGRAYPIHPHLNHLGSDMCRGILQFAEGRALGPTGLRWLKIH 707
Query: 474 LANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSE 533
LANLY G + K+S+D R+ +V+ + +FDSAD P++G+RWWL AEDPFQ LA C+++
Sbjct: 708 LANLYGGKVGKMSFDARVAWVDEVMEKVFDSADRPLDGSRWWLDAEDPFQFLATCLDIRN 767
Query: 534 ALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRV 593
A++S +P + +SHLP+HQDGSCNGLQHYAALGRD + A +VNLVA +KPADVYS IA RV
Sbjct: 768 AIKSGNPETYVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLVAGDKPADVYSGIAARV 827
Query: 594 HDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEK 653
+IM RD+ KDP T +A AK+L+ +IDRKLVKQTVMTSVYGVT++GAR QI RL+E+
Sbjct: 828 REIMERDAQKDPKTSRHAANAKLLLPEIDRKLVKQTVMTSVYGVTFVGARMQIFNRLKER 887
Query: 654 GLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGL 713
G I + ++ AACYAAK TL ALGE+F+ AR IMSWLGDCAK+IA + V WTTPLGL
Sbjct: 888 GTIQEQTEMYRAACYAAKTTLNALGEMFKEARCIMSWLGDCAKIIASNGETVKWTTPLGL 947
Query: 714 PVVQPYCKTERHLV 727
PVVQPY K RHLV
Sbjct: 948 PVVQPYRKPGRHLV 961
>A9TL52_PHYPA (tr|A9TL52) DNA-directed RNA polymerase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_196123 PE=3 SV=1
Length = 1088
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/735 (51%), Positives = 503/735 (68%), Gaps = 22/735 (2%)
Query: 15 ALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQK 74
ALR RQ + ETEAW APNLP +SLLLGWFEPL++A+ EQK
Sbjct: 228 ALRMRQFKIETEAWHQAAAEYKELVAEMCKKNLAPNLPATRSLLLGWFEPLRDAIAQEQK 287
Query: 75 AHQARSKKQQASI-APNVDSLPAAKVAVIVMHKMMSLVMENEE-GCVQLVQAAVQIGMAL 132
++ R+ ++ +I P + LPA +AVI MH++MSL+M ++E GCV++V AA+QIG A+
Sbjct: 288 DYEERNFREHRAIYGPFLAKLPADMLAVITMHRLMSLLMSDQEHGCVKVVHAALQIGEAV 347
Query: 133 EQEVRIHKFLEGNKSLQSKKT-----EADTEENLNNDKEKQRKFVNGLIKRKKLKEV--- 184
EQEV I+K L + + K +A + + N D ++ +K K KE
Sbjct: 348 EQEVGIYKLLRSKRKVAKKVKNKVSGDALDDLDTNTDDSIANSVLDSDLKLKLAKEKVKK 407
Query: 185 -----------HVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIR 233
VV + PW A Q K+GSRL+EL++ET+ + SP +Q+A ++R
Sbjct: 408 LVKQQKLRLVGKVVQQANGDEPWGPAIQVKVGSRLLELMLETSVMRSPADQNAQDMTELR 467
Query: 234 PAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYD 293
PAF+H + + + YGVI+CDP V++ L+K +H + W G+
Sbjct: 468 PAFKHTLRNYPIKNKNNMNRIYGVIECDPAVMSALDKSVQHMVMPYMPMLVKPRAWTGFY 527
Query: 294 KGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESI 353
GG+L L S IMRTHG+++ +D + + + M K+ +ALD LG+T+ +IN +LDV+E +
Sbjct: 528 DGGYLHLKSTIMRTHGAKELRDTIISTLRQDMIKIVQALDALGSTQWKINNVVLDVLEQM 587
Query: 354 WAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSV 413
W GG +A LVD E+VPLPDKP ++D ++I+ W+ AK+ N ERHS RCDTELKL+
Sbjct: 588 WKDGGRLADLVDAEDVPLPDKPESDDFEEIRNWRRHTASAKRTNSERHSVRCDTELKLAA 647
Query: 414 ARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIH 473
ARK++DE+ F+YPHNLDFRGRAYP+HPHLNHLGSD+CRG+L+FAEGR LG +GLRWLKIH
Sbjct: 648 ARKLRDEEGFFYPHNLDFRGRAYPIHPHLNHLGSDMCRGILQFAEGRALGPTGLRWLKIH 707
Query: 474 LANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSE 533
LANLY G + K+S+D R+ +V+ + +FDSAD P++G+RWWL AEDPFQ LA C+++
Sbjct: 708 LANLYGGKVGKMSFDARVAWVDEVMEKVFDSADRPLDGSRWWLDAEDPFQFLATCLDIRN 767
Query: 534 ALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRV 593
A++S +P + +SHLP+HQDGSCNGLQHYAALGRD + A +VNLVA +KPADVYS IA RV
Sbjct: 768 AIKSGNPETYVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLVAGDKPADVYSGIAARV 827
Query: 594 HDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEK 653
+IM RD+ KDP T +A AK+L+ +IDRKLVKQTVMTSVYGVT++GAR QI RL+E+
Sbjct: 828 REIMERDAQKDPKTSRHAANAKLLLPEIDRKLVKQTVMTSVYGVTFVGARMQIFNRLKER 887
Query: 654 GLITDDRLLFTAACYAAKV-TLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLG 712
G I + ++ AACYAAKV TL ALGE+F+ AR IMSWLGDCAK+IA + V WTTPLG
Sbjct: 888 GTIQEQTEMYRAACYAAKVTTLNALGEMFKEARCIMSWLGDCAKIIASNGETVKWTTPLG 947
Query: 713 LPVVQPYCKTERHLV 727
LPVVQPY K RHLV
Sbjct: 948 LPVVQPYRKPGRHLV 962
>K4BC86_SOLLC (tr|K4BC86) DNA-directed RNA polymerase OS=Solanum lycopersicum
GN=Solyc02g089340.2 PE=3 SV=1
Length = 711
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/603 (60%), Positives = 454/603 (75%), Gaps = 26/603 (4%)
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTEENLNN------DKEKQRKFVNGLIKRKKLKEVH 185
L +VRIHKFLE +++K +A+ + N+ + +++K K V L+K++KL+ V+
Sbjct: 4 LMHQVRIHKFLE-----KTEKHKAEKDRNMEDGEHATLEQKKLHKKVTSLMKKQKLRAVN 58
Query: 186 -VVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQS 244
+V Q++ PW + A+AK+GSRLIE L++TAY+ SP +Q A PPDIRPAF H + +
Sbjct: 59 QIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRPAFIHSTRTLA 118
Query: 245 RSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYI 304
+ + + YGVIQCD LV GLE+ A+H KW GYDKGGHL+LPSY+
Sbjct: 119 KE-TKSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYV 177
Query: 305 MRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLV 364
MRTHG+R+Q++ +K Q+Q VFEALD LG+TK RIN R+L VV+ IWAGGG +A LV
Sbjct: 178 MRTHGARQQREAVKRTSRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRLADLV 237
Query: 365 DCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFY 424
D ++VPLP++P TED +W+++V+ KK N ERHSQRCD ELKL+VA +MKDE+ F+
Sbjct: 238 DRDDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAHRMKDEEGFF 297
Query: 425 YPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEK 484
YPHN+DFRGRAYPMHPHLNHLGSD+CRG+LEFA GRPLGKSGL +K
Sbjct: 298 YPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGKSGLALVKDTPCKF------- 350
Query: 485 LSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVI 544
+ F E+H+ DIFDSAD P+ G WWL AEDPFQCLA CINLSEA+RSSSP +VI
Sbjct: 351 ------ISFTESHLDDIFDSADKPLEGRCWWLNAEDPFQCLAVCINLSEAVRSSSPETVI 404
Query: 545 SHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKD 604
SH+P+HQDGSCNGLQHYAALGRD+L AAAVNLVA EKPADVYS IA RV DIM RD+ +D
Sbjct: 405 SHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMNRDAQRD 464
Query: 605 PSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFT 664
P+ FP+A+ A+VL++Q+DRKLVKQTVMTSVYGVTYIGARDQIK+RL+E+G I DD LF
Sbjct: 465 PAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDTELFG 524
Query: 665 AACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTER 724
AACYAAKVTL ALGE+FEAAR IM+WLG+CAK+IA EN+ V WTTPLGLPVVQPY K R
Sbjct: 525 AACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGR 584
Query: 725 HLV 727
H +
Sbjct: 585 HFI 587
>Q8SBD3_9BRYO (tr|Q8SBD3) DNA-directed RNA polymerase OS=Physcomitrella patens
GN=rpoT2 PE=2 SV=1
Length = 1065
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/731 (51%), Positives = 501/731 (68%), Gaps = 23/731 (3%)
Query: 16 LRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKA 75
L +RQ++ ETEAW APNLP +SLLL WFEPL++ + EQ+A
Sbjct: 213 LHKRQVKIETEAWQQAATEYRELMTEMCRKSLAPNLPFAQSLLLSWFEPLRDGILEEQRA 272
Query: 76 HQARSKKQQASI-APNVDSLPAAKVAVIVMHKMMSLVM-ENEEGCVQLVQAAVQIGMALE 133
+ R ++ S+ P + LPA +AVI MH++M L+M + E GCV+++ AAV IG A+E
Sbjct: 273 YGNREHREHRSMYGPYMCQLPADMLAVITMHRLMGLLMCDQEHGCVKVIHAAVVIGEAVE 332
Query: 134 QEVRIHKFLEGNKSLQSKKTEADTE---ENLNNDK-EKQRK-----------FVNGLIKR 178
QEVRI + + K +SK E +T + NN++ E RK V L+K+
Sbjct: 333 QEVRIFQLMNSQK--KSKDAEGNTNSLGDVANNEELEATRKADLKSKKVVRDKVKKLVKQ 390
Query: 179 KKLKEVHVVLKQEEVS-PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFR 237
KL+ V +LK PWS KLGSRL+EL++ET++V +P Q D ++RPAF+
Sbjct: 391 NKLRRVDSILKHASTDEPWSTVIHVKLGSRLLELMLETSFVRAPACQDGDDFGELRPAFQ 450
Query: 238 HGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGH 297
H FK + Q + + YGVI+CD LVLA +++ KH WKG+++GG+
Sbjct: 451 HKFK--NHVLRQNVNRIYGVIECDQLVLAEIDQSVKHMVMPYMPMLVKPLPWKGFNEGGY 508
Query: 298 LFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGG 357
L+L S IMRT G+++Q+ + + + M+ V EAL++LG T R+N R+L+VVE +W G
Sbjct: 509 LYLKSSIMRTQGAKEQRMAVIDTPRKHMKVVVEALNVLGETGWRVNKRVLEVVEKLWKAG 568
Query: 358 GNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKM 417
G +A LV+ ++VP+P++P T D + +WK V +AK+ N ERHS RCDTELKL VA+K+
Sbjct: 569 GGIADLVEADDVPIPERPDTSDKEVWHKWKVAVSQAKRTNSERHSLRCDTELKLGVAKKL 628
Query: 418 KDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANL 477
DE+ FYYPHNLDFRGRAYPMHPHLNHLG+DLCRGLL FA+G+PLG SGLRW+KI LANL
Sbjct: 629 IDEEAFYYPHNLDFRGRAYPMHPHLNHLGNDLCRGLLIFADGKPLGPSGLRWIKIQLANL 688
Query: 478 YAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRS 537
Y G + K+S+D R F E+ + +I DSA+ P++G+R WL+AEDPFQ LAACI+L +AL S
Sbjct: 689 YGGSVGKMSFDDRAAFAEDRMEEILDSAERPLDGSRLWLKAEDPFQFLAACIDLRDALAS 748
Query: 538 SSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIM 597
+P + +SHLP+HQDGSCNGLQHYAALGRD + A +VNL+A +KPADVYS IA RV IM
Sbjct: 749 GNPETFVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLIAGDKPADVYSGIAERVKIIM 808
Query: 598 RRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLIT 657
+D+ K+P T NA A++L QIDRKLVKQTVMTSVYGVT+IGAR QI RL+E+ I
Sbjct: 809 EKDALKNPLTSRNAASARLLQGQIDRKLVKQTVMTSVYGVTFIGARMQILNRLKERSPIA 868
Query: 658 DDRL-LFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVV 716
D + + AACYAAKVTL ALGE+F+ AR IMSWLGDCAK+IA V WT+PLGLP+V
Sbjct: 869 VDPVDTYRAACYAAKVTLDALGEMFKEARCIMSWLGDCAKIIAAAGHTVRWTSPLGLPIV 928
Query: 717 QPYCKTERHLV 727
QPY K RHLV
Sbjct: 929 QPYRKHSRHLV 939
>A9TJW1_PHYPA (tr|A9TJW1) DNA-directed RNA polymerase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_223008 PE=3 SV=1
Length = 1065
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/731 (51%), Positives = 500/731 (68%), Gaps = 23/731 (3%)
Query: 16 LRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKA 75
L +RQ++ ETEAW APNLP +SLLL WFEPL++ + EQ+A
Sbjct: 213 LHKRQVKIETEAWQQAATEYRELMTEMCRKSLAPNLPFAQSLLLSWFEPLRDGILEEQRA 272
Query: 76 HQARSKKQQASI-APNVDSLPAAKVAVIVMHKMMSLVM-ENEEGCVQLVQAAVQIGMALE 133
+ R ++ S+ P + LPA +AVI MH++M L+M + E GCV+++ AAV IG A+E
Sbjct: 273 YGNREHREHRSMYGPYMCQLPADMLAVITMHRLMGLLMCDQEHGCVKVIHAAVVIGEAVE 332
Query: 134 QEVRIHKFLEGNKSLQSKKTEADTE---ENLNNDK-EKQRK-----------FVNGLIKR 178
QEVRI + + K +SK E +T + NN++ E RK V L+K+
Sbjct: 333 QEVRIFQLMNSQK--KSKDAEGNTNSLGDVANNEELEATRKADLKSKKVVRDKVKKLVKQ 390
Query: 179 KKLKEVHVVLKQEEVS-PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFR 237
KL+ V +LK PWS KLGSRL+EL++ET++V +P Q D ++RPAF+
Sbjct: 391 NKLRRVDSILKHASTDEPWSTVIHVKLGSRLLELMLETSFVRAPACQDGDDFGELRPAFQ 450
Query: 238 HGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGH 297
H FK + Q + + YGVI+CD LVLA +++ KH WKG+++GG+
Sbjct: 451 HKFK--NHVLRQNVNRIYGVIECDQLVLAEIDQSVKHMVMPYMPMLVKPLPWKGFNEGGY 508
Query: 298 LFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGG 357
L+L S IMRT G+++Q+ + + + M+ V EAL++LG T R+N R+L+VVE +W G
Sbjct: 509 LYLKSSIMRTQGAKEQRMAVIDTPRKHMKVVVEALNVLGETGWRVNKRVLEVVEKLWKAG 568
Query: 358 GNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKM 417
G +A LV+ ++VP+P++P T D + +WK V +AK+ N ERHS RCDTELKL VA K+
Sbjct: 569 GGIADLVEADDVPIPERPDTSDKEVWHKWKVAVSQAKRTNSERHSLRCDTELKLGVANKL 628
Query: 418 KDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANL 477
DE+ FYYPHNLDFRGRAYPMHPHLNHLG+DLCRGLL FA+G+PLG SGLRW+KI LANL
Sbjct: 629 IDEEAFYYPHNLDFRGRAYPMHPHLNHLGNDLCRGLLIFADGKPLGPSGLRWIKIQLANL 688
Query: 478 YAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRS 537
Y G + K+S+D R F E+ + +I DSA+ P++G+R WL+AEDPFQ LAACI+L +AL S
Sbjct: 689 YGGSVGKMSFDDRAAFAEDRMEEILDSAERPLDGSRLWLKAEDPFQFLAACIDLRDALAS 748
Query: 538 SSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIM 597
+P + +SHLP+HQDGSCNGLQHYAALGRD + A +VNL+A +KPADVYS IA RV IM
Sbjct: 749 GNPETFVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLIAGDKPADVYSGIAERVKIIM 808
Query: 598 RRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLIT 657
+D+ K+P T NA A++L QIDRKLVKQTVMTSVYGVT+IGAR QI RL+E+ I
Sbjct: 809 EKDALKNPLTSRNAASARLLQGQIDRKLVKQTVMTSVYGVTFIGARMQILNRLKERSPIA 868
Query: 658 DDRL-LFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVV 716
D + + AACYAAKVTL ALGE+F+ AR IMSWLGDCAK+IA V WT+PLGLP+V
Sbjct: 869 VDPVDTYRAACYAAKVTLDALGEMFKEARCIMSWLGDCAKIIAAAGHTVRWTSPLGLPIV 928
Query: 717 QPYCKTERHLV 727
QPY K RHLV
Sbjct: 929 QPYRKHSRHLV 939
>G7LG75_MEDTR (tr|G7LG75) DNA-directed RNA polymerase OS=Medicago truncatula
GN=MTR_8g065900 PE=3 SV=1
Length = 727
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/582 (61%), Positives = 448/582 (76%), Gaps = 3/582 (0%)
Query: 148 LQSKKTEADTEENLNNDKEKQRKFVNGLIKR-KKLKEVHVVLKQEEVSPWSRAAQAKLGS 206
++ + A+ E L ++++ R V LIK+ KK + + +V +++ PW + AQ K+GS
Sbjct: 23 VKGENLTAEENEKLAKEEKRLRNKVASLIKKQKKQQALGIVKGRDQAKPWGQEAQVKVGS 82
Query: 207 RLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLA 266
RLI+LLIETAY+ P N+ D PDI PAF+H K S + YGVI+CDP++
Sbjct: 83 RLIQLLIETAYLEPPANKFGDGGPDIFPAFKHTLKTISNDSNNGS-RRYGVIECDPMIQK 141
Query: 267 GLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQ 326
GLEK A++ W GYDKG +LFLPSY+MR HG+++Q+D +K Q+
Sbjct: 142 GLEKTARNMVIPYMPMLVPPNNWIGYDKGAYLFLPSYVMRIHGAKQQRDALKWAPKNQLD 201
Query: 327 KVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEW 386
+FEAL+ LGNTK R+N +L V++ IWA GG VA LVD +++PLP++ TED +I++W
Sbjct: 202 SIFEALNTLGNTKWRVNKSVLGVIDQIWANGGRVADLVDRDDLPLPEELDTEDESEIRKW 261
Query: 387 KYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLG 446
K++V+ KK N ERHSQRCD ELKL+VARK+K+ED FYYPHNLDFRGRAYPMHP+LNHLG
Sbjct: 262 KWKVKNVKKENNERHSQRCDIELKLAVARKLKEEDGFYYPHNLDFRGRAYPMHPYLNHLG 321
Query: 447 SDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYA-GGIEKLSYDGRLGFVENHIHDIFDSA 505
SDLCRG+LEFAEGRPLGK GL+WLKIHLANLYA GG++KLSYDGR+ F E+H+ DIFDSA
Sbjct: 322 SDLCRGILEFAEGRPLGKKGLQWLKIHLANLYATGGVDKLSYDGRVAFTEDHLDDIFDSA 381
Query: 506 DNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALG 565
D P+ G RWWL+AEDPFQCLAACINLSEALRS +P + +SH+P+HQDGSCNGLQHYAALG
Sbjct: 382 DRPLEGKRWWLQAEDPFQCLAACINLSEALRSPNPEATLSHMPVHQDGSCNGLQHYAALG 441
Query: 566 RDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKL 625
RD+L A+AVNLV +KPADVYS IA RV IM+RD+ KDP+T P+AL A+ LI+Q+DRKL
Sbjct: 442 RDKLGASAVNLVGGDKPADVYSGIAARVLQIMKRDALKDPATDPHALHARRLINQVDRKL 501
Query: 626 VKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAAR 685
VKQTVMTSVYGVTYIGARDQIK+RL+E+ + DD LF A+CYAAK TL AL E+FEAAR
Sbjct: 502 VKQTVMTSVYGVTYIGARDQIKRRLKERCAVEDDSELFAASCYAAKTTLTALEEMFEAAR 561
Query: 686 GIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
IM WLGDCAKVIA NQAV W TPLGLPVVQPY + RHL+
Sbjct: 562 SIMGWLGDCAKVIACTNQAVRWVTPLGLPVVQPYREVGRHLI 603
>Q8L6F8_9BRYO (tr|Q8L6F8) DNA-directed RNA polymerase OS=Physcomitrella patens
GN=rpoT2 PE=3 SV=1
Length = 1065
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/731 (51%), Positives = 500/731 (68%), Gaps = 23/731 (3%)
Query: 16 LRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKA 75
L +RQ++ ETEAW APNLP +SLLL WFEPL++ + EQ+A
Sbjct: 213 LHKRQVKIETEAWQQAATEYRELMTEMCRKSLAPNLPFAQSLLLSWFEPLRDGILEEQRA 272
Query: 76 HQARSKKQQASI-APNVDSLPAAKVAVIVMHKMMSLVM-ENEEGCVQLVQAAVQIGMALE 133
+ R ++ S+ P + LPA +AVI MH++M L+M + E GCV+++ AAV IG A+E
Sbjct: 273 YGNREHREHRSMYGPYMCQLPADMLAVITMHRLMGLLMCDQEHGCVKVIHAAVVIGEAVE 332
Query: 134 QEVRIHKFLEGNKSLQSKKTEADTE---ENLNNDK-EKQRK-----------FVNGLIKR 178
QEVRI + + K +SK E +T + NN++ E RK V L+K+
Sbjct: 333 QEVRIFQLMNSQK--KSKDAEGNTNSLGDVANNEELEATRKADLKSKKVVRDKVKKLVKQ 390
Query: 179 KKLKEVHVVLKQEEVS-PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFR 237
KL+ V +LK PWS KLGSRL+EL++ET++V +P Q D ++RPAF+
Sbjct: 391 NKLRRVDSILKHASTDEPWSTVIHVKLGSRLLELMLETSFVRAPACQDGDDFGELRPAFQ 450
Query: 238 HGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGH 297
H FK + Q + + YGVI+CD LVLA +++ KH WKG+++GG+
Sbjct: 451 HKFK--NHVLRQNVNRIYGVIECDQLVLAEIDQSVKHMVMPYMPMLVKPLPWKGFNEGGY 508
Query: 298 LFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGG 357
L+L S IMRT G+++Q+ + + + M+ V EAL++LG T R+N R+L+VVE +W G
Sbjct: 509 LYLKSSIMRTQGAKEQRMAVIDTPRKHMKVVVEALNVLGETGWRVNKRVLEVVEKLWKAG 568
Query: 358 GNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKM 417
G +A LV+ ++VP+P++P T D + +WK V +AK+ N ERHS RCDTELKL VA K+
Sbjct: 569 GGIADLVEADDVPIPERPDTSDKEVWHKWKVAVSQAKRTNSERHSLRCDTELKLGVADKL 628
Query: 418 KDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANL 477
DE+ FYYPHNLDFRGRAYPMHPHLNHLG+DLCRGLL FA+G+PLG SGLRW+KI LANL
Sbjct: 629 IDEEAFYYPHNLDFRGRAYPMHPHLNHLGNDLCRGLLIFADGKPLGPSGLRWIKIQLANL 688
Query: 478 YAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRS 537
Y G + K+S+D R F E+ + +I DSA+ P++G+R WL+AEDPFQ LAACI+L +AL S
Sbjct: 689 YGGSVGKMSFDDRAAFAEDRMEEILDSAERPLDGSRLWLKAEDPFQFLAACIDLRDALAS 748
Query: 538 SSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIM 597
+P + +SHLP+HQDGSCNGLQHYAALGRD + A +VNL+A +KPADVYS IA RV IM
Sbjct: 749 GNPETFVSHLPVHQDGSCNGLQHYAALGRDRIGAESVNLIAGDKPADVYSGIAERVEIIM 808
Query: 598 RRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLIT 657
+D+ K+P T NA A++L QIDRKLVKQTVMTSVYGVT+IGAR QI RL+E+ I
Sbjct: 809 EKDALKNPLTSRNAASARLLQGQIDRKLVKQTVMTSVYGVTFIGARMQILNRLKERSPIA 868
Query: 658 DDRL-LFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVV 716
D + + AACYAAKVTL ALGE+F+ AR IMSWLGDCAK+IA V WT+PLGLP+V
Sbjct: 869 VDPVDTYRAACYAAKVTLDALGEMFKEARCIMSWLGDCAKIIAAAGHTVRWTSPLGLPIV 928
Query: 717 QPYCKTERHLV 727
QPY K RHLV
Sbjct: 929 QPYRKHSRHLV 939
>A2YYV2_ORYSI (tr|A2YYV2) DNA-directed RNA polymerase OS=Oryza sativa subsp.
indica GN=OsI_30516 PE=3 SV=1
Length = 845
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/529 (65%), Positives = 413/529 (78%), Gaps = 43/529 (8%)
Query: 199 AAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVI 258
A + ++GSRLIEL+IETAY+ P +QSAD PPDIRPAF H + +R
Sbjct: 236 AIEHEVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVARE------------ 283
Query: 259 QCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMK 318
+ YDKG HLFLPSY+MRTHG+R+Q+D ++
Sbjct: 284 -------------------------------QQYDKGAHLFLPSYVMRTHGARQQRDAVR 312
Query: 319 NVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPTE 378
EQMQ VFEAL+ LG+TK R+N R+L +V+ IW+ GG +A LVD +V LP+KP TE
Sbjct: 313 RAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEKPDTE 372
Query: 379 DLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPM 438
D ++++W++ +R AKK N ERHSQRCD ELKL+VARKMKDED FYYPHNLDFRGRAYPM
Sbjct: 373 DEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYPM 432
Query: 439 HPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHI 498
HP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLYAGG++KLSYDGR+ F ENH+
Sbjct: 433 HPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHL 492
Query: 499 HDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGL 558
DIFDSAD P+ G RWWL AEDPFQCLA CINL+EALRS SP ++ISH+P+HQDGSCNGL
Sbjct: 493 EDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGL 552
Query: 559 QHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLI 618
QHYAALGRD+L A AVNLVA EKPADVY+ IA RV +IM+ D+ KDP+T P+A A++L+
Sbjct: 553 QHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLLL 612
Query: 619 DQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALG 678
DQ+DRKLVKQTVMTSVYGVTY+GAR+QIK+RL+E+ +I DD LF+A+CYAAKVTL ALG
Sbjct: 613 DQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTALG 672
Query: 679 EVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
E+F+AAR IM+WLGDCAKVIA EN+ V WTTPLGLPVVQPY K RHL+
Sbjct: 673 EMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLI 721
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ LRRRQI+ ETEAW APNLP VKSL LGWFEPL++ + AE
Sbjct: 119 YAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAE 178
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMA 131
Q+ R + AS A + LPA +AVI MHK+M L+M +G V+++QAA QIG A
Sbjct: 179 QELVGERGAR--ASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEA 236
Query: 132 LEQEV 136
+E EV
Sbjct: 237 IEHEV 241
>M4CIH6_BRARP (tr|M4CIH6) DNA-directed RNA polymerase OS=Brassica rapa subsp.
pekinensis GN=Bra004010 PE=3 SV=1
Length = 902
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/721 (50%), Positives = 480/721 (66%), Gaps = 57/721 (7%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ +L++RQ+ ETE W APNLP VKSL LGWFEPL++A+ A+
Sbjct: 109 YHSLKQRQVRLETEEWERAARECREIIEDMCEQKLAPNLPYVKSLFLGWFEPLRDAIRAD 168
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQIGM 130
A + K+ + AP ++ LPA +AVI MHKMM+L+M N EG V++V AA +G
Sbjct: 169 LDAFKV--KRGKIPYAPYMELLPADMMAVITMHKMMALLMTNAEGVGVVRVVNAATNVGE 226
Query: 131 ALEQEVRIHKFLE-GNKSLQSKKTEADTEENLNNDKE--KQRKFVNGLIKRKKLKEVHVV 187
A+EQE RI F++ G + TEA KE K +K +N L+K+ K++ V +
Sbjct: 227 AIEQEARIKSFMQKGKMKNATSNTEAVDALGETGTKEAVKLKKQINTLLKKHKVRRVSGI 286
Query: 188 LK-QEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRS 246
+K + PW + AQ K+G+RLI+LL+ETAY+ P Q D PP+IRPAF+ K +
Sbjct: 287 VKAHDSFKPWGQEAQVKVGARLIQLLLETAYIQPPAEQFDDGPPEIRPAFKQTSKNVTLE 346
Query: 247 PGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMR 306
K+ + YG I+CDPL+ GL+K A+H + W GYD+G H FLPSY+MR
Sbjct: 347 -NTKLSRRYGCIECDPLIRKGLDKSARHVVIPYLPMLIPPRNWTGYDQGAHFFLPSYLMR 405
Query: 307 THGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC 366
T+GS++Q+ V+ Q++ VF+ALD LGNTK RIN ++L +V+ IWA GG + GLVD
Sbjct: 406 TNGSKQQRIVVNKTPKAQLEPVFKALDTLGNTKWRINKKVLSLVDRIWANGGRLGGLVDR 465
Query: 367 ENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYP 426
++VP+P++P ED +++++WK++ ++A K N ERHSQRCD ELKL VARKMK+E+ FY+P
Sbjct: 466 DDVPIPEEPDGEDQEELKQWKWKFKEANKENSERHSQRCDVELKLEVARKMKEEEGFYFP 525
Query: 427 HNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLS 486
HN+DFRGRAYPMHP+LNHLGSDLCRG+LEF EG+PLG+SGLRWLK+H+ANLYAGG++K S
Sbjct: 526 HNVDFRGRAYPMHPYLNHLGSDLCRGILEFCEGKPLGESGLRWLKVHIANLYAGGVDKGS 585
Query: 487 YDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISH 546
ALRSS P + ISH
Sbjct: 586 LS---------------------------------------------ALRSSVPEAAISH 600
Query: 547 LPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPS 606
+PIHQDGSCNGLQHYAALGRD+ AAAVNL EKPAD+Y++IA RV IM++D+ +DP
Sbjct: 601 IPIHQDGSCNGLQHYAALGRDKTGAAAVNLFTGEKPADIYADIAARVLKIMQKDAEEDPE 660
Query: 607 TFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAA 666
TFP AK+++DQ+DRKLVKQTVMT+VYGVTY GAR+QIKKRL+E+G DD F AA
Sbjct: 661 TFP---YAKLMLDQVDRKLVKQTVMTTVYGVTYSGARNQIKKRLKERGAFADDSQNFHAA 717
Query: 667 CYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHL 726
YAA+VT AL E+F AAR IM W G+CAK+IA +N+ V WTTPLGLPVVQPY + RHL
Sbjct: 718 YYAARVTTNALEEMFGAARAIMIWFGECAKIIASQNKPVCWTTPLGLPVVQPYRQPGRHL 777
Query: 727 V 727
V
Sbjct: 778 V 778
>N1LJC9_9BRYO (tr|N1LJC9) DNA-dependent RNA polymerase OS=Physcomitrella patens
GN=rpoTm PE=2 SV=1
Length = 1010
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/735 (50%), Positives = 488/735 (66%), Gaps = 35/735 (4%)
Query: 16 LRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKA 75
LR+RQI ETEAW APNLP + LLLGW+EPL++A+ EQ+A
Sbjct: 162 LRQRQIINETEAWTNAEAQYEEFIAEMCRKKLAPNLPASQLLLLGWYEPLRDAIAEEQRA 221
Query: 76 H-QARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEE-GCVQLVQAAVQIGMALE 133
+ + ++AS P + LP +++AVI MH +++LVM NE+ G V+++QAA+ IG A+E
Sbjct: 222 FSELEFRGERASYGPFLCQLPPSQLAVITMHCLLALVMSNEKMGYVKVIQAALHIGEAVE 281
Query: 134 QEVRIHKFL-----------------EGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLI 176
QEV I K +G +++S K E T L G+
Sbjct: 282 QEVLIRKLRIGKAKKNETKRKGITKDDGISTIESGKVELTTSPELPTQ-------ATGMQ 334
Query: 177 KRKKLKEVHVVLKQEEVS-PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTP---PDI 232
K +KL+ +L++ S PW AK+GSRL+EL +ETA + P +D P
Sbjct: 335 KLRKLRLWRSMLQKASGSDPWGPTIYAKVGSRLLELFMETAVIRVP----SDDPHVDASF 390
Query: 233 RPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGY 292
P F+H K + G+ +GV++C+PLVL ++K K+ K WKG+
Sbjct: 391 EPVFQHTNKKFVCTSGRSS-TGFGVVECNPLVLEQIDKSVKYVIMPYMPMVSKPKHWKGF 449
Query: 293 DKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVES 352
GG+LFL S IMRTHGS++Q D+ KN E M+K+F+AL++LG T R+N +L V+E
Sbjct: 450 HDGGYLFLKSSIMRTHGSKEQYDIFKNTPRENMKKIFQALNVLGETGWRVNKPVLAVLEQ 509
Query: 353 IWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLS 412
IW GG +A LVD E+V +P KP T +L +++ W+ V K+ N ER+S RCD ELKL+
Sbjct: 510 IWKEGGRLANLVDAEDVLVPAKPETNNLDELKSWRREVGIVKRTNYERYSLRCDVELKLA 569
Query: 413 VARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKI 472
VARK+ +ED FY PHNLDFRGRAYPMHP+LNHLGSD+CRG+LEFA+GRPLG++GLRWLKI
Sbjct: 570 VARKLVNEDAFYLPHNLDFRGRAYPMHPNLNHLGSDMCRGVLEFAKGRPLGETGLRWLKI 629
Query: 473 HLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLS 532
HLANLY G I KLS+D R+ V+ H+ D+FDSA+NP+NGNRWWL+AEDPFQ LAACI++
Sbjct: 630 HLANLYGGSISKLSFDARVAHVDTHMDDVFDSAENPMNGNRWWLKAEDPFQFLAACIDIR 689
Query: 533 EALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVR 592
A++S +P + S LP+HQDGSCNGLQHYAALGRD + A VNL+A + PADVYS IA R
Sbjct: 690 NAVKSGNPKTYNSFLPVHQDGSCNGLQHYAALGRDRIGAGTVNLLAGDVPADVYSAIADR 749
Query: 593 VHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEE 652
VH + + + K+P +A +A+VL+ QIDRKLVKQT+MTSVYGVT++GAR QI RL+E
Sbjct: 750 VHRTIEKAALKNPEASKHAAIARVLLGQIDRKLVKQTIMTSVYGVTFVGARIQILNRLKE 809
Query: 653 KGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLG 712
+G+I D LF A+ YAAKVTL ALGE F AR IM+WL +CA++IA+ +V WTTPLG
Sbjct: 810 RGIIQDGGELFKASVYAAKVTLDALGEGFREARCIMNWLSECAQIIAHSGNSVKWTTPLG 869
Query: 713 LPVVQPYCKTERHLV 727
L VVQPY RHLV
Sbjct: 870 LEVVQPYRNPSRHLV 884
>A9TJ21_PHYPA (tr|A9TJ21) DNA-directed RNA polymerase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_222742 PE=3 SV=1
Length = 861
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/735 (50%), Positives = 488/735 (66%), Gaps = 35/735 (4%)
Query: 16 LRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKA 75
LR+RQI ETEAW APNLP + LLLGW+EPL++A+ EQ+A
Sbjct: 13 LRQRQIINETEAWTNAEAQYEEFIAEMCRKKLAPNLPASQLLLLGWYEPLRDAIAEEQRA 72
Query: 76 H-QARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEE-GCVQLVQAAVQIGMALE 133
+ + ++AS P + LP +++AVI MH +++LVM NE+ G V+++QAA+ IG A+E
Sbjct: 73 FSELEFRGERASYGPFLCQLPPSQLAVITMHCLLALVMSNEKMGYVKVIQAALHIGEAVE 132
Query: 134 QEVRIHKFL-----------------EGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLI 176
QEV I K +G +++S K E T L G+
Sbjct: 133 QEVLIRKLRIGKAKKNETKRKGITKDDGISTIESGKVELTTSPELPTQ-------ATGMQ 185
Query: 177 KRKKLKEVHVVLKQEEVS-PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTP---PDI 232
K +KL+ +L++ S PW AK+GSRL+EL +ETA + P +D P
Sbjct: 186 KLRKLRLWRSMLQKASGSDPWGPTIYAKVGSRLLELFMETAVIRVP----SDDPHVDASF 241
Query: 233 RPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGY 292
P F+H K + G+ +GV++C+PLVL ++K K+ K WKG+
Sbjct: 242 EPVFQHTNKKFVCTNGRSS-TGFGVVECNPLVLEQIDKSVKYVIMPYMPMVSKPKHWKGF 300
Query: 293 DKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVES 352
GG+LFL S IMRTHGS++Q D+ KN E M+K+F+AL++LG T R+N +L V+E
Sbjct: 301 HDGGYLFLKSSIMRTHGSKEQYDIFKNTPRENMKKIFQALNVLGETGWRVNKPVLAVLEQ 360
Query: 353 IWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLS 412
IW GG +A LVD E+V +P KP T +L +++ W+ V K+ N ER+S RCD ELKL+
Sbjct: 361 IWKEGGRLANLVDAEDVLVPAKPETNNLDELKSWRREVGIVKRTNYERYSLRCDVELKLA 420
Query: 413 VARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKI 472
VARK+ +ED FY PHNLDFRGRAYPMHP+LNHLGSD+CRG+LEFA+GRPLG++GLRWLKI
Sbjct: 421 VARKLVNEDAFYLPHNLDFRGRAYPMHPNLNHLGSDMCRGVLEFAKGRPLGETGLRWLKI 480
Query: 473 HLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLS 532
HLANLY G I KLS+D R+ V+ H+ D+FDSA+NP+NGNRWWL+AEDPFQ LAACI++
Sbjct: 481 HLANLYGGSISKLSFDARVAHVDTHMDDVFDSAENPMNGNRWWLKAEDPFQFLAACIDIR 540
Query: 533 EALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVR 592
A++S +P + S LP+HQDGSCNGLQHYAALGRD + A VNL+A + PADVYS IA R
Sbjct: 541 NAVKSGNPKTYNSFLPVHQDGSCNGLQHYAALGRDRIGAGTVNLLAGDVPADVYSAIADR 600
Query: 593 VHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEE 652
VH + + + K+P +A +A+VL+ QIDRKLVKQT+MTSVYGVT++GAR QI RL+E
Sbjct: 601 VHRTIEKAALKNPEASKHAAIARVLLGQIDRKLVKQTIMTSVYGVTFVGARIQILNRLKE 660
Query: 653 KGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLG 712
+G+I D LF A+ YAAKVTL ALGE F AR IM+WL +CA++IA+ +V WTTPLG
Sbjct: 661 RGIIQDGGELFKASVYAAKVTLDALGEGFREARCIMNWLSECAQIIAHSGNSVKWTTPLG 720
Query: 713 LPVVQPYCKTERHLV 727
L VVQPY RHLV
Sbjct: 721 LEVVQPYRNPSRHLV 735
>M7YL10_TRIUA (tr|M7YL10) DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial OS=Triticum urartu
GN=TRIUR3_29385 PE=4 SV=1
Length = 854
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/688 (54%), Positives = 476/688 (69%), Gaps = 68/688 (9%)
Query: 15 ALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQK 74
+LR+RQI ETEAW APNLP VKSL LGWFEPL++ + AEQ+
Sbjct: 44 SLRQRQIRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQE 103
Query: 75 AHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMALE 133
R + AS AP + LPA +AVI MHK+M L+M +G V+++QAA QIG A+E
Sbjct: 104 LVSERGTR--ASHAPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAVE 161
Query: 134 QEVRIHKFLEGNKSLQSKKTEADTEE---NLNNDKEKQRKFVNGLIKRKKLKEV-HVVLK 189
EVRIHKFLE K +K+ + E ++ ++E+ RK V L+K++K+++V H+V K
Sbjct: 162 HEVRIHKFLEKTKKKNTKEVDKVVEAVDADIAKEQERLRKKVTDLMKKQKIRQVRHLVKK 221
Query: 190 QEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQ 249
Q+ PW + A AK+GSRLIEL IETA++ P +QS D+ P+IRPAF H + +R Q
Sbjct: 222 QDSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSGDSTPEIRPAFTHEMRTVARE--Q 279
Query: 250 KILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHG 309
+ + YGVI+CDPLV GL++ A
Sbjct: 280 QKSRRYGVIKCDPLVRQGLDRTA------------------------------------- 302
Query: 310 SRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENV 369
D + + K +KV +D + ++ GRL D LVD +V
Sbjct: 303 ----LDNLGSTKWRVNKKVLSIVDRIWSS----GGRLAD--------------LVDRADV 340
Query: 370 PLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNL 429
LP+KP TED ++++W++ +R AKK N ERHSQRCD ELKL+VARKMK+E FYYPHNL
Sbjct: 341 SLPEKPDTEDEAELKKWRWSMRSAKKENSERHSQRCDVELKLAVARKMKEEAGFYYPHNL 400
Query: 430 DFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDG 489
DFRGRAYPMHP+LNHLGSDLCRG+LEF+EGRPLG+SGLRWLKIHLANLY GG++KLSYDG
Sbjct: 401 DFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIHLANLYGGGVDKLSYDG 460
Query: 490 RLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPI 549
R+ F ENH+ DIFDSA+ P+ G RWWL AEDPFQCLA C++L+EALRS SP +VISH+P+
Sbjct: 461 RIAFTENHLDDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNEALRSPSPETVISHIPV 520
Query: 550 HQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFP 609
HQDGSCNGLQHYAALGRD+L A AVNLV+ EKPADVYS IA RV +IM+RD+ KDP+
Sbjct: 521 HQDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARVVEIMKRDAQKDPAKDA 580
Query: 610 NALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYA 669
+A A++L+DQ+DRKLVKQTVMTSVYGVTY+GAR+QIK+RL+E+G+I DD LF A+CYA
Sbjct: 581 DAARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIADDSELFGASCYA 640
Query: 670 AKVTLAALGEVFEAARGIMSWLGDCAKV 697
AKVTL ALGE+FEAAR IM+WLGDCAK+
Sbjct: 641 AKVTLTALGEMFEAARSIMTWLGDCAKI 668
>B9T5S6_RICCO (tr|B9T5S6) DNA-directed RNA polymerase OS=Ricinus communis
GN=RCOM_0196710 PE=3 SV=1
Length = 589
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/436 (75%), Positives = 376/436 (86%)
Query: 292 YDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVE 351
YDKG HLFLPSY+MRTHG+R+Q++ +K EQ+Q VFEALD LG+TK RIN R+L VV+
Sbjct: 30 YDKGAHLFLPSYVMRTHGARQQREAVKITPREQLQPVFEALDTLGSTKWRINKRILGVVD 89
Query: 352 SIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKL 411
IW GG + LVD +VPLP+KP TED +++WK+++R AKK N ERHSQRCDTELKL
Sbjct: 90 RIWNSGGRLGDLVDRNDVPLPEKPETEDEALVRKWKWKLRAAKKENRERHSQRCDTELKL 149
Query: 412 SVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLK 471
+VARKMKDE+ FYYPHNLDFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLK
Sbjct: 150 AVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLK 209
Query: 472 IHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINL 531
IHLANL+AGG++KLSYDGR+ F ENH+ DIFDSAD P+ G RWWL AEDPFQCLA CI+L
Sbjct: 210 IHLANLFAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAVCIDL 269
Query: 532 SEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAV 591
+EALRSSSP + ISH+PIHQDGSCNGLQHYAALGRD+L AAAVNLVA EKPADVYS IAV
Sbjct: 270 TEALRSSSPETFISHVPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAV 329
Query: 592 RVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLE 651
RV DIMR+D+ KDP FP+AL AK+LI Q+DRKLVKQTVMTSVYGVTYIGARDQIK+RL+
Sbjct: 330 RVLDIMRKDAQKDPKVFPDALHAKILISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 389
Query: 652 EKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPL 711
E+G I DD +F A+CYAAKVTL ALGE+FEAAR IMSWLG+CAK+IA EN+ V WTTPL
Sbjct: 390 ERGFIADDTEIFVASCYAAKVTLTALGEMFEAARSIMSWLGECAKIIASENEPVRWTTPL 449
Query: 712 GLPVVQPYCKTERHLV 727
GLPVVQPY RHL+
Sbjct: 450 GLPVVQPYRNFGRHLI 465
>M0XJG5_HORVD (tr|M0XJG5) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 777
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/614 (57%), Positives = 451/614 (73%), Gaps = 10/614 (1%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ +LR+RQI ETEAW APNLP VKSL LGWFEPL++ + AE
Sbjct: 162 YVSLRQRQIRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAE 221
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMA 131
Q+ R + AS AP + LPA +AVI MHK+M L+M +G V+++QAA QIG A
Sbjct: 222 QELVGERGTR--ASHAPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEA 279
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTE---ENLNNDKEKQRKFVNGLIKRKKLKEV-HVV 187
+E EVRIHKFLE K +K+ + E ++ +++ RK V L+K++K+++V H+V
Sbjct: 280 VEHEVRIHKFLEKTKKKNTKEVDKVVEPGDSDIAKEQQLLRKKVTDLMKKQKIRQVRHLV 339
Query: 188 LKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSP 247
KQ+ PW + A AK+GSRLIEL IETA++ P +QS D+ P+IRPAF H + +R
Sbjct: 340 KKQDSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSGDSTPEIRPAFTHEMRTVAR-- 397
Query: 248 GQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT 307
++ + YGVI+CDPLV GL++ AKH W GYDKG HLFLPSY+MRT
Sbjct: 398 -EQKSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPINWTGYDKGAHLFLPSYVMRT 456
Query: 308 HGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE 367
HG+R+Q++ +K EQMQ +FEALD LG+TK R+N R+L +V+ IW+ GG +A LVD
Sbjct: 457 HGARQQREAVKKAPKEQMQTIFEALDNLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRA 516
Query: 368 NVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPH 427
+V LP+KP TED ++++W++ +R AKK N ERHSQRCD ELKL+VARKMK+E FYYPH
Sbjct: 517 DVSLPEKPDTEDEAELKKWRWSMRSAKKENSERHSQRCDVELKLAVARKMKEEVGFYYPH 576
Query: 428 NLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSY 487
NLDFRGRAYPMHP+LNHLGSDLCRG+LEF+EGRPLG+SGLRWLKIHLANLY GG++KLSY
Sbjct: 577 NLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIHLANLYGGGVDKLSY 636
Query: 488 DGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHL 547
DGR+ F ENH+ DIFDSA+ P+ G RWWL AEDPFQCLA C++L+EALRSSSP +VISH+
Sbjct: 637 DGRIAFTENHLEDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNEALRSSSPETVISHI 696
Query: 548 PIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPST 607
P+HQDGSCNGLQHYAALGRD+L A AVNLV+ EKPADVYS IA RV +IM+RD+ KDP+
Sbjct: 697 PVHQDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARVVEIMKRDAQKDPAK 756
Query: 608 FPNALLAKVLIDQI 621
+A A++L+DQ+
Sbjct: 757 DADAARARLLVDQV 770
>B2RFX8_SELML (tr|B2RFX8) DNA-directed RNA polymerase (Precursor) OS=Selaginella
moellendorffii GN=rpoT PE=3 SV=1
Length = 1002
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/714 (48%), Positives = 471/714 (65%), Gaps = 16/714 (2%)
Query: 19 RQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKAHQA 78
RQ + E +AW APNLP KSL++ WFEP+++ + E KA +
Sbjct: 175 RQQKLELDAWDAAVREYRKILVEMCRKKLAPNLPFAKSLMVSWFEPVRDEIAKELKAIEK 234
Query: 79 RSKKQQAS-IAPNVDS--LPAAKVAVIVMHKMMSLVMEN-EEGCVQLVQAAVQIGMALEQ 134
+ S P + L A +AVI MH++++L+M++ + GC++L AV IG A+EQ
Sbjct: 235 EEPGEDRSHYGPLLKGAGLTADVLAVITMHRLVALMMQDVDSGCIRLANTAVLIGDAVEQ 294
Query: 135 EVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVS 194
E++I + L+ K + + + + K +I+R + V +LK + S
Sbjct: 295 EIKIRRALKKRKPKELAEEAEPPTPEEEKKEYLKDKLRRAIIERPR--NVKEILKSLDPS 352
Query: 195 -PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILK 253
PW QAKLG RLI++++ ++++ PV+ + +IRPAFRH K P +L+
Sbjct: 353 QPWPSFIQAKLGCRLIDIMMSNSHINVPVSDCPEDGTEIRPAFRHVLK----VPKGGLLR 408
Query: 254 NYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQ 313
+YG I CDP + ++ AK + WKGY G +L L S IMRTHGS++Q
Sbjct: 409 SYGAIVCDPHLRGRIDDSAKFIVMPYMPMLIPPRAWKGYHNGAYLHLRSVIMRTHGSKQQ 468
Query: 314 QDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPD 373
++ ++N Q+Q+VF ALD LG +IN + +V+E +W+ GG + GLVD ++VPLP
Sbjct: 469 REAVRNTPRAQLQQVFRALDTLGAASWKINKEVFEVIEKLWSAGGGIGGLVDRKDVPLPP 528
Query: 374 KPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRG 433
KP TED +++ W+ K K+ N ER+SQRCD ELKL+VAR +KDE+CFYYPHNLDFRG
Sbjct: 529 KPNTEDEAEMRSWRKVFYKGKRTNSERNSQRCDLELKLAVARSLKDEECFYYPHNLDFRG 588
Query: 434 RAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGF 493
RAYPMH HLNHLGSD+CRG+L FA+GRPLG +GLRWLKIH+AN++A G +KL +DGR+ F
Sbjct: 589 RAYPMHAHLNHLGSDVCRGMLLFAKGRPLGPTGLRWLKIHIANVFANGADKLPFDGRVAF 648
Query: 494 VENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDG 553
E+++ + SA+ P+ NRWWL+AEDPFQCLAACI+L A+ S +P ISHLP+HQDG
Sbjct: 649 AESNLEHVVASANQPLK-NRWWLKAEDPFQCLAACIDLRNAMHSPNPEYYISHLPVHQDG 707
Query: 554 SCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALL 613
SCNGLQHYAALGRD+ A AVNL+ + PADVYS IA RV ++ D+ KDP+ A+
Sbjct: 708 SCNGLQHYAALGRDKTGARAVNLIGADYPADVYSGIAARVRTLVEEDARKDPA----AVY 763
Query: 614 AKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVT 673
AK+L+ +DRKLVKQTVMTSVYGVTY+GAR+QI RL +KG I D+ L+ CYAAKVT
Sbjct: 764 AKLLVGHVDRKLVKQTVMTSVYGVTYVGARNQITNRLRDKGFILDEPTLYRTGCYAAKVT 823
Query: 674 LAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
L ALGE+F AR IM+WLG CAKVIA + +V W TPLGLPVVQPY + RH+V
Sbjct: 824 LNALGEMFGEARLIMNWLGQCAKVIANDGDSVRWITPLGLPVVQPYRRPGRHVV 877
>D8R5B1_SELML (tr|D8R5B1) DNA-directed RNA polymerase (Fragment) OS=Selaginella
moellendorffii GN=SELMODRAFT_108034 PE=3 SV=1
Length = 831
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/717 (48%), Positives = 472/717 (65%), Gaps = 16/717 (2%)
Query: 16 LRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKA 75
L RQ + E +AW APNLP KSL++ WFEP+++ + E KA
Sbjct: 1 LFNRQQKLELDAWDAAVREYRKILVEMCRKKLAPNLPFAKSLMVSWFEPVRDEIAKELKA 60
Query: 76 HQARSKKQQAS-IAPNVDS--LPAAKVAVIVMHKMMSLVMEN-EEGCVQLVQAAVQIGMA 131
+ + S P + L A +AVI MH++++L+M++ + GC++L AV IG A
Sbjct: 61 IEKEEPGEDRSHYGPLLKGAGLTADVLAVITMHRLVALMMQDVDSGCIRLANTAVLIGDA 120
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQE 191
+EQE++I + L+ K + + + + K +I+R + V +LK
Sbjct: 121 VEQEIKIRRALKKRKPKELAEEAEPPTPEEEKKEYLKDKLRRAIIERPR--NVKEILKSL 178
Query: 192 EVS-PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQK 250
+ S PW QAKLG RLI++++ ++++ PV+ + +IRPAFRH K P
Sbjct: 179 DPSQPWPSFIQAKLGCRLIDIMMSNSHINVPVSDCPEDGTEIRPAFRHVLK----VPKGG 234
Query: 251 ILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGS 310
+L++YG I CDP + ++ AK + WKGY G +L L S IMRTHGS
Sbjct: 235 LLRSYGAIVCDPHLRGRIDDSAKFIVMPYMPMLIPPRAWKGYHNGAYLHLRSVIMRTHGS 294
Query: 311 RKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVP 370
++Q++ ++N Q+Q+VF ALD LG +IN + +V+E +W+ GG + GLVD ++VP
Sbjct: 295 KQQREAVRNTPRAQLQQVFRALDTLGAASWKINKEVFEVIEKLWSAGGGIGGLVDRKDVP 354
Query: 371 LPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLD 430
LP KP TED +++ W+ K K+ N ER+SQRCD ELKL+VAR +KDE+CFYYPHNLD
Sbjct: 355 LPPKPNTEDEAEMRSWRKVFYKGKRTNSERNSQRCDLELKLAVARSLKDEECFYYPHNLD 414
Query: 431 FRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGR 490
FRGRAYPMH HLNHLGSD+CRG+L FA+GRPLG +GLRWLKIH+AN++A G +KL +DGR
Sbjct: 415 FRGRAYPMHAHLNHLGSDVCRGMLLFAKGRPLGPTGLRWLKIHIANVFANGADKLPFDGR 474
Query: 491 LGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIH 550
+ F E+++ + SA+ P+ NRWWL+AEDPFQCLAACI+L A+ S +P ISHLP+H
Sbjct: 475 VAFAESNLEHVVASANQPLK-NRWWLKAEDPFQCLAACIDLRNAMHSPNPEYYISHLPVH 533
Query: 551 QDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPN 610
QDGSCNGLQHYAALGRD+ A AVNL+ + PADVYS IA RV ++ D+ KDP+
Sbjct: 534 QDGSCNGLQHYAALGRDKTGARAVNLIGADYPADVYSGIAARVRTLVEEDARKDPA---- 589
Query: 611 ALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAA 670
A+ AK+L+ +DRKLVKQTVMTSVYGVTY+GAR+QI RL +KG I D+ L+ CYAA
Sbjct: 590 AVYAKLLVGHVDRKLVKQTVMTSVYGVTYVGARNQITNRLRDKGFILDEPTLYRTGCYAA 649
Query: 671 KVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
KVTL ALGE+F AR IM+WLG CAKVIA + +V W TPLGLPVVQPY + RH+V
Sbjct: 650 KVTLNALGEMFGEARLIMNWLGQCAKVIANDGDSVRWITPLGLPVVQPYRRPGRHVV 706
>M8C8F6_AEGTA (tr|M8C8F6) DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial OS=Aegilops tauschii
GN=F775_25821 PE=4 SV=1
Length = 884
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/733 (51%), Positives = 478/733 (65%), Gaps = 111/733 (15%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ +LR+RQI ETEAW APNLP VKSL LGWFEPL++ + AE
Sbjct: 91 YVSLRQRQIRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAE 150
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMA 131
Q+ R + AS AP + LPA +AVI MHK+M L+M +G V+++QAA QIG A
Sbjct: 151 QELVSQRGTR--ASHAPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEA 208
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTEE---NLNNDKEKQRKFVNGLIKRKKLKEV-HVV 187
+E EVRIHKFLE K +K+ + E ++ ++E+ RK V L+K++K+++V H+V
Sbjct: 209 VEHEVRIHKFLEKTKKKNTKEVDKVVEAVDADIAKEQERLRKKVTDLMKKQKIRQVRHLV 268
Query: 188 LKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSP 247
KQ+ PW + A AK+GSRLIEL IETA++ P +QS D+ P+IRPAF H + +R
Sbjct: 269 KKQDSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSGDSTPEIRPAFTHEMRTVARE- 327
Query: 248 GQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT 307
Q+ + YGVI+CDPLV GL++ A
Sbjct: 328 -QQKSRRYGVIKCDPLVRQGLDRTA----------------------------------- 351
Query: 308 HGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE 367
D + + K +KV +D + ++ GRL D LVD
Sbjct: 352 ------LDNLGSTKWRVNKKVLSIVDRIWSS----GGRLAD--------------LVDRA 387
Query: 368 NVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPH 427
+V LP+KP TED ++++W++ +R AKK N ERHSQRCD ELKL+VARKMK+E FYYPH
Sbjct: 388 DVSLPEKPDTEDEAELKKWRWSMRSAKKENSERHSQRCDVELKLAVARKMKEEAGFYYPH 447
Query: 428 NLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSY 487
NLDFRGRAYPMHP+LNHLGSDLCRG+LEF+EGRPLG+SGLRWLKIHLANLY GG++KLSY
Sbjct: 448 NLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIHLANLYGGGVDKLSY 507
Query: 488 DGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHL 547
DGR+ F ENH+ DIFDSA+ P+ G RWWL AEDPFQCLA C++L+EALRS SP +VISH+
Sbjct: 508 DGRIAFTENHLEDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNEALRSPSPETVISHI 567
Query: 548 PIHQ-----------------DGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIA 590
P+HQ DGSCNGLQHYAALGRD+L A AVNLV+ EKPADVYS IA
Sbjct: 568 PVHQQQLHECRKDIQVQSKEEDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIA 627
Query: 591 VRVHDIMRRDSNKDPST-------------FPNALLAKV---------LID----QIDRK 624
RV +IM+RD+ KDP+ F +A+L + LID Q+DRK
Sbjct: 628 ARVVEIMKRDAQKDPAKDADAARARLLVDQFVSAILHDLISVIAFSWYLIDSPVIQVDRK 687
Query: 625 LVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAA 684
LVKQTVMTSVYGVTY+GAR+QIK+RL+E+G+I +D LF A+CYAAKVTL ALGE+FEAA
Sbjct: 688 LVKQTVMTSVYGVTYVGAREQIKRRLKERGVIAEDSELFGASCYAAKVTLTALGEMFEAA 747
Query: 685 RGIMSWLGDCAKV 697
R IM+WLGDCAK+
Sbjct: 748 RSIMTWLGDCAKI 760
>M0ZLT1_SOLTU (tr|M0ZLT1) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG401001383 PE=4 SV=1
Length = 672
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/584 (57%), Positives = 428/584 (73%), Gaps = 8/584 (1%)
Query: 13 FDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
+ AL+RRQ++ ET+AW APNLP VKSL LGWFEPL++ + E
Sbjct: 93 YPALKRRQVKIETQAWELAAKEYRELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAQE 152
Query: 73 QK-AHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMEN-EEGCVQLVQAAVQIGM 130
Q+ Q +SK A+ + LPA +AVI MHK+M L+M E G ++VQAA+ IG
Sbjct: 153 QELCIQGKSK---AAYSKYFHLLPADMMAVITMHKLMGLLMTGGEHGNARVVQAALTIGD 209
Query: 131 ALEQEVRIHKFLEGNKSLQSKKT-EADTEENLNNDKEKQRKFVNGLIKRKKLKEVH-VVL 188
A+EQEVRIHKFLE + +++K + + E+ +++K K V L+K++KL+ V+ +V
Sbjct: 210 AIEQEVRIHKFLEKTEKHKAEKDRKMEDGEHATLEQKKLHKKVTSLMKKQKLRAVNQIVR 269
Query: 189 KQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPG 248
Q++ PW + A+AK+GSRLIE L++TAY+ SP +Q A PPDIRPAF H + ++
Sbjct: 270 SQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRPAFIHSTRTVAKET- 328
Query: 249 QKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTH 308
+ + YGVIQCD LV GLE+ A+H KW GYDKGGHL+LPSY+MRTH
Sbjct: 329 KSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTH 388
Query: 309 GSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCEN 368
G+R+Q++ +K Q++ VFEALD LG+TK RIN R+L VV+ IWAGGG +A LVD ++
Sbjct: 389 GARQQREAVKRASRNQLRPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRLADLVDRDD 448
Query: 369 VPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHN 428
PLP++P TED +W+++V+ KK N ERHSQRCD ELKL+VA +MKDE+ F+YPHN
Sbjct: 449 APLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAHRMKDEEGFFYPHN 508
Query: 429 LDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYD 488
+DFRGRAYPMHPHLNHLGSD+CRG+LEFA GRPLG+SGLRWLKIHLANL+AGG++KLS D
Sbjct: 509 VDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGESGLRWLKIHLANLFAGGVDKLSLD 568
Query: 489 GRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLP 548
GR+ F E+H+ DIFDSAD P+ G RWWL AEDPFQCLA CINLSEA+RSSSP +VISH+P
Sbjct: 569 GRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETVISHIP 628
Query: 549 IHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVR 592
+HQDGSCNGLQHYAALGRD+L AAAVNLVA EKPADVYS IA R
Sbjct: 629 VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAAR 672
>K7L8Z9_SOYBN (tr|K7L8Z9) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 690
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/586 (57%), Positives = 422/586 (72%), Gaps = 14/586 (2%)
Query: 18 RRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKAHQ 77
RRQI++ETEAW APNLP +KSL LGWFEPL+ A+ A+Q+
Sbjct: 108 RRQIKSETEAWAEAAREYEELLEDMREQKLAPNLPYMKSLFLGWFEPLRNAILADQEL-- 165
Query: 78 ARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEG--CVQLVQAAVQIGMALEQE 135
+ K + S AP + LPA +AV+ MHK+M+L+M N G +++QAA QIG A+E E
Sbjct: 166 CKDSKCRMSHAPYFNDLPADMMAVVTMHKLMALLMTNTNGVGTARVIQAACQIGEAVENE 225
Query: 136 VRIHKFLEGNKSLQS------KKTEADTEENLNNDKEKQR--KFVNGLIKR-KKLKEVHV 186
RI++F++ K +S ++ TEEN DK++ R K V L+K+ KKL+ + +
Sbjct: 226 ARIYQFMKREKENKSSHVVPVEQRGELTEENGEMDKKQSRLRKRVAALMKKQKKLQAMGI 285
Query: 187 VLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRS 246
V Q++ W + AQ K+GSRL++LLIETAY+ P N D PPDIRPAF+H K S S
Sbjct: 286 VRGQDDWKAWGQEAQVKVGSRLMQLLIETAYIQPPANLIGDGPPDIRPAFKHTLKTLS-S 344
Query: 247 PGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMR 306
QK + YGVI+CDPLV GLEK A+H W GYDKG +LFLPSY+MR
Sbjct: 345 ESQKETRRYGVIECDPLVQNGLEKSARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMR 404
Query: 307 THGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC 366
HG+++Q++ +K Q+ VFEAL+ LG+TK R+N R+L V++ IWA GG +A LVD
Sbjct: 405 VHGAKQQREAVKRAPKSQLDPVFEALNTLGSTKWRVNKRVLCVIDQIWANGGRLADLVDR 464
Query: 367 ENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYP 426
ENVP P +P T+D +I++WK++V+ KK N ERHSQRCD ELKL+VARKMKDE+ FYYP
Sbjct: 465 ENVPEPKEPDTKDEAEIRKWKWKVKAVKKENNERHSQRCDIELKLAVARKMKDEEGFYYP 524
Query: 427 HNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLS 486
HNLDFRGRAYPMHP+LNHLGSDLCRG+LEF+EGRPLGKSGL WLKIHLANLYAGG++KLS
Sbjct: 525 HNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLCWLKIHLANLYAGGVDKLS 584
Query: 487 YDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISH 546
YDGR+ F ENH+ DIFDSAD P+ G RWWL+AEDPFQCLAAC NLSEALRS +P + ISH
Sbjct: 585 YDGRIEFTENHLDDIFDSADRPLEGKRWWLQAEDPFQCLAACTNLSEALRSPTPETTISH 644
Query: 547 LPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVR 592
+P+HQDGSCNGLQHYAALGRD+L AAAVNLV ++PADVYS IA R
Sbjct: 645 MPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGDQPADVYSGIAAR 690
>G7KS02_MEDTR (tr|G7KS02) DNA-directed RNA polymerase OS=Medicago truncatula
GN=MTR_7g017440 PE=3 SV=1
Length = 895
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 305/440 (69%), Positives = 370/440 (84%)
Query: 290 KGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDV 349
+ +DKGG+LFLPSY+MRTHG ++Q++ +K V +Q++ VFEALD LGNTK R+N ++L V
Sbjct: 332 QNFDKGGYLFLPSYVMRTHGVKQQREAVKKVPRKQLEPVFEALDTLGNTKWRVNNKVLSV 391
Query: 350 VESIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTEL 409
V+ IWAGGG +AGLVD +V +P++ ++D + ++WK++V+ KK N ER+S RCDTEL
Sbjct: 392 VDRIWAGGGRLAGLVDRNDVEIPEELESDDEAEKKKWKWKVKSVKKENRERYSLRCDTEL 451
Query: 410 KLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRW 469
KL+VARKMKDE+CFYYPHNLDFRGRAYPMHPHLNHLGSD+CRG+LEFA+GRPLGKSGL W
Sbjct: 452 KLAVARKMKDEECFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGLHW 511
Query: 470 LKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACI 529
LKIHLANLY GG++KLS +GR+ FVENH+ +IFDSA+ P+ G RWWL AEDPFQ LAAC+
Sbjct: 512 LKIHLANLYGGGVDKLSNEGRITFVENHLDEIFDSAEQPMEGRRWWLNAEDPFQFLAACM 571
Query: 530 NLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEI 589
L+EAL+ S+P S ISH+P+HQDGSCNGLQHYAALGRD+L AAAVNLVA EKPADVYS I
Sbjct: 572 TLTEALKISTPESFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGI 631
Query: 590 AVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKR 649
A RV IM+ D+ KDP TF A AK+L++Q+DRKLVKQTVMTSVYGVTYIGAR+QIK+R
Sbjct: 632 AARVLAIMKIDAQKDPETFSEARHAKILVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRR 691
Query: 650 LEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTT 709
L+E+ I DD LF AACYAAKVTL AL E+FE AR IM+WLGDCAKVIA EN+ V WTT
Sbjct: 692 LKERDAIADDSELFGAACYAAKVTLTALQEMFEGARSIMNWLGDCAKVIASENEPVCWTT 751
Query: 710 PLGLPVVQPYCKTERHLVSL 729
PLGLPVVQPY RH+VS+
Sbjct: 752 PLGLPVVQPYRYQGRHIVSV 771
>K7L900_SOYBN (tr|K7L900) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 671
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 320/565 (56%), Positives = 405/565 (71%), Gaps = 14/565 (2%)
Query: 18 RRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKAHQ 77
RRQI++ETEAW APNLP +KSL LGWFEPL+ A+ A+Q+
Sbjct: 108 RRQIKSETEAWAEAAREYEELLEDMREQKLAPNLPYMKSLFLGWFEPLRNAILADQEL-- 165
Query: 78 ARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEG--CVQLVQAAVQIGMALEQE 135
+ K + S AP + LPA +AV+ MHK+M+L+M N G +++QAA QIG A+E E
Sbjct: 166 CKDSKCRMSHAPYFNDLPADMMAVVTMHKLMALLMTNTNGVGTARVIQAACQIGEAVENE 225
Query: 136 VRIHKFLEGNKSLQS------KKTEADTEENLNNDKEKQR--KFVNGLIKR-KKLKEVHV 186
RI++F++ K +S ++ TEEN DK++ R K V L+K+ KKL+ + +
Sbjct: 226 ARIYQFMKREKENKSSHVVPVEQRGELTEENGEMDKKQSRLRKRVAALMKKQKKLQAMGI 285
Query: 187 VLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRS 246
V Q++ W + AQ K+GSRL++LLIETAY+ P N D PPDIRPAF+H K S S
Sbjct: 286 VRGQDDWKAWGQEAQVKVGSRLMQLLIETAYIQPPANLIGDGPPDIRPAFKHTLKTLS-S 344
Query: 247 PGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMR 306
QK + YGVI+CDPLV GLEK A+H W GYDKG +LFLPSY+MR
Sbjct: 345 ESQKETRRYGVIECDPLVQNGLEKSARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMR 404
Query: 307 THGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC 366
HG+++Q++ +K Q+ VFEAL+ LG+TK R+N R+L V++ IWA GG +A LVD
Sbjct: 405 VHGAKQQREAVKRAPKSQLDPVFEALNTLGSTKWRVNKRVLCVIDQIWANGGRLADLVDR 464
Query: 367 ENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYP 426
ENVP P +P T+D +I++WK++V+ KK N ERHSQRCD ELKL+VARKMKDE+ FYYP
Sbjct: 465 ENVPEPKEPDTKDEAEIRKWKWKVKAVKKENNERHSQRCDIELKLAVARKMKDEEGFYYP 524
Query: 427 HNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLS 486
HNLDFRGRAYPMHP+LNHLGSDLCRG+LEF+EGRPLGKSGL WLKIHLANLYAGG++KLS
Sbjct: 525 HNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLCWLKIHLANLYAGGVDKLS 584
Query: 487 YDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISH 546
YDGR+ F ENH+ DIFDSAD P+ G RWWL+AEDPFQCLAAC NLSEALRS +P + ISH
Sbjct: 585 YDGRIEFTENHLDDIFDSADRPLEGKRWWLQAEDPFQCLAACTNLSEALRSPTPETTISH 644
Query: 547 LPIHQDGSCNGLQHYAALGRDELEA 571
+P+HQDGSCNGLQHYAALGRD++ A
Sbjct: 645 MPVHQDGSCNGLQHYAALGRDKIHA 669
>K7L901_SOYBN (tr|K7L901) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 671
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 319/562 (56%), Positives = 403/562 (71%), Gaps = 14/562 (2%)
Query: 18 RRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKAHQ 77
RRQI++ETEAW APNLP +KSL LGWFEPL+ A+ A+Q+
Sbjct: 108 RRQIKSETEAWAEAAREYEELLEDMREQKLAPNLPYMKSLFLGWFEPLRNAILADQEL-- 165
Query: 78 ARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEG--CVQLVQAAVQIGMALEQE 135
+ K + S AP + LPA +AV+ MHK+M+L+M N G +++QAA QIG A+E E
Sbjct: 166 CKDSKCRMSHAPYFNDLPADMMAVVTMHKLMALLMTNTNGVGTARVIQAACQIGEAVENE 225
Query: 136 VRIHKFLEGNKSLQS------KKTEADTEENLNNDKEKQR--KFVNGLIKR-KKLKEVHV 186
RI++F++ K +S ++ TEEN DK++ R K V L+K+ KKL+ + +
Sbjct: 226 ARIYQFMKREKENKSSHVVPVEQRGELTEENGEMDKKQSRLRKRVAALMKKQKKLQAMGI 285
Query: 187 VLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRS 246
V Q++ W + AQ K+GSRL++LLIETAY+ P N D PPDIRPAF+H K S S
Sbjct: 286 VRGQDDWKAWGQEAQVKVGSRLMQLLIETAYIQPPANLIGDGPPDIRPAFKHTLKTLS-S 344
Query: 247 PGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMR 306
QK + YGVI+CDPLV GLEK A+H W GYDKG +LFLPSY+MR
Sbjct: 345 ESQKETRRYGVIECDPLVQNGLEKSARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMR 404
Query: 307 THGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC 366
HG+++Q++ +K Q+ VFEAL+ LG+TK R+N R+L V++ IWA GG +A LVD
Sbjct: 405 VHGAKQQREAVKRAPKSQLDPVFEALNTLGSTKWRVNKRVLCVIDQIWANGGRLADLVDR 464
Query: 367 ENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYP 426
ENVP P +P T+D +I++WK++V+ KK N ERHSQRCD ELKL+VARKMKDE+ FYYP
Sbjct: 465 ENVPEPKEPDTKDEAEIRKWKWKVKAVKKENNERHSQRCDIELKLAVARKMKDEEGFYYP 524
Query: 427 HNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLS 486
HNLDFRGRAYPMHP+LNHLGSDLCRG+LEF+EGRPLGKSGL WLKIHLANLYAGG++KLS
Sbjct: 525 HNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLCWLKIHLANLYAGGVDKLS 584
Query: 487 YDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISH 546
YDGR+ F ENH+ DIFDSAD P+ G RWWL+AEDPFQCLAAC NLSEALRS +P + ISH
Sbjct: 585 YDGRIEFTENHLDDIFDSADRPLEGKRWWLQAEDPFQCLAACTNLSEALRSPTPETTISH 644
Query: 547 LPIHQDGSCNGLQHYAALGRDE 568
+P+HQDGSCNGLQHYAALGRD+
Sbjct: 645 MPVHQDGSCNGLQHYAALGRDK 666
>B9N1V3_POPTR (tr|B9N1V3) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_580715 PE=3 SV=1
Length = 543
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 290/397 (73%), Positives = 342/397 (86%), Gaps = 1/397 (0%)
Query: 325 MQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQ 384
+ +F+ALD LGNT+ R+N R+L VV+ IW+ GG +A LVD +VPLP+KP TED ++
Sbjct: 18 FELIFQALDTLGNTRWRVNKRVLSVVDRIWSNGGCLADLVDHSDVPLPEKPETEDEALLK 77
Query: 385 EWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNH 444
+WK+++R KK N ERH+QRCD ELKL+VARKMKDE+ FYYPHN+DFRGRAYPMHP+LNH
Sbjct: 78 KWKWKLRGVKKENKERHAQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNH 137
Query: 445 LGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDS 504
LGSDLCRG+LEFAEGRPLGKSGLRWLKIH+ANL+AGG++KLSY+GR+ F ENH+ DIFD
Sbjct: 138 LGSDLCRGILEFAEGRPLGKSGLRWLKIHIANLFAGGVDKLSYEGRIAFTENHLDDIFDC 197
Query: 505 ADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAAL 564
D P++G RWWL AEDPFQ LA CINL+EALRSSSP + ISH+P+HQDGSCNGLQHYAAL
Sbjct: 198 TDKPLDGKRWWLHAEDPFQFLAVCINLTEALRSSSPETYISHIPVHQDGSCNGLQHYAAL 257
Query: 565 GRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRK 624
GRD+L AAAVNLVA EKPADVYS IA RV DIMRRD+ KDP FP+AL AK LI+Q+DRK
Sbjct: 258 GRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPDVFPDALRAKELINQVDRK 317
Query: 625 LVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAA 684
LVKQTVMTSVYGVTYIGARDQIK+RL+E+G IT++ +F +CYAAKVTL ALGE+FEAA
Sbjct: 318 LVKQTVMTSVYGVTYIGARDQIKRRLKERG-ITEESDIFGCSCYAAKVTLTALGEMFEAA 376
Query: 685 RGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCK 721
R IM+WLGDCAK+IA EN+ V WTTPLGLPVVQPY K
Sbjct: 377 RSIMNWLGDCAKIIASENEPVRWTTPLGLPVVQPYRK 413
>A6GV61_CHRMO (tr|A6GV61) DNA-directed RNA polymerase (Fragment) OS=Chrysanthemum
morifolium GN=NEP PE=3 SV=1
Length = 383
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 293/406 (72%), Positives = 342/406 (84%), Gaps = 24/406 (5%)
Query: 292 YDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVE 351
YD GGH FLPSY+MRTHGSR+QQD +++ QMQK++EALD LG+TK R+N RLL+VVE
Sbjct: 1 YDCGGHFFLPSYLMRTHGSRQQQDAVEDAPPSQMQKIYEALDTLGSTKWRVNKRLLNVVE 60
Query: 352 SIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKL 411
SIWA GG++AGLV+ ++V +PD +ED +I+EW++ VRKAKKMN E HSQRCD ELKL
Sbjct: 61 SIWAAGGDIAGLVNRQDVSIPDLN-SEDSSEIKEWRWSVRKAKKMNQELHSQRCDIELKL 119
Query: 412 SV-ARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWL 470
SV AR+MKDE+ FYYPHNLDFRGRAYPMHPHLNHL SDLCRG+LEFAEGRPLGKSGLRWL
Sbjct: 120 SVVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWL 179
Query: 471 KIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACIN 530
+IHLANLY G+EKLSYDGRL FVE+HI +I DSADNP+ GNRWWL AEDPFQCLAACIN
Sbjct: 180 RIHLANLYGSGVEKLSYDGRLAFVESHISEIIDSADNPLGGNRWWLTAEDPFQCLAACIN 239
Query: 531 LSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIA 590
L+E L+SSSP++VISHLP+HQDGSCNGLQHYAALGRD +EAAAVNLVA EKPADVYSEIA
Sbjct: 240 LAETLKSSSPHTVISHLPVHQDGSCNGLQHYAALGRDTVEAAAVNLVAGEKPADVYSEIA 299
Query: 591 VRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRL 650
R DI+ Q++RKLVKQTVMTSVYGVT++GAR+QIK+RL
Sbjct: 300 TRYADII----------------------QVNRKLVKQTVMTSVYGVTFVGAREQIKRRL 337
Query: 651 EEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAK 696
+EKG I+DD+LLF+A+CYAA+VTL ALGE+FEAARG M WLGDCAK
Sbjct: 338 QEKGHISDDQLLFSASCYAARVTLEALGEIFEAARGTMCWLGDCAK 383
>M1AS01_SOLTU (tr|M1AS01) DNA-directed RNA polymerase OS=Solanum tuberosum
GN=PGSC0003DMG400011152 PE=3 SV=1
Length = 471
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 287/346 (82%), Positives = 319/346 (92%)
Query: 382 QIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPH 441
+++ WK+RVRKAKK+N E HSQRCDTELKLSVARK+KDE+ FYYPHNLDFRGRAYPMHPH
Sbjct: 2 ELKRWKWRVRKAKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPH 61
Query: 442 LNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDI 501
LNHL SDLCRG+LEFAEGRPLGKSGLRWLK+HLA+LYAGGIEKL YD R+ FVENHI DI
Sbjct: 62 LNHLSSDLCRGILEFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVENHIDDI 121
Query: 502 FDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHY 561
DSA NP+NGNRWWL AEDP QCLAACINLSEAL+S SP++VISHLPIHQDGSCNGLQHY
Sbjct: 122 LDSAHNPLNGNRWWLNAEDPLQCLAACINLSEALKSPSPHTVISHLPIHQDGSCNGLQHY 181
Query: 562 AALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQI 621
AALGRD +EAAAVNLVA EKPADVY+EIA+RV I+R DS KDP+T PNALLAK+LIDQ+
Sbjct: 182 AALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQV 241
Query: 622 DRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVF 681
DRKLVKQTVMTSVYGVTY+GAR+QIK+RLEEKGLI DDRLLFTA+CYAAKVTLAALGE+F
Sbjct: 242 DRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELF 301
Query: 682 EAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
+AARG M+WLGDCAKVIA ENQ V WTTPLGLPVVQPY KT+RH++
Sbjct: 302 QAARGTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVI 347
>B9N1V2_POPTR (tr|B9N1V2) Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_925854 PE=4 SV=1
Length = 528
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/430 (61%), Positives = 325/430 (75%), Gaps = 32/430 (7%)
Query: 292 YDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVE 351
YDKG HLFLPSY+MR HG+++Q++ +K +Q+Q VFEALD LGNT+ R+N R+L VV+
Sbjct: 1 YDKGAHLFLPSYVMRIHGAKQQREAVKRAPRKQLQAVFEALDTLGNTRWRVNKRVLSVVD 60
Query: 352 SIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKL 411
IW+ GG +A LVD +VPLP+KP TED +++WK+++R KK N ERH+QRCD ELKL
Sbjct: 61 RIWSNGGCLADLVDHSDVPLPEKPETEDEALLKKWKWKLRGVKKENKERHAQRCDIELKL 120
Query: 412 SVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLK 471
+VARKMKDE+ FYYPHN+DFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLK
Sbjct: 121 AVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLK 180
Query: 472 IHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINL 531
IH+ANL+AGG++KLSY+GR+ F ENH+ DIFDSAD P++G RWWL AEDPFQ LA CINL
Sbjct: 181 IHIANLFAGGVDKLSYEGRIAFTENHLDDIFDSADKPLDGKRWWLHAEDPFQFLAVCINL 240
Query: 532 SEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAV 591
+EALRSSSP + ISH+P+HQDGSCNGLQHYAALGRD+L AAAVNLVA EKPADVYS IA
Sbjct: 241 TEALRSSSPETYISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAA 300
Query: 592 RVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLE 651
R+ + M + A+++I + +K + +
Sbjct: 301 RLFNYM--------CVCVEWVRAQIIISYKNFFHMKNVISQA------------------ 334
Query: 652 EKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPL 711
KG I LF A + +VTL ALGE+FEAAR IM+WLGDCAK+IA EN+ V WTTPL
Sbjct: 335 SKGGIK----LFELAWF--QVTLTALGEMFEAARSIMNWLGDCAKIIASENEPVRWTTPL 388
Query: 712 GLPVVQPYCK 721
GLPVVQPY K
Sbjct: 389 GLPVVQPYRK 398
>D2VYC1_NAEGR (tr|D2VYC1) DNA-directed RNA polymerase OS=Naegleria gruberi
GN=NAEGRDRAFT_81702 PE=3 SV=1
Length = 933
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 276/689 (40%), Positives = 387/689 (56%), Gaps = 71/689 (10%)
Query: 51 LPRVKSLLLGWFEPLKEAVEAEQ--------------KAHQARSKKQQASIAPNVDSLPA 96
LP K ++L W+EPL + + +Q + + +I + S+ A
Sbjct: 162 LPPAKKIMLEWYEPLTKIIREKQDEVNFSCSKKKSSSTNTTTTTSQDNFAIPLYLTSISA 221
Query: 97 AKVAVIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEAD 156
K+A+I +H++++ ++ E G + + QIG A++ E+ + K N K +
Sbjct: 222 EKLAIITLHELLASCLK-ERGGSPVSSISYQIGDAIQAEINVEKLKRTNYFKLIIKNQM- 279
Query: 157 TEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETA 216
N+N I + KL E +V +EE+ +LGS LI+L + TA
Sbjct: 280 IYHNINK------------ISKLKLNE-YVTFTKEEL--------VQLGSYLIQLALSTA 318
Query: 217 YVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDP--LVLAGLEKCAKH 274
H P+ P + PAF H ++ + KI+ GV++ D L L G E A+
Sbjct: 319 --HVPL---ISNPKETVPAFIH----RNITRNSKII---GVVEPDDNLLHLIGREHVAQE 366
Query: 275 XXXXXXXXXXXXKK-WKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALD 333
W GG++ L IMRT GS Q +K+ ++ + L+
Sbjct: 367 ILYPNHLPMLVPPNPWTSSTAGGYIALKVLIMRTRGSHLQAYTLKSA---ELNDLLSGLN 423
Query: 334 ILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKA 393
L T+ RIN + + V +W GG + L + LP++P T+D + ++WK V K
Sbjct: 424 TLNETRWRINPTVYETVLKVWNSGGGLGELPSRFDDTLPEEPETDDPEIKKKWKRTVEKI 483
Query: 394 KKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGL 453
K N HS RCD LKL VA KD + FY+PHN+DFRGRAYP+ PHLNHLG+D+ RGL
Sbjct: 484 KTHNRNLHSLRCDMLLKLKVAEDFKD-NTFYFPHNIDFRGRAYPIPPHLNHLGADINRGL 542
Query: 454 LEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNR 513
L F +G P+GK G+ WLKIHLANLY G +KL +D R+ FV+ +I++I DSAD P+ GNR
Sbjct: 543 LTFEKGMPIGKRGIFWLKIHLANLY--GKDKLPFDERVQFVDEYINEIIDSADQPLEGNR 600
Query: 514 WWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAA 573
WWL++E+P+Q LAAC+ L+E LRS +P +SHLPI DGSCNGLQHYAALGRD L A
Sbjct: 601 WWLKSENPWQTLAACVELAECLRSPNPEEFLSHLPIQMDGSCNGLQHYAALGRDNLGALH 660
Query: 574 VNLVAKEKPADVYSEIAVRVHDIMRRD---SNKDPSTFPNALLAKVLIDQIDRKLVKQTV 630
VNL+ KP DVY + V + RD NK LAK+L + R +KQTV
Sbjct: 661 VNLLPTSKPMDVYVGVLEVVKKHIERDMKAGNK---------LAKLLHGNVYRSTIKQTV 711
Query: 631 MTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSW 690
MTSVYGVT++GAR+QI+KRL+EK + +D +F A Y A +TL +LGEVF +A+ IM W
Sbjct: 712 MTSVYGVTFVGAREQIQKRLKEKKEVPEDD-VFACASYLASITLKSLGEVFSSAQNIMEW 770
Query: 691 LGDCAKVIAYENQAVHWTTPLGLPVVQPY 719
L DCA +I+ + V W TPLGLPV+QPY
Sbjct: 771 LNDCALLISSSDTPVSWITPLGLPVIQPY 799
>C1EB37_MICSR (tr|C1EB37) DNA-directed RNA polymerase OS=Micromonas sp. (strain
RCC299 / NOUM17) GN=MICPUN_83775 PE=3 SV=1
Length = 899
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 279/732 (38%), Positives = 400/732 (54%), Gaps = 70/732 (9%)
Query: 51 LPRVKSLLLGWFEPLKEAVEAEQKAHQARSKK-QQASIAPNVDSLPAAKVAVIVMHKMMS 109
LP + LL G+F PL A+ EQ+ + + + +++ P + L K+AVI +H ++S
Sbjct: 62 LPLGRRLLQGFFAPLTSAIRLEQEHVRLKVRGVDRSNYGPFLLMLNPDKLAVITLHTVIS 121
Query: 110 LVMENEE----------GCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEE 159
+M+ E+ G + V+A +G +++ EV + + + +++ T+ E
Sbjct: 122 QLMKGEQMFGEPNEAQAGMCKFVRAVEMLGQSVQAEVNLARLRQ-----RARLTKKRYLE 176
Query: 160 NLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEV----SPWSRAAQAKLGSRLIELLIET 215
+ N R + K L V V + S W ++K+G+ L++LL+ T
Sbjct: 177 SKNGPHVHDRFMKVNMESLKTLTTVRGVARLARTALNDSDWGGVTRSKVGAALVKLLLTT 236
Query: 216 AYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK----C 271
A + P D PAF H + YGVI ++
Sbjct: 237 ARIRVP---GPDGELIEVPAFYHDYVKHK-------AHRYGVISWHDAFFTFMDDEAMIR 286
Query: 272 AKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMR----THGSRKQQDVMKNVKGEQ--- 324
A + W ++ GG+L S +MR THG K+Q M + GEQ
Sbjct: 287 ATLSPVRYMPMVTPPRPWTRFNAGGYLRTESIVMRGHYTTHGPSKRQ--MLALHGEQSGA 344
Query: 325 --------MQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPP 376
Q V +AL++LG T RIN +L V+E +WA GG A + ENVP P P
Sbjct: 345 ELDGRAAKFQPVLDALNVLGRTAWRINEDVLRVMEEVWATGGGRADVPPRENVPDPTWPA 404
Query: 377 TE----------------DLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDE 420
+ + + + + + K+ N E HSQRCD +KL VA++M+DE
Sbjct: 405 NPYGLRRSRGQLAATALPSRQDVAGFIHSLNRTKQRNRELHSQRCDFLIKLQVAKEMRDE 464
Query: 421 DCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAG 480
D Y+PHN+DFRGRAY MH HLNHLGSD+CRG L FA+ RPLG GL WL I ANLYAG
Sbjct: 465 DRIYFPHNIDFRGRAYTMHVHLNHLGSDICRGALVFADARPLGNDGLDWLYIQAANLYAG 524
Query: 481 GIEKLSYDGRLGFVENHIHDIFDSADNPVNGN-RWWLRAEDPFQCLAACINLSEALRSSS 539
G++KL D R ++E+ +H + SA +P+ + +WL AEDP+QCLA C + A S
Sbjct: 525 GVDKLPMDERRQWIEDRVHLLEQSARDPLGPDGGFWLDAEDPWQCLACCFEIERARASGD 584
Query: 540 PNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRR 599
P + + LP+HQDGSCNGLQHYAALGRDE VNL+ +++P DVY+ IA + I+
Sbjct: 585 PPAYMCRLPVHQDGSCNGLQHYAALGRDEAGGEQVNLMPRDRPGDVYTGIANVLKRIVAE 644
Query: 600 DSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDD 659
D+ K+P LA L +DRKLVKQTVMTSVYGVT+IGAR QI+ RL+E+G + D+
Sbjct: 645 DA-KNPEDPETQALAIALAPHVDRKLVKQTVMTSVYGVTHIGARQQIQNRLKERGAVEDE 703
Query: 660 RLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPY 719
L + A YAA+ TL AL +F AR +M+WL +CA+V+ + +AV WTTPLGLPVVQPY
Sbjct: 704 NLRYKMANYAARRTLDALANLFVNARDVMAWLAECARVVCSQGRAVEWTTPLGLPVVQPY 763
Query: 720 -CKTERHLVSLL 730
K++R + +L+
Sbjct: 764 RVKSQRMIRTLV 775
>K8F9T9_9CHLO (tr|K8F9T9) DNA-directed RNA polymerase OS=Bathycoccus prasinos
GN=Bathy10g00540 PE=3 SV=1
Length = 1109
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 298/835 (35%), Positives = 429/835 (51%), Gaps = 107/835 (12%)
Query: 1 MRAEQEVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLG 60
+R ++E E F A R RQ E E+ NLP V+ LL
Sbjct: 153 LRIKEESPENLEFVARRERQRRVENESVNDEIKRYREMSEQMAQVGAGANLPAVRQLLTS 212
Query: 61 WFEPLKEAVEAEQKA-HQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMEN----- 114
++EPL VE EQ + + P + L A K+AVI +H ++S++M
Sbjct: 213 FYEPLMVGVEREQNMISEGVPGFDRRVYGPYLQLLGADKIAVISLHTIISMLMRGVEKTR 272
Query: 115 ------------EEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEA------D 156
E G V+ V+ A +G +E EV + + L+ + L S + A D
Sbjct: 273 GDVFRDHSREHGEAGSVKFVRLASSLGRVIEAEVNLSR-LQTREKLLSARYRAGLINMED 331
Query: 157 TEENLNNDK-----------EKQRKFVN--------GLIKR-------------KKLKEV 184
E N ++ E++ K N LIK KKLK V
Sbjct: 332 IVETFNQERHAGENEMIAEREREEKIANIDREIREKNLIKESDIRSTMLQRDSTKKLKSV 391
Query: 185 HVVLKQE----EVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIR-PAFRHG 239
V +Q + + W K+G+ +I ++++ + P ++A+T I PAF H
Sbjct: 392 RAVSEQAKKALDNADWGSVLHLKVGAAIIAIVLDVCKIKVPGPETAETGEKIEVPAFYHD 451
Query: 240 FK---------PQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKKWK 290
+ Q SP + + V + A+ + W+
Sbjct: 452 YSLEPNAYQGWKQKASPNNRSGTVHWHDSFFRFVHSATLARARSAITRHKPMIVPPRPWE 511
Query: 291 GYDKGGHLFLPSYIMRTHGSRK-----QQDVMKNVKGEQMQKVFEALDILGNTKRRINGR 345
Y+KGG+L S +MR + SR Q ++ GE VF AL++LG+T IN
Sbjct: 512 SYNKGGYLNSNSVVMRGNYSRDGPSDGQMKLLAERVGE-YDNVFGALNVLGSTAWVINTD 570
Query: 346 LLDVVESIW-----AGG--GNVAGLVDCENVPLPDKPPTE-----------------DLK 381
+L+V+E +W AGG G +A + + LP+ P +E +
Sbjct: 571 ILEVIEQVWREKKYAGGFGGGIANIPPRAELNLPNWPSSEFRLRRERNGPLYATALPSSR 630
Query: 382 QIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPH 441
++ E+ +AK+ N E HSQRCD +KL VAR+MK+E+ Y+PHN+DFRGRAY MH H
Sbjct: 631 EVGEFMRAFNRAKQTNRELHSQRCDFAIKLQVAREMKNEERIYFPHNVDFRGRAYTMHAH 690
Query: 442 LNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDI 501
LNH+GSD CRG L+FA+ +PLG++GL WL I ANLY GG +KL R+ F + ++ I
Sbjct: 691 LNHIGSDFCRGTLKFADAKPLGENGLDWLFIQCANLYGGGADKLPLHQRVEFSKLNLEKI 750
Query: 502 FDSADNPVNG-NRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQH 560
SA++P+ WW A+DP+QCLA C+ + +A+ S P + +LP+HQDGSCNGLQH
Sbjct: 751 KKSAEDPLGPEGSWWQDADDPWQCLATCMEIIKAINSKDPAKYMCNLPVHQDGSCNGLQH 810
Query: 561 YAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRD----SNKDPSTFPNALLAKV 616
YAALGRD AVNLV ++ ADVY+ IA + DI+++D KD + LAK+
Sbjct: 811 YAALGRDFAGGRAVNLVPADRGADVYTGIANVLRDIVQKDIENCDYKDEESVERMKLAKL 870
Query: 617 LIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAA 676
LIDQ+DRKLVKQTVMTSVYGVT++GAR QI RL+E+ + + + A YAAK TL A
Sbjct: 871 LIDQVDRKLVKQTVMTSVYGVTFVGARMQISARLKERVGFESESVRYRVAAYAAKRTLDA 930
Query: 677 LGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPY-CKTERHLVSLL 730
L ++F+ AR +M WL CA V+ N V WTTPLGLPV+QPY +T++ + +LL
Sbjct: 931 LNDMFQNAREVMGWLTHCASVVTKVNAPVQWTTPLGLPVLQPYRNQTQKSVRTLL 985
>A4S334_OSTLU (tr|A4S334) DNA-directed RNA polymerase OS=Ostreococcus lucimarinus
(strain CCE9901) GN=OSTLU_34669 PE=3 SV=1
Length = 922
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 290/758 (38%), Positives = 401/758 (52%), Gaps = 65/758 (8%)
Query: 3 AEQEVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWF 62
A++ R A+T R+Q EAE A LP V+ LL ++
Sbjct: 53 ADEGERRAQT-----RKQREAENLAVEREVMRYKELARKTFAAGIGAQLPVVQKLLASFY 107
Query: 63 EPLKEAVEAEQKAHQARSKKQQASIAPNVDS---------LPAAKVAVIVMHKMMSLVME 113
PL EA+ EQ+ K + ++ P VD L K+AV+ +H +S +M+
Sbjct: 108 VPLVEALTEEQE-------KIRGNV-PGVDRRVYGHYLGLLEPDKLAVLTLHATLSTLMK 159
Query: 114 NE---EGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQS---KKTEADTEENLNNDKEK 167
+ G + + A Q+G A++ EV + + K+ + + +TE N+ +
Sbjct: 160 GDGRNNGAAKFISVADQVGSAVQAEVNLERMRSAEKAAKEAFRRSRLVNTEGNVKEIDDA 219
Query: 168 QRKFVNGLIKRKKLKEVHVVLKQE----EVSPWSRAAQAKLGSRLIELLIETAYVHSPVN 223
+N + K+ + V K E + W R + K+G+ L+ L+ TA + P
Sbjct: 220 AEHRINLALDTSKMNTIKSVSKHARQALENAEWGREIRLKIGTVLLTALMNTAKIGVPDE 279
Query: 224 QSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXX 283
+ PAF H +K Y I + + A L +H
Sbjct: 280 KGELL---TLPAFYHDYKEAGYGMLHWHDSIYRFINTETMTRAALVPV-RHFPMVIPP-- 333
Query: 284 XXXKKWKGYDKGGHLFLPSYIMRTH-----GSRKQQDVMK------NVKGE--QMQKVFE 330
+ W+ Y+KGG+L + MR SR Q ++ + GE Q Q V +
Sbjct: 334 ---RYWERYNKGGYLRADNLCMRGKYSNEGPSRAQIAALEEKAREADASGEPVQYQPVLD 390
Query: 331 ALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKP----PTEDLKQIQEW 386
AL+ LG T +IN +L +VE +WA GG VA + + LP P P + ++ ++
Sbjct: 391 ALNALGQTAWQINTDVLPIVEEVWARGGGVAEVPLRAELQLPRWPGGGLPGKG--EVIDF 448
Query: 387 KYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLG 446
VRK KK N+E HSQRCD +KL VAR+MK+E Y+PHNLDFRGRAY MH HLNH+G
Sbjct: 449 LQSVRKTKKSNMELHSQRCDFLIKLQVAREMKNEPNIYFPHNLDFRGRAYTMHVHLNHIG 508
Query: 447 SDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSAD 506
SDLCRGLL F E +PLG+ GLRW+ I A L+ G +KL D R+ F+++ I D+ SA
Sbjct: 509 SDLCRGLLRFNEKKPLGERGLRWMHIQCATLFGNGADKLPMDERVQFIKDRIEDVRASAQ 568
Query: 507 NPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGR 566
+P+ + WW AE+P+QCLA CI L +AL S P +S+LP+HQDGSCNGLQHYAALGR
Sbjct: 569 DPLAKDAWWQEAEEPWQCLATCIELDKALELSDPTQFMSNLPVHQDGSCNGLQHYAALGR 628
Query: 567 DELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRD----SNKDPSTFPNALLAKVLIDQID 622
D AVNLV ++ ADVY+ IA + I+ D ++D NA LA L ID
Sbjct: 629 DLHGGEAVNLVPADRGADVYTGIANVLKRIVAEDIKLIDSEDEEDVNNAKLAMSLAQHID 688
Query: 623 RKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLL-FTAACYAAKVTLAALGEVF 681
RKLVKQTVMTSVYGVT+IGAR QI RL E+ + D+ LL + + YAAK TL AL +F
Sbjct: 689 RKLVKQTVMTSVYGVTFIGARAQIYSRLREREAMEDNELLRYRVSNYAAKRTLDALNNMF 748
Query: 682 EAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPY 719
AR +M WL CA + + V WTTPLGLPVVQPY
Sbjct: 749 SNARDVMGWLTTCATIATSAGEPVRWTTPLGLPVVQPY 786
>Q0R0H7_9EUKA (tr|Q0R0H7) DNA-directed RNA polymerase OS=Naegleria sp. TES-2005
PE=3 SV=1
Length = 968
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 272/695 (39%), Positives = 389/695 (55%), Gaps = 77/695 (11%)
Query: 51 LPRVKSLLLGWFEPLKEAVEAEQKAHQARSKKQQA--------------------SIAPN 90
LP K +LL W+EPL + + +Q +KK+ SI +
Sbjct: 191 LPPAKKILLEWYEPLTKLIREKQDEVNFSAKKKSTISAADSASAANTTSGAVDHFSIPLH 250
Query: 91 VDSLPAAKVAVIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQS 150
+ S+ A K+A+I +H++++ + G + + +G A++ E+ + K N
Sbjct: 251 LTSISAEKLAIITLHELLASCLRERAGSA-VSSLSYVVGDAIQAEINMEKLKRTNHFKLI 309
Query: 151 KKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIE 210
K + N+N + + KL E +V +EE+ +LGS LI+
Sbjct: 310 LKNQM-VYHNINK------------LSKLKLNE-YVSFSKEEL--------IRLGSYLIQ 347
Query: 211 LLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDP--LVLAGL 268
L ++TA V P+ D P + PAF H K SR+ G+ I G+I+ D + L G
Sbjct: 348 LTLDTAKV--PL---VDNPKESVPAFIH--KNVSRA-GKVI----GMIEPDENLIQLVGR 395
Query: 269 EKCAKHXXXXXXXXXXXXKK-WKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQK 327
E + W GG++ L IMRT GS Q ++K+ ++
Sbjct: 396 EHLTQEILFPNHLPMLVPPNPWTSSVSGGYIALKVMIMRTRGSHLQSYILKSA---ELTD 452
Query: 328 VFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWK 387
+ L+ L +K +N ++ + V +W GG + L + LP++P T+D + ++WK
Sbjct: 453 LLSGLNTLNESKWIVNPKVYETVLRVWNEGGGLGELPSRFDDALPEEPETDDPEVKKKWK 512
Query: 388 YRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGS 447
K K+ N HS RCD LKL VA KD + FY+PHN+DFRGRAYP+ PHLNHLG+
Sbjct: 513 RTCEKIKQHNRNLHSLRCDMLLKLKVAEDFKD-NAFYFPHNIDFRGRAYPIPPHLNHLGA 571
Query: 448 DLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADN 507
D+ RGLL F +G P+GK G+ WLKIHLANLY G +KL +D R+ F++ ++ ++FDSAD
Sbjct: 572 DINRGLLTFEKGMPIGKRGIFWLKIHLANLY--GKDKLPFDERVQFIDQNMAEVFDSADV 629
Query: 508 PVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRD 567
P++GNRWWL++E+P+Q LAAC+ L+ LRS P IS+LPI DGSCNGLQHYAALGRD
Sbjct: 630 PLDGNRWWLQSENPWQTLAACVELTNCLRSEKPEEYISNLPIQMDGSCNGLQHYAALGRD 689
Query: 568 ELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRD---SNKDPSTFPNALLAKVLIDQIDRK 624
L A VNL+ KP DVY + V + RD NK LAK+L + R
Sbjct: 690 NLGALHVNLLPTSKPMDVYVGVLEVVKKHIERDMKAGNK---------LAKLLHGNVYRS 740
Query: 625 LVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAA 684
+KQTVMTSVYGVT++GAR+QI+KRL+EK + +D +F A Y A +TL +LGEVF +A
Sbjct: 741 TIKQTVMTSVYGVTFVGAREQIQKRLKEKKEVPEDD-VFACASYLASITLKSLGEVFSSA 799
Query: 685 RGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPY 719
+ IM WL DCA +I+ + V W TPLGLPV+QPY
Sbjct: 800 QNIMEWLNDCALLISSSDTPVSWITPLGLPVIQPY 834
>Q2XSM7_PHYPO (tr|Q2XSM7) DNA-directed RNA polymerase OS=Physarum polycephalum
GN=rpoM PE=2 SV=1
Length = 997
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 264/704 (37%), Positives = 385/704 (54%), Gaps = 69/704 (9%)
Query: 50 NLPRVKSLLLGWFEPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMS 109
+L + ++ W+ P ++++ A + AR+ S+ N+ L + K+ VI +H+ +
Sbjct: 208 SLGPTRRIIDSWYGPFRDSINAAVRKMSARASSH--SLVANLKLLSSDKLPVITLHQTLG 265
Query: 110 LVMENEEGCVQLVQAAVQIGMALEQEVRIHKF-LEGNKSLQSK-KTEADTEENLNNDKEK 167
+++ N EG V +Q A +G A++ EV + E ++ +S K+++ L N K K
Sbjct: 266 MLLANTEG-VPFMQVAFAVGRAVQAEVNFERMKAEDKQAFRSLLKSKSGITVTLVNIKAK 324
Query: 168 QRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN---- 223
LK+ + W +LG+ L++ L+ +A + V+
Sbjct: 325 ------------------YTLKKHD---WDSKTIVQLGAFLLKHLMLSAKIEKNVDKVLS 363
Query: 224 ------------QSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKC 271
Q AD + AF H +K + + G+++C + ++
Sbjct: 364 KANNLAVSSSERQLADD--EYVSAFVHYYKFYRQG---STTRRQGLLKCHENIFKYVDDG 418
Query: 272 AKHXXXXXXXXXXXXKK---WKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKV 328
K W GG+L++PS +MR + Q + N + V
Sbjct: 419 HVIKEVLDARLLPMVVKPVPWVSPTVGGYLYVPSVLMRAQEHQAQYASLWNA---DLTTV 475
Query: 329 FEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQE--- 385
F AL+ LG T R+N + +V+ +W GG +A L ++ PD P +DL E
Sbjct: 476 FAALNALGETGWRVNEEVYHIVKKVWDDGGGLAALPTRTDITFPD--PPDDLDTNDESKR 533
Query: 386 -WKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNH 444
WK RK +++N + +S RCDT KLSVA + D FY PHN+DFRGRAYP+ PHLN
Sbjct: 534 TWKKTERKIRQLNNDLNSLRCDTTYKLSVAETLLHMD-FYLPHNVDFRGRAYPIPPHLNQ 592
Query: 445 LGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDS 504
LGSD+CRGLL F E +PLG +GLRWLKIHLANLY G++K+ +D R+ FV+ +I +FDS
Sbjct: 593 LGSDMCRGLLVFKEKKPLGPTGLRWLKIHLANLY--GVDKVPFDARVNFVDKNIDKVFDS 650
Query: 505 ADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAAL 564
AD+P++G +WW+ A+DP+QCL C L++ALRS +P +S +P+HQDGSCNGLQHYAAL
Sbjct: 651 ADHPLDGEQWWVGADDPWQCLGTCFELAKALRSPNPEEFLSCMPVHQDGSCNGLQHYAAL 710
Query: 565 GRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRK 624
G DE+ VNLV + P DVYS +A V + D+ L K+L ++DRK
Sbjct: 711 GGDEIGGRKVNLVPSDAPQDVYSGVATVVAKRVHEDA------IAGHELGKLLDGKLDRK 764
Query: 625 LVKQTVMTSVYGVTYIGARDQIKKRLEEKGL-ITDDRLLFTAACYAAKVTLAALGEVFEA 683
+VKQTVMTSVYGVTYIGAR QI L +K + DD L+ A+ Y T AL ++F
Sbjct: 765 VVKQTVMTSVYGVTYIGARLQIHNALSDKDIEWRDDDQLYHASAYITNHTFEALNQMFLG 824
Query: 684 ARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
AR IM WL DCA++IA V W TPLGLP+VQPY K ++ LV
Sbjct: 825 ARNIMKWLADCARIIAKNKDPVAWVTPLGLPIVQPYVKNQQFLV 868
>L8GGB1_ACACA (tr|L8GGB1) DNA-directed RNA polymerase OS=Acanthamoeba castellanii
str. Neff GN=ACA1_101460 PE=3 SV=1
Length = 965
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 268/705 (38%), Positives = 390/705 (55%), Gaps = 86/705 (12%)
Query: 58 LLG-WFEPLKEAVEAEQKAHQARSKKQQASIAPN-----------------VDSLPAAKV 99
+LG WFEPL A+ AEQ A ++ A+ +P + ++P K+
Sbjct: 167 ILGHWFEPLCAAIRAEQNAALLKTSAADAAASPTKGKKKTQKAEDRELSAYLVTIPPEKL 226
Query: 100 AVIVMHKMMSLVMENE--EGCVQLVQAAVQIGMALEQEVRIHKFL-EGNKSLQSKKTEAD 156
AVI +H+ M ++++ EG V +G A+E E + EG K ++
Sbjct: 227 AVITIHETMCEILKSHHPEGA-PFAALVVAVGRAVEYEYNCERLAKEGWKPQLRNRSATP 285
Query: 157 TEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETA 216
T++ + + Q + Q E + W A AK+GS L++ L+ TA
Sbjct: 286 TKQQICSLIRTQSR------------------AQFEDASWGAALHAKIGSLLVQQLLGTA 327
Query: 217 YV-----HSPVNQSADTP-------PDIRPAF---RHGFKPQSRSPGQKILKN--YGVIQ 259
+ + V + +P P RPAF + + Q +L+ G +
Sbjct: 328 TIARKAEEADVAAAQSSPARLLSGAPRKRPAFVTKEEALLEPAFNHHQAMLRGKLTGFLG 387
Query: 260 CDPLVLAGLEKCAKH---XXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDV 316
C VLA +E + W ++GG+L + ++R GSR Q +V
Sbjct: 388 CHEQVLALMEHEEVQRGVMQARYMPMLVEPQPWVAPNQGGYLVARTQVLRAKGSRMQTEV 447
Query: 317 MKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPP 376
+++ M KV+E L++L +T RIN R+ +V+ W GG +A L N+P + P
Sbjct: 448 LRSAS---MDKVYECLNLLSSTPWRINNRMHEVICEAWDNGGGIADLPSRTNLPELEPPA 504
Query: 377 T--EDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGR 434
DL+ Q++ +KAK N HS RCD VA++ +D FYYPHN+DFRGR
Sbjct: 505 DYYSDLEVKQKFDRERKKAKIANYNLHSLRCD------VAKECQDR-TFYYPHNMDFRGR 557
Query: 435 AYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFV 494
YP+ PHLNHLG DLCRGLL FAEG+PLG+ LK+HLAN++ G +K++++ R+ FV
Sbjct: 558 TYPIPPHLNHLGQDLCRGLLTFAEGKPLGE-----LKVHLANVF--GNDKITFEDRVRFV 610
Query: 495 ENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGS 554
EN++ I DSA NP+ G RWWL+A+ P+QCLAA I L A S P + +S LPIHQDGS
Sbjct: 611 ENNMEHIMDSASNPLGGQRWWLKADKPWQCLAASIELINAYNSGQPETYVSTLPIHQDGS 670
Query: 555 CNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLA 614
CNGLQHYAALG DE+ A VNL+ E+P DVYS + V ++RR + + +A
Sbjct: 671 CNGLQHYAALGGDEMGARQVNLLPSERPQDVYSGV---VELVVRRLEDDAAN---GVEIA 724
Query: 615 KVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTL 674
+ L+ ++DRK++KQTVMTSVYGVT+IGAR QI+ L++KG ++DD +F A+ Y A T
Sbjct: 725 QRLLGKVDRKVIKQTVMTSVYGVTFIGARQQIENALKDKGKVSDDD-MFLASRYLATSTF 783
Query: 675 AALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPY 719
+++ E+F AR IM+WL DCA +IA + + V W TP+GLPVVQPY
Sbjct: 784 SSIKEMFSGAREIMTWLSDCATLIAKQGKPVTWVTPMGLPVVQPY 828
>F4Q691_DICFS (tr|F4Q691) DNA-directed RNA polymerase OS=Dictyostelium
fasciculatum (strain SH3) GN=rpmA PE=3 SV=1
Length = 1078
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/434 (48%), Positives = 286/434 (65%), Gaps = 14/434 (3%)
Query: 289 WKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLD 348
W + G +L P++IMRT+GS+ Q ++ + K++E L+ILG IN +LD
Sbjct: 526 WDSPNNGCYLHYPTFIMRTNGSKLQ---TSSIISADLSKIYEGLNILGEVPWNINRPVLD 582
Query: 349 VVESIWAGGGNVAGLVDCENVPLP-DKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDT 407
++ + W GG + L + LP +E +Q ++ V+K K++N + HS RCD
Sbjct: 583 IILAAWESGGGIGDLPSRFDYELPLAAEYSESAEQRKKHAKLVKKVKQLNHDLHSLRCDL 642
Query: 408 ELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGL 467
KL V +++++ D FY+PHN+DFRGR+YP+ PHLNHLGSD CR +L FAE +PLG GL
Sbjct: 643 SYKLDVGKQLREHD-FYFPHNVDFRGRSYPIPPHLNHLGSDFCRAMLTFAEKKPLGARGL 701
Query: 468 RWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAA 527
WLK+HLANL G++K+S+D R+ FV++H+ D++DSADNP+NG RWWL A+ P+Q LA
Sbjct: 702 MWLKVHLANL--SGVDKVSFDDRIAFVDSHMADVYDSADNPLNGARWWLAADKPWQALAT 759
Query: 528 CINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYS 587
CI L+ A+RS P + +S LP+HQDGSCNGLQHYAALG DE A VNL+ KP DVYS
Sbjct: 760 CIELANAVRSGDPANFMSSLPLHQDGSCNGLQHYAALGGDEFGAFKVNLLPSPKPQDVYS 819
Query: 588 EIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIK 647
+A V + D+ +AK L+ ++ RK++KQTVMTSVYGVTYIGAR QI+
Sbjct: 820 GVAQLVSATVEHDAANGHE------VAKALLGKVQRKIIKQTVMTSVYGVTYIGARAQIQ 873
Query: 648 KRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHW 707
LEEK + DD +F A+ Y AK T +L ++F AR IM+WL CA IA + V W
Sbjct: 874 NALEEKYQMDDD-FVFQASSYLAKETFKSLDKMFLGARSIMAWLSQCASAIAKSGECVAW 932
Query: 708 TTPLGLPVVQPYCK 721
TPLGLPVVQPY K
Sbjct: 933 YTPLGLPVVQPYRK 946
>Q0QFS5_POLPA (tr|Q0QFS5) DNA-directed RNA polymerase (Fragment)
OS=Polysphondylium pallidum GN=mtRNAP PE=3 SV=1
Length = 862
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 247/701 (35%), Positives = 393/701 (56%), Gaps = 74/701 (10%)
Query: 51 LPRVKSLLLGWFEPLKEAVEAEQKAHQARSKKQQASIAPNVDS----------------- 93
L +K+++ W++PL + E K+ Q + S P ++
Sbjct: 74 LKSIKNVMFQWYDPLIKHTTQELKSFQQANASVLLSEDPEAEAEALNPLSRVPSHVEVLT 133
Query: 94 -LPAAKVAVIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKK 152
LP K+ +I +++M+S ++ + + + IG ++ E ++ + L+ LQ K+
Sbjct: 134 RLPMKKLCLIALNQMVSEILSDPQRGTIMTSIVENIGESVLAEYQM-QLLKKYDRLQYKR 192
Query: 153 TEADTEENLNNDKEKQRKFVNGLIK-----RKKLKEVHVVLKQEEVSPWSRAAQAKLGSR 207
K NG + + ++ H L+QE K+GS
Sbjct: 193 L---------------MKPFNGAVATVRTIQNYMRRAHNNLEQES------DTITKVGSF 231
Query: 208 LIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAG 267
+++ ++++ ++ ++ + + PAF + ++ + K YGVI C V +
Sbjct: 232 MVKSIMDSCMINKYID--GEDIDEKVPAFYYKYRYNNN-------KKYGVISCHDNVYSL 282
Query: 268 LEK---CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQ 324
+++ + + W +KG +L P +IMRT+GS+ Q+ ++
Sbjct: 283 MDEGHFLVEAMNARLLPMVVPPQPWTHPNKGCYLQYPCFIMRTNGSKLQK---TSLYQSD 339
Query: 325 MQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPTEDL---K 381
+ ++E L++LG + N +++ ++ W GG +A L + LP+ P EDL K
Sbjct: 340 LTNIYEGLNVLGEVPWKTNEKMMSILLEAWEKGGGIADLPSRYDFELPESPSQEDLQDEK 399
Query: 382 QIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPH 441
+++ ++RK K N + HS RCDT KL+VA++++ E FY+PHN+DFRGR+YP+ PH
Sbjct: 400 VKRDFNKKLRKVKGANNDLHSLRCDTLYKLNVAKQLQ-EYTFYFPHNVDFRGRSYPIPPH 458
Query: 442 LNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDI 501
LNH+GSD CR L+FAE + LG+ G WLK+ +ANL+ G++K+S++ R+ F +I +I
Sbjct: 459 LNHMGSDFCRSTLKFAEEKELGERGFEWLKVQVANLF--GVDKVSFEDRVAFTMENIENI 516
Query: 502 FDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHY 561
+DSAD P++G RWWL+A+ P+Q LAACI L++A+RS +P + S LPIHQDG+CNGLQHY
Sbjct: 517 YDSADRPLDGKRWWLKADSPWQTLAACIELTDAIRSGNPTTFKSSLPIHQDGTCNGLQHY 576
Query: 562 AALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQI 621
AALG DEL A VNL+ KP DVY+ +A V I+ D+ LAK+L +I
Sbjct: 577 AALGGDELGALKVNLLPSPKPQDVYTGVAQMVAQIVHEDA------LAGDELAKLLDGKI 630
Query: 622 DRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVF 681
+RK++KQTVMTSVYGVT++GAR QI+ L +K I D+ LF A Y +K T A+L ++F
Sbjct: 631 ERKIIKQTVMTSVYGVTFVGARMQIENALSDKYQI-DEATLFKATTYLSKTTFASLDKMF 689
Query: 682 EAARGIMSWLGDCAKVIAYEN-QAVHWTTPLGLPVVQPYCK 721
AR IM+WL CA +I+ + + V W TPLGLPVVQPY K
Sbjct: 690 IGARSIMAWLAQCAGLISKQTGECVAWYTPLGLPVVQPYRK 730
>C1MV11_MICPC (tr|C1MV11) DNA-directed RNA polymerase OS=Micromonas pusilla
(strain CCMP1545) GN=MICPUCDRAFT_17826 PE=3 SV=1
Length = 838
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 261/710 (36%), Positives = 387/710 (54%), Gaps = 52/710 (7%)
Query: 55 KSLLLGWFEPLKEAVEAEQKAHQAR-SKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVME 113
++ L + EPL A+E EQ + + + + P + L K+AVI +H ++S +M
Sbjct: 22 RNFLHNFLEPLSRAIEKEQAEIRKKVPGADRTNYGPFMLMLNPDKLAVITLHAVISQLMM 81
Query: 114 NEE-----------GCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLN 162
++ G + V+ ++G A++ EV + + + K +E +
Sbjct: 82 GDDRVKFSGDNGQVGKSKFVRVVERLGEAVQAEVNLSRLKQRGKVRPKDPSERERRFREE 141
Query: 163 NDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPV 222
+ R K L S W A+ KLGS L +LL+ETA + P
Sbjct: 142 TAGVSAKSLSKLTTVRSVAKFARRALND---SDWGMTARVKLGSVLAKLLVETAKIEVPD 198
Query: 223 NQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLE----KCAKHXXXX 278
+S + +I+PAF H ++ +R + YG++ P +E + A+
Sbjct: 199 PESGEL--EIKPAFEHHYEYVNRQ------QRYGMVSWHPAFFDYIEHEDMRHAQMSLVR 250
Query: 279 XXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSR-------------KQQDVMKNVKGEQM 325
+ W +D+GG+L +++MR + +R +Q+ + +
Sbjct: 251 YMPMVTPPRPWSRFDQGGYLCSETFVMRGNYTRLGPSWGQIMALLGEQKRSDSDGECASY 310
Query: 326 QKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQE 385
Q V +AL++LG T +N R +DV++ +W GG +AG+ V D+P D +
Sbjct: 311 QPVLDALNVLGKTPWVVNERTVDVMQKVWDDGGGIAGVPPRRTV---DEPVWPDPGEYVN 367
Query: 386 WKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHL 445
K RV K+ N E HSQRCD +KL VA++M+DE+ ++PHN+DFRGRAY MH HLNH+
Sbjct: 368 AKVRV---KRENRELHSQRCDFLIKLKVAQEMRDEEKIFFPHNIDFRGRAYTMHAHLNHI 424
Query: 446 GSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYA-GGIEKLSYDGRLGFVENHIHDIFDS 504
GSD+CRG L F E RPLG++GL WL + ANLYA GG++KL D R +++ + I S
Sbjct: 425 GSDVCRGALLFQEARPLGENGLDWLYVQAANLYAAGGVDKLPLDERREWMKTRLDRIKAS 484
Query: 505 ADNPVNGN----RWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQH 560
A +P+ + +WL AE+P+QCLA I ++ A+ S P S LP+HQDGSCNGLQH
Sbjct: 485 ARDPLCADDANCAFWLEAENPWQCLATFIEIAAAVDSGDPASYACRLPVHQDGSCNGLQH 544
Query: 561 YAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQ 620
YAALGRD VNL ++ P DVY+ +A + ++ D+ D S A A L
Sbjct: 545 YAALGRDIGGGEQVNLTPRDSPGDVYTGVANVLKRMVAEDA-ADASDPETAATAAALAPH 603
Query: 621 IDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEV 680
IDRKLVKQTVMTSVYGVT++GAR QI+ RL E+G I D+ L + A YA++ TL AL +
Sbjct: 604 IDRKLVKQTVMTSVYGVTHVGARQQIQSRLRERGAIEDESLRYRTANYASRRTLDALSNL 663
Query: 681 FEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLVSLL 730
F AR +MSWLG+CA+V++ + V WTTP+GLPVVQPY R +V +
Sbjct: 664 FVNAREVMSWLGECARVVSKGGKPVQWTTPMGLPVVQPYKAPSRKVVRTI 713
>R7SIE2_DICSQ (tr|R7SIE2) DNA/RNA polymerase OS=Dichomitus squalens (strain
LYAD-421) GN=DICSQDRAFT_130383 PE=4 SV=1
Length = 1273
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 261/731 (35%), Positives = 398/731 (54%), Gaps = 83/731 (11%)
Query: 54 VKSLLLGWFEPLKEAVEAE-----------QKAHQARSKKQQASIAPNVDSLPAAKVAVI 102
+KS + W + L++ ++AE + + +K ++ ++P + L K+++I
Sbjct: 344 LKSWMWEWHQKLQQRIKAEVENLIVEERILARMKRRSTKSEEILLSPFLRMLSPEKLSLI 403
Query: 103 VMHKMMSLVMENEEGCVQ----LVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEA--- 155
+ +MM+L + G VQ +A + +G A+E E + + N S+ A
Sbjct: 404 TIMEMMNL---HGSGGVQDGMKTARALLSVGRAVEAEHKAEICKKNNISIPVPAVNAPRA 460
Query: 156 DTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIET 215
+ D K L R+ ++ +E S WS+ + K+GS L++ +++
Sbjct: 461 GVQNIFTGDGYKD------LYARRVTAAKYMEDAEEWTSDWSQLIRVKVGSFLLDCIMDV 514
Query: 216 AYVHSPVN--QSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK--C 271
A V + ++ + + +PAF H ++ Q G+K+ GVI+ +P V + K
Sbjct: 515 ATVSRTIQDPRTGEKFTEEQPAFSHSYEYQR---GRKL----GVIKFNPAVADRMSKDPI 567
Query: 272 AKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNV-KGEQMQKVFE 330
A K W Y+ GG+L+ S+ MR SR+Q+ +++ + +++ VF
Sbjct: 568 ADTLHPRHLPMLVKPKPWLSYNNGGYLYSRSWAMRFKDSREQEIYLRHASEAGRLELVFA 627
Query: 331 ALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC-ENVPLPDKPPTEDLKQIQEWKY- 388
LD+LG+T +IN R+ DVV +W G A + + P P +P D + Y
Sbjct: 628 GLDVLGSTPWQINRRVFDVVLQVWNSGERFAKIPPAIPDEPEPVRPENMDTDNKAKVVYL 687
Query: 389 -RVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGS 447
R R+ + HS RC K+ +AR D Y PHN+DFRGRAYP+ PHL+H+G
Sbjct: 688 ERQRQWMQNKAANHSDRCSVNYKVEIARAFLG-DTIYLPHNVDFRGRAYPIPPHLSHIGD 746
Query: 448 DLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADN 507
DL RGLL F E +PLG GLRWLKIHLANLY G +K S+D R+ +V H+ DIFDSAD
Sbjct: 747 DLSRGLLIFEEKKPLGTRGLRWLKIHLANLY--GYDKASFDERVEYVHKHLEDIFDSADK 804
Query: 508 PVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRD 567
P+ G RWW +A+DP+QCLA C+ L+ ALRS P + LP+HQDG+CNGLQHYAALG D
Sbjct: 805 PLEGRRWWTKADDPWQCLATCMELTSALRSPDPEAYECGLPVHQDGTCNGLQHYAALGGD 864
Query: 568 ELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVK 627
AA VNL A ++P+DVY+ +A V + D KD +AK+L ++ RK+VK
Sbjct: 865 AQGAAQVNLAAADRPSDVYTYVANMVEKQIEEDIKKDDP------IAKLLEGKVSRKVVK 918
Query: 628 QTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGI 687
QTVMT+VYGVTY+GARDQI+++L+++G I + + ++A+ Y AK LA++G++F+ A+ I
Sbjct: 919 QTVMTTVYGVTYVGARDQIERQLKDRGDIPAE-MCWSASAYLAKNVLASIGDLFKGAKDI 977
Query: 688 MSWLGDCAKVIAY-------------------------------ENQAVHWTTPLGLPVV 716
+WL CA++IA + +V WTTPLGLP+V
Sbjct: 978 QNWLNLCARLIAKAIPQDRLVQSFTEPEKPNARSRKKEPRWKKEQMTSVVWTTPLGLPIV 1037
Query: 717 QPYCKTERHLV 727
QPY +R V
Sbjct: 1038 QPYRAVKRKQV 1048
>Q010X3_OSTTA (tr|Q010X3) DNA-directed RNA polymerase OS=Ostreococcus tauri
GN=Ot09g03980 PE=3 SV=1
Length = 973
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 288/783 (36%), Positives = 392/783 (50%), Gaps = 105/783 (13%)
Query: 18 RRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKAHQ 77
R+Q EAE A LP V+ LL ++ PL +A++ E +
Sbjct: 79 RKQREAENLACEREVARYKEFARKTFAAGIGAQLPVVQKLLASFYVPLVDAIKEEHE--- 135
Query: 78 ARSKKQQASIAPNVDS---------LPAAKVAVIVMHKMMSLVMENE------------- 115
+ S P VD L K+AV+ +H +S +M+ +
Sbjct: 136 -----KIKSNVPGVDRRVYGHYLALLEPEKLAVLTLHTTLSTLMKGDLRLDVPIFRGDDD 190
Query: 116 ---EGCVQLVQAAVQIGMALEQEVRIHKFLEG--------NKSLQSKKTEADTEENLNND 164
G + + A Q+G+ ++ EV + + KS Q AD + D
Sbjct: 191 TAASGSAKFITVAEQVGIVVQAEVNLGRMRAAEKIAKEAYKKSRQQTTLTADGGNAASKD 250
Query: 165 KEK---QRKFVNGLIKRKKLKEVHVVLKQE----EVSPWSRAAQAKLGSRLIELLIETAY 217
E+ QR +N + K+ + V K E + W R + K+G+ L+ L+ TA
Sbjct: 251 VEELVEQR--INLTLDTSKMNTIKSVSKHARNALENAEWGREIRVKVGTVLLNALMNTAK 308
Query: 218 VHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKIL----KNYGVIQCDPLVLAGLEKCAK 273
+ P PAF H + R G +L Y I + + A L K
Sbjct: 309 IGVPEENGGVL---TLPAFYHDY----REGGYGMLHWHDSIYRFINTETMTRAALVPV-K 360
Query: 274 HXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTH-----GSRKQQDVMK------NVKG 322
H ++W Y+ GG+L + MR SR Q ++ +K
Sbjct: 361 HFPMIVPP-----REWVRYNNGGYLRANTLCMRGKYSNEGPSRAQVQALEAKAREAELKN 415
Query: 323 EQM--QKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPTE-- 378
E + Q V +AL+ LG T ++N +L +VE +WA GG +A + + LP P
Sbjct: 416 EPVLYQPVLDALNALGRTPWQVNTDVLPIVEEVWARGGGIAEVPLRAELQLPRWPGGSYA 475
Query: 379 ---DLKQIQ-------------EWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDC 422
D + Q E+ VRK KK N+E HSQRCD +KL VAR+MK+E
Sbjct: 476 LRSDKNRFQLLASGLPGKGEVIEFLQSVRKTKKSNMELHSQRCDFLIKLQVAREMKNEPN 535
Query: 423 FYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGI 482
Y+PHNLDFRGRAY MH HLNH+GSDLCRGLL F+E +PLG+ GLRW+ I A L+ G
Sbjct: 536 IYFPHNLDFRGRAYTMHVHLNHIGSDLCRGLLRFSEKKPLGERGLRWMYIQCATLFGNGA 595
Query: 483 EKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNS 542
+KL D R+ F+ + I + SA +P+ WW AE+P+QCLA CI L +AL P
Sbjct: 596 DKLPMDERVQFIVDQIEQVRASAQDPLAKGAWWQDAEEPWQCLATCIELDKALELEDPTQ 655
Query: 543 VISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIA-----VRVHDIM 597
+S+LP+HQDGSCNGLQHYAALGRD AVNLV ++ ADVY+ IA + DI
Sbjct: 656 FLSNLPVHQDGSCNGLQHYAALGRDLHGGEAVNLVPADRGADVYTGIANVLKRIVADDIK 715
Query: 598 RRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLIT 657
DS+ + NA LA L IDRKLVKQTVMTSVYGVT+IGAR QI RL E+ ++
Sbjct: 716 LIDSDNE-EDVANAKLAMALAHHIDRKLVKQTVMTSVYGVTFIGARAQIYSRLREREVME 774
Query: 658 DDRLL-FTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVV 716
D+ LL + + YAA+ TL AL +F AR +M WL DCA + + V WTTPLGLPVV
Sbjct: 775 DNELLRYRVSTYAARRTLDALNNMFSNARDVMGWLTDCAAIATATGEPVRWTTPLGLPVV 834
Query: 717 QPY 719
QPY
Sbjct: 835 QPY 837
>R9ARS4_WALIC (tr|R9ARS4) Uncharacterized protein OS=Wallemia ichthyophaga EXF-994
GN=J056_000290 PE=4 SV=1
Length = 1311
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 263/732 (35%), Positives = 386/732 (52%), Gaps = 97/732 (13%)
Query: 74 KAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMEN--EEGCVQLVQAAVQIGMA 131
+ H+ + K I+P + L + K+A+I + +++ L EG ++ +A + +G A
Sbjct: 378 ETHKTKEDKFINEISPFLSLLSSEKMALITVLEILRLSGTGGIAEG-MKTTRALLSVGKA 436
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKF---------------VNGLI 176
+E E + L+ + K EAD ++ K K R F GLI
Sbjct: 437 VENEHHA-EILKSKHGVSLKGVEADAKQV----KRKLRYFDHKKAEKELDLKSPEFTGLI 491
Query: 177 --------------------KRKKLKEVHVVLKQEEVSP-WSRAAQAKLGSRLIELLIET 215
+ L VH +P WS+ + K+GS L++ L+E
Sbjct: 492 DEAMGTSTPDEHFAYPHDIASERALARVHEERMNRAWTPNWSQMIRIKVGSFLVDSLMEC 551
Query: 216 AYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK--CAK 273
A + ++ + + +PAF ++ G+K+ GVI+ + +V L+K
Sbjct: 552 ATITRIADRDGEEIKETQPAFSQSYQ---YVRGRKL----GVIKVNTVVADRLDKDPLGS 604
Query: 274 HXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFEAL 332
K W YD GG+LF ++ MR S +QQ + E M+ V L
Sbjct: 605 TIHPRHLPMLVKPKPWLRYDNGGYLFHKNFAMRFKDSNEQQSYIAKASNEGTMEPVLAGL 664
Query: 333 DILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKPPTEDLKQIQEWKYRVR 391
D+LG T +N ++ VV+ W G VA + + P P KP + Q Y +
Sbjct: 665 DVLGQTPWNVNQKVFAVVKQAWNSGEGVAKIPPATTHTPDPIKPSNYESDPKQRSNYLIS 724
Query: 392 KAKKMNLER--HSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDL 449
+N R HS RCDT KL +A+ +E FY+PH LDFRGRAYP+ PHLNH+G DL
Sbjct: 725 MKAVVNERRNNHSIRCDTNYKLEIAKAFLNE-TFYFPHTLDFRGRAYPIPPHLNHIGDDL 783
Query: 450 CRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPV 509
RGLL+FAE RPLG+ G+RWLKIHLAN+Y G +K S++ R F + H+ DI+DSAD P+
Sbjct: 784 SRGLLKFAETRPLGEKGMRWLKIHLANVY--GYDKASFNERENFADEHLADIYDSADRPL 841
Query: 510 NGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDEL 569
+G WWL+A+DP+QCLAAC + AL SS+P + S LP+HQDG+CNGLQHYAALG D +
Sbjct: 842 DGRGWWLKADDPWQCLAACYEIQAALESSNPLAYESSLPVHQDGTCNGLQHYAALGGDPM 901
Query: 570 EAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQT 629
A VNL ++P+DVY+ +A V +RRD+ D + F AK+L +I RK+VKQT
Sbjct: 902 GAKQVNLEQADRPSDVYTAVADLVIADIRRDAQTDDNAF-----AKLLEGKITRKVVKQT 956
Query: 630 VMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMS 689
VMT+VYGVT+IGARDQI K+L+++G I + L+++ A Y AK L ++G++F A I
Sbjct: 957 VMTTVYGVTFIGARDQIDKQLQDRGDIPRE-LIYSTASYLAKKVLRSIGDLFSGANAIQK 1015
Query: 690 WLGDCAKVIAY-------------------------------ENQAVHWTTPLGLPVVQP 718
WL A+ ++ + +V WTTPLGLP+VQP
Sbjct: 1016 WLSMSARYVSKSIPPERLVKALEPAEGRSASGKSTASRTSKEQMTSVIWTTPLGLPIVQP 1075
Query: 719 YCKTERHLVSLL 730
Y K ++ ++ L
Sbjct: 1076 YRKAKKKQIATL 1087
>D3B0H1_POLPA (tr|D3B0H1) DNA-directed RNA polymerase OS=Polysphondylium pallidum
GN=rpmA PE=3 SV=1
Length = 1010
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/495 (43%), Positives = 313/495 (63%), Gaps = 27/495 (5%)
Query: 234 PAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK---CAKHXXXXXXXXXXXXKKWK 290
PAF + ++ + K YGVI C V + +++ + + W
Sbjct: 270 PAFYYKYRYNNN-------KKYGVISCHDNVYSLMDEGHFLVEAMNARLLPMVVPPQPWT 322
Query: 291 GYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVV 350
+KG +L P +IMRT+GS+ Q+ ++ + ++E L++LG + N +++ ++
Sbjct: 323 HPNKGCYLQYPCFIMRTNGSKLQK---TSLYQSDLTNIYEGLNVLGEVPWKTNEKMMSIL 379
Query: 351 ESIWAGGGNVAGLVDCENVPLPDKPPTEDL---KQIQEWKYRVRKAKKMNLERHSQRCDT 407
W GG +A L + LP+ P EDL K +++ ++RK K N + HS RCDT
Sbjct: 380 LEAWEKGGGIADLPSRYDFELPESPSQEDLQDEKVKRDFNKKLRKVKGANNDLHSLRCDT 439
Query: 408 ELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGL 467
KL+VA++++ E FY+PHN+DFRGR+YP+ PHLNH+GSD CR +L+FAE + LG+ G
Sbjct: 440 LYKLNVAKQLQ-EYTFYFPHNVDFRGRSYPIPPHLNHMGSDFCRSMLKFAEEKELGERGF 498
Query: 468 RWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAA 527
WLK+ +ANL+ G++K+S++ R+ F +I +I+DSAD P++G RWWL+A+ P+Q LAA
Sbjct: 499 EWLKVQVANLF--GVDKVSFEDRVAFTMENIENIYDSADRPLDGKRWWLKADSPWQTLAA 556
Query: 528 CINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYS 587
CI L++A+RS +P + S LPIHQDG+CNGLQHYAALG DEL A VNL+ KP DVY+
Sbjct: 557 CIELTDAIRSGNPTTFKSSLPIHQDGTCNGLQHYAALGGDELGALKVNLLPSPKPQDVYT 616
Query: 588 EIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIK 647
+A V I+ D+ LAK+L +I+RK++KQTVMTSVYGVT++GAR QI+
Sbjct: 617 GVAQMVAQIVHEDA------LAGDELAKLLDGKIERKIIKQTVMTSVYGVTFVGARMQIE 670
Query: 648 KRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYEN-QAVH 706
L +K I D+ LF A Y +K T A+L ++F AR IM+WL CA +I+ + + V
Sbjct: 671 NALSDKYQI-DEATLFKATTYLSKTTFASLDKMFIGARSIMAWLAQCAGLISKQTGECVA 729
Query: 707 WTTPLGLPVVQPYCK 721
W TPLGLPVVQPY K
Sbjct: 730 WYTPLGLPVVQPYRK 744
>K5W1S5_PHACS (tr|K5W1S5) DNA-directed RNA polymerase OS=Phanerochaete carnosa
(strain HHB-10118-sp) GN=PHACADRAFT_261459 PE=3 SV=1
Length = 1324
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 256/715 (35%), Positives = 395/715 (55%), Gaps = 72/715 (10%)
Query: 54 VKSLLLGWFEPLKEAVEAEQ----KAHQARSKKQQAS-IAPNVDSLPAAKVAVIVMHKMM 108
++ L W + L+ V E KA A +++ S ++P + + K+++I + ++M
Sbjct: 411 LRGWLWQWHQKLQMRVAGEIQNLIKAEMALTERNAGSRLSPFLTLIKPEKLSLITILELM 470
Query: 109 SLVMENEEGC---VQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTE--ENLNN 163
L + G ++ +A + +G A+E E + + N ++ S T+ NL
Sbjct: 471 HL--QGAGGVSDGMKTARALISVGKAVEIEYKAEMCKKNNIAVPSPATQRQQSFFSNLGY 528
Query: 164 DKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYV-HSPV 222
+R+ L RK +++ +E S W++ + ++GS L++ L++ A V + +
Sbjct: 529 RALHERR----LAARKYMEDY-----EEWTSEWTQTIRVRVGSFLVDALMDVATVSRTAI 579
Query: 223 NQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK--CAKHXXXXXX 280
++ + + +PAF H ++ GQK+ GVI+ +P+V L K +
Sbjct: 580 DKHGELHTEEQPAFYHSYEYLR---GQKL----GVIKLNPVVADRLAKDQVRETLHPRHL 632
Query: 281 XXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFEALDILGNTK 339
K W +D+GG+L+ + +MR SR+QQ ++ + ++ V+ +LD+LG T
Sbjct: 633 PMLVRPKPWLSHDQGGYLYNKTSVMRYKDSREQQSYVREASSQGALELVYASLDVLGGTP 692
Query: 340 RRINGRLLDVVESIWAGGGNVAGLVDC-ENVPLPDKPPTEDLKQIQEWKYRVRKAKKMN- 397
+IN + DVV +W G + + + P P+KP D + Y R M+
Sbjct: 693 WKINRHIFDVVLKVWNSGERLGKIPPAMYDQPEPEKPADHDTDPKAKVAYLQRHKAYMSK 752
Query: 398 -LERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEF 456
HS RC+T K+ +AR D Y PHN+DFRGRAYP+ P+LNHLG DL RGLL+F
Sbjct: 753 KANNHSDRCNTNYKIEIARAFLG-DTVYLPHNVDFRGRAYPIPPNLNHLGDDLSRGLLKF 811
Query: 457 AEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWL 516
AE +PLG+ GLRW+KIHLANLY G +K S+D R+ FV H+ DIFDSA NP+ G WW
Sbjct: 812 AEAKPLGERGLRWMKIHLANLY--GYDKASFDERVVFVHEHLDDIFDSATNPLEGRGWWK 869
Query: 517 RAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNL 576
+A+DP+QCLA C+ + AL S P S LP+HQDG+CNGLQHYAALG D A VNL
Sbjct: 870 KADDPWQCLATCMEIRAALESPEPTEYASSLPVHQDGTCNGLQHYAALGGDAQGAQQVNL 929
Query: 577 VAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYG 636
++P+DVY+ +A V ++ +D+ D AK+L +I RK+VKQTVMT+VYG
Sbjct: 930 SVTDRPSDVYTHVATMVESVLAQDAKND------LRYAKMLSGKIARKVVKQTVMTTVYG 983
Query: 637 VTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAK 696
VT+IGARDQI+++L ++ + + + AA Y AK+TLA +G++F A+ I +WL AK
Sbjct: 984 VTFIGARDQIERQLRDRRDLPAEE-CWLAAAYLAKITLACIGDLFTGAKHIQNWLNLSAK 1042
Query: 697 VIAY---------------------------ENQAVHWTTPLGLPVVQPYCKTER 724
+I+ + +V WTTPLGLP+VQPY +T+R
Sbjct: 1043 LISKSIPPERIEEATKPSAKKGRVETRLKKEQMTSVIWTTPLGLPIVQPYRQTKR 1097
>D8QFG3_SCHCM (tr|D8QFG3) DNA-directed RNA polymerase OS=Schizophyllum commune
(strain H4-8 / FGSC 9210) GN=SCHCODRAFT_60184 PE=3 SV=1
Length = 1086
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 262/742 (35%), Positives = 392/742 (52%), Gaps = 97/742 (13%)
Query: 53 RVKSLLLGWFEPLKEAVEAEQKAHQARSKK-------------QQASIAPNVDSLPAAKV 99
R++ + W L+E + E K A KK Q I+P + + A ++
Sbjct: 119 RIQRWMWEWHMKLRERIGTEIKNITAFEKKNYSYGRPKAHLKYQAEMISPYLALVNAERL 178
Query: 100 AVIVMHKMMSLVMENEEGCV----QLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEA 155
+++ + ++M+L ++ G V + +A + +G A+E E + + ++ S +
Sbjct: 179 SLLTIMELMTL---HDTGGVTDGMKTARAVIAVGKAVEAEYKAQMCKRNHIAVPSSTRSS 235
Query: 156 DTE--ENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLI 213
D NL ++R+ + + +PWS +A++G LI+ L+
Sbjct: 236 DVSVFSNLGYSNLQERRVAAARLMEDG---------EAWTAPWSVHTRARVGGVLIDCLM 286
Query: 214 ETAYVHSPVNQSADTP--PDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGL--E 269
+TA V D + +PAF H ++ GQ++ GVI+ + V A + E
Sbjct: 287 DTAKVQRTAVDKNDGKILTEEQPAFYHSYE---YVQGQRL----GVIKLNQEVAAHMANE 339
Query: 270 KCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVK-GEQMQKV 328
K W Y+ GG+L+ +Y MR GSR+QQ +K+ Q + V
Sbjct: 340 WTIDTVHPRHLPMLVKPKPWLNYNDGGYLYHKTYAMRFKGSREQQAYLKHASDAGQCELV 399
Query: 329 FEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDK-PPTEDLKQIQEW 386
+ LD+LG+T +IN ++ DVV +W G L + P P+ P D ++ +W
Sbjct: 400 YAGLDVLGSTPWKINRKIFDVVLEVWNRGDRWGKLPPATFDEPEPEALSPDADSRKRADW 459
Query: 387 KYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLG 446
+ ++ + HS RC K+ +AR E FY PHNLDFRGRAYP+ PHLNH+G
Sbjct: 460 SHAMKLYNQAKQSNHSHRCSVNYKIEIARTFLGE-TFYQPHNLDFRGRAYPVPPHLNHIG 518
Query: 447 SDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSAD 506
DL RGLL FAE +PLG+ G RWLKIH+ANLY G +K S+D R+ +VE+ + D++DSA+
Sbjct: 519 DDLSRGLLMFAEKKPLGERGFRWLKIHIANLY--GFDKASFDERVQWVEDRLADVYDSAN 576
Query: 507 NPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGR 566
NP+NG RWWL A+DP+QCLAA + L +A+ S +P + S LP+HQDG+CNGLQHYAALG
Sbjct: 577 NPINGKRWWLEADDPWQCLAASMELRDAIESGNPLAFESSLPVHQDGTCNGLQHYAALGG 636
Query: 567 DELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNK-DPSTFPNALLAKVLIDQIDRKL 625
D AA VNL ++P+DVY+ + V IM D K DP +A +L +I RK+
Sbjct: 637 DPEGAAQVNLQKADRPSDVYTYVGRMVERIMEEDEKKGDP-------MAILLKGKISRKV 689
Query: 626 VKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAAR 685
VKQTVMT+VYGVT+IGARDQI+++L ++ I + + AA Y A+ LA +G++F A+
Sbjct: 690 VKQTVMTTVYGVTFIGARDQIERQLRDRKDIPPEH-CWGAATYLARKVLACIGDLFYGAK 748
Query: 686 GIMSWLGDCAKVIA-------------YENQ---------------------------AV 705
IM+WL CA++IA EN+ +V
Sbjct: 749 HIMTWLNLCARLIAKSIPMDRLQEMIVAENEQAKAKQDKRKRKDLGSKHKVLKREQMTSV 808
Query: 706 HWTTPLGLPVVQPYCKTERHLV 727
WTTP+GLP+ QPY K R V
Sbjct: 809 VWTTPMGLPIAQPYRKATRKQV 830
>F0XZ85_AURAN (tr|F0XZ85) DNA-directed RNA polymerase OS=Aureococcus
anophagefferens GN=AURANDRAFT_20280 PE=3 SV=1
Length = 902
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 260/702 (37%), Positives = 369/702 (52%), Gaps = 58/702 (8%)
Query: 54 VKSLLLGWFEPLKEAVEAEQKAHQARSKKQQASI-APNVDSLPAAKVAVIVMHKMMSLVM 112
V+ L+ W+EPL + AE+KA K I P + LP ++AV+ MH + L +
Sbjct: 111 VQRLMAQWYEPLVTRITAERKATLDGDKGGDLRIYGPLLLLLPPEQLAVLTMHTTIGLCL 170
Query: 113 ENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFV 172
++ + +G ++ E R+ K ++L+ ++ +A D E +R
Sbjct: 171 KHGPLGAKYSNLVTTLGETVQAEARVLKL----RNLRRERLKA------AEDAEGKRAVP 220
Query: 173 NGLIKRKKLKEV--HVV-------LKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN 223
+ + L + HVV L++ + + W +AKLGS L+ L++ A
Sbjct: 221 KTFLDARALARLPTHVVNSRAKRALEEGDDTDWPTITRAKLGSALVMALLDVA------K 274
Query: 224 QSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGL---EKCAKHXXXXXX 280
A +P H S +KI G+I+ +L+ E +
Sbjct: 275 DDAGSP-----LLEHTI---VYSNARKI----GIIRAKDELLSHARCPETIRRAAMPRFL 322
Query: 281 XXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKR 340
++W+ YD+GG L L + MRTHG Q + +N +G + V LD +G
Sbjct: 323 PMLVEPRRWRAYDEGGFLRLRAVAMRTHGCALQMEAFRNARGIE-GGVLAGLDAMGKVPW 381
Query: 341 RINGRLLDVVESIWAGGGNVAGLVDCENVPLP------------DKPPTEDLKQIQEWKY 388
+NG + D+V++ WA GG L E++ LP D K
Sbjct: 382 AVNGPVFDLVKAAWASGGKWPDLPSQEDLALPEPMDLAEALARADGDEDGGKKLYDAHLR 441
Query: 389 RVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSD 448
R + K+ N E HS RCDT LKLS+A + KDE FY+P+N+DFRGRAYP+ P+LNHLGSD
Sbjct: 442 RSARLKRRNAELHSLRCDTLLKLSIAEQFKDEAAFYFPYNVDFRGRAYPVPPNLNHLGSD 501
Query: 449 LCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNP 508
+CR +L FAE + LG GL WL+IHLANL+ G+ K S D R F H DI D+ + P
Sbjct: 502 VCRAMLTFAEAKRLGDDGLFWLRIHLANLF--GLSKKSLDDRAAFAVAHEADIRDAYERP 559
Query: 509 VNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDE 568
++GN WWL A++P+Q LAAC L+ A P LP+H DGSCNGLQHYAALGRD
Sbjct: 560 MDGNMWWLEADEPWQALAACRELARAAELDDPRDYECALPVHADGSCNGLQHYAALGRDH 619
Query: 569 LEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQ 628
VNL+ E P DVY + V + + R + D LA+++ I RK+VKQ
Sbjct: 620 EGGRQVNLLPGEAPRDVYEGVRALVAEKVARAATGD-EALETVRLAQIVDGLITRKVVKQ 678
Query: 629 TVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIM 688
TVMTSVYGVT++GAR QI RL + G + D+ L+ ACY A++TL L E+F +AR IM
Sbjct: 679 TVMTSVYGVTFVGARQQILGRLTDAGDV-DEAELYLCACYVARLTLEVLEELFTSARHIM 737
Query: 689 SWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLVSLL 730
WL CA++++ Q V W TPLGLPVVQPY + +H V L
Sbjct: 738 GWLAQCARLVSLHGQPVSWITPLGLPVVQPYRRDGQHAVKTL 779
>J4I8Q3_FIBRA (tr|J4I8Q3) DNA-directed RNA polymerase OS=Fibroporia radiculosa
(strain TFFH 294) GN=FIBRA_01835 PE=3 SV=1
Length = 1321
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 253/696 (36%), Positives = 382/696 (54%), Gaps = 85/696 (12%)
Query: 82 KQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC---VQLVQAAVQIGMALEQEVRI 138
K+ A ++P + L K+++I + ++M L + G ++ +A + +G A+E E
Sbjct: 428 KRSAGLSPFLSLLTPEKLSLIAIMELMHL--QGTGGVADGMKTARALLAVGKAVELE--- 482
Query: 139 HKFLEGNKS-LQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWS 197
HK KS L + T ++ + R + +K E ++ + W+
Sbjct: 483 HKAEMCKKSNLPIPTSSGRTSDHSFFTRLGYRDLQARRVAARKFMED----AEDWTTDWT 538
Query: 198 RAAQAKLGSRLIELLIETAYV-HSPVNQ-SADTPPDIRPAFRHGFKPQSRSPGQKILKNY 255
+ + K+GS L++ L++ A V + V++ + + + +PAF H ++ L+ Y
Sbjct: 539 QVVRVKVGSFLVDALMDVATVMRTGVDKRTGEAISEEQPAFFHSYE---------YLRGY 589
Query: 256 --GVIQCDPLVLAGLEKCAKHXXXXXXX-----XXXXXKKWKGYDKGGHLFLPSYIMRTH 308
GVI+ +PL+ EK AK K W +D+GG+L+ +++MR
Sbjct: 590 KLGVIKLNPLIS---EKMAKESIRETLHPRHLPMLVKPKPWLSHDQGGYLYNKTWVMRFK 646
Query: 309 GSRKQQDVMKNVKG-EQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE 367
S++QQ +++ ++ ++ +LD+LGNT +IN R+ D+V +W G +
Sbjct: 647 ESQEQQSYLRHASSLGNLELIYASLDVLGNTPWKINRRIFDIVLEVWNSGTRWCKIPPAA 706
Query: 368 -NVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLER---HSQRCDTELKLSVARKMKDEDCF 423
+ P P+KP D + Y R+ K+ L R HS RC K+ +AR D
Sbjct: 707 FDAPEPEKPENFDTDPRAKMIYLTRQ-KQYALGRANNHSDRCSVNYKIEIARAFLG-DTI 764
Query: 424 YYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIE 483
Y+PHN+DFRGRAYP+ PHL+H+G DL RGLL F E +PLG+ GLRWLKIHLANLY G +
Sbjct: 765 YFPHNVDFRGRAYPLPPHLSHIGDDLSRGLLMFGEAKPLGERGLRWLKIHLANLY--GYD 822
Query: 484 KLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSV 543
K ++D R+ FV +H+ DIFDSADNP+ G +WW +A+DP+QCLA CI L AL+S P++
Sbjct: 823 KANFDERVSFVHDHLDDIFDSADNPLEGKKWWTKADDPWQCLATCIELKAALQSPDPHTY 882
Query: 544 ISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNK 603
LP+HQDG+CNGLQHYAALG D A VNL ++P+DVY+ +A V M D
Sbjct: 883 ECALPVHQDGTCNGLQHYAALGGDAQGARQVNLDVTDRPSDVYTFVAEMVEKAMEEDVKL 942
Query: 604 DPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLF 663
D AK+L +I RK+VKQTVMT+VYGVT+IGAR+QI+K+L+++G I + +
Sbjct: 943 DHK------YAKMLTGKISRKVVKQTVMTTVYGVTFIGAREQIEKQLKDRGDIAAEE-CW 995
Query: 664 TAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAY----------------------- 700
AA Y AK L +G++F+ A+ I +WL CA++IA
Sbjct: 996 LAASYVAKKVLLCIGDLFKGAKDIQTWLNSCARLIAKSIPPDRLDAATDVERTFGTGRKM 1055
Query: 701 ------------ENQAVHWTTPLGLPVVQPYCKTER 724
+ +V WTTPLGLP+VQPY T R
Sbjct: 1056 VKSTEATRLKKEQMTSVVWTTPLGLPIVQPYRATRR 1091
>J5QJ77_TRIAS (tr|J5QJ77) DNA-directed RNA polymerase OS=Trichosporon asahii var.
asahii (strain ATCC 90039 / CBS 2479 / JCM 2466 / KCTC
7840 / NCYC 2677 / UAMH 7654) GN=A1Q1_03513 PE=3 SV=1
Length = 1321
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 258/697 (37%), Positives = 393/697 (56%), Gaps = 88/697 (12%)
Query: 91 VDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMALEQEVR--IHKFLEGNKS 147
+ +LP ++A+I + ++M ++ ++L++ + +G A+E E R + + + G KS
Sbjct: 434 LSTLPPKRLALITILELMRMIGSGGVNDGMKLLRGVMGVGRAIEAEYRADMIRSIAGEKS 493
Query: 148 -----LQSKKTEADTEENLNN-------DKEKQRK-FVNGLIKRKKLKEVHVVLKQEEVS 194
+ KT+ + N+ + ++EK+ K +G + L+
Sbjct: 494 RLWQKVIDPKTQKPSRLNVESTWKEIGREREKEAKESSDGAAAQSVKAGPESDLRAVWTP 553
Query: 195 PWSRAAQAKLGSRLIELLIETAYV--HSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKIL 252
PWS Q +G+ L+E LI+TA V H + + + +PAF H F+ G+K+
Sbjct: 554 PWSGMVQMSIGTHLVEALIKTARVVRHGTDPLTGEQVTEKQPAFAHSFE---YVRGRKL- 609
Query: 253 KNYGVIQCDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGS 310
GVI+ +P+V L + + WK +++G +L +P+ +MR S
Sbjct: 610 ---GVIKANPVVAKRLANDSVRQVISPKHLPMLVPPNSWKAWNQGPYLTIPTTMMRFKDS 666
Query: 311 RKQQDVMKNV-KGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLV----D 365
+Q++ ++ K ++ VF LD+L +T RIN + +VV W G +A +
Sbjct: 667 VEQKNYLEAASKSGHLEPVFHGLDVLSSTPWRINRNVFEVVLKAWNDGDAIADIPATAEK 726
Query: 366 CENVPLPDKP--PTEDLKQIQEWKYRVRKAKKMNLER---HSQRCDTELKLSVARKMKDE 420
CE V +P+KP P + K+ ++Y V+ K+++L++ H++RC L +AR +
Sbjct: 727 CEIV-IPEKPDDPNDPTKR---YEY-VQAMKQLSLQQRKNHAERCKYNYNLEIARSYIN- 780
Query: 421 DCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAG 480
D FY PHNLDFRGRAYP+ PHL+ +G DLCRGLL F +PLG++GLRWL+IHLANLY
Sbjct: 781 DVFYIPHNLDFRGRAYPIPPHLSPVGDDLCRGLLTFGVKKPLGENGLRWLQIHLANLY-- 838
Query: 481 GIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSP 540
G +K S+D R+ F ++H+ DIFDSAD+P++G RWWL+AEDP+QCLAAC L+ ALRS P
Sbjct: 839 GYDKASFDERVQFSKDHVEDIFDSADHPLDGKRWWLQAEDPWQCLAACFELAGALRSGDP 898
Query: 541 NSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRD 600
+ S LP+HQDG+CNG+QHYAALG D A AVNL ++PAD+YS + V++ + D
Sbjct: 899 SKFESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEQGDRPADIYSTVLALVNESIEAD 958
Query: 601 SNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDR 660
K P ALL K + + RK+VKQTVMT+VYGVT++GARDQI K+L +G ++ D
Sbjct: 959 QKKG---VPTALLIK---NPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLRARGDMSSDD 1012
Query: 661 LLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI-------------AYENQ---- 703
+ T+A Y AK L ++G +F AR I WL + A+++ A E +
Sbjct: 1013 VWITSA-YIAKKVLNSIGSLFFGARAIQDWLTNTARLVSRAIPADRLEDATAAETKRPRG 1071
Query: 704 -------------------AVHWTTPLGLPVVQPYCK 721
+V WT+PLGLPVVQPY K
Sbjct: 1072 PRPGPKSQVKSRIAKELMTSVVWTSPLGLPVVQPYRK 1108
>K1VKV7_TRIAC (tr|K1VKV7) DNA-directed RNA polymerase OS=Trichosporon asahii var.
asahii (strain CBS 8904) GN=A1Q2_04313 PE=3 SV=1
Length = 1321
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 258/697 (37%), Positives = 393/697 (56%), Gaps = 88/697 (12%)
Query: 91 VDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMALEQEVR--IHKFLEGNKS 147
+ +LP ++A+I + ++M ++ ++L++ + +G A+E E R + + + G KS
Sbjct: 434 LSTLPPKRLALITILELMRMIGSGGVNDGMKLLRGVMGVGRAIEAEYRADMIRSIAGEKS 493
Query: 148 -----LQSKKTEADTEENLNN-------DKEKQRK-FVNGLIKRKKLKEVHVVLKQEEVS 194
+ KT+ + N+ + ++EK+ K +G + L+
Sbjct: 494 RLWQKVIDPKTQKPSRLNVESTWKEIGREREKEAKESSDGAAAQSVKAGPESDLRAVWTP 553
Query: 195 PWSRAAQAKLGSRLIELLIETAYV--HSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKIL 252
PWS Q +G+ L+E LI+TA V H + + + +PAF H F+ G+K+
Sbjct: 554 PWSGMVQMSIGTHLVEALIKTARVVRHGTDPLTGEQVTEKQPAFAHSFE---YVRGRKL- 609
Query: 253 KNYGVIQCDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGS 310
GVI+ +P+V L + + WK +++G +L +P+ +MR S
Sbjct: 610 ---GVIKANPVVAKRLANDSVRQVISPKHLPMLVPPNPWKAWNQGPYLTIPTTMMRFKDS 666
Query: 311 RKQQDVMKNV-KGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLV----D 365
+Q++ ++ K ++ VF LD+L +T RIN + +VV W G +A +
Sbjct: 667 VEQKNYLEAASKSGHLEPVFHGLDVLSSTPWRINRNVFEVVLKAWNDGDAIADIPATAEK 726
Query: 366 CENVPLPDKP--PTEDLKQIQEWKYRVRKAKKMNLER---HSQRCDTELKLSVARKMKDE 420
CE V +P+KP P + K+ ++Y V+ K+++L++ H++RC L +AR +
Sbjct: 727 CEIV-IPEKPDDPNDPTKR---YEY-VQAMKQLSLQQRKNHAERCKYNYNLEIARSYIN- 780
Query: 421 DCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAG 480
D FY PHNLDFRGRAYP+ PHL+ +G DLCRGLL F +PLG++GLRWL+IHLANLY
Sbjct: 781 DVFYIPHNLDFRGRAYPIPPHLSPVGDDLCRGLLTFGVKKPLGENGLRWLQIHLANLY-- 838
Query: 481 GIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSP 540
G +K S+D R+ F ++H+ DIFDSAD+P++G RWWL+AEDP+QCLAAC L+ ALRS P
Sbjct: 839 GYDKASFDERVQFSKDHVEDIFDSADHPLDGKRWWLQAEDPWQCLAACFELAGALRSGDP 898
Query: 541 NSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRD 600
+ S LP+HQDG+CNG+QHYAALG D A AVNL ++PAD+YS + V++ + D
Sbjct: 899 SKFESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEQGDRPADIYSTVLALVNESIEAD 958
Query: 601 SNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDR 660
K P ALL K + + RK+VKQTVMT+VYGVT++GARDQI K+L +G ++ D
Sbjct: 959 QKKG---VPTALLIK---NPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLRARGDMSSDD 1012
Query: 661 LLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI-------------AYENQ---- 703
+ T+A Y AK L ++G +F AR I WL + A+++ A E +
Sbjct: 1013 VWITSA-YIAKKVLNSIGSLFFGARAIQDWLTNTARLVSRAIPADRLEDATAAETKRPRG 1071
Query: 704 -------------------AVHWTTPLGLPVVQPYCK 721
+V WT+PLGLPVVQPY K
Sbjct: 1072 PRPGPKSQVKSRIAKELMTSVVWTSPLGLPVVQPYRK 1108
>M1V872_CYAME (tr|M1V872) DNA-directed RNA polymerase OS=Cyanidioschyzon merolae
strain 10D GN=CYME_CMJ257C PE=3 SV=1
Length = 1252
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 265/709 (37%), Positives = 385/709 (54%), Gaps = 76/709 (10%)
Query: 57 LLLGWFEPLKEAVEAEQKAHQARSKKQQAS-----IAPNVDSLPAAKVAVIVMHKMMSLV 111
LLL WF P+ A+ EQ+ R ++ + S P++ L +AVI +H+ + V
Sbjct: 458 LLLSWFFPVTMAIHQEQE----RIRRGELSYDGNVCGPHLLRLKPEVLAVIALHETLGRV 513
Query: 112 MENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKF 171
+++ G V ++ A +G +++ E+ + + E L S++ L D+ +R
Sbjct: 514 LQDRAG-VAFIRVASAVGRSVQAEINLQRLRE----LHSEQRH----RQLPQDRALRRTL 564
Query: 172 V---NGLIKRKKLKEVHVVLKQEEV--SPWSRAAQAKLGSRLIELLIETAYVHSPVNQSA 226
G + + +++ K+ E+ + W + K+GS LI +++ A +H
Sbjct: 565 ALASTGSGGSRAVAAINLAAKRMELDTATWDDSVTIKVGSVLISFVMKHALIH------I 618
Query: 227 DTPPDIRP--AFRHGFKPQSRSPGQKILKNYGVIQCDP----LVLAGLEKCAKHXXXXXX 280
DTP + AFRHG++P R P + GVI+ L+LA +
Sbjct: 619 DTPTGKQAVQAFRHGYRPLQREP-----RKVGVIELHKSVLNLLLANESDLRETILPRFQ 673
Query: 281 XXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKR 340
+ W Y+ GG+L +MR GSR Q + +K KG+ + +VF L+ LG T
Sbjct: 674 PMLVPPRPWTAYNSGGYLRPRGLVMRVRGSRLQLEALK--KGD-LSEVFAGLNALGATPW 730
Query: 341 RINGRLLDVVESIWAGGGNVAGLVDCENVPLP-------DKPP--------TEDLKQIQE 385
RIN +LDVVE +W GG++AGLV ++ LP D P TE L + E
Sbjct: 731 RINRPVLDVVEKLWRAGGDIAGLVARADLQLPALAESVVDPAPDGKESAASTESLSR--E 788
Query: 386 WKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHL 445
+ + + +K N ERH+ RC+ +L AR+ D FY PHNLDFRGRAYPM HL+H+
Sbjct: 789 QRRAIWRIRKTNRERHALRCELHYRLETAREFADVSRFYLPHNLDFRGRAYPMPSHLHHM 848
Query: 446 GSDLCRGLLEFA-EGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDS 504
SD+CRGLL FA G +G+ GL W+K+HLANL G++KL +D R+ F E+ + +
Sbjct: 849 SSDVCRGLLTFAGPGLRVGERGLFWMKVHLANLC--GMDKLPFDERVAFAESVMPKVLAV 906
Query: 505 ADNPVNGN--RWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYA 562
A P + WW + EDPFQ LAAC L+ A P+ S LPI QDGSCNGLQHYA
Sbjct: 907 AAAPTADSNLEWWAQQEDPFQLLAACFELAAAKGGLDPD-YHSTLPIQQDGSCNGLQHYA 965
Query: 563 ALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQID 622
ALGRDE VNL+ E+P DVYS +A V + + D+ + +A++L +I
Sbjct: 966 ALGRDERGGYQVNLLPSERPQDVYSGVAELVRERVAHDARE------GVPIAQLLQGRIS 1019
Query: 623 RKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFE 682
RK+VKQTVMTSVYGVT IGAR+QI+ RL E +++ + A+ Y AK TL +LG++F
Sbjct: 1020 RKIVKQTVMTSVYGVTLIGAREQIQNRLRELPDFPEEK-TWEASFYLAKQTLGSLGDIFR 1078
Query: 683 AARGIMSWLGDCAKVIAYENQ---AVHWTTPLGLPVVQPYCKTERHLVS 728
A M WL +CA +A + AV W TPLGLPV+QPY + E LV+
Sbjct: 1079 GATDTMEWLAECALRVATSKERTNAVRWITPLGLPVIQPYRRREARLVN 1127
>F0WKU6_9STRA (tr|F0WKU6) DNA-directed RNA polymerase OS=Albugo laibachii Nc14
GN=AlNc14C137G7135 PE=3 SV=1
Length = 1012
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 266/761 (34%), Positives = 399/761 (52%), Gaps = 88/761 (11%)
Query: 5 QEVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEP 64
QEV++ + A RQI E + A + ++L++GW EP
Sbjct: 160 QEVKDLKRLFA---RQIRLECAIYDMAVEKHLAVRQDVGKLGRASQVNAAQNLVVGWMEP 216
Query: 65 LKEAVEAEQKAHQARSKKQQASI-APNVDSLPAAKVAVIVMHKMMSLVMENEEGCVQLVQ 123
+ EQ+ A + +SI P + L A +A + ++ M++ + + +G + ++
Sbjct: 217 AIALISNEQRDVLAGKRSLDSSIYGPALLLLDAKVLAALSINTMLNNCLVDSKGA-RFIK 275
Query: 124 AAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGL---IKRKK 180
A+ +G +++ + ++K+ D+E+ V G+ + RK
Sbjct: 276 LALALGNIVQEHI-----------CENKRKRKDSEKYF-------LSLVRGIQNDVFRKH 317
Query: 181 LKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSA-------------D 227
++ V+ W + K+G+ LI+ + + YV + Q+A +
Sbjct: 318 MENVYTT-----AGYWDKRLNLKVGAALIDFIQRSCYVPDRLLQAAGRKVHGTLEEHDPE 372
Query: 228 TPPDIRPAFRHGFKPQSRSPGQKILKNYGVI-----QCDPLVLAGLEKCAKHXXXXXXXX 282
PP AF H + + R+ + K + I DP + L A++
Sbjct: 373 KPPKKEQAFVHCYYYE-RNRRSGMFKMHDTIFNLILNTDP-GMNVLPWTARYLPMLVPP- 429
Query: 283 XXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDV---MKNVKGEQMQKVFEALDILGNTK 339
K+W+ + GG+L L + IMR Q+D+ M VK +Q+VF L++L
Sbjct: 430 ----KRWENPNNGGYLKLHTKIMR------QRDIVWQMDCVKRAPLQEVFTTLNLLAEVP 479
Query: 340 RRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPT--EDLKQIQEWKYRVRKAKKMN 397
IN +LDV+ IW GG L E+ P PD P ED ++ Q K ++ N
Sbjct: 480 WVINQEILDVILRIWQEGGGFGDLPSREDFPFPDNKPEDEEDPEKRQALAKAHAKVRQRN 539
Query: 398 LERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFA 457
E HS RCDT KL VA++ ++E Y+P+NLDFRGR YP+ P+LNHLGSD+ R LL F
Sbjct: 540 RELHSLRCDTLYKLQVAQEFRNEKEIYFPYNLDFRGRVYPIPPNLNHLGSDMSRSLLLFR 599
Query: 458 EGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNP--VNGNRWW 515
+ +PLGK GLRWLKIHLAN++ G++K S+D R+ F E+++ +F SA +P V WW
Sbjct: 600 DRKPLGKDGLRWLKIHLANVF--GVDKCSFDERVAFTESNLTKVFASARDPHGVGDAVWW 657
Query: 516 LRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVN 575
AE PF L C L AL S P + +S++P+HQDGSCNGLQHYAALGRD VN
Sbjct: 658 KTAEYPFLALGVCFELKRALNSPDPETYLSNIPVHQDGSCNGLQHYAALGRDLKGGEQVN 717
Query: 576 LVAKEKPADVYSEIAVRVHDIMRRDSN----------KDPSTFPNALLAKVLIDQIDRKL 625
LV +P DVY ++A +V D++ RD+N + S A L+ I R++
Sbjct: 718 LVPASRPGDVYIKVAEQVMDLVNRDANLEIPEDATPERKLSLAHRKRCATFLLGTITRRV 777
Query: 626 VKQTVMTSVYGVTYIGARDQIKKRLEEKGL----ITD---DRLLFTAACYAAKVTLAALG 678
VKQTVMTSVYGVT+IGAR QI+ RL+E L ++D D+ ++ ++CYAA++T+ +L
Sbjct: 778 VKQTVMTSVYGVTFIGARKQIQARLQEANLSNGNLSDEEMDQQVYDSSCYAAEITMESLR 837
Query: 679 EVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPY 719
+F +AR IM WLGDCA +A E Q + W TPLGLPVVQPY
Sbjct: 838 NLFTSARNIMEWLGDCASKVAEEGQLMSWITPLGLPVVQPY 878
>F0ZVB9_DICPU (tr|F0ZVB9) DNA-directed RNA polymerase OS=Dictyostelium purpureum
GN=DICPUDRAFT_95344 PE=3 SV=1
Length = 862
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/451 (47%), Positives = 289/451 (64%), Gaps = 22/451 (4%)
Query: 289 WKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLD 348
W +G +L I+R +G++ Q + ++ + +++ AL++LGNT IN + D
Sbjct: 302 WISPFEGPYLHYKVPILRANGNKSQ---ITSLLKSDLSQIYRALNVLGNTPWVINKKAYD 358
Query: 349 VVESIWAGGGNVAGL---VDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRC 405
++ W GG++A + ++ E PLP+ T L ++ +K K+N + HS R
Sbjct: 359 IINEAWEAGGDIADMPRKINYEYPPLPEDVLTS-LSSRKKHFLLEKKISKLNKDLHSLRS 417
Query: 406 DTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKS 465
D + KL VA K D Y+PHNLDFRGR+YP+ PHLNHLGSDLCR LL+F + +PLGK
Sbjct: 418 DCKYKLEVAEKFLDH-TIYFPHNLDFRGRSYPIPPHLNHLGSDLCRSLLKFEKSKPLGKR 476
Query: 466 GLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCL 525
GL WLKI ++NLY G++K+S+ R+ F +I +I DSADNP+ G RWWL A+ P+Q L
Sbjct: 477 GLDWLKIQISNLY--GVDKVSHADRIKFTTENIENIMDSADNPLKGKRWWLNADYPWQAL 534
Query: 526 AACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADV 585
AACI L+EALRS +P S+LPIHQDG+CNGLQHYAALG DEL A VNL+ +KP DV
Sbjct: 535 AACIELTEALRSPNPEEFCSNLPIHQDGTCNGLQHYAALGGDELGAIKVNLIPSDKPQDV 594
Query: 586 YSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQ 645
Y+ +A V +I+ +++ + A +IDRKLVKQTVMTSVYGVTYIGAR+Q
Sbjct: 595 YTGVAGLVAEIVEKEAEEGNK------FAIFFRGRIDRKLVKQTVMTSVYGVTYIGAREQ 648
Query: 646 IKKRLEEK------GLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIA 699
I L+EK L DD +F+A+ Y K T AL +F AR IM+WL +CA +IA
Sbjct: 649 IHSSLKEKLDEETNPLEIDDEFMFSASSYITKHTFRALNNMFFGARSIMAWLSECAVLIA 708
Query: 700 YENQAVHWTTPLGLPVVQPYCKTERHLVSLL 730
V+W TPLGLPVVQPY KT ++ V +L
Sbjct: 709 KSGHPVNWITPLGLPVVQPYRKTSKNSVKIL 739
>F8QAA1_SERL3 (tr|F8QAA1) DNA-directed RNA polymerase OS=Serpula lacrymans var.
lacrymans (strain S7.3) GN=SERLA73DRAFT_114135 PE=3 SV=1
Length = 986
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 248/707 (35%), Positives = 386/707 (54%), Gaps = 82/707 (11%)
Query: 65 LKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----Q 120
++E + AE+KA S+ + ++ P + + +K+++I + ++M L N G V +
Sbjct: 86 IQEIIVAEEKAD---SRGKGTNLGPFLQLVKPSKLSLITILEIMRL---NGSGGVSDGMK 139
Query: 121 LVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKR-- 178
+A + +G A+E E + N ++ S+ + + F G R
Sbjct: 140 TARALLTVGRAVENEYKAQMCKRNNIAIPSQS------------RPGEYGFFTGFGYRDL 187
Query: 179 --KKLKEVHVVLKQEE-VSPWSRAAQAKLGSRLIELLIETAYVHSPV--NQSADTPPDIR 233
+++ + EE + W++ + ++GS L++ L++ A V ++ +T + +
Sbjct: 188 HARRVTAAKYTMDSEEWTTEWTQLLRVRVGSILVDCLMDVATVTRTAIDKRTQETISEDQ 247
Query: 234 PAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK--CAKHXXXXXXXXXXXXKKWKG 291
PAF H ++ GQK+ GVI+ +P+V + K + K W
Sbjct: 248 PAFYHAYE---YVRGQKL----GVIRLNPVVADRIAKDGLRETLHPRHLPMLVKPKPWLN 300
Query: 292 YDKGGHLFLPSYIMRTHGSRKQQDVMKNVKG-EQMQKVFEALDILGNTKRRINGRLLDVV 350
YD+GG+L+ S MR S++QQ +++ ++ V+ LD+LG+T +IN + DVV
Sbjct: 301 YDQGGYLYNKSSAMRFKDSQEQQSYLQHASELGNVELVYAGLDVLGSTPWKINRNVFDVV 360
Query: 351 ESIWAGGGNVAGLV-DCENVPLPDKPP--TEDLKQIQEWKYRVRKAKKMNLERHSQRCDT 407
++W G + L + P P+KP + D+K + R++ + HS RC
Sbjct: 361 LTVWNSGERLCKLPPSVFDQPEPEKPDNLSMDIKAKSVYGQRLKAYMQAKANNHSDRCSV 420
Query: 408 ELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGL 467
K+ +AR D Y PHNLDFRGRAYP+ PHLNH+G DL RGLL F E +PLG+ GL
Sbjct: 421 NYKIEIARAFLG-DTMYLPHNLDFRGRAYPIPPHLNHIGDDLSRGLLMFGEAKPLGERGL 479
Query: 468 RWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAA 527
RWLKIHLANLY G +K ++D R+ +V + +++DSA+ P+ G RWW +A+DP+QCLA
Sbjct: 480 RWLKIHLANLY--GFDKANFDERVEYVMERLDEVYDSAEKPLEGRRWWTKADDPWQCLAT 537
Query: 528 CINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYS 587
C+ L AL S P + +S LP+HQDG+CNGLQHYAALG D A VNL E+P+DVY+
Sbjct: 538 CMELRAALESEDPEAYMSSLPVHQDGTCNGLQHYAALGGDNRGAQQVNLSVTERPSDVYT 597
Query: 588 EIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIK 647
+A V + D+ D AK+L ++ RK+VKQTVMT+VYGVTYIGARDQI+
Sbjct: 598 YVANMVQRQLDEDAANDHK------YAKMLQGKVARKVVKQTVMTTVYGVTYIGARDQIE 651
Query: 648 KRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAY------- 700
++L+++ I ++ + AA Y AK TL +G++F A+ I +WL CA+++A
Sbjct: 652 RQLKDRKDIPEEE-CWNAAAYLAKKTLFCIGDLFSGAKAIQTWLNLCARLVAKSIPAERI 710
Query: 701 -----------------------ENQAVHWTTPLGLPVVQPYCKTER 724
+ +V WTTPLGLP+VQPY K +R
Sbjct: 711 PEALEAEKTKRRLPVSTNRIRKEQMTSVVWTTPLGLPIVQPYRKVKR 757
>Q95NZ8_DICDI (tr|Q95NZ8) DNA-directed RNA polymerase OS=Dictyostelium discoideum
GN=rpmA PE=2 SV=1
Length = 950
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/447 (46%), Positives = 283/447 (63%), Gaps = 18/447 (4%)
Query: 289 WKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLD 348
W +G +L IMRT+GS Q ++ + M ++ AL+ILG T IN L +
Sbjct: 394 WITPTEGPYLHYKVPIMRTNGSAMQ---LRTLVDSDMSLIYRALNILGETPWVINRDLYN 450
Query: 349 VVESIWAGGGNVAGLVDCENVPLPDKPPTE--DLKQIQEWKYRVRKAKKMNLERHSQRCD 406
V+ WA GGN+ + + P+ D + +E + ++ K +N HS RCD
Sbjct: 451 VILEAWANGGNIGDIPKRTDFEYPEISDDMLFDHEARKELYKKEQRIKSLNFNLHSLRCD 510
Query: 407 TELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSG 466
T KL VARK D Y+PHN+DFRGR+YP+ PHLNHLGSD CR LL+F + PLG+ G
Sbjct: 511 TNYKLEVARKFLDH-TLYFPHNIDFRGRSYPIPPHLNHLGSDFCRSLLKFEKSLPLGEKG 569
Query: 467 LRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLA 526
L WLKIH+ANLY G++K+ + RL F E ++ +IFDS D+P+NGN+WWL+A++P+Q LA
Sbjct: 570 LEWLKIHVANLY--GVDKIPLNERLAFTERNMENIFDSVDSPLNGNKWWLKADNPWQTLA 627
Query: 527 ACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVY 586
AC+ L++A+RS P +S+LPIHQDG+CNGLQHYAALG D A VNL+ + P DVY
Sbjct: 628 ACMELTKAIRSGKPAEFLSNLPIHQDGTCNGLQHYAALGGDVWGAEKVNLLPSDCPQDVY 687
Query: 587 SEIAVRVHDIMRRDS-NKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQ 645
S +A V I+ D+ N D +A+ + ++DRKLVKQTVMTSVYGVTYIGAR+Q
Sbjct: 688 SSVAQLVEQIVEEDAKNGDE-------IAQFFLGKVDRKLVKQTVMTSVYGVTYIGAREQ 740
Query: 646 IKKRLEEK--GLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQ 703
I+ + EK L D+ +F ++ Y K T A+L +F AR IM W+ DCA +IA
Sbjct: 741 IENAILEKFSDLDLDEDFIFKSSTYITKNTFASLNNMFVGARSIMKWMSDCATLIAKSGH 800
Query: 704 AVHWTTPLGLPVVQPYCKTERHLVSLL 730
V W TPLGLPVVQPY K ++ + L
Sbjct: 801 CVTWNTPLGLPVVQPYKKGGKYNIRTL 827
>K3WD80_PYTUL (tr|K3WD80) DNA-directed RNA polymerase OS=Pythium ultimum
GN=PYU1_G002918 PE=3 SV=1
Length = 1018
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 264/753 (35%), Positives = 390/753 (51%), Gaps = 82/753 (10%)
Query: 16 LRR---RQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAE 72
LRR RQ+ E + A N K L+ W P +E +E E
Sbjct: 165 LRRLYARQLRLECSVYEMAMEKHETSTLKVRQIGRASNTNAAKDLIRNWMIPAREFIENE 224
Query: 73 QKAHQARSKKQQASI-APNVDSLPAAKVAVIVMHKMMSLVMENEEGCVQLVQAAVQIGMA 131
QK + ++I P + L A +A M+ M++ + + G + ++ A+ +G A
Sbjct: 225 QKKIRDGKHSMDSNIYGPALLMLKADVLAATGMNVMLNTCLGDAHG-PKFIKLALAMGKA 283
Query: 132 LEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQE 191
+++E+ + K +++K + + L + +FV + K+K H +
Sbjct: 284 IQEEIIVQK-------ERAEKRGGENKFYLQVTARIESEFV-----KAKMKAYH-----D 326
Query: 192 EVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKI 251
+V W + K+G+ LI+ + + ++ PV + + + +PAF H + +
Sbjct: 327 DVGGWDKRINLKVGAALIDCIQRSCFI--PVEKGSKEMSN-QPAFVHDYVFERN------ 377
Query: 252 LKNYGVIQCDPLVLAGLEKCAKHX-----XXXXXXXXXXXKKWKGYDKGGHLFLPSYIMR 306
+ GVI+ P + + K W GG+L L + IMR
Sbjct: 378 -RRAGVIKIHPTIANAVLSTKPGANILPWTARYLPMLVPPKNWDSVVNGGYLKLHTKIMR 436
Query: 307 THGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC 366
S Q D +K +GE M ++F++L++L + IN +LDV+ +W GG L
Sbjct: 437 QRDSAWQMDCVK--RGE-MDQLFKSLNLLASVPWVINTDVLDVILKVWENGGGFGDLPQR 493
Query: 367 ENVPLPD-KPPTE-DLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFY 424
++ P+ K E D ++ ++ VRK ++ N E HS RCDT KL VA + K E Y
Sbjct: 494 TDIEPPEWKAEYEHDAEKRDTYEKMVRKIQQRNQELHSLRCDTLYKLQVAEEFKHEKALY 553
Query: 425 YPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEK 484
YP+N+DFRGR YP+ P+LNHLGSDL R LL F + +PLGK+GLRW+KIHLAN++ G++K
Sbjct: 554 YPYNMDFRGRVYPIPPNLNHLGSDLSRSLLIFRDRKPLGKNGLRWMKIHLANVF--GVDK 611
Query: 485 LSYDGRLGFVENHIHDIFDSADNPVNGN--RWWLRAEDPFQCLAACINLSEALRSSSPNS 542
S+D R+ F + ++ SA +P WW A+ PF L C L AL S P
Sbjct: 612 CSFDERVEFTDANLSKAIASACDPFGEGDCAWWKDADYPFLALGVCFELKRALESPDPEK 671
Query: 543 VISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSN 602
S++PIHQDGSCNGLQHYAALGRD L VNLV +P+DVY+ +A +V + RD+
Sbjct: 672 YESNIPIHQDGSCNGLQHYAALGRDALGGQQVNLVPAPRPSDVYTGVATQVMRKVERDAA 731
Query: 603 KD-PSTFPNA----------------------------LLAKVLIDQIDRKLVKQTVMTS 633
+ P P+ A+ L+ I RK+VKQTVMTS
Sbjct: 732 MELPEIIPDMERILDDDSPAERARKMAIKEQWNLRRRKKYAQFLLGTITRKVVKQTVMTS 791
Query: 634 VYGVTYIGARDQIKKRLEE----KGLITDDRL---LFTAACYAAKVTLAALGEVFEAARG 686
VYGVTYIGAR QI RLEE KG++ D L ++ A+CYAA+VT+ ++G++F +AR
Sbjct: 792 VYGVTYIGARKQISARLEEVFLTKGMMMDSELEDQIYHASCYAAEVTMESMGDLFTSARN 851
Query: 687 IMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPY 719
IM+WLGDCA +A QA+ W TPLGLPVVQPY
Sbjct: 852 IMTWLGDCASKVASNGQAMSWITPLGLPVVQPY 884
>F8P940_SERL9 (tr|F8P940) DNA-directed RNA polymerase OS=Serpula lacrymans var.
lacrymans (strain S7.9) GN=SERLADRAFT_363576 PE=3 SV=1
Length = 1134
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 248/715 (34%), Positives = 387/715 (54%), Gaps = 87/715 (12%)
Query: 65 LKEAVEAEQKAHQAR--------SKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEE 116
++E + AE+KA + S+ + ++ P + + +K+++I + ++M L N
Sbjct: 223 IQEIIVAEEKAGCSTGAEYCVIDSRGKGTNLGPFLQLVKPSKLSLITILEIMRL---NGS 279
Query: 117 GCV----QLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFV 172
G V + +A + +G A+E E + N ++ S+ + + F
Sbjct: 280 GGVSDGMKTARALLTVGRAVENEYKAQMCKRNNIAIPSQS------------RPGEYGFF 327
Query: 173 NGLIKR----KKLKEVHVVLKQEE-VSPWSRAAQAKLGSRLIELLIETAYVHSPV--NQS 225
G R +++ + EE + W++ + ++GS L++ L++ A V ++
Sbjct: 328 TGFGYRDLHARRVTAAKYTMDSEEWTTEWTQLLRVRVGSILVDCLMDVATVTRTAIDKRT 387
Query: 226 ADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK--CAKHXXXXXXXXX 283
+T + +PAF H ++ GQK+ GVI+ +P+V + K +
Sbjct: 388 QETISEDQPAFYHAYE---YVRGQKL----GVIRLNPVVADRIAKDGLRETLHPRHLPML 440
Query: 284 XXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKG-EQMQKVFEALDILGNTKRRI 342
K W YD+GG+L+ S MR S++QQ +++ ++ V+ LD+LG+T +I
Sbjct: 441 VKPKPWLNYDQGGYLYNKSSAMRFKDSQEQQSYLQHASELGNVELVYAGLDVLGSTPWKI 500
Query: 343 NGRLLDVVESIWAGGGNVAGLV-DCENVPLPDKPP--TEDLKQIQEWKYRVRKAKKMNLE 399
N + DVV ++W G + L + P P+KP + D+K + R++ +
Sbjct: 501 NRNVFDVVLTVWNSGERLCKLPPSVFDQPEPEKPDNLSMDIKAKSVYGQRLKAYMQAKAN 560
Query: 400 RHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEG 459
HS RC K+ +AR D Y PHNLDFRGRAYP+ PHLNH+G DL RGLL F E
Sbjct: 561 NHSDRCSVNYKIEIARAFLG-DTMYLPHNLDFRGRAYPIPPHLNHIGDDLSRGLLMFGEA 619
Query: 460 RPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAE 519
+PLG+ GLRWLKIHLANLY G +K ++D R+ +V + +++DSA+ P+ G RWW +A+
Sbjct: 620 KPLGERGLRWLKIHLANLY--GFDKANFDERVEYVMERLDEVYDSAEKPLEGRRWWTKAD 677
Query: 520 DPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAK 579
DP+QCLA C+ L AL S P + +S LP+HQDG+CNGLQHYAALG D A VNL
Sbjct: 678 DPWQCLATCMELRAALESEDPEAYMSSLPVHQDGTCNGLQHYAALGGDNRGAQQVNLSVT 737
Query: 580 EKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTY 639
E+P+DVY+ +A V + D+ D AK+L ++ RK+VKQTVMT+VYGVTY
Sbjct: 738 ERPSDVYTYVANMVQRQLDEDAANDHK------YAKMLQGKVARKVVKQTVMTTVYGVTY 791
Query: 640 IGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIA 699
IGARDQI+++L+++ I ++ + AA Y AK TL +G++F A+ I +WL CA+++A
Sbjct: 792 IGARDQIERQLKDRKDIPEEE-CWNAAAYLAKKTLFCIGDLFSGAKAIQTWLNLCARLVA 850
Query: 700 Y------------------------------ENQAVHWTTPLGLPVVQPYCKTER 724
+ +V WTTPLGLP+VQPY K +R
Sbjct: 851 KSIPAERIPEALEAEKTKRRLPVSTNRIRKEQMTSVVWTTPLGLPIVQPYRKVKR 905
>I4Y5J6_WALSC (tr|I4Y5J6) DNA-directed RNA polymerase OS=Wallemia sebi (strain
ATCC MYA-4683 / CBS 633.66) GN=WALSEDRAFT_49331 PE=3
SV=1
Length = 1136
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/582 (40%), Positives = 329/582 (56%), Gaps = 67/582 (11%)
Query: 196 WSRAAQAKLGSRLIELLIETAYVHSPVN--QSADTPPDIRPAFRHGFKPQSRSPGQKILK 253
WS+ + K+GS L++ L+E A + +S + + +PAF ++ G+K+
Sbjct: 361 WSQIIRIKVGSFLVDSLMECATITRTAKHPESGEEMTEAQPAFSQSYQ---YVRGKKL-- 415
Query: 254 NYGVIQCDPLVLAGLEK--CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSR 311
GVI+ + V L+K K W YD GG+LF + MR S
Sbjct: 416 --GVIKVNTAVADRLDKDPLGSTIHPRHLPMLVKPKPWLRYDSGGYLFHKNSAMRFKDSN 473
Query: 312 KQQDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCEN-V 369
+QQ + E M+ V LD+LG T IN ++ +VV+ W G +A +
Sbjct: 474 EQQSYILKASSEGTMEPVLAGLDVLGATPWNINRKVFNVVKEAWNTGEGLAKIPPATTKT 533
Query: 370 PLPDKP------PTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCF 423
P P KP P E +Q K V + + HS RCDT KL +AR +E F
Sbjct: 534 PDPVKPANYAIDPKERSNYLQSMKAVVNERRN----NHSIRCDTNYKLEIARAFLNE-TF 588
Query: 424 YYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIE 483
Y+PH LDFRGRAYP+ PHLNH+G DL RGLL FAE RPLG+ G+RWLKIHLAN+Y G +
Sbjct: 589 YFPHTLDFRGRAYPIPPHLNHIGDDLSRGLLIFAEKRPLGEKGMRWLKIHLANVY--GYD 646
Query: 484 KLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSV 543
K S++ R F + H+ +I+DSADNP+NG +WWL+A+DP+QCLAAC + A+ S +P +
Sbjct: 647 KASFNEREQFADEHMEEIYDSADNPLNGRKWWLKADDPWQCLAACYEIQAAMLSPNPLAY 706
Query: 544 ISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNK 603
S LP+HQDG+CNGLQHYAALG D + A VNL ++P+DVY+ +A V + +++D+ +
Sbjct: 707 ESALPVHQDGTCNGLQHYAALGGDPMGAKQVNLEQGDRPSDVYTAVADLVIEDIKKDALE 766
Query: 604 DPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLF 663
+ F AK+L +I RK+VKQTVMT+VYGVT+IGARDQI K+L+++G I D+ ++
Sbjct: 767 SDNEF-----AKILEGKITRKVVKQTVMTTVYGVTFIGARDQIDKQLQDRGDIPQDK-VY 820
Query: 664 TAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAY----------------------- 700
T A Y AK L ++G++F A I WL A+ IA
Sbjct: 821 TTASYLAKKVLRSIGDLFAGANAIQKWLSMSARYIAKSIPPERLIRALEPLEAKRKNSPA 880
Query: 701 ------------ENQAVHWTTPLGLPVVQPYCKTERHLVSLL 730
+ +V WTTPLGLP+VQPY K ++ V+ L
Sbjct: 881 NKGNVSTRTAKEQMTSVIWTTPLGLPIVQPYRKAKKKQVATL 922
>E1ZQB5_CHLVA (tr|E1ZQB5) DNA-directed RNA polymerase OS=Chlorella variabilis
GN=CHLNCDRAFT_27382 PE=3 SV=1
Length = 599
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/460 (45%), Positives = 289/460 (62%), Gaps = 19/460 (4%)
Query: 289 WKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNV-------KGEQMQKVFEALDILGNTKRR 341
W + GGHL L + +MR GSR QQ+++ +G + +V++AL+ LG+T
Sbjct: 19 WLRNNLGGHLTLRNTVMRIRGSRLQQEMLDAADQEWGEGRGPGLSRVYDALNSLGSTAWA 78
Query: 342 INGRLLDVVESIWAGGGNVAGLVDCENVPLPD--KPPTEDLKQIQ---EWKYRVRKA--- 393
IN + VVE++WA GG V + N+PLP KP + ++ R R+A
Sbjct: 79 INQDVFRVVETVWAWGGGVCDIPPKVNLPLPRDLKPGFRQHRHAPGQLQFYLRTRRADIS 138
Query: 394 --KKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCR 451
+K N E HS RCD E KL++AR+ E FY+PHN+DFRGRAYPMHPHLNHLG+DL R
Sbjct: 139 RMQKKNRELHSLRCDMEYKLAIAREFVKEPRFYFPHNVDFRGRAYPMHPHLNHLGADLSR 198
Query: 452 GLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNG 511
GLL+FAEGRPLG+ GL WL + ANL+ G++KL GR+ +VE+H+ I +
Sbjct: 199 GLLQFAEGRPLGEHGLFWLYVQAANLWGQGVDKLPLWGRVKWVEDHLAQILMTTRGSHGQ 258
Query: 512 NRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEA 571
+W +AE+PFQ L+ C + +A S P +SH+P+HQDGSCNGLQHYAALGRD
Sbjct: 259 VAYWWQAENPFQFLSTCFEIHKANASGDPARFVSHVPVHQDGSCNGLQHYAALGRDFSGG 318
Query: 572 AAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVM 631
AVNL ++P R D ++ PS P+ L+ L +DRKLVKQTVM
Sbjct: 319 HAVNLCPTDRPQAGGGARKPRTPDRACIHASNQPSNQPDLLMCHTLCAGLDRKLVKQTVM 378
Query: 632 TSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWL 691
TSVYGVT++GAR Q+ RL+E+G D++ ++ +CY AKVTL L E+F++A+ M WL
Sbjct: 379 TSVYGVTFVGARAQVGNRLKERGF-EDNQFMYKVSCYTAKVTLECLHEMFQSAKHTMHWL 437
Query: 692 GDCAKVIAYENQAVHWTTPLGLPVVQPYCKTER-HLVSLL 730
+CA++IA E +V W TPLGLPVVQPY + +R H+ +LL
Sbjct: 438 SECARLIAKEGHSVMWHTPLGLPVVQPYRRKDRQHVRTLL 477
>L8X0B4_9HOMO (tr|L8X0B4) DNA-directed RNA polymerase OS=Rhizoctonia solani AG-1 IA
GN=AG1IA_03910 PE=3 SV=1
Length = 1371
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 260/731 (35%), Positives = 400/731 (54%), Gaps = 84/731 (11%)
Query: 52 PRVKSLLLGWFEPLKEAVEAEQKAHQARSKKQQAS----IAPNVDSLPAAKVAVIVMHKM 107
P ++ + W + + +E + KA + K + S ++P + L +K+A+I + ++
Sbjct: 399 PTLQQWMYQWLQATETRLEDDIKALTNKEKTTKPSAKSPLSPFLRLLDTSKLAMITILEL 458
Query: 108 MSLVMEN--EEGCVQLVQAAVQIGMALEQE----------VRIHKFLEGNKSLQSKK--- 152
M L EG ++ +A + +G A+E E V++ + +S++++K
Sbjct: 459 MRLHGTGGVSEG-MKTSRALIAVGRAVETECLAVWSKKRGVKLGDVVSAPRSMKTRKGKP 517
Query: 153 ---------TEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSP-WSRAAQA 202
+ + E + ++ E +V E P W++ +
Sbjct: 518 PKAKPEVIEIIEEERTGTSRASENPEQLAEAVVD----TESPIVANMESSMPEWTQVVRV 573
Query: 203 KLGSRLIELLIETAYV-HSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCD 261
++GS L++ ++ +AY+ + N+S + + +PAF H ++ G+K+ GVI+ +
Sbjct: 574 RVGSFLVDSVMNSAYIKRNGTNESGENLCEEQPAFMHSYE---YVRGKKL----GVIKLN 626
Query: 262 PLVLAGLEKCAKHXXXXXX-----XXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDV 316
P+V EK A+ + W+ YDKGG+L LP+ +MR S +Q
Sbjct: 627 PVVG---EKMARDPIRETLHPRHLPMLVKPQPWEDYDKGGYLKLPT-VMRIKDSPEQLSY 682
Query: 317 MKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDK 374
+K+ + V+E LD LG T RIN ++L+VV +W G +AG+ + ++ P K
Sbjct: 683 LKHASAAGHVDFVYECLDALGETPWRINDKILNVVLQVWNEGKGMAGIPPIQLDIEEPPK 742
Query: 375 PPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGR 434
P +D + + +++ H +RC+ KL VAR + DE FY PHNLDFRGR
Sbjct: 743 PEEDDPRARATYLLKLKSILTDKRNNHGERCNVNYKLEVARFVNDE--FYMPHNLDFRGR 800
Query: 435 AYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFV 494
AYP+ PHLNH+G DLCRGLL FAE RPLG+ GLRWLKIHLAN++ G +K S+D R+ FV
Sbjct: 801 AYPIPPHLNHIGDDLCRGLLLFAERRPLGERGLRWLKIHLANVF--GYDKASFDERVLFV 858
Query: 495 ENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGS 554
E H+ +I DSA+NP+NG +WWL+A+DP+QCL+ C+ L+EAL+ P S+LP+HQDG+
Sbjct: 859 EKHLEEIRDSAENPLNGKQWWLKADDPWQCLSTCMELTEALKGPVPELYRSNLPVHQDGT 918
Query: 555 CNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLA 614
CNGLQHYAALG D A VNL ++PADVYS +A V ++ D+ P A
Sbjct: 919 CNGLQHYAALGGDAAGAQHVNLEQGDRPADVYSHVARMVDVVVDEDAALG---IPE---A 972
Query: 615 KVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTL 674
KV+ +I RK+VKQTVMT+VYGVT+IGARDQI+K+L + ++ + AA A L
Sbjct: 973 KVVQGKIARKVVKQTVMTTVYGVTFIGARDQIEKQLRDIVGLSREESWPVAAYLAKTQVL 1032
Query: 675 AALGEVFEAARGIMSWLGDCAKVIAYE---------------------NQAVHWTTPLGL 713
A+G++F A I +WL A++IA +V WTT LGL
Sbjct: 1033 GAIGDLFSGASQIQNWLSISARLIAKSIPSDRMPTVLSATPREAARERMTSVIWTTALGL 1092
Query: 714 PVVQPYCKTER 724
P+VQPY K ++
Sbjct: 1093 PIVQPYRKAKK 1103
>A7ETG7_SCLS1 (tr|A7ETG7) DNA-directed RNA polymerase OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_08623 PE=3 SV=1
Length = 1392
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 258/715 (36%), Positives = 366/715 (51%), Gaps = 68/715 (9%)
Query: 63 EPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKV-AVIVMHKMMSLVMENEEGCVQL 121
E LK EAE K H++ + + P + LPA K+ A+ ++ M +L + + L
Sbjct: 414 EELKAIDEAEAKQHRSAADISRCEYGPFLRYLPAEKLSALTIISHMHALSSSGIDKGLTL 473
Query: 122 VQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRK-- 179
A +QI ++E E + + + AD L K + R I
Sbjct: 474 SFAILQIAKSVEDESIFESIQQNKAKPLFRDSPADRARMLRILKSRARGASGESIDENHS 533
Query: 180 -KLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN----QSADTPPDIRP 234
VL Q WS +AK+GS L+E L++ A V PV ++ +T ++P
Sbjct: 534 TNHSSEEFVLSQIRSREWSIGIRAKVGSFLLESLLKVAKV--PVTLKHPETNETVTQMQP 591
Query: 235 AFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKK-WKGYD 293
AF HG Q G+K+ GVI + +++ L++ H + W G+
Sbjct: 592 AFSHG---QQYRLGKKL----GVINANKVIVELLKREPVHSLLAKHLPMLVKPEPWTGFS 644
Query: 294 KGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQ--MQKVFEALDILGNTKRRINGRLLDVVE 351
GG L P +MR + Q + +Q + VF L+ILG +IN + DV+
Sbjct: 645 SGGFLRHPGKVMRVKNGDQDQRNYADAAIDQGNLTTVFRGLNILGEQSWKINQPVFDVML 704
Query: 352 SIWAGGGNVAGLV-DCENVPLPDKPPTE-DLKQIQEWKYRVRKAKKMNLERHSQRCDTEL 409
W G +A L D + P +P T D + + W V+K + HSQRC
Sbjct: 705 DAWNSGDAIANLAPDKPRLEYPPEPETSSDPLERRRWVTAVKKVENAKAGFHSQRCFQNF 764
Query: 410 KLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRW 469
+L +AR ++D+ FY+PHN+DFRGRAYP+ P+LNH+G+D CRGL+ F G+ LG SGL+W
Sbjct: 765 QLEIARALRDK-TFYFPHNVDFRGRAYPIPPYLNHMGADHCRGLMIFGVGKKLGTSGLKW 823
Query: 470 LKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACI 529
LK+HLAN+Y G +K S R F HI +I+DSA NP+ G+RWWL+AEDP+QCLAAC+
Sbjct: 824 LKVHLANVY--GFDKASLSEREEFASKHIDEIYDSATNPLGGDRWWLQAEDPWQCLAACM 881
Query: 530 NLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEI 589
L AL S P S +S+LP+HQDG+CNGLQHYAALG D A VNL ++PADVY+ +
Sbjct: 882 ELKNALESGDPASFVSYLPVHQDGTCNGLQHYAALGGDVWGAQQVNLEPGDRPADVYTAV 941
Query: 590 AVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKR 649
A V + +++D + S AK+L +I RK+VKQTVMT+VYGVT+IGA+ Q++K+
Sbjct: 942 ADLVKESIKKDLLEGHSK------AKILDGKITRKVVKQTVMTNVYGVTFIGAKAQVRKQ 995
Query: 650 L--EEKGLITD-DRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYE----- 701
L + L D + T A Y AL +F A I WLGDCA ++
Sbjct: 996 LVAAHRDLPDDTEDNPGTLASYVVTKIFTALSTMFRGAHDIQYWLGDCASRVSSSLTPEQ 1055
Query: 702 -----------------------------NQAVHWTTPLGLPVVQPYCKTERHLV 727
+V WTTPL LPVVQPY + LV
Sbjct: 1056 VNRIVEHASKQSARPSKGDASKLEEMSQFKSSVIWTTPLNLPVVQPYRTNKSRLV 1110
>Q0QFS6_VERVE (tr|Q0QFS6) DNA-directed RNA polymerase OS=Vermamoeba vermiformis
GN=mtRNAP PE=3 SV=1
Length = 992
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 253/702 (36%), Positives = 379/702 (53%), Gaps = 61/702 (8%)
Query: 57 LLLGWFEPLKEAVEAEQK-------AHQA-RSKKQQASIAPN----------VDSLPAAK 98
LL WF+PL + ++ E++ HQ R+ + + N + + + K
Sbjct: 188 FLLQWFQPLVKLLDLEKQLSLADPGVHQELRASVEALGVLYNEQYLHEYHAHTNEVASDK 247
Query: 99 VAVIVMHKMMSLV--MENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEAD 156
+AVIV+H+++ ++ + +VQ QI A++ EV + ++ + D
Sbjct: 248 LAVIVIHELIGAAAGLKEQSPVRSVVQ---QISEAVQGEVNWQDLKDELENPAESRATPD 304
Query: 157 TEENLNND--KEKQRKFVN----GLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIE 210
+ EN + +K+++ VN + R+ LK VL E + WSR + +G+RL+
Sbjct: 305 SAENPSGTVPAKKKKRVVNFTSVNRLNRRALK----VLGSEAL--WSRGLKEFMGARLLA 358
Query: 211 LLIETAYV--HSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYG--VIQCDPLVLA 266
LL+ A + PV RPAF + Q R G N + V A
Sbjct: 359 LLLSVAQLREEDPVTGIFHA----RPAFEVSHRTQHRKEGMDSTHNPSRLSVSASEAVRA 414
Query: 267 GLEKCAKHXXXXXXXXXXXX--KKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQ 324
+ H + W D+GG+L + I R +Q + K +
Sbjct: 415 RFDAMMTHFFHFIRQYPMQIPPRPWDSPDRGGYLAVQVPIFRYQSYEEQFRPLFR-KSDD 473
Query: 325 MQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQ 384
+ ++E L+ LG T RI R+ VV+ W GG++A + D + P P PT L +
Sbjct: 474 LAVIYEGLNALGETPWRIYQRVYHVVKRAWEQGGDLADIPDRRDKPYP--MPTA-LGKDS 530
Query: 385 EWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNH 444
W +++K ++N + S R D LK+ VA K D+ Y+PHN+DFRGR YP+ PHLNH
Sbjct: 531 RWYRQLKKIDQLNYDLVSLRADFLLKMEVAEKFMDK-TLYFPHNMDFRGRVYPVPPHLNH 589
Query: 445 LGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDS 504
+GSD+ RGLL FA+G+PLG+ GL WL+I LANLY G +K+ + RL FV + I+
Sbjct: 590 MGSDMSRGLLWFADGKPLGERGLHWLRIQLANLY--GFDKVPFSDRLDFVSKNQDKIYSC 647
Query: 505 ADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAAL 564
A P+ +RWW+ A+ P+Q LAAC A+ S+ P+S +SHLPI QDG+CNGLQHYAAL
Sbjct: 648 AQRPLE-DRWWVAADSPWQFLAACFEYYNAMHSADPHSYVSHLPIQQDGTCNGLQHYAAL 706
Query: 565 GRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRK 624
G DE A +VNL+ ++P DVYS++A V + RD+ +A++ ++DRK
Sbjct: 707 GGDEQGAKSVNLLPSDRPQDVYSDVAELVAQRIHRDAEN------GVAVAQLSKGRVDRK 760
Query: 625 LVKQTVMTSVYGVTYIGARDQIKKRLEEKGLIT--DDRLLFTAACYAAKVTLAALGEVFE 682
+VKQTVMTSVYGVT+IGAR QI +++ L+T D ++ A+ Y A++T +L E+F
Sbjct: 761 VVKQTVMTSVYGVTFIGARQQITNAMKDHRLLTHLTDNEMYQASQYIAQLTFESLKEMFT 820
Query: 683 AARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTER 724
AR IM WL CAK++A + + V WTTPLGLPVVQPY + R
Sbjct: 821 GARNIMDWLATCAKLVAKKGRLVSWTTPLGLPVVQPYRRQSR 862
>D2KCB6_9TREE (tr|D2KCB6) DNA-directed RNA polymerase OS=Kwoniella heveanensis
GN=RPO41 PE=3 SV=1
Length = 1256
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 258/709 (36%), Positives = 379/709 (53%), Gaps = 85/709 (11%)
Query: 76 HQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC---VQLVQAAVQIGMAL 132
+ A SK +++ + + LP K+A+I + ++M M G ++ ++ + +G A+
Sbjct: 307 YSASSKMKRSVLVMYLQLLPVEKLALITILEVMR--MSGSGGISDGMKALRGMLAVGKAV 364
Query: 133 EQEVRIH--KFLEGNKSLQSKKT-EADTEENLNNDKEKQRKFVNGLIKRKKLKEV----- 184
E E R K + G S +T + T++ + + +K KL+E
Sbjct: 365 ETEFRAETIKNIAGVDSHHWLRTIDPQTQKPSRQLVGSVWRRIGEQVKTSKLEETSDSLS 424
Query: 185 ---HVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDI---RPAFRH 238
H L Q PWS+ AQ +GS L++ L++ A V V ++ +T ++ +PAF H
Sbjct: 425 TATHDDLHQVWTPPWSQMAQLGVGSELVDALLKVAKVER-VGRNPETGEEVVEEQPAFTH 483
Query: 239 GFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCA-------KHXXXXXXXXXXXXKKWKG 291
++ G+K+ GVI+ +P+V A L + + KH K W
Sbjct: 484 AYE---YIRGKKL----GVIKHNPVVAARLARDSVGVVIHPKHLPMLVEP-----KPWTS 531
Query: 292 YDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVV 350
++ GG+L IMR S +QQ +K + ++ VF LD+L +T IN ++ DV+
Sbjct: 532 HNNGGYLLHSVPIMRYKESAEQQSYLKTASEQGHLEPVFHGLDVLSSTAWSINRKVFDVI 591
Query: 351 ESIWAGGGNVAGLVDCE---NVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLER--HSQRC 405
++W G +A + E +P+KP D + Y R M +R H++RC
Sbjct: 592 LNVWNSGEAIADIPASEEKSTYDVPEKPDPRDQDPQKRSLYIERMKSVMAAQRKDHAERC 651
Query: 406 DTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKS 465
L +AR + D FY PHN+DFRGRAYP+ PHL+ +G DLCRGLL F + LG++
Sbjct: 652 KFNYNLEIARSYLN-DVFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGNKKALGET 710
Query: 466 GLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCL 525
GL+WL IHLAN+Y G +K S++ R F + H DIFDSADNP++G RWWL+AEDP+QCL
Sbjct: 711 GLKWLHIHLANVY--GFDKASFEERARFAQEHEADIFDSADNPLDGKRWWLQAEDPWQCL 768
Query: 526 AACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADV 585
A C ++ ALRSS P S LPIHQDG+CNG+QHYAALG D A AVNL ++PAD+
Sbjct: 769 ATCFEIAAALRSSDPTQYESSLPIHQDGTCNGMQHYAALGGDVRGAKAVNLEHGDRPADI 828
Query: 586 YSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQ 645
Y+ + V+ ++ D K ALL K + RK+VKQTVMT+VYGVT++GAR+Q
Sbjct: 829 YTGVVNIVNKVIEEDQKKG---LDVALLIK---KPLGRKVVKQTVMTTVYGVTFVGAREQ 882
Query: 646 IKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI------- 698
I K+L +G + +F + Y AK L +G++F A+ IM WL AK+I
Sbjct: 883 IAKQLTARGDFAQEH-VFLVSGYIAKTVLNCIGDLFSGAKAIMDWLTTSAKLISRSVPPE 941
Query: 699 ----AYEN-------------------QAVHWTTPLGLPVVQPYCKTER 724
A N +V WTTPLGLPVVQPY K ++
Sbjct: 942 RVEEAANNLTTTLRNGKVKSRAAREFMTSVVWTTPLGLPVVQPYRKAQK 990
>Q6TGI7_CRYGA (tr|Q6TGI7) DNA-directed RNA polymerase OS=Cryptococcus gattii PE=3
SV=1
Length = 1180
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 248/692 (35%), Positives = 367/692 (53%), Gaps = 85/692 (12%)
Query: 94 LPAAKVAVIVMHKMMSLVMENEEGC---VQLVQAAVQIGMALEQEVRIH----------- 139
LP K+A+I + ++M M G +++++ V +G A+E E R
Sbjct: 292 LPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETEFRAETIKNVAGVDSY 349
Query: 140 ---KFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPW 196
K ++ S++ + + + ++ G +R L H ++ W
Sbjct: 350 HWLKTIDPQTQKPSRQLIGSVWKKIGEQANQAKRLGKGEAERI-LPPNHDDMQDIWTPAW 408
Query: 197 SRAAQAKLGSRLIELLIETAYVHSPVN--QSADTPPDIRPAFRHGFKPQSRSPGQKILKN 254
SR Q +GS L++ L++ A V + + +++PAF H ++ G+K+
Sbjct: 409 SRMIQLGVGSELVDALLKVAKVERTARDRNTGEIVMELQPAFTHAYE---YVRGKKL--- 462
Query: 255 YGVIQCDPLVLAGLEK--CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRK 312
GVI+ +P+V A L K + W ++KGG+L +MR S +
Sbjct: 463 -GVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKESLE 521
Query: 313 QQDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCEN--- 368
QQ +K E ++ VF LD+L +T RIN R+ DVV W G +A + E+
Sbjct: 522 QQKWLKAASEEGHLEPVFHGLDVLSSTPWRINRRVFDVVLESWNKGEPIADIPPSEDKAH 581
Query: 369 VPLPDKPPTEDLKQIQEWKYRVRKAKKMNL------ERHSQRCDTELKLSVARKMKDEDC 422
P+KP + D Q+ + RV+ +K + H++RC + +AR +D
Sbjct: 582 YEFPEKPDSSD----QDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYL-KDT 636
Query: 423 FYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGI 482
FY PHN+DFRGRAYP+ PHL+ +G DLCRGLL F +PLG++GL+WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY--GY 694
Query: 483 EKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNS 542
+K S+ R F + H DIFDSAD+P++G RWWL+AEDP+QCLA C L+ ALRS SP++
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPSPSA 754
Query: 543 VISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSN 602
S LP+HQDG+CNG+QHYAALG D A AVNL A ++PAD+Y+ + V+ ++ D
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTGVVDIVNKVVEEDKK 814
Query: 603 KDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLL 662
ALL K + + RK+VKQTVMT+VYGVT++GARDQI K+L +G I + +
Sbjct: 815 AGHDI---ALLIK---EPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQEH-I 867
Query: 663 FTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYE--------------------- 701
F + Y AK L +G++F A+ IM WL A++I+
Sbjct: 868 FAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRIQEAATNLTSTSRTGK 927
Query: 702 ---------NQAVHWTTPLGLPVVQPYCKTER 724
AV WTTPLGLPVVQPY K +
Sbjct: 928 VTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHK 959
>Q5Y265_CRYGA (tr|Q5Y265) DNA-directed RNA polymerase OS=Cryptococcus gattii
GN=RPO41 PE=3 SV=1
Length = 1180
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 248/692 (35%), Positives = 367/692 (53%), Gaps = 85/692 (12%)
Query: 94 LPAAKVAVIVMHKMMSLVMENEEGC---VQLVQAAVQIGMALEQEVRIH----------- 139
LP K+A+I + ++M M G +++++ V +G A+E E R
Sbjct: 292 LPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETEFRAETIKNVAGVDSY 349
Query: 140 ---KFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPW 196
K ++ S++ + + + ++ G +R L H ++ W
Sbjct: 350 HWLKTIDPQTQKPSRQLIGSVWKKIGEQANQAKRLGKGEAERI-LPPNHDDMQDIWTPAW 408
Query: 197 SRAAQAKLGSRLIELLIETAYVHSPVN--QSADTPPDIRPAFRHGFKPQSRSPGQKILKN 254
SR Q +GS L++ L++ A V + + +++PAF H ++ G+K+
Sbjct: 409 SRMIQLGVGSELVDALLKVAKVERTARDRNTGEIVMELQPAFTHAYE---YVRGKKL--- 462
Query: 255 YGVIQCDPLVLAGLEK--CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRK 312
GVI+ +P+V A L K + W ++KGG+L +MR S +
Sbjct: 463 -GVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKESLE 521
Query: 313 QQDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCEN--- 368
QQ +K E ++ VF LD+L +T RIN R+ DVV W G +A + E+
Sbjct: 522 QQKWLKAASEEGHLEPVFHGLDVLSSTPWRINRRVFDVVLESWNKGEPIADIPPSEDKAH 581
Query: 369 VPLPDKPPTEDLKQIQEWKYRVRKAKKMNL------ERHSQRCDTELKLSVARKMKDEDC 422
P+KP + D Q+ + RV+ +K + H++RC + +AR +D
Sbjct: 582 YEFPEKPDSSD----QDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYL-KDT 636
Query: 423 FYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGI 482
FY PHN+DFRGRAYP+ PHL+ +G DLCRGLL F +PLG++GL+WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY--GY 694
Query: 483 EKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNS 542
+K S+ R F + H DIFDSAD+P++G RWWL+AEDP+QCLAAC L+ ALRS P++
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLAACFELAAALRSPDPSA 754
Query: 543 VISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSN 602
S LP+HQDG+CNG+QHYAALG D A AVNL A ++PAD+Y+ + V+ ++ D
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTGVVDIVNKVVEEDKK 814
Query: 603 KDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLL 662
ALL K + + RK+VKQTVMT+VYGVT++GARDQI K+L +G I + +
Sbjct: 815 AGHDI---ALLIK---EPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQEH-I 867
Query: 663 FTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYE--------------------- 701
F + Y AK L +G++F A+ IM WL A++I+
Sbjct: 868 FAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRIQEAATNLTSTSRTGK 927
Query: 702 ---------NQAVHWTTPLGLPVVQPYCKTER 724
AV WTTPLGLPVVQPY K +
Sbjct: 928 VTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHK 959
>F6KJN3_CRYGA (tr|F6KJN3) DNA-directed RNA polymerase OS=Cryptococcus gattii PE=3
SV=1
Length = 1180
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 247/692 (35%), Positives = 367/692 (53%), Gaps = 85/692 (12%)
Query: 94 LPAAKVAVIVMHKMMSLVMENEEGC---VQLVQAAVQIGMALEQEVRIH----------- 139
LP K+A+I + ++M M G +++++ V +G A+E E R
Sbjct: 292 LPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETEFRAETIKNVAGVDSY 349
Query: 140 ---KFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPW 196
K ++ S++ + + + ++ G +R L H ++ W
Sbjct: 350 HWLKTIDPQTQKPSRQLIGSVWKKIGEQANQAKRLGKGEAERI-LPPNHDDMQDIWTPAW 408
Query: 197 SRAAQAKLGSRLIELLIETAYVHSPVN--QSADTPPDIRPAFRHGFKPQSRSPGQKILKN 254
SR Q +GS L++ L++ A V + + +++PAF H ++ G+K+
Sbjct: 409 SRMIQLGVGSELVDALLKVAKVERTARDRNTGEIVMELQPAFTHAYE---YVRGKKL--- 462
Query: 255 YGVIQCDPLVLAGLEK--CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRK 312
GVI+ +P+V A L K + W ++KGG+L +MR S +
Sbjct: 463 -GVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKESLE 521
Query: 313 QQDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCEN--- 368
QQ +K E ++ VF LD+L +T RIN R+ DVV W G +A + E+
Sbjct: 522 QQKWLKAASEEGHLEPVFHGLDVLSSTPWRINRRVFDVVLESWNKGEPIADIPPSEDKAH 581
Query: 369 VPLPDKPPTEDLKQIQEWKYRVRKAKKMNL------ERHSQRCDTELKLSVARKMKDEDC 422
P+KP + D Q+ + RV+ +K + H++RC + +AR +D
Sbjct: 582 YEFPEKPDSSD----QDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYL-KDT 636
Query: 423 FYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGI 482
FY PHN+DFRGRAYP+ PHL+ +G DLCRGLL F +PLG++GL+WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY--GY 694
Query: 483 EKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNS 542
+K S+ R F + H DIFDSAD+P++G RWWL+AEDP+QCLA C L+ ALRS +P++
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPNPSA 754
Query: 543 VISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSN 602
S LP+HQDG+CNG+QHYAALG D A AVNL A ++PAD+Y+ + V+ ++ D
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTGVVDIVNKVVEEDKK 814
Query: 603 KDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLL 662
ALL K + + RK+VKQTVMT+VYGVT++GARDQI K+L +G I + +
Sbjct: 815 AGHDI---ALLIK---EPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQEH-I 867
Query: 663 FTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYE--------------------- 701
F + Y AK L +G++F A+ IM WL A++I+
Sbjct: 868 FAVSSYIAKTVLNCIGDLFSGAKAIMDWLSTSARLISRSIPPTRIQEAATNLTSTSRTGK 927
Query: 702 ---------NQAVHWTTPLGLPVVQPYCKTER 724
AV WTTPLGLPVVQPY K +
Sbjct: 928 VTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHK 959
>Q0QFR1_ACACA (tr|Q0QFR1) DNA-directed RNA polymerase (Fragment) OS=Acanthamoeba
castellanii PE=2 SV=1
Length = 512
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/380 (51%), Positives = 263/380 (69%), Gaps = 12/380 (3%)
Query: 342 INGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPT--EDLKQIQEWKYRVRKAKKMNLE 399
IN R+ +V+ W GG +A L N+P + P DL+ Q++ +KAK N
Sbjct: 6 INNRMHEVICEAWDNGGGIADLPSRTNLPELEPPADYYSDLEVKQKFDRERKKAKIANYN 65
Query: 400 RHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEG 459
HS RCD KL VA++ +D FYYPHN+DFRGR YP+ PHLNHLG DLCRGLL FAEG
Sbjct: 66 LHSLRCDVTYKLQVAKECQDR-TFYYPHNMDFRGRTYPIPPHLNHLGQDLCRGLLTFAEG 124
Query: 460 RPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAE 519
+PLG+SGLRWLK+HLAN++ G +K++++ R+ FVEN++ I DSA NP+ G RWWL+A+
Sbjct: 125 KPLGESGLRWLKVHLANVF--GNDKITFEDRVRFVENNMEHIMDSASNPLGGQRWWLKAD 182
Query: 520 DPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAK 579
P+QCLAA I L A S P + +S LPIHQDGSCNGLQHYAALG DE+ A VNL+
Sbjct: 183 KPWQCLAASIELINAYNSGQPETYVSTLPIHQDGSCNGLQHYAALGGDEMGARQVNLLPS 242
Query: 580 EKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTY 639
E+P DVYS + V ++RR + + +A+ L+ ++DRK++KQTVMTSVYGVT+
Sbjct: 243 ERPQDVYSGV---VELVVRRLEDDAAN---GVEIAQRLLGKVDRKVIKQTVMTSVYGVTF 296
Query: 640 IGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIA 699
IGAR QI+ L++KG ++DD +F A+ Y A T +++ E+F AR IM+WL DCA +IA
Sbjct: 297 IGARQQIENALKDKGKVSDDD-MFLASRYLATSTFSSIKEMFSGAREIMTWLSDCATLIA 355
Query: 700 YENQAVHWTTPLGLPVVQPY 719
+ + V W TP+GLPVVQPY
Sbjct: 356 KQGKPVTWVTPMGLPVVQPY 375
>I0YZI0_9CHLO (tr|I0YZI0) DNA-directed RNA polymerase OS=Coccomyxa subellipsoidea
C-169 GN=COCSUDRAFT_29021 PE=3 SV=1
Length = 591
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/470 (45%), Positives = 284/470 (60%), Gaps = 45/470 (9%)
Query: 289 WKGYDKGGHLFLPSYIMRTH----GSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRING 344
W+ +D GGHL + IMR H G + + + + +V++AL+ +G IN
Sbjct: 8 WRSHDSGGHLIMRGSIMRVHTYPKGVSRAIETAQERTPYGLSRVYDALNAVGEVPWAINK 67
Query: 345 RLLDVVESIWAGGGNVAGL----VDCENVPLPDKP-PTEDLKQIQEWKYR---------- 389
+L VVE WA + GL VD KP P K+ + +R
Sbjct: 68 PMLAVVERAWAAQLPICGLPVKYVD-------QKPQPKSTAKRFRTHHHRHQLQLLLTSQ 120
Query: 390 ---VRKAKKMNLER---------HSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYP 437
+ K+M R HS RCD LKL VA + KDE FY+PHNLDFRGRAYP
Sbjct: 121 ETGAERTKRMKGNRLLNKRIRETHSLRCDLNLKLGVANEFKDELRFYFPHNLDFRGRAYP 180
Query: 438 MHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENH 497
+HPHLNH+G D+CRGLL FAE RPLG G+ WL + +AN + I+K+ ++GR F + +
Sbjct: 181 LHPHLNHMGPDVCRGLLTFAEARPLGPDGIGWLYVLIANSWGKSIDKMDFEGRRQFAQRN 240
Query: 498 IHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNG 557
+ + DSA+ P++G+RWW + E P+Q LAAC+ + +AL S +P + +S LP+ DGSCNG
Sbjct: 241 LEAVLDSAERPLDGHRWWTKGEKPWQLLAACMEVRDALASGNPAAYLSRLPVQIDGSCNG 300
Query: 558 LQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVL 617
LQHYAALGRD+ +AVNL P DVY EIAV V+ ++ D+ K P AL L
Sbjct: 301 LQHYAALGRDKAGGSAVNLRPAPAPQDVYGEIAVEVNKMVAADAEKG---VPEAL---AL 354
Query: 618 IDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAAL 677
I+RKLVKQTVMTSVYGVTY+GAR QI+ RL E+G +D+ L+ A YAA++TL L
Sbjct: 355 QGHINRKLVKQTVMTSVYGVTYVGARQQIQNRLLERGWSNNDQ-LYRCASYAARLTLQGL 413
Query: 678 GEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
E F+ A GIM WLG CA ++A + AV W TPLGLPV+QPY + +H+V
Sbjct: 414 EEKFDKAVGIMRWLGQCASIVASQGNAVAWHTPLGLPVLQPYREKYKHVV 463
>Q8J0W4_CRYNE (tr|Q8J0W4) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans PE=3 SV=1
Length = 1180
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 259/716 (36%), Positives = 379/716 (52%), Gaps = 79/716 (11%)
Query: 66 KEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC---VQLV 122
K AV + + AR K Q + + LP K+A+I + ++M M G ++++
Sbjct: 266 KAAVTPPKYSATARMKPQ--VLLMYLSLLPVDKLALITILEIMR--MSGSGGIADGMKVL 321
Query: 123 QAAVQIGMALEQEVRIH--KFLEGNKSLQSKKT-EADTEENLN----------NDKEKQR 169
+ V +G A+E E R K + G S KT + T++ ++ Q
Sbjct: 322 RGMVAVGKAVETEFRAETIKNVAGVDSYHWLKTIDPQTQKPSRQLIGSVWKKIGEQANQA 381
Query: 170 KFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN--QSAD 227
K V K L H ++ WSR Q +GS L++ L++ A V + +
Sbjct: 382 KRVGKNEGDKILPPNHDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGE 441
Query: 228 TPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK--CAKHXXXXXXXXXXX 285
+++PAF H ++ G+K+ GVI+ +P+V A L K
Sbjct: 442 MITELQPAFTHAYE---YVRGKKL----GVIKLNPVVAARLAKDDIGVVIHPKHLPMLVE 494
Query: 286 XKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFEALDILGNTKRRING 344
+ W ++KGG+L +MR S +QQ +K E ++ VF LD+L +T R+N
Sbjct: 495 PRPWTAHNKGGYLLHSVPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNR 554
Query: 345 RLLDVVESIWAGGGNVAGLVDCEN---VPLPDKPPTEDLKQIQEWKYRVRKAKKMNLER- 400
R+ DVV W G +A + E+ P+KP + D +Y V K K + ++
Sbjct: 555 RVFDVVLESWNRGEPIADIPPSEDKAHYEFPEKPDSSDQDPQMRVQY-VEKTKAVLAQQR 613
Query: 401 --HSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAE 458
H++RC + +AR +D FY PHN+DFRGRAYP+ PHL+ +G DLCRGLL F
Sbjct: 614 KDHAERCKFNYNIEIARSYL-KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGT 672
Query: 459 GRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRA 518
+PLG++GL+WL+IHLAN+Y G +K S+ R F + H DIFDSAD+P++G RWWL+A
Sbjct: 673 KKPLGETGLKWLQIHLANVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKA 730
Query: 519 EDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVA 578
EDP+QCLA C L+ ALRS +P++ S LP+HQDG+CNG+QHYAALG D A AVNL A
Sbjct: 731 EDPWQCLATCFELASALRSPNPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEA 790
Query: 579 KEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVT 638
++PAD+Y+ + V+ ++ D ALL K + + RK+VKQTVMT+VYGVT
Sbjct: 791 GDRPADIYTGVVDIVNKVVEEDKKAGHDI---ALLIK---EPLGRKVVKQTVMTTVYGVT 844
Query: 639 YIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI 698
++GARDQI K+L +G I + +F + Y AK L +G++F A+ IM WL A++I
Sbjct: 845 FVGARDQIAKQLHARGDIAQEH-IFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLI 903
Query: 699 AYE------------------------------NQAVHWTTPLGLPVVQPYCKTER 724
+ AV WTTPLGLPVVQPY K +
Sbjct: 904 SRSIPPARVQEAATNLTNTSRTGKVTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHK 959
>Q5KHP0_CRYNJ (tr|Q5KHP0) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CND05820 PE=3 SV=1
Length = 1180
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 259/716 (36%), Positives = 379/716 (52%), Gaps = 79/716 (11%)
Query: 66 KEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC---VQLV 122
K AV + + AR K Q + + LP K+A+I + ++M M G ++++
Sbjct: 266 KAAVTPPKYSATARMKPQ--VLLMYLSLLPVDKLALITILEIMR--MSGSGGIADGMKVL 321
Query: 123 QAAVQIGMALEQEVRIH--KFLEGNKSLQSKKT-EADTEENLN----------NDKEKQR 169
+ V +G A+E E R K + G S KT + T++ ++ Q
Sbjct: 322 RGMVAVGKAVETEFRAETIKNVAGVDSYHWLKTIDPQTQKPSRQLIGSVWKKIGEQANQA 381
Query: 170 KFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN--QSAD 227
K V K L H ++ WSR Q +GS L++ L++ A V + +
Sbjct: 382 KRVGKNEGDKILPPNHDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGE 441
Query: 228 TPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK--CAKHXXXXXXXXXXX 285
+++PAF H ++ G+K+ GVI+ +P+V A L K
Sbjct: 442 MITELQPAFTHAYE---YVRGKKL----GVIKLNPVVAARLAKDDIGVVIHPKHLPMLVE 494
Query: 286 XKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFEALDILGNTKRRING 344
+ W ++KGG+L +MR S +QQ +K E ++ VF LD+L +T R+N
Sbjct: 495 PRPWTAHNKGGYLLHSVPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNR 554
Query: 345 RLLDVVESIWAGGGNVAGLVDCEN---VPLPDKPPTEDLKQIQEWKYRVRKAKKMNLER- 400
R+ DVV W G +A + E+ P+KP + D +Y V K K + ++
Sbjct: 555 RVFDVVLESWNRGEPIADIPPSEDKAHYEFPEKPDSSDQDPQMRVQY-VEKTKAVLAQQR 613
Query: 401 --HSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAE 458
H++RC + +AR +D FY PHN+DFRGRAYP+ PHL+ +G DLCRGLL F
Sbjct: 614 KDHAERCKFNYNIEIARSYL-KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGT 672
Query: 459 GRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRA 518
+PLG++GL+WL+IHLAN+Y G +K S+ R F + H DIFDSAD+P++G RWWL+A
Sbjct: 673 KKPLGETGLKWLQIHLANVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKA 730
Query: 519 EDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVA 578
EDP+QCLA C L+ ALRS +P++ S LP+HQDG+CNG+QHYAALG D A AVNL A
Sbjct: 731 EDPWQCLATCFELASALRSPNPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEA 790
Query: 579 KEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVT 638
++PAD+Y+ + V+ ++ D ALL K + + RK+VKQTVMT+VYGVT
Sbjct: 791 GDRPADIYTGVVDIVNKVVEEDKKAGHDI---ALLIK---EPLGRKVVKQTVMTTVYGVT 844
Query: 639 YIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI 698
++GARDQI K+L +G I + +F + Y AK L +G++F A+ IM WL A++I
Sbjct: 845 FVGARDQIAKQLHARGDIAQEH-IFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLI 903
Query: 699 AYE------------------------------NQAVHWTTPLGLPVVQPYCKTER 724
+ AV WTTPLGLPVVQPY K +
Sbjct: 904 SRSIPPARVQEAATNLTNTSRTGKVTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHK 959
>F5HEC6_CRYNB (tr|F5HEC6) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=CNBD0570
PE=3 SV=1
Length = 1180
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 259/716 (36%), Positives = 379/716 (52%), Gaps = 79/716 (11%)
Query: 66 KEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC---VQLV 122
K AV + + AR K Q + + LP K+A+I + ++M M G ++++
Sbjct: 266 KAAVTPPKYSATARMKPQ--VLLMYLSLLPVDKLALITILEIMR--MSGSGGIADGMKVL 321
Query: 123 QAAVQIGMALEQEVRIH--KFLEGNKSLQSKKT-EADTEENLN----------NDKEKQR 169
+ V +G A+E E R K + G S KT + T++ ++ Q
Sbjct: 322 RGMVAVGKAVETEFRAETIKNVAGVDSYHWLKTIDPQTQKPSRQLIGSVWKKIGEQANQA 381
Query: 170 KFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN--QSAD 227
K V K L H ++ WSR Q +GS L++ L++ A V + +
Sbjct: 382 KRVGKNEGDKILPPNHDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGE 441
Query: 228 TPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK--CAKHXXXXXXXXXXX 285
+++PAF H ++ G+K+ GVI+ +P+V A L K
Sbjct: 442 MITELQPAFTHAYE---YVRGKKL----GVIKLNPVVAARLAKDDIGVVIHPKHLPMLVE 494
Query: 286 XKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFEALDILGNTKRRING 344
+ W ++KGG+L +MR S +QQ +K E ++ VF LD+L +T R+N
Sbjct: 495 PRPWTAHNKGGYLLHSVPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNR 554
Query: 345 RLLDVVESIWAGGGNVAGLVDCEN---VPLPDKPPTEDLKQIQEWKYRVRKAKKMNLER- 400
R+ DVV W G +A + E+ P+KP + D +Y V K K + ++
Sbjct: 555 RVFDVVLESWNRGEPIADIPPSEDKAHYEFPEKPDSSDQDPQMRVQY-VEKTKAVLAQQR 613
Query: 401 --HSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAE 458
H++RC + +AR +D FY PHN+DFRGRAYP+ PHL+ +G DLCRGLL F
Sbjct: 614 KDHAERCKFNYNIEIARSYL-KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGT 672
Query: 459 GRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRA 518
+PLG++GL+WL+IHLAN+Y G +K S+ R F + H DIFDSAD+P++G RWWL+A
Sbjct: 673 KKPLGETGLKWLQIHLANVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKA 730
Query: 519 EDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVA 578
EDP+QCLA C L+ ALRS +P++ S LP+HQDG+CNG+QHYAALG D A AVNL A
Sbjct: 731 EDPWQCLATCFELASALRSPNPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEA 790
Query: 579 KEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVT 638
++PAD+Y+ + V+ ++ D ALL K + + RK+VKQTVMT+VYGVT
Sbjct: 791 GDRPADIYTGVVDIVNKVVEEDKKAGHDI---ALLIK---EPLGRKVVKQTVMTTVYGVT 844
Query: 639 YIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI 698
++GARDQI K+L +G I + +F + Y AK L +G++F A+ IM WL A++I
Sbjct: 845 FVGARDQIAKQLHARGDIAQEH-IFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLI 903
Query: 699 AYE------------------------------NQAVHWTTPLGLPVVQPYCKTER 724
+ AV WTTPLGLPVVQPY K +
Sbjct: 904 SRSIPPARVQEAATNLTNTSRTGKVTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHK 959
>F6KJR6_CRYGA (tr|F6KJR6) DNA-directed RNA polymerase OS=Cryptococcus gattii PE=3
SV=1
Length = 1180
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 247/692 (35%), Positives = 367/692 (53%), Gaps = 85/692 (12%)
Query: 94 LPAAKVAVIVMHKMMSLVMENEEGC---VQLVQAAVQIGMALEQEVRIH----------- 139
LP K+A+I + ++M M G +++++ V +G A+E E R
Sbjct: 292 LPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETEFRAETIKNVAGVDSY 349
Query: 140 ---KFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPW 196
K ++ S++ + + + ++ G +R L H ++ W
Sbjct: 350 HWLKTIDPQTQKPSRQLIGSVWKKIGEQANQAKRLGKGEAERI-LPPNHDDMQDIWTPAW 408
Query: 197 SRAAQAKLGSRLIELLIETAYVHSPVN--QSADTPPDIRPAFRHGFKPQSRSPGQKILKN 254
SR Q +GS L++ L++ A V + + +++PAF H ++ G+K+
Sbjct: 409 SRMIQLGVGSELVDALLKVAKVERTARDRNTGEIVMELQPAFTHAYE---YVRGKKL--- 462
Query: 255 YGVIQCDPLVLAGLEK--CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRK 312
GVI+ +P+V A L K + W ++KGG+L +MR S +
Sbjct: 463 -GVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKESLE 521
Query: 313 QQDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCEN--- 368
QQ +K E ++ VF LD+L +T RIN R+ DVV W G +A + E+
Sbjct: 522 QQKWLKAASEEGHLEPVFHGLDVLSSTPWRINRRVFDVVLESWNKGEPIADIPPSEDKAH 581
Query: 369 VPLPDKPPTEDLKQIQEWKYRVRKAKKMNL------ERHSQRCDTELKLSVARKMKDEDC 422
P+KP + D Q+ + RV+ +K + H++RC + +AR +D
Sbjct: 582 YEFPEKPDSSD----QDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYL-KDT 636
Query: 423 FYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGI 482
FY PHN+DFRGRAYP+ PHL+ +G DLCRGLL F +PLG++GL+WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY--GY 694
Query: 483 EKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNS 542
+K S+ R F + H DIFDSAD+P++G RWWL+AEDP+QCLA C L+ ALRS +P++
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPNPSA 754
Query: 543 VISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSN 602
S LP+HQDG+CNG+QHYAALG D A AVNL A ++PAD+Y+ + V+ ++ D
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTGVVDIVNKVVEEDKK 814
Query: 603 KDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLL 662
ALL K + + RK+VKQTVMT+VYGVT++GARDQI K+L +G I + +
Sbjct: 815 AGHDI---ALLIK---EPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQEH-I 867
Query: 663 FTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYE--------------------- 701
F + Y AK L +G++F A+ IM WL A++I+
Sbjct: 868 FAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRIQEAATNLTSTSRTGK 927
Query: 702 ---------NQAVHWTTPLGLPVVQPYCKTER 724
AV WTTPLGLPVVQPY K +
Sbjct: 928 VTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHK 959
>Q8J0Y5_CRYNE (tr|Q8J0Y5) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans PE=3 SV=1
Length = 1202
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 259/716 (36%), Positives = 379/716 (52%), Gaps = 79/716 (11%)
Query: 66 KEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC---VQLV 122
K AV + + AR K Q + + LP K+A+I + ++M M G ++++
Sbjct: 266 KAAVTPPKYSATARMKPQ--VLLMYLSLLPVDKLALITILEIMR--MSGSGGIADGMKVL 321
Query: 123 QAAVQIGMALEQEVRIH--KFLEGNKSLQSKKT-EADTEENLN----------NDKEKQR 169
+ V +G A+E E R K + G S KT + T++ ++ Q
Sbjct: 322 RGMVAVGKAVETEFRAETIKNVAGVDSYHWLKTIDPQTQKPSRQLIGSVWKKIGEQANQA 381
Query: 170 KFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN--QSAD 227
K V K L H ++ WSR Q +GS L++ L++ A V + +
Sbjct: 382 KRVGKNEGDKILPPNHDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGE 441
Query: 228 TPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK--CAKHXXXXXXXXXXX 285
+++PAF H ++ G+K+ GVI+ +P+V A L K
Sbjct: 442 MITELQPAFTHAYE---YVRGKKL----GVIKLNPVVAARLAKDDIGVVIHPKHLPMLVE 494
Query: 286 XKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFEALDILGNTKRRING 344
+ W ++KGG+L +MR S +QQ +K E ++ VF LD+L +T R+N
Sbjct: 495 PRPWTAHNKGGYLLHSVPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNR 554
Query: 345 RLLDVVESIWAGGGNVAGLVDCEN---VPLPDKPPTEDLKQIQEWKYRVRKAKKMNLER- 400
R+ DVV W G +A + E+ P+KP + D +Y V K K + ++
Sbjct: 555 RVFDVVLESWNRGEPIADIPPSEDKAHYEFPEKPDSSDQDPQMRVQY-VEKTKAVLAQQR 613
Query: 401 --HSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAE 458
H++RC + +AR +D FY PHN+DFRGRAYP+ PHL+ +G DLCRGLL F
Sbjct: 614 KDHAERCKFNYNIEIARSYL-KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGN 672
Query: 459 GRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRA 518
+PLG++GL+WL+IHLAN+Y G +K S+ R F + H DIFDSAD+P++G RWWL+A
Sbjct: 673 QKPLGETGLKWLQIHLANVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKA 730
Query: 519 EDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVA 578
EDP+QCLA C L+ ALRS +P++ S LP+HQDG+CNG+QHYAALG D A AVNL A
Sbjct: 731 EDPWQCLATCFELASALRSPNPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEA 790
Query: 579 KEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVT 638
++PAD+Y+ + V+ ++ D ALL K + + RK+VKQTVMT+VYGVT
Sbjct: 791 GDRPADIYTGVVDIVNKVVEEDKKAGHDI---ALLIK---EPLGRKVVKQTVMTTVYGVT 844
Query: 639 YIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI 698
++GARDQI K+L +G I + +F + Y AK L +G++F A+ IM WL A++I
Sbjct: 845 FVGARDQIAKQLHARGDIAQEH-IFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLI 903
Query: 699 AYE------------------------------NQAVHWTTPLGLPVVQPYCKTER 724
+ AV WTTPLGLPVVQPY K +
Sbjct: 904 SRSIPPTRVQEAATNLTNTSRTGKVTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHK 959
>Q5KHN9_CRYNJ (tr|Q5KHN9) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CND05820 PE=3 SV=1
Length = 1202
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 259/716 (36%), Positives = 379/716 (52%), Gaps = 79/716 (11%)
Query: 66 KEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC---VQLV 122
K AV + + AR K Q + + LP K+A+I + ++M M G ++++
Sbjct: 266 KAAVTPPKYSATARMKPQ--VLLMYLSLLPVDKLALITILEIMR--MSGSGGIADGMKVL 321
Query: 123 QAAVQIGMALEQEVRIH--KFLEGNKSLQSKKT-EADTEENLN----------NDKEKQR 169
+ V +G A+E E R K + G S KT + T++ ++ Q
Sbjct: 322 RGMVAVGKAVETEFRAETIKNVAGVDSYHWLKTIDPQTQKPSRQLIGSVWKKIGEQANQA 381
Query: 170 KFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN--QSAD 227
K V K L H ++ WSR Q +GS L++ L++ A V + +
Sbjct: 382 KRVGKNEGDKILPPNHDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGE 441
Query: 228 TPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK--CAKHXXXXXXXXXXX 285
+++PAF H ++ G+K+ GVI+ +P+V A L K
Sbjct: 442 MITELQPAFTHAYE---YVRGKKL----GVIKLNPVVAARLAKDDIGVVIHPKHLPMLVE 494
Query: 286 XKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFEALDILGNTKRRING 344
+ W ++KGG+L +MR S +QQ +K E ++ VF LD+L +T R+N
Sbjct: 495 PRPWTAHNKGGYLLHSVPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNR 554
Query: 345 RLLDVVESIWAGGGNVAGLVDCEN---VPLPDKPPTEDLKQIQEWKYRVRKAKKMNLER- 400
R+ DVV W G +A + E+ P+KP + D +Y V K K + ++
Sbjct: 555 RVFDVVLESWNRGEPIADIPPSEDKAHYEFPEKPDSSDQDPQMRVQY-VEKTKAVLAQQR 613
Query: 401 --HSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAE 458
H++RC + +AR +D FY PHN+DFRGRAYP+ PHL+ +G DLCRGLL F
Sbjct: 614 KDHAERCKFNYNIEIARSYL-KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGT 672
Query: 459 GRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRA 518
+PLG++GL+WL+IHLAN+Y G +K S+ R F + H DIFDSAD+P++G RWWL+A
Sbjct: 673 KKPLGETGLKWLQIHLANVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKA 730
Query: 519 EDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVA 578
EDP+QCLA C L+ ALRS +P++ S LP+HQDG+CNG+QHYAALG D A AVNL A
Sbjct: 731 EDPWQCLATCFELASALRSPNPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEA 790
Query: 579 KEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVT 638
++PAD+Y+ + V+ ++ D ALL K + + RK+VKQTVMT+VYGVT
Sbjct: 791 GDRPADIYTGVVDIVNKVVEEDKKAGHDI---ALLIK---EPLGRKVVKQTVMTTVYGVT 844
Query: 639 YIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI 698
++GARDQI K+L +G I + +F + Y AK L +G++F A+ IM WL A++I
Sbjct: 845 FVGARDQIAKQLHARGDIAQEH-IFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLI 903
Query: 699 AYE------------------------------NQAVHWTTPLGLPVVQPYCKTER 724
+ AV WTTPLGLPVVQPY K +
Sbjct: 904 SRSIPPARVQEAATNLTNTSRTGKVTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHK 959
>F5HH15_CRYNB (tr|F5HH15) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=CNBD0570
PE=3 SV=1
Length = 1202
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 259/716 (36%), Positives = 379/716 (52%), Gaps = 79/716 (11%)
Query: 66 KEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC---VQLV 122
K AV + + AR K Q + + LP K+A+I + ++M M G ++++
Sbjct: 266 KAAVTPPKYSATARMKPQ--VLLMYLSLLPVDKLALITILEIMR--MSGSGGIADGMKVL 321
Query: 123 QAAVQIGMALEQEVRIH--KFLEGNKSLQSKKT-EADTEENLN----------NDKEKQR 169
+ V +G A+E E R K + G S KT + T++ ++ Q
Sbjct: 322 RGMVAVGKAVETEFRAETIKNVAGVDSYHWLKTIDPQTQKPSRQLIGSVWKKIGEQANQA 381
Query: 170 KFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN--QSAD 227
K V K L H ++ WSR Q +GS L++ L++ A V + +
Sbjct: 382 KRVGKNEGDKILPPNHDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGE 441
Query: 228 TPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK--CAKHXXXXXXXXXXX 285
+++PAF H ++ G+K+ GVI+ +P+V A L K
Sbjct: 442 MITELQPAFTHAYE---YVRGKKL----GVIKLNPVVAARLAKDDIGVVIHPKHLPMLVE 494
Query: 286 XKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFEALDILGNTKRRING 344
+ W ++KGG+L +MR S +QQ +K E ++ VF LD+L +T R+N
Sbjct: 495 PRPWTAHNKGGYLLHSVPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNR 554
Query: 345 RLLDVVESIWAGGGNVAGLVDCEN---VPLPDKPPTEDLKQIQEWKYRVRKAKKMNLER- 400
R+ DVV W G +A + E+ P+KP + D +Y V K K + ++
Sbjct: 555 RVFDVVLESWNRGEPIADIPPSEDKAHYEFPEKPDSSDQDPQMRVQY-VEKTKAVLAQQR 613
Query: 401 --HSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAE 458
H++RC + +AR +D FY PHN+DFRGRAYP+ PHL+ +G DLCRGLL F
Sbjct: 614 KDHAERCKFNYNIEIARSYL-KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGT 672
Query: 459 GRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRA 518
+PLG++GL+WL+IHLAN+Y G +K S+ R F + H DIFDSAD+P++G RWWL+A
Sbjct: 673 KKPLGETGLKWLQIHLANVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKA 730
Query: 519 EDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVA 578
EDP+QCLA C L+ ALRS +P++ S LP+HQDG+CNG+QHYAALG D A AVNL A
Sbjct: 731 EDPWQCLATCFELASALRSPNPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEA 790
Query: 579 KEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVT 638
++PAD+Y+ + V+ ++ D ALL K + + RK+VKQTVMT+VYGVT
Sbjct: 791 GDRPADIYTGVVDIVNKVVEEDKKAGHDI---ALLIK---EPLGRKVVKQTVMTTVYGVT 844
Query: 639 YIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI 698
++GARDQI K+L +G I + +F + Y AK L +G++F A+ IM WL A++I
Sbjct: 845 FVGARDQIAKQLHARGDIAQEH-IFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLI 903
Query: 699 AYE------------------------------NQAVHWTTPLGLPVVQPYCKTER 724
+ AV WTTPLGLPVVQPY K +
Sbjct: 904 SRSIPPARVQEAATNLTNTSRTGKVTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHK 959
>Q4PBM0_USTMA (tr|Q4PBM0) DNA-directed RNA polymerase OS=Ustilago maydis (strain
521 / FGSC 9021) GN=UM02493.1 PE=3 SV=1
Length = 1566
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 250/700 (35%), Positives = 374/700 (53%), Gaps = 87/700 (12%)
Query: 87 IAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQLVQAAVQIGMALEQEVRIHKFLEGN 145
I P + LPA+K+A+I + ++M + + ++ +A +Q+G A+E E +
Sbjct: 635 ILPFLRLLPASKLALITILELMRMSGNGDVSDGMKTTRAVLQVGRAIEMEYHSDIVRKNP 694
Query: 146 KSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEE-------VSPWSR 198
K Q+ T T RK GLI +E+ KQ+E + W++
Sbjct: 695 KIFQNAYTAQTT----------LRK--RGLIDLAARREIKAWQKQQEDEGVLSSIPSWTQ 742
Query: 199 AAQAKLGSRLIELLIETAYVH-SPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGV 257
+A++GS L++ L+ A V+ ++ + +PAF ++ G+K+ GV
Sbjct: 743 TVRARVGSYLVQHLMNVATVNRKATDRDGVLWEEDQPAFYSTYQYLG---GKKL----GV 795
Query: 258 IQCDPLVLAGLEKCAKHXXXXXXXXXXXX--KKWKGYDKGGHLFLPSYIMRTHGSRKQQD 315
I+ + ++ L+K + K W +D GG+ + MR S +Q
Sbjct: 796 IKLNEVIARRLDKDSIQETLHPRHLPMLVPPKPWTSHDSGGYYSVRQSAMRYKDSAEQGS 855
Query: 316 VMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPD 373
++ + V ALD+LGNT +IN + DV+ +W G ++A + E VP P
Sbjct: 856 YLRVASDNGDLDTVLAALDVLGNTSWKINKPIFDVMLEVWNSGKDIADMPPVEMEVPEPQ 915
Query: 374 KPPT--EDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDF 431
KP D+K + R+++ + HSQRCD KL +AR E FY+PHN+DF
Sbjct: 916 KPDNYDHDIKARSVYLQRLKQWNQQRASNHSQRCDVNYKLEIARAYLGER-FYFPHNMDF 974
Query: 432 RGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRL 491
RGRAYPM PHLNH+G+DLCRGLL FA+ +PLGK+GLRWL+IH++N++ G +K S+ R
Sbjct: 975 RGRAYPMPPHLNHIGNDLCRGLLLFADSKPLGKAGLRWLRIHISNVF--GYDKASFGERE 1032
Query: 492 GFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALR-SSSPNSVISHLPIH 550
F +H DI DS + P++GN WWL+A+DP+QCLAAC+ L AL + P + S LP+H
Sbjct: 1033 QFAIDHEADIRDSVERPLDGNCWWLKADDPWQCLAACMELKAALEHAEGPEAYESCLPVH 1092
Query: 551 QDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPN 610
QDG+CNGLQHYAALG D A VNL E+PADVYS +A V ++ ++ K
Sbjct: 1093 QDGTCNGLQHYAALGGDLAGAKQVNLSRGERPADVYSGVADLVIKVLDEEAAK------G 1146
Query: 611 ALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAA 670
LA +L ++ RK+VKQTVMT+VYGVT+IGA++Q+ ++L ++G + + LF AA + A
Sbjct: 1147 ERLASILQGKVTRKVVKQTVMTTVYGVTFIGAKNQVMRQLADRGDVPAED-LFAAASFLA 1205
Query: 671 KVTLAALGEVFEAARGIMSWLGDCAKVIAY------------------------------ 700
KV ++ +G +F A+ I WL AKVIA
Sbjct: 1206 KVIMSCIGNLFSGAQKIQDWLSFSAKVIAKSIPAQRLEEATRPYQPNESTLKRADARGFS 1265
Query: 701 ------------ENQAVHWTTPLGLPVVQPYCKTERHLVS 728
+ +V WTT LGLPVVQPY K+++ VS
Sbjct: 1266 RDPAKADRIVKEQMTSVIWTTALGLPVVQPYRKSKKKQVS 1305
>Q8J122_CRYNV (tr|Q8J122) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. grubii PE=3 SV=2
Length = 1202
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 259/716 (36%), Positives = 378/716 (52%), Gaps = 79/716 (11%)
Query: 66 KEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC---VQLV 122
K AV + + AR K Q + + LP K+A+I + ++M M G ++++
Sbjct: 266 KAAVTPPKYSATARMKPQ--VLLMYLSLLPVDKLALITILEIMR--MSGSGGIADGMKVL 321
Query: 123 QAAVQIGMALEQEVRIH--KFLEGNKSLQSKKT-EADTEENLN----------NDKEKQR 169
+ V +G A+E E R K + G S KT + T++ ++ Q
Sbjct: 322 RGMVAVGKAVETEFRAETIKNVAGVDSYHWLKTIDPQTQKPSRQLIGSVWKKIGEQANQA 381
Query: 170 KFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN--QSAD 227
K V + L H ++ WSR Q +GS L++ L++ A V + +
Sbjct: 382 KRVGKNEGGRILPPNHDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKDRNTGE 441
Query: 228 TPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK--CAKHXXXXXXXXXXX 285
+++PAF H ++ G+K+ GVI+ +P+V A L K
Sbjct: 442 IITELQPAFTHAYE---YVRGKKL----GVIKLNPVVAARLAKDDIGVVIHPKHLPMLVE 494
Query: 286 XKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFEALDILGNTKRRING 344
+ W ++KGG+L +MR S +QQ +K E ++ VF LD+L +T R+N
Sbjct: 495 PRPWTAHNKGGYLLHSVPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTPWRVNR 554
Query: 345 RLLDVVESIWAGGGNVAGLVDCEN---VPLPDKPPTEDLKQIQEWKYRVRKAKKMNLER- 400
R+ DVV W G +A + E+ P+KP + D +Y V K K + ++
Sbjct: 555 RVFDVVLESWNRGEPIADIPPSEDKAHYEFPEKPDSSDQDPQMRVQY-VEKTKAVLAQQR 613
Query: 401 --HSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAE 458
H++RC + +AR +D FY PHN+DFRGRAYP+ PHL+ +G DLCRGLL F
Sbjct: 614 KDHAERCKFNYNIEIARSYL-KDIFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGT 672
Query: 459 GRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRA 518
+PLG++GL+WL+IHLAN+Y G +K S+ R F + H DIFDSAD+P++G RWWL+A
Sbjct: 673 KKPLGETGLKWLQIHLANVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKRWWLKA 730
Query: 519 EDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVA 578
EDP+QCLA C L+ ALRS P++ S LP+HQDG+CNG+QHYAALG D A AVNL A
Sbjct: 731 EDPWQCLATCFELAAALRSPIPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEA 790
Query: 579 KEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVT 638
++PAD+YS + V+ ++ D ALL K + + RK+VKQTVMT+VYGVT
Sbjct: 791 GDRPADIYSGVVDIVNKVVEEDKKAGHDI---ALLIK---EPLGRKVVKQTVMTTVYGVT 844
Query: 639 YIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI 698
++GARDQI K+L +G I + +F + Y AK L +G++F A+ IM WL A++I
Sbjct: 845 FVGARDQIAKQLHARGDIAQEH-IFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLI 903
Query: 699 AYE------------------------------NQAVHWTTPLGLPVVQPYCKTER 724
+ AV WTTPLGLPVVQPY K +
Sbjct: 904 SRSIPPTRVQEAATNLTSTSRTGKITSRAAKEFMSAVIWTTPLGLPVVQPYRKAHK 959
>J9VMK4_CRYNH (tr|J9VMK4) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. grubii serotype A (strain H99 / ATCC 208821 / CBS
10515 / FGSC 9487) GN=CNAG_07409 PE=3 SV=1
Length = 1324
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 259/721 (35%), Positives = 378/721 (52%), Gaps = 89/721 (12%)
Query: 66 KEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC---VQLV 122
K AV + + AR K Q + + LP K+A+I + ++M M G ++++
Sbjct: 388 KAAVTPPKYSATARMKPQ--VLLMYLSLLPVDKLALITILEIMR--MSGSGGIADGMKVL 443
Query: 123 QAAVQIGMALEQEVRIH--KFLEGNKSLQSKKT-EADTE---------------ENLNND 164
+ V +G A+E E R K + G S KT + T+ E N
Sbjct: 444 RGMVAVGKAVETEFRAETIKNVAGVDSYHWLKTIDPQTQKPSRQLIGSVWKKIGEQANQA 503
Query: 165 KEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN- 223
K + G+ L H ++ WSR Q +GS L++ L++ A V
Sbjct: 504 KRVGKNEGGGI-----LPPNHDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKD 558
Query: 224 -QSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK--CAKHXXXXXX 280
+ + +++PAF H ++ G+K+ GVI+ +P+V A L K
Sbjct: 559 RNTGEIITELQPAFTHAYE---YVRGKKL----GVIKLNPVVAARLAKDDIGVVIHPKHL 611
Query: 281 XXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFEALDILGNTK 339
+ W ++KGG+L +MR S +QQ +K E ++ VF LD+L +T
Sbjct: 612 PMLVEPRPWTAHNKGGYLLHSVPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTP 671
Query: 340 RRINGRLLDVVESIWAGGGNVAGLVDCEN---VPLPDKPPTEDLKQIQEWKYRVRKAKKM 396
R+N R+ DVV W G +A + E+ P+KP + D +Y V K K +
Sbjct: 672 WRVNRRVFDVVLESWNRGEPIADIPPSEDKAHYEFPEKPDSSDQDPQMRVQY-VEKTKAV 730
Query: 397 NLER---HSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGL 453
++ H++RC + +AR +D FY PHN+DFRGRAYP+ PHL+ +G DLCRGL
Sbjct: 731 LAQQRKDHAERCKFNYNIEIARSYL-KDIFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGL 789
Query: 454 LEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNR 513
L F +PLG++GL+WL+IHLAN+Y G +K S+ R F + H DIFDSAD+P++G R
Sbjct: 790 LTFGTKKPLGETGLKWLQIHLANVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKR 847
Query: 514 WWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAA 573
WWL+AEDP+QCLA C L+ ALRS +P++ S LP+HQDG+CNG+QHYAALG D A A
Sbjct: 848 WWLKAEDPWQCLATCFELAAALRSPNPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKA 907
Query: 574 VNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTS 633
VNL A ++PAD+Y+ + V+ ++ D ALL K + + RK+VKQTVMT+
Sbjct: 908 VNLEAGDRPADIYTGVVDIVNKVVEEDKKAGHDI---ALLIK---EPLGRKVVKQTVMTT 961
Query: 634 VYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGD 693
VYGVT++GARDQI K+L +G I + +F + Y AK L +G++F A+ IM WL
Sbjct: 962 VYGVTFVGARDQIAKQLHARGDIAQEH-IFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTT 1020
Query: 694 CAKVIAYE------------------------------NQAVHWTTPLGLPVVQPYCKTE 723
A++I+ AV WTTPLGLPVVQPY K
Sbjct: 1021 SARLISRSIPPTRVQEAATNLTSTSRTGKITSRAAKEFMSAVIWTTPLGLPVVQPYRKAH 1080
Query: 724 R 724
+
Sbjct: 1081 K 1081
>Q8J0Z4_CRYNV (tr|Q8J0Z4) DNA-directed RNA polymerase OS=Cryptococcus neoformans
var. grubii PE=3 SV=1
Length = 1180
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 259/721 (35%), Positives = 378/721 (52%), Gaps = 89/721 (12%)
Query: 66 KEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC---VQLV 122
K AV + + AR K Q + + LP K+A+I + ++M M G ++++
Sbjct: 266 KAAVTPPKYSATARMKPQ--VLLMYLSLLPVDKLALITILEIMR--MSGSGGIADGMKVL 321
Query: 123 QAAVQIGMALEQEVRIH--KFLEGNKSLQSKKT-EADTE---------------ENLNND 164
+ V +G A+E E R K + G S KT + T+ E N
Sbjct: 322 RGMVAVGKAVETEFRAETIKNVAGVDSYHWLKTIDPQTQKPSRQLIGSVWKKIGEQANQA 381
Query: 165 KEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN- 223
K + G+ L H ++ WSR Q +GS L++ L++ A V
Sbjct: 382 KRVGKNEGGGI-----LPPNHDDMQDIWTPAWSRMIQLGVGSELVDALLKVAKVERTAKD 436
Query: 224 -QSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK--CAKHXXXXXX 280
+ + +++PAF H ++ G+K+ GVI+ +P+V A L K
Sbjct: 437 RNTGEIITELQPAFTHAYE---YVRGKKL----GVIKLNPVVAARLAKDDIGVVIHPKHL 489
Query: 281 XXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFEALDILGNTK 339
+ W ++KGG+L +MR S +QQ +K E ++ VF LD+L +T
Sbjct: 490 PMLVEPRPWTAHNKGGYLLHSVPVMRYKESLEQQKWLKAASEEGHLEPVFHGLDVLSSTP 549
Query: 340 RRINGRLLDVVESIWAGGGNVAGLVDCEN---VPLPDKPPTEDLKQIQEWKYRVRKAKKM 396
R+N R+ DVV W G +A + E+ P+KP + D +Y V K K +
Sbjct: 550 WRVNRRVFDVVLESWNRGEPIADIPPSEDKAHYEFPEKPDSSDQDPQMRVQY-VEKTKAV 608
Query: 397 NLER---HSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGL 453
++ H++RC + +AR +D FY PHN+DFRGRAYP+ PHL+ +G DLCRGL
Sbjct: 609 LAQQRKDHAERCKFNYNIEIARSYL-KDIFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGL 667
Query: 454 LEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNR 513
L F +PLG++GL+WL+IHLAN+Y G +K S+ R F + H DIFDSAD+P++G R
Sbjct: 668 LTFGTKKPLGETGLKWLQIHLANVY--GYDKASFAERARFAQEHEADIFDSADHPLDGKR 725
Query: 514 WWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAA 573
WWL+AEDP+QCLA C L+ ALRS +P++ S LP+HQDG+CNG+QHYAALG D A A
Sbjct: 726 WWLKAEDPWQCLATCFELAAALRSPNPSAYESSLPVHQDGTCNGMQHYAALGGDVRGAKA 785
Query: 574 VNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTS 633
VNL A ++PAD+Y+ + V+ ++ D ALL K + + RK+VKQTVMT+
Sbjct: 786 VNLEAGDRPADIYTGVVDIVNKVVEEDKKAGHDI---ALLIK---EPLGRKVVKQTVMTT 839
Query: 634 VYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGD 693
VYGVT++GARDQI K+L +G I + +F + Y AK L +G++F A+ IM WL
Sbjct: 840 VYGVTFVGARDQIAKQLHARGDIAQEH-IFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTT 898
Query: 694 CAKVIAYE------------------------------NQAVHWTTPLGLPVVQPYCKTE 723
A++I+ AV WTTPLGLPVVQPY K
Sbjct: 899 SARLISRSIPPTRVQEAATNLTSTSRTGKITSRAAKEFMSAVIWTTPLGLPVVQPYRKAH 958
Query: 724 R 724
+
Sbjct: 959 K 959
>Q5Y227_CRYGA (tr|Q5Y227) DNA-directed RNA polymerase OS=Cryptococcus gattii
GN=RPO41 PE=3 SV=1
Length = 1180
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 245/692 (35%), Positives = 366/692 (52%), Gaps = 85/692 (12%)
Query: 94 LPAAKVAVIVMHKMMSLVMENEEGC---VQLVQAAVQIGMALEQEVRIH----------- 139
LP K+A+I + ++M M G +++++ V +G A+E E R
Sbjct: 292 LPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETEFRAETIKNVAGVDSY 349
Query: 140 ---KFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPW 196
K ++ S++ + + + ++ G +R L H ++ W
Sbjct: 350 HWLKTIDPQTQKPSRQLIGSVWKKIGEQANQAKRLGKGEAERI-LPPNHDDMQDIWTPAW 408
Query: 197 SRAAQAKLGSRLIELLIETAYVHSPVN--QSADTPPDIRPAFRHGFKPQSRSPGQKILKN 254
SR Q +GS L++ L++ V + + +++PAF H ++ G+K+
Sbjct: 409 SRMIQLGVGSELVDALLKVTKVERTARDRNTGEIVMELQPAFTHAYE---YVRGKKL--- 462
Query: 255 YGVIQCDPLVLAGLEK--CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRK 312
GVI+ +P+V A L K + W ++KGG+L +MR S +
Sbjct: 463 -GVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKESLE 521
Query: 313 QQDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCEN--- 368
QQ +K E ++ VF LD+L +T +IN R+ DVV W G +A + E+
Sbjct: 522 QQKWLKAASEEGHLEPVFHGLDVLSSTPWQINRRVFDVVLESWNKGEPIADIPPSEDKAH 581
Query: 369 VPLPDKPPTEDLKQIQEWKYRVRKAKKMNL------ERHSQRCDTELKLSVARKMKDEDC 422
P+KP + D Q+ + RV+ +K + H++RC + +AR +D
Sbjct: 582 YEFPEKPDSSD----QDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYL-KDT 636
Query: 423 FYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGI 482
FY PHN+DFRGRAYP+ PHL+ +G DLCRGLL F +PLG++GL+WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY--GY 694
Query: 483 EKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNS 542
+K S+ R F + H DIFDSAD+P++G RWWL+AEDP+QCLA C L+ ALRS +P++
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPNPSA 754
Query: 543 VISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSN 602
S LP+HQDG+CNG+QHYAALG D A AVNL A ++PAD+Y+ + V+ ++ D
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTGVVDIVNKVVEEDKK 814
Query: 603 KDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLL 662
ALL K + + RK+VKQTVMT+VYGVT++GARDQI K+L +G I + +
Sbjct: 815 AGHDI---ALLIK---EPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQEH-I 867
Query: 663 FTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYE--------------------- 701
F + Y AK L +G++F A+ IM WL A++I+
Sbjct: 868 FVVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRIQEAATNLTSTSRTGK 927
Query: 702 ---------NQAVHWTTPLGLPVVQPYCKTER 724
AV WTTPLGLPVVQPY K +
Sbjct: 928 VTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHK 959
>E6RBT1_CRYGW (tr|E6RBT1) DNA-directed RNA polymerase OS=Cryptococcus gattii
serotype B (strain WM276 / ATCC MYA-4071) GN=CGB_I1030W
PE=3 SV=1
Length = 1180
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 245/692 (35%), Positives = 366/692 (52%), Gaps = 85/692 (12%)
Query: 94 LPAAKVAVIVMHKMMSLVMENEEGC---VQLVQAAVQIGMALEQEVRIH----------- 139
LP K+A+I + ++M M G +++++ V +G A+E E R
Sbjct: 292 LPVDKLALITILEIMR--MSGSGGIADGMKVLRGMVAVGKAVETEFRAETIKNVAGVDSY 349
Query: 140 ---KFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPW 196
K ++ S++ + + + ++ G +R L H ++ W
Sbjct: 350 HWLKTIDPQTQKPSRQLIGSVWKKIGEQANQAKRLGKGEAERI-LPPNHDDMQDIWTPAW 408
Query: 197 SRAAQAKLGSRLIELLIETAYVHSPVN--QSADTPPDIRPAFRHGFKPQSRSPGQKILKN 254
SR Q +GS L++ L++ V + + +++PAF H ++ G+K+
Sbjct: 409 SRMIQLGVGSELVDALLKVTKVERTARDRNTGEIVMELQPAFTHAYE---YVRGKKL--- 462
Query: 255 YGVIQCDPLVLAGLEK--CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRK 312
GVI+ +P+V A L K + W ++KGG+L +MR S +
Sbjct: 463 -GVIKLNPVVAARLAKDDIGVVIHPKHLPMLVEPRPWTAHNKGGYLLHSVPVMRYKESLE 521
Query: 313 QQDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCEN--- 368
QQ +K E ++ VF LD+L +T +IN R+ DVV W G +A + E+
Sbjct: 522 QQKWLKAASEEGHLEPVFHGLDVLSSTPWQINRRVFDVVLESWNKGEPIADIPPSEDKAH 581
Query: 369 VPLPDKPPTEDLKQIQEWKYRVRKAKKMNL------ERHSQRCDTELKLSVARKMKDEDC 422
P+KP + D Q+ + RV+ +K + H++RC + +AR +D
Sbjct: 582 YEFPEKPDSSD----QDPQVRVQYVEKTKAVLAQQRKDHAERCKFNYNIEIARSYL-KDT 636
Query: 423 FYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGI 482
FY PHN+DFRGRAYP+ PHL+ +G DLCRGLL F +PLG++GL+WL+IHLAN+Y G
Sbjct: 637 FYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGETGLKWLQIHLANVY--GY 694
Query: 483 EKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNS 542
+K S+ R F + H DIFDSAD+P++G RWWL+AEDP+QCLA C L+ ALRS +P++
Sbjct: 695 DKASFAERARFAQEHEADIFDSADHPLDGKRWWLKAEDPWQCLATCFELAAALRSPNPSA 754
Query: 543 VISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSN 602
S LP+HQDG+CNG+QHYAALG D A AVNL A ++PAD+Y+ + V+ ++ D
Sbjct: 755 YESSLPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTGVVDIVNKVVEEDKK 814
Query: 603 KDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLL 662
ALL K + + RK+VKQTVMT+VYGVT++GARDQI K+L +G I + +
Sbjct: 815 AGHDI---ALLIK---EPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLHARGDIAQEH-I 867
Query: 663 FTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYE--------------------- 701
F + Y AK L +G++F A+ IM WL A++I+
Sbjct: 868 FVVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSIPPTRIQEAATNLTSTSRTGK 927
Query: 702 ---------NQAVHWTTPLGLPVVQPYCKTER 724
AV WTTPLGLPVVQPY K +
Sbjct: 928 VTSRAAKEFMSAVIWTTPLGLPVVQPYRKAHK 959
>M7TT85_BOTFU (tr|M7TT85) Putative mitochondrial dna-directed rna polymerase
protein OS=Botryotinia fuckeliana BcDW1 GN=BcDW1_4440
PE=4 SV=1
Length = 1399
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 258/715 (36%), Positives = 371/715 (51%), Gaps = 69/715 (9%)
Query: 63 EPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVI-VMHKMMSLVMENEEGCVQL 121
E LK EAE K H++ + P + LPA K+A + ++ M +L + + L
Sbjct: 413 EELKAIDEAEMKQHRSTEDISRCEYGPFLRYLPAEKLAALTIIAHMHALSSSGIDKGLTL 472
Query: 122 VQAAVQIGMALEQEVRIHKFLEGNKSLQS-KKTEADTEENLNNDKEKQ--RKFVNGLIKR 178
+ +QI ++E E I + ++ N + S + AD L K K +
Sbjct: 473 SFSILQIAKSVEDE-SIFETIQQNMAKPSWSDSVADRVRTLRILKAKAHGNSELTDNTNS 531
Query: 179 KKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN----QSADTPPDIRP 234
V Q WS +AK+GS L+E L++ A V PV ++ +T ++P
Sbjct: 532 TSFSPDAFVSSQIRAHEWSVGIKAKVGSFLLESLLKVAKV--PVTMVHPETNETVTQMQP 589
Query: 235 AFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKK-WKGYD 293
AF H Q G+K+ GVI + +++ L++ H + W G+
Sbjct: 590 AFSHA---QQYRMGRKL----GVINANKVIVEQLKREPVHSLLAKHLPMLVKPEPWTGFS 642
Query: 294 KGGHLFLPSYIMRT-HGSRKQQDVMKN-VKGEQMQKVFEALDILGNTKRRINGRLLDVVE 351
GG L P +MR +G Q++ + + VF+ L+ILG RIN + D++
Sbjct: 643 SGGFLKHPGRVMRVKNGDADQRNYADAAIDRGNLSTVFKGLNILGEQSWRINQPVFDIML 702
Query: 352 SIWAGGGNVAGLV-DCENVPLPDKPPTE-DLKQIQEWKYRVRKAKKMNLERHSQRCDTEL 409
W G +A L D + P +P T D + + W V+K + HSQRC
Sbjct: 703 EAWNSGDAIANLAPDKPKLDYPPEPETSSDPLERRRWVTAVKKVENSKSSFHSQRCFQNF 762
Query: 410 KLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRW 469
+L +AR ++D+ FY+PHN+DFRGRAYP+ P+LNH+G+D CRGL+ F G+ LG SGLRW
Sbjct: 763 QLEIARALRDK-TFYFPHNVDFRGRAYPIPPYLNHMGADHCRGLMMFGTGKALGNSGLRW 821
Query: 470 LKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACI 529
LK+HLAN+Y G +K S R F +I +I+DSA NP+ G RWWL+AEDP+QCLAAC+
Sbjct: 822 LKVHLANVY--GFDKASLQEREEFASKNIDEIYDSATNPLGGKRWWLQAEDPWQCLAACM 879
Query: 530 NLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEI 589
AL S P S +S+LP+HQDG+CNGLQHYAALG D A VNL ++PADVY+ +
Sbjct: 880 EFKNALESGDPASFVSYLPVHQDGTCNGLQHYAALGGDVWGAQQVNLEPGDRPADVYTAV 939
Query: 590 AVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKR 649
A D+++ KD AK+L +I RK+VKQTVMT+VYGVT+IGA+ Q++K+
Sbjct: 940 A----DLVKESIAKD--LLAGQPKAKILNGKITRKVVKQTVMTNVYGVTFIGAKAQVRKQ 993
Query: 650 L--EEKGLITDDRL-LFTAACYAAKVTLAALGEVFEAARGIMSWLGDCA----------- 695
L K L +D + T A Y AL +F+ A I WLGDCA
Sbjct: 994 LVAAHKDLPDNDEINPGTLASYVVTKIFTALSTMFKGAHDIQYWLGDCASRISNSLTPEQ 1053
Query: 696 --KVIAYENQ---------------------AVHWTTPLGLPVVQPYCKTERHLV 727
+++A ++ +V WTTPL LPVVQPY + LV
Sbjct: 1054 IERIVAQASEQEGRPSKRAALALDEISQFKSSVIWTTPLNLPVVQPYRTHKSRLV 1108
>G2YM53_BOTF4 (tr|G2YM53) DNA-directed RNA polymerase OS=Botryotinia fuckeliana
(strain T4) GN=BofuT4P0000045001 PE=3 SV=1
Length = 1399
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 258/715 (36%), Positives = 371/715 (51%), Gaps = 69/715 (9%)
Query: 63 EPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVI-VMHKMMSLVMENEEGCVQL 121
E LK EAE K H++ + P + LPA K+A + ++ M +L + + L
Sbjct: 413 EELKAIDEAEMKQHRSTEDISRCEYGPFLRYLPAEKLAALTIIAHMHALSSSGIDKGLTL 472
Query: 122 VQAAVQIGMALEQEVRIHKFLEGNKSLQS-KKTEADTEENLNNDKEKQ--RKFVNGLIKR 178
+ +QI ++E E I + ++ N + S + AD L K K +
Sbjct: 473 SFSILQIAKSVEDE-SIFETIQQNMAKPSWSDSVADRVRTLRILKAKAHGNSELTDNTNS 531
Query: 179 KKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN----QSADTPPDIRP 234
V Q WS +AK+GS L+E L++ A V PV ++ +T ++P
Sbjct: 532 TSFSPDAFVSSQIRAHEWSVGIKAKVGSFLLESLLKVAKV--PVTMVHPETNETVTQMQP 589
Query: 235 AFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKK-WKGYD 293
AF H Q G+K+ GVI + +++ L++ H + W G+
Sbjct: 590 AFSHA---QQYRMGRKL----GVINANKVIVEQLKREPVHSLLAKHLPMLVKPEPWTGFS 642
Query: 294 KGGHLFLPSYIMRT-HGSRKQQDVMKN-VKGEQMQKVFEALDILGNTKRRINGRLLDVVE 351
GG L P +MR +G Q++ + + VF+ L+ILG RIN + D++
Sbjct: 643 SGGFLKHPGRVMRVKNGDADQRNYADAAIDRGNLSTVFKGLNILGEQSWRINQPVFDIML 702
Query: 352 SIWAGGGNVAGLV-DCENVPLPDKPPTE-DLKQIQEWKYRVRKAKKMNLERHSQRCDTEL 409
W G +A L D + P +P T D + + W V+K + HSQRC
Sbjct: 703 EAWNSGDAIANLAPDKPKLDYPPEPETSSDPLERRRWVTAVKKVENSKSSFHSQRCFQNF 762
Query: 410 KLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRW 469
+L +AR ++D+ FY+PHN+DFRGRAYP+ P+LNH+G+D CRGL+ F G+ LG SGLRW
Sbjct: 763 QLEIARALRDK-TFYFPHNVDFRGRAYPIPPYLNHMGADHCRGLMMFGTGKALGNSGLRW 821
Query: 470 LKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACI 529
LK+HLAN+Y G +K S R F +I +I+DSA NP+ G RWWL+AEDP+QCLAAC+
Sbjct: 822 LKVHLANVY--GFDKASLQEREEFASKNIDEIYDSATNPLGGKRWWLQAEDPWQCLAACM 879
Query: 530 NLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEI 589
AL S P S +S+LP+HQDG+CNGLQHYAALG D A VNL ++PADVY+ +
Sbjct: 880 EFKNALESGDPASFVSYLPVHQDGTCNGLQHYAALGGDVWGAQQVNLEPGDRPADVYTAV 939
Query: 590 AVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKR 649
A D+++ KD AK+L +I RK+VKQTVMT+VYGVT+IGA+ Q++K+
Sbjct: 940 A----DLVKESIAKD--LLAGQPKAKILNGKITRKVVKQTVMTNVYGVTFIGAKAQVRKQ 993
Query: 650 L--EEKGLITDDRL-LFTAACYAAKVTLAALGEVFEAARGIMSWLGDCA----------- 695
L K L +D + T A Y AL +F+ A I WLGDCA
Sbjct: 994 LVAAHKDLPDNDEINPGTLASYVVTKIFTALSTMFKGAHDIQYWLGDCASRISNSLTPEQ 1053
Query: 696 --KVIAYENQ---------------------AVHWTTPLGLPVVQPYCKTERHLV 727
+++A ++ +V WTTPL LPVVQPY + LV
Sbjct: 1054 IERIVAQASEQEGRPSKRAALALDEISQFKSSVIWTTPLNLPVVQPYRTHKSRLV 1108
>L1K266_GUITH (tr|L1K266) DNA-directed RNA polymerase OS=Guillardia theta CCMP2712
GN=RpoTm PE=3 SV=1
Length = 1194
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 244/653 (37%), Positives = 367/653 (56%), Gaps = 64/653 (9%)
Query: 87 IAPNVDSLPAAKVAVIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRI-HKFLEGN 145
I P + SLPA+K+AVI +H+++S ++ V V+AA +G ++ E+ + H N
Sbjct: 456 IGPILMSLPASKIAVITIHELLSSLLSGGGQ-VHFVRAARTVGEGIQAELGLEHVKKAKN 514
Query: 146 KSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSP-WSRAAQAKL 204
+ L S + ++ L K +++++ +L + E P W Q K+
Sbjct: 515 RFLLSSRR------------------LSALCKAHDVRKLNKLLSRLESQPLWDARMQVKV 556
Query: 205 GSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLV 264
G++LI++L+ +A A H + Q + G ++ G + D +
Sbjct: 557 GAKLIQILMNSAKYKGSA------------AVTHVVQAQMSNKG---MRKKGFLALDQEI 601
Query: 265 LAGLEK----CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNV 320
L LEK A H W +D G ++ + +MR Q++ +N
Sbjct: 602 LQDLEKQHDSVAAHNPLLLPMIIRPFP-WMSFDVGCYIQARTKVMRIVDKGLQEESCRN- 659
Query: 321 KGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPP---- 376
+ +++ ALD+L T IN RLL+VV+ W + + ++ +P+ P
Sbjct: 660 --HDLSRIYAALDVLSGTGWCINRRLLNVVQHAWLDDMILGEIPQKDDFAVPELDPDCID 717
Query: 377 -TEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRA 435
E Q +E K + ++ N + HS RC +L VA M D F++PHNLDFRGRA
Sbjct: 718 AAESYSQYREKK----RVEQRNKDLHSLRCSLINQLHVATTMSDFKEFFFPHNLDFRGRA 773
Query: 436 YPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVE 495
YP+ PHLNHLGSD+CRGLL+F++ +PLGK G WLK+HLANL+ G K+SYD R+ + E
Sbjct: 774 YPIPPHLNHLGSDICRGLLKFSKKKPLGKKGFYWLKVHLANLF--GENKISYDDRVKWTE 831
Query: 496 NHIHDIFDSADNPVN--GNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDG 553
+ I SA NP++ ++WL A+DP+Q LA + + EA+ S P++ +S+LP+HQDG
Sbjct: 832 ERMSQILHSAKNPLDSASRKFWLSADDPWQALATSMEIQEAIESGDPSTYLSNLPVHQDG 891
Query: 554 SCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALL 613
SCNGLQHYAALG DE+ VNLV EKP+D Y+ + RV + + D +DPS+ + +
Sbjct: 892 SCNGLQHYAALGLDEIGGEQVNLVPGEKPSDPYTTVCNRVLEALDMDL-RDPSSADHE-V 949
Query: 614 AKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRL-EEKGLITDDRL----LFTAACY 668
+K++ ++ RK+VKQTVMT+VYGVT+IGAR+QI RL E G+ + L L+ A+ Y
Sbjct: 950 SKLVDKRVSRKVVKQTVMTTVYGVTFIGAREQIYNRLYEAYGIPGTNELQENDLYRASMY 1009
Query: 669 AAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCK 721
AK+TLA++G +F AR M WL AK++A Q V WTTPLGLPVVQPY K
Sbjct: 1010 LAKLTLASVGNIFVGARKTMEWLTSVAKIVASTGQPVRWTTPLGLPVVQPYYK 1062
>G0T0Q4_RHOG2 (tr|G0T0Q4) DNA-directed RNA polymerase OS=Rhodotorula glutinis
(strain ATCC 204091 / IIP 30 / MTCC 1151) GN=RTG_02653
PE=3 SV=1
Length = 1343
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 243/727 (33%), Positives = 382/727 (52%), Gaps = 71/727 (9%)
Query: 54 VKSLLLGWFEPLKEAVE--AEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLV 111
++ ++ W + L + +E A K S + + P + LP K+A+I + ++M +
Sbjct: 398 IQQIMFDWHKKLVKTLEDIAAGKRKDIDSGFRDRELEPFLQLLPVDKLALITIVEVMRMC 457
Query: 112 MENEEGC--VQLVQAAVQIGMALEQEVRIHKFLEG--NKSLQSKKTEADTEENLNND--- 164
++ + + +G A+E E + K LQ + + ++ +N D
Sbjct: 458 GSGTFAADGMKTTRVVLNVGRAVENEHHAEALRDSLSTKKLQEELAKVESRGTINPDGTV 517
Query: 165 KEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN- 223
+++ G++ R++L + W++ +A++GS L+ L+E A V +
Sbjct: 518 TPRRQTESLGILWRRELAKREEDGDSTWHPNWTQTIRARVGSVLVSALMEIAEVERTIKH 577
Query: 224 -QSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXX--XXX 280
++ + + +PAF H ++ G K+ G+I+ +P V L+K
Sbjct: 578 PKTGEQVSEKQPAFSHAYQYMR---GTKL----GIIKLNPAVSERLDKDPLDITLHPRFL 630
Query: 281 XXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQ-QDVMKNVKGEQMQKVFEALDILGNTK 339
K W ++ G +L + +MRT S +Q Q + + + +F LD LG
Sbjct: 631 PMLVKPKPWLTWNSGAYLLHQTPMMRTKESEEQVQYLQQASDNHTLDIIFSGLDTLGAVP 690
Query: 340 RRINGRLLDVVESIWAGGGNVAGL------VDCENVPLPDKPPTEDLKQIQEWKYRVRKA 393
+IN ++ D V +W G A + ++ + +P K D + ++ RVR+
Sbjct: 691 WKINRKVFDTVVQVWNSGDAFADIPAAAQKLEIPTLEIP-KGVMSDPRARDNYRRRVREL 749
Query: 394 KKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGL 453
+ HS RCD KL +AR E FY+PHNLDFRGRAYP+ P+L+H+G D+ RGL
Sbjct: 750 MQQKRAAHSMRCDLNYKLEIARAFLGE-TFYFPHNLDFRGRAYPIPPNLSHIGDDMSRGL 808
Query: 454 LEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNR 513
L FAE +PLG+ GLRWLKIH++NL G +K S+D R F H+ D+FDSADNP+ G +
Sbjct: 809 LLFAESKPLGERGLRWLKIHVSNLM--GFDKASFDEREAFTMEHLEDVFDSADNPLEGRK 866
Query: 514 WWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAA 573
WW +A+DP+QCLA CI L+ ALRS P LPIHQDG+CNGLQHYAALG D A
Sbjct: 867 WWTKADDPWQCLATCIELTNALRSEDPTKYECGLPIHQDGTCNGLQHYAALGGDINGARQ 926
Query: 574 VNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTS 633
VNL ++PADVYS +A V +I+ RD AK+L +I RK+VKQTVMT+
Sbjct: 927 VNLDIGDRPADVYSGVAQMVQEIITRDVEAGVEE------AKLLDGKITRKVVKQTVMTT 980
Query: 634 VYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGD 693
VYGVT+IGA++QI+++L+++G + +R L+ + Y ++ L ++G++F+ A I +WL
Sbjct: 981 VYGVTFIGAKNQIERQLKDRGDVPAER-LYKCSIYLGRLVLDSIGDLFKGAAAIQTWLNR 1039
Query: 694 CAKVIAY---------------------------------ENQAVHWTTPLGLPVVQPYC 720
CA++IA + +V WTTPLGLPV QPY
Sbjct: 1040 CARLIAKSIPPQRIEAALKQEKPGKNKSKKALALSRIPKEQMTSVVWTTPLGLPVCQPYR 1099
Query: 721 KTERHLV 727
+ ++ V
Sbjct: 1100 RPKKKQV 1106
>N1J6V7_ERYGR (tr|N1J6V7) Mitochondrial RNA polymerase OS=Blumeria graminis f. sp.
hordei DH14 GN=BGHDH14_bgh06417 PE=4 SV=1
Length = 1434
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 248/718 (34%), Positives = 366/718 (50%), Gaps = 98/718 (13%)
Query: 70 EAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGCVQLVQAAVQIG 129
+AE H+ RS + P + LPA+++A I + M+L+ ++ + L ++IG
Sbjct: 415 DAEDSEHKGRSDIDRCMYGPLLRILPASQLAAITIIACMTLMGQHTDKRTPLSTVVLEIG 474
Query: 130 MALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKK-------LK 182
+E E ++ + K EN+ + K+R +K K+ K
Sbjct: 475 KNIEDESTMYLLQKAQK------------ENMWPTELKRRLNPEFYVKLKRSRGAGAAAK 522
Query: 183 EVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN--QSADTPPDIRPAFRHGF 240
++ +E PW +AK+G+ L+ L+E A V + V ++ + ++ AF H
Sbjct: 523 HMNRYFAEEGAKPWPLPLKAKVGAVLMSHLMEVAKVSARVKHPETNEELVQVQSAFTHAH 582
Query: 241 KPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXX-KKWKGYDKGGHLF 299
+ K K G++ + +++ L++ H W+G++KGG++
Sbjct: 583 Q-------YKKGKKTGIVIMNKVLIEQLQREPVHSLLAKHLPMVVEPDDWRGFEKGGYIV 635
Query: 300 LPSYIMRT-HGSRKQQDVMKN-VKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGG 357
P+ IMR G +Q+ + + +M KV + L++LG T RIN ++ D++ W G
Sbjct: 636 YPARIMRIKQGDEEQRHYCEAAISQGEMSKVVQGLNVLGKTSWRINQQVFDIMLQAWNTG 695
Query: 358 GNVAGLVDCENVPLPDKPP----TEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSV 413
+A P D PP T D + W +V+ A+ + HSQRC +L +
Sbjct: 696 EAIANFPPLN--PKIDVPPEPVSTTDPLERGRWIRKVKIAQNIKTGMHSQRCFQNFQLEI 753
Query: 414 ARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIH 473
A+ +KD++ FY+PHN+DFRGRAYP+ P+LNH+G+D CRGLL F G+ LG+SGL+WLKIH
Sbjct: 754 AQALKDKE-FYFPHNVDFRGRAYPLPPYLNHIGADHCRGLLIFGRGKQLGESGLKWLKIH 812
Query: 474 LANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSE 533
++N+Y G +K S R F + + +I+DSA NP+NG +WWL AEDP+QCLAACI L
Sbjct: 813 ISNVY--GYDKASLQDRESFTSSKLEEIYDSALNPMNGKKWWLEAEDPWQCLAACIELKN 870
Query: 534 ALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRV 593
AL S P +SHLP+HQDG+CNGLQHYAALG D A VNL EKPADVYS +A
Sbjct: 871 ALESPDPTKFVSHLPVHQDGTCNGLQHYAALGGDTWGAKQVNLEPGEKPADVYSAVA--- 927
Query: 594 HDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEK 653
D++R D KD LA L +I RK VKQTVMT+VYGVT+IGA Q++K+L
Sbjct: 928 -DLVRIDIAKDKEA--GNPLAAALEGKITRKTVKQTVMTNVYGVTFIGASAQVRKQLAAS 984
Query: 654 GLI-------TDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIA------- 699
++ + A Y A+ AL +F A I WL +CA I
Sbjct: 985 QTTPSIDQPESESQNRHNDAAYVARKIFTALSTMFRGAHDIQYWLAECATRITTSLNAQQ 1044
Query: 700 -------YEN-------------------------------QAVHWTTPLGLPVVQPY 719
++N V WT+PLGLPVVQPY
Sbjct: 1045 ISRLEAEWDNLYKSHIESLESESNGKKSSRHSKIDDMLMFKSGVIWTSPLGLPVVQPY 1102
>C4JDA6_UNCRE (tr|C4JDA6) DNA-directed RNA polymerase OS=Uncinocarpus reesii
(strain UAMH 1704) GN=UREG_00348 PE=3 SV=1
Length = 1231
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 264/777 (33%), Positives = 397/777 (51%), Gaps = 94/777 (12%)
Query: 1 MRAEQEVREAETFDALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLG 60
+ AE E+ E L + I A E W P+ ++ +LL
Sbjct: 204 LEAEGEISSVEKQRRLEQDSIVAAMERWRKESEDRASKTGL------GPSEKKMGALLWD 257
Query: 61 WFEPLKEAVEAE-QKAHQARSKKQQA-------SIAPNVDSLPAAKV-AVIVMHKMMSLV 111
W + L ++++E Q A +A+ K+++ AP + ++ A K+ A+ ++ M +L
Sbjct: 258 WQQCLLTSIQSEMQSALRAQEKERKTPEDNDRCEYAPFLSTIGAEKLSAITILATMNALG 317
Query: 112 MENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKF 171
+ ++L + + +G A+++E + +++ D+ + + + K
Sbjct: 318 RSGMDKGIRLTRLIMVLGKAVQEEYLADRI---------RESAYDSAHTNSANSANRAKM 368
Query: 172 VNGLIKRKKLKEVHVVLKQ----EEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN---- 223
V LI K + ++++ E WS A +AK+G+ L +L + V PV
Sbjct: 369 VEKLIASKDHSKWRYLVRKYNESHEPVNWSAATEAKIGALLASMLFSSTKV--PVEHKNP 426
Query: 224 QSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQC-DPLVLAGLEKCAKHXXXXXXXX 282
++ + +PAFRH ++ + G I G +Q D +V + A H
Sbjct: 427 ETREVTVSKQPAFRHVYQLEK---GFSI----GYVQLHDSIVEKLGREPASHLLAKHLPM 479
Query: 283 XXXXKKWKGYDKGGHLFLPSYIMRTH--GSRKQQDVMKNVKGEQMQKVFEALDILGNTKR 340
W Y GG L PS ++R + + Q V + + ++F L++LG T
Sbjct: 480 VSPPAPWSSYHHGGFLEQPSLVIRARPDNALQLQYVKAASRRGDLDEIFAGLNVLGKTGW 539
Query: 341 RINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKPPTEDLKQIQEWKYRVRKA---KKM 396
+IN + DV+ W G +A + E N+P P+KP T D ++ + YR + K+
Sbjct: 540 QINRPVFDVMLEAWNSGKELADIPAAEPNLPEPEKPDTGDSGSLKAY-YRAKAVVDNKRS 598
Query: 397 NLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEF 456
HSQRC L+L VAR E FY PHN+DFRGRAYP+ P+ N +GSD+CRGLL F
Sbjct: 599 GF--HSQRCFQNLQLEVARAYIGE-TFYLPHNMDFRGRAYPLPPYFNQMGSDMCRGLLLF 655
Query: 457 AEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWL 516
+EGR LG+ GL+WLKIHLAN+Y G +K S+D R F +H+ D+ DSA+ ++G RWWL
Sbjct: 656 SEGRQLGERGLKWLKIHLANVY--GFDKASFDERAQFSMDHLDDVIDSAEKGLHGRRWWL 713
Query: 517 RAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNL 576
+A DPFQCLAACI L AL + P +SHLPIHQDGSCNGLQHYAALG D + A VNL
Sbjct: 714 QAADPFQCLAACIELKNALACADPTKFVSHLPIHQDGSCNGLQHYAALGGDIIGARQVNL 773
Query: 577 VAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYG 636
++P+D+YS +A VH + +D+ + L ++L D+I+RK+VKQTVMT+VYG
Sbjct: 774 EPSDRPSDIYSAVAEHVHQSIVQDAAS------GSQLGELLKDKINRKVVKQTVMTNVYG 827
Query: 637 VTYIGARDQIKKRLEE-KGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCA 695
VT++GA Q++K+L+E + ++ + A Y + AAL +F A I WLGDCA
Sbjct: 828 VTFLGAIRQVQKQLDEIYPDLAENNNVNKIATYITRKIFAALSSMFTGAHEIQFWLGDCA 887
Query: 696 K-------------VIAYEN--------------------QAVHWTTPLGLPVVQPY 719
VI N V WTTPL LPVVQPY
Sbjct: 888 NRITQSLSPDQIEAVIEARNAPATAAKKPKKKDDLSKRFRSTVIWTTPLKLPVVQPY 944
>Q0QFS1_9EUKA (tr|Q0QFS1) DNA-directed RNA polymerase (Fragment) OS=Stygamoeba
sp. ruffled GN=mtRNAP PE=3 SV=1
Length = 661
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/501 (43%), Positives = 294/501 (58%), Gaps = 28/501 (5%)
Query: 235 AFRHGFKPQSRSPGQKILKNYGVIQCDPLVL-----AGLEKCAKHXXXXXXXXXXXXKKW 289
AF+H + ++ + G I C P VL L + A H K W
Sbjct: 55 AFKHTYTYTTK-------RKVGAITCAPSVLQTIRDGHLAQEANHARMLPMVVPP--KPW 105
Query: 290 KGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDV 349
D GG+L + S +MR SR Q D++ G + V+ +LD L +IN R+L V
Sbjct: 106 TAPDVGGYLVVKSNVMRVRDSRLQWDMLSKT-GTDLSNVYRSLDELSAVPWKINKRVLRV 164
Query: 350 VESIWAGGGNVAGLVDCENVPLPDKPPT-EDLKQIQEWKY--RVRKAKKMNLERHSQRCD 406
+ +W GG + L ++PLP+ P +D+ + Y +R+ ++ N + HS RCD
Sbjct: 165 AQELWQRGGGIGDLPSRTDLPLPEAPDNYKDMDPAERSAYYRHLRRQQRANADLHSLRCD 224
Query: 407 TELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSG 466
T LKL VA + ++ D FY+PHN+DFRGR YP+ PHLNHLGSDLCRGLL F+EGR LG +G
Sbjct: 225 TTLKLGVAEQFQNLDRFYFPHNMDFRGRTYPIPPHLNHLGSDLCRGLLCFSEGRELGPNG 284
Query: 467 LRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLA 526
L WLK+ LANL+ G K S+ R F + ++ + +A +P WW A+DP+Q L+
Sbjct: 285 LGWLKVQLANLF--GNNKCSFADRQRFADENMARVLATAADPAT-ETWWHAADDPWQALS 341
Query: 527 ACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVY 586
C L++AL S P +S+LPIH DGSCNGLQHYAALG DE A VNL+ +P DVY
Sbjct: 342 TCYELTDALASPDPARHVSYLPIHMDGSCNGLQHYAALGGDEEGARKVNLLPAPQPDDVY 401
Query: 587 SEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQI 646
S +A V ++ D+ K S +A +L D+I R++VKQTVMTSVYGVTY+GAR QI
Sbjct: 402 SGVATIVSRLVEEDAQKGHS------IALLLRDRISRRIVKQTVMTSVYGVTYVGARAQI 455
Query: 647 KKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVH 706
+ L L+ DD + A+ Y A TL A+ E+F AR IM+WL CA +IA + V
Sbjct: 456 QNALSSTDLLDDD-AAWQASRYLAAHTLEAVREMFVGAREIMAWLATCAGLIAQSGEPVM 514
Query: 707 WTTPLGLPVVQPYCKTERHLV 727
WTTPLGLPVVQPY + + V
Sbjct: 515 WTTPLGLPVVQPYRRPGKQFV 535
>M9LQH4_9BASI (tr|M9LQH4) Mitochondrial/chloroplast DNA-directed RNA polymerase
RPO41 OS=Pseudozyma antarctica T-34 GN=PANT_12c00137 PE=4
SV=1
Length = 1509
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 251/700 (35%), Positives = 376/700 (53%), Gaps = 91/700 (13%)
Query: 89 PNVDSLPAAKVAVIVMHKMMSLVMENEEGC---VQLVQAAVQIGMALEQEVRIHKFLEGN 145
P + LP +K+A+I + ++M M G ++ +A +Q+G A+E E +
Sbjct: 594 PFLRLLPVSKLALITVLELMR--MSGNGGVSDGMKTTRALLQVGRAIETEYHSEVIRKNP 651
Query: 146 KSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEE-------VSPWSR 198
K Q+ + K+R V+ R+++KE KQ+E + W++
Sbjct: 652 KIFQNAQAAQAAL--------KKRGLVD-FAARREIKEWQ---KQQEEQGVISSIPKWTQ 699
Query: 199 AAQAKLGSRLIELLIETAYVH-SPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGV 257
+A++GS L++ L++ A V+ ++ + +PAF ++ G+K+ GV
Sbjct: 700 ITRARVGSYLVQHLMQVATVNRKATDRDGILWEEDQPAFYSTYQYLG---GKKL----GV 752
Query: 258 IQCDPLVLAGLEK--CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQD 315
I+ + +V L+K ++ K W +D GG+ + MR S +Q
Sbjct: 753 IKLNEVVAKRLDKDSISETLHPRHLPMLVPPKPWTSHDSGGYYSVRQSAMRFKDSAEQGS 812
Query: 316 VMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPD 373
++ + V ALD+LGNT +IN + DV+ +W G ++A + E P P
Sbjct: 813 YLRAASDNGDLDTVLAALDVLGNTSWKINKPIFDVMLEVWNSGKDIADMPPMEMETPEPV 872
Query: 374 KPPT--EDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDF 431
KP D+K + R+++ + HSQRCD KL +AR E FY+PHN+DF
Sbjct: 873 KPDNYDHDIKARSVYLQRLKQWNQQRSSNHSQRCDVNYKLEIARAYLGER-FYFPHNMDF 931
Query: 432 RGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRL 491
RGRAYPM PHLNH+G+DLCRGLL FA+ +PLGK+GLRWL+IH++N++ G +K S+ R
Sbjct: 932 RGRAYPMPPHLNHIGNDLCRGLLMFADSKPLGKAGLRWLRIHISNVF--GYDKASFGERE 989
Query: 492 GFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEAL-RSSSPNSVISHLPIH 550
F +H DI DS + P++GNRWWL+A+DP+QCLAAC+ L AL P + S LP+H
Sbjct: 990 QFAIDHEADIRDSVERPLDGNRWWLKADDPWQCLAACMELRAALDHPEGPEAYESCLPVH 1049
Query: 551 QDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPN 610
QDG+CNGLQHYAALG D A VNL ++PADVYS +A V ++ ++ K T
Sbjct: 1050 QDGTCNGLQHYAALGGDLAGAKQVNLSGGDRPADVYSGVADLVIKVLDEEAAKGDRT--- 1106
Query: 611 ALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAA 670
AK+L ++ RK+VKQTVMT+VYGVT+IGA++Q+ ++L ++G + + LF AA + A
Sbjct: 1107 ---AKILQGKVTRKVVKQTVMTTVYGVTFIGAKNQVMRQLADRGDVPAED-LFNAASFLA 1162
Query: 671 KVTLAALGEVFEAARGIMSWLGDCAKVIA---------------YENQA----------- 704
KV ++ +G +F A+ I WL AKVIA N+A
Sbjct: 1163 KVIMSCIGNLFSGAQKIQDWLSFSAKVIAKSIPGQRVEEATRPYLPNEANLRRADVRGFS 1222
Query: 705 ----------------VHWTTPLGLPVVQPYCKTERHLVS 728
V WTT LGLPVVQPY K ++ VS
Sbjct: 1223 RDPAKADRIAKEQMTSVIWTTALGLPVVQPYRKAKKRQVS 1262
>M7NPE9_9ASCO (tr|M7NPE9) Uncharacterized protein OS=Pneumocystis murina B123
GN=PNEG_02746 PE=4 SV=1
Length = 1259
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 250/700 (35%), Positives = 367/700 (52%), Gaps = 66/700 (9%)
Query: 57 LLLGWFE---PL-KEAVEAEQKAHQARSKKQQA--------SIAPNVDSLPAAKVAVIVM 104
LL W PL KE +E + A S K+ + S P + L K+ I +
Sbjct: 355 LLFEWHSLMIPLIKEEIERCKNAINNLSNKRNSNNTETDRLSYGPFIQLLSPEKLGTITI 414
Query: 105 HKMMSLVMENEEGCVQ---LVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENL 161
+++ L + G Q +A + +G ++E+E + L+ NK++ K NL
Sbjct: 415 LEILRL--HSTGGIAQGMRTARAILSVGKSIEKEYA-SELLKKNKNILGKDI------NL 465
Query: 162 NNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSP 221
+ R+F + L K + + K W +AK+GS L+ +L+ A +
Sbjct: 466 SQIFGNPRQFQSALYKTQNNVNFEIYPK------WPVTVKAKIGSILVSILMHVAKIDVI 519
Query: 222 VNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLA--GLEKCAKHXXXXX 279
+ PAF H ++ Q G+K+ GVI+ + ++ G + +
Sbjct: 520 TETENENISQKTPAFYHTYQYQK---GRKL----GVIKLNDQLMKQLGSQPLRGNIHPRL 572
Query: 280 XXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNV-KGEQMQKVFEALDILGNT 338
K W +D GG+ S +MR+ S +Q + +K + ++ +FE LD+LG+T
Sbjct: 573 LPMLVEPKPWISWDSGGYYLSKSIVMRSRDSPEQINYLKTASERNNLKSIFEGLDVLGST 632
Query: 339 KRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKPPTEDLKQIQEWKYRVRKAKKMN 397
IN + DVV +W G A + ++ P +P ++D + W+ ++ +
Sbjct: 633 AWAINRPVFDVVSEVWNSGQEFAEIPPVNSDITFPPQPTSKDPGERISWQVLCKQIARDA 692
Query: 398 LERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFA 457
+ S RCD KL +AR E Y+PHNLDFRGRAYP+ PH NHLG+DLCRGLL F
Sbjct: 693 QNKQSIRCDINYKLEIARAFLHEK-MYFPHNLDFRGRAYPIPPHFNHLGNDLCRGLLTFH 751
Query: 458 EGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLR 517
E + +G+SGLRWLKIHLAN+ G +K S+ R F ++ +IFDSADNP+ G+RWWL
Sbjct: 752 EAKEIGESGLRWLKIHLANV--CGFDKESFIEREAFTTENLKNIFDSADNPLKGSRWWLT 809
Query: 518 AEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLV 577
+DP+Q LAAC L+ ALRS P S LP+HQDG+CNGLQHYAALG D L A VNL
Sbjct: 810 FDDPWQTLAACFELTAALRSPDPYKFKSRLPVHQDGTCNGLQHYAALGGDILGARQVNLE 869
Query: 578 AKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGV 637
+P DVY+++A V++ +++D+ + LA +L +I RK+VKQTVMT+VYGV
Sbjct: 870 PSNRPYDVYTKVAELVNEQLQKDAKEGNH------LAVLLQGKITRKIVKQTVMTNVYGV 923
Query: 638 TYIGARDQIKKRLEEKGLITD--DRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCA 695
TY+GAR+QI +L+ I D +LF A Y AK +L +F A I WL + A
Sbjct: 924 TYVGARNQILNQLKN---INDLPREMLFNLASYLAKTVFFSLKSMFTGAHKIQEWLNEAA 980
Query: 696 KVIAYE-----------NQAVHWTTPLGLPVVQPYCKTER 724
K I+ +V WT+PL LP+VQPY K R
Sbjct: 981 KRISKSINTSLSDDINLMTSVIWTSPLNLPIVQPYRKLSR 1020
>M7X8Y2_RHOTO (tr|M7X8Y2) Mitochondrial RNA polymerase OS=Rhodosporidium toruloides
NP11 GN=RHTO_03678 PE=4 SV=1
Length = 1343
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 243/728 (33%), Positives = 385/728 (52%), Gaps = 73/728 (10%)
Query: 54 VKSLLLGWFEPLKEAVE--AEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLV 111
++ ++ W + L + +E A K S + + P + LP K+A+I + ++M +
Sbjct: 398 IQQIMFDWHKKLVKTLEDIAAGKRKDIDSGFRDQELEPFLHLLPIDKLALITIVEVMRMC 457
Query: 112 MENEEGC--VQLVQAAVQIGMALEQEVRIHKFLEGN---KSLQSKKTEADTEENLNND-- 164
++ + + +G A+E E L G+ K LQ + + ++ +N D
Sbjct: 458 GSGNFAADGMKTTRVVLNVGRAVENEHHAES-LRGSLSTKKLQEELAKIESRGTVNPDGT 516
Query: 165 -KEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN 223
+++ G++ R++L + W++ +A++GS L+ L+E A V +
Sbjct: 517 VTPRRQTESLGILWRRELAKREEDGDSTWHPNWTQTIRARVGSVLVSALMEIAEVERTIK 576
Query: 224 --QSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXX--XX 279
++ + + +PAF H ++ G K+ G+I+ +P V L+K
Sbjct: 577 HPKTGEQVTEKQPAFSHAYQYMR---GTKL----GIIKLNPAVSERLDKDPLDITLHPRF 629
Query: 280 XXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQ-QDVMKNVKGEQMQKVFEALDILGNT 338
K W ++ G +L + +MRT S +Q Q + + + +F LD LG
Sbjct: 630 LPMLVKPKPWLTWNSGAYLIHQTPMMRTKESEEQVQYLQQASDNHTLDIIFSGLDTLGAV 689
Query: 339 KRRINGRLLDVVESIWAGGGNVAGL------VDCENVPLPDKPPTEDLKQIQEWKYRVRK 392
+IN ++ D+V +W G A + ++ + +P K D + ++ RVR+
Sbjct: 690 PWKINRKVFDIVVKVWNSGDAFADIPAAAQKLEIPTLEIP-KGVMSDPRARDNYRRRVRE 748
Query: 393 AKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRG 452
+ HS RCD KL +AR E FY+PHNLDFRGRAYP+ P+L+H+G D+ RG
Sbjct: 749 LMQQKRAAHSMRCDLNYKLEIARAFLGE-TFYFPHNLDFRGRAYPIPPNLSHIGDDMSRG 807
Query: 453 LLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGN 512
LL FAE +PLG+ GLRWLKIH++NL G +K S+D R F H+ D+FDSADNP+ G
Sbjct: 808 LLLFAESKPLGERGLRWLKIHVSNLM--GFDKASFDEREAFTMEHLEDVFDSADNPLEGR 865
Query: 513 RWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAA 572
+WW +A+DP+QCLA CI ++ ALRS P LP+HQDG+CNGLQHYAALG D A
Sbjct: 866 KWWTKADDPWQCLATCIEVTNALRSEDPTKYECGLPVHQDGTCNGLQHYAALGGDINGAR 925
Query: 573 AVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMT 632
VNL ++PADVYS +A V +I+ RD AK+L +I RK+VKQTVMT
Sbjct: 926 QVNLDIGDRPADVYSGVAQMVQEIITRDMEAGIEE------AKLLDGKITRKVVKQTVMT 979
Query: 633 SVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLG 692
+VYGVT+IGA++QI+++L+++G + +R L+ + Y ++ L ++G++F+ A I +WL
Sbjct: 980 TVYGVTFIGAKNQIERQLKDRGDVPPER-LYRCSIYLGRLVLDSIGDLFKGAAAIQTWLN 1038
Query: 693 DCAKVIAY---------------------------------ENQAVHWTTPLGLPVVQPY 719
CA++IA + +V WTTPLGLPV QPY
Sbjct: 1039 RCARLIAKSIPPQRIEAALQQEKPGKNKTKKALALSRIPKEQMTSVVWTTPLGLPVCQPY 1098
Query: 720 CKTERHLV 727
+ ++ V
Sbjct: 1099 RRPKKKQV 1106
>D0NEZ4_PHYIT (tr|D0NEZ4) DNA-directed RNA polymerase OS=Phytophthora infestans
(strain T30-4) GN=PITG_10289 PE=3 SV=1
Length = 1070
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 262/767 (34%), Positives = 380/767 (49%), Gaps = 133/767 (17%)
Query: 55 KSLLLGWFEPLKEAVEAEQKAHQARSKKQQASI-APNVDSLPAAKVAVIVMHKMMSLVME 113
K L+ W ++ +E+EQK ++ + ++I P + L +A I M+ M+++ +
Sbjct: 201 KDLITKWMPQAQKYIESEQKKIKSGTHSTDSNIYGPALMLLRHDILAAIGMNIMLNMCLM 260
Query: 114 NEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVN 173
+G + ++ A+ +G A+++E+ SKK E ++ + KF
Sbjct: 261 ESKG-PKFIKLALAMGKAVQEEI------------ISKK------ETISKRYQDDDKFYL 301
Query: 174 GLIKRKKLKEVHVVLKQ--EEVSPWSRAAQAKLGSRLIELLIETAYV-------HSPVNQ 224
+ K KL+ + + +K+ + V W + Q K+G+ +++ + T YV +P
Sbjct: 302 QVSKNIKLESLKMRMKEYVDSVGGWDKRLQLKVGAAVVDCIQRTCYVPNEYGEVSTPELC 361
Query: 225 SADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQ-----CDPLVLAGLEKCAKHXXXXX 279
+A P PAF H + + GVIQ D ++ +
Sbjct: 362 AAKGLPPPEPAFIHNYVFDRN-------RRAGVIQIHQRMADTVLATNPDANVLPWTARY 414
Query: 280 XXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTK 339
+ W GG+L L + IMR S Q D ++ +GE M + +AL+++
Sbjct: 415 LPMLVPPRPWTSVINGGYLKLRTKIMRQRDSAWQMDCVQ--RGE-MDGILKALNLMAEVP 471
Query: 340 RRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRK------- 392
IN +LDVV IW GGN L +VPLPD E + VRK
Sbjct: 472 WVINKEVLDVVLQIWEDGGNFGDLPTRTDVPLPDPDSPEFADDPALYHKNVRKNQAHMMT 531
Query: 393 ---------------------------------------AKKMNLERHSQRCDTELKLSV 413
+++N E HS RCDT KL V
Sbjct: 532 ISTSCGFKLIATVSGHCLEVVGWIFLSLEPSERLLRWSLIEQLNREFHSLRCDTLYKLQV 591
Query: 414 ARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIH 473
A + KDE YYP+N+DFRGR YP+ P+LNHLGSDL R LL F + +PLG+ GLRW+KIH
Sbjct: 592 AEEFKDEPELYYPYNMDFRGRVYPIPPNLNHLGSDLSRSLLIFRDRKPLGERGLRWMKIH 651
Query: 474 LANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGN--RWWLRAEDPFQCLAACINL 531
LAN++ G++K S+D R+ F + H+ + SA +P+ WW A+ PF L C L
Sbjct: 652 LANVF--GVDKCSFDERVEFADAHLDKVVASASDPLGEGDCAWWKGADYPFLALGVCFEL 709
Query: 532 SEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAV 591
A+ S P +S++PIHQDGSCNGLQHYAALGRD A VNLV ++P+DVY +A
Sbjct: 710 KRAIESPDPTQYMSNIPIHQDGSCNGLQHYAALGRDHSGGAQVNLVPADRPSDVYMGVAT 769
Query: 592 RVHDIMRRDSNKDPSTFPN--ALLAKV-----------------LIDQ------------ 620
+V + RD+ + T A+LA V L+DQ
Sbjct: 770 QVMAKVERDAALEVPTVEEVRAMLAAVPDDESTESLSRRTKFRTLLDQAHRKKYAQFLDG 829
Query: 621 -IDRKLVKQTVMTSVYGVTYIGARDQIKKRLEE----KGLITDDRL---LFTAACYAAKV 672
I RK+VKQTVMTSVYGVTYIGAR QI RL E KG I DD+L ++ A+CY A++
Sbjct: 830 IITRKVVKQTVMTSVYGVTYIGARKQISARLHETFLTKGHIMDDKLEDNIYHASCYCAEL 889
Query: 673 TLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPY 719
T+ ++G++F +ARGIM WL CA + Q + W TPLGLPVVQPY
Sbjct: 890 TMGSMGDLFTSARGIMGWLARCAGKVGESGQPMSWITPLGLPVVQPY 936
>E9D5Y0_COCPS (tr|E9D5Y0) DNA-directed RNA polymerase OS=Coccidioides posadasii
(strain RMSCC 757 / Silveira) GN=CPSG_05010 PE=3 SV=1
Length = 1385
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 264/741 (35%), Positives = 381/741 (51%), Gaps = 94/741 (12%)
Query: 53 RVKSLLLGWFEPLKEAVEAE-QKAHQARSKKQQAS-------IAPNVDSL-PAAKVAVIV 103
++ +L W + L ++E E Q +A+ KK++ S AP ++S+ P A+ +
Sbjct: 401 KLGGVLWDWHQSLLTSIEGEIQSILKAQEKKRKTSEDNDRCEYAPFMNSIGPDRLAAITI 460
Query: 104 MHKMMSLVMENEEGCVQLVQAAVQIGMALEQEV---RIHKFLEGNKSLQSKKTEADTEEN 160
+ M +L ++L + + +G A+++E RI + + L S + A ++
Sbjct: 461 LATMNALGKTGMNKGIRLTRLIMLLGRAVQEEYVTDRIQETPSKSAPLDSGR-RAKLVQD 519
Query: 161 LNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHS 220
L ++ LI+ K E+H +K WS A +AK+GS L +L + V
Sbjct: 520 LIPSNRGRKGVRESLIE--KYNEIHEPIK------WSAAVEAKIGSLLASMLFSSTKVV- 570
Query: 221 PVNQSADTPPDI----RPAFRHGFKPQSRSPGQKILKNYGVIQC-DPLVLAGLEKCAKHX 275
V Q +I +PAFRH ++ + G + G + D +V + A
Sbjct: 571 -VKQQNTETGEITFVKQPAFRHVYQLEK---GHSV----GFVHIHDSVVDRFRREPASSL 622
Query: 276 XXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQ----QDVMKNVKGEQMQKVFEA 331
+ W Y GG L P+ IMR + Q Q V + ++F
Sbjct: 623 LAKHLPMVSPPQPWTSYRYGGFLNQPTIIMRARSNDSQCLQRQYVRAAASRGDLDEIFAG 682
Query: 332 LDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKPPTEDLKQIQEWKYRV 390
L++LG T RIN + DV+ W G +A + + N+P P KP T+D Q++ + YR
Sbjct: 683 LNVLGKTGWRINKPVFDVMLEAWNSGDELADIAPVDPNLPEPTKPETDDPVQLRAY-YRS 741
Query: 391 RKA---KKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGS 447
+ K+ L HSQRC L+L +AR E FY PHN+DFRGRAYP+ P+ N +G
Sbjct: 742 KTLVDNKRSGL--HSQRCFQNLQLEIARAYVGE-TFYLPHNMDFRGRAYPLPPYFNQMGP 798
Query: 448 DLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADN 507
D+CRGLL F++GR LG+ GLRWLKIH+AN+Y G +K S+D R F +H+ D+ DSA+
Sbjct: 799 DMCRGLLLFSKGRELGERGLRWLKIHIANVY--GYDKASFDERAQFAMDHLDDVIDSAEK 856
Query: 508 PVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRD 567
+NG RWWL A DPFQCLAACI L AL P ISHLPIHQDGSCNGLQHYAALG D
Sbjct: 857 GLNGRRWWLEASDPFQCLAACIELKNALACPDPTKYISHLPIHQDGSCNGLQHYAALGGD 916
Query: 568 ELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVK 627
+ A VNL ++P+D+YS +A V + +++ LAK+L D+++RK+VK
Sbjct: 917 IIGARQVNLEPSDRPSDIYSAVADHVRQSIAQEAAA------GNQLAKILEDKVNRKIVK 970
Query: 628 QTVMTSVYGVTYIGARDQIKKRLEE-KGLITDDRLLFTAACYAAKVTLAALGEVFEAARG 686
QTVMT+VYGVT++GA Q++K+L +++ ++ A Y + AAL +F A
Sbjct: 971 QTVMTNVYGVTFLGAIRQVQKQLNAFFPELSERNVVGKCATYITRKIFAALSSMFTGAHE 1030
Query: 687 IMSWLGDCAKVI----------AYEN--------------------------QAVHWTTP 710
I WLGDCA I A E V WTTP
Sbjct: 1031 IQFWLGDCANRITQSLGPEQIEALEAARQVPISGTSKAKKKAIIDDLSKRFLSTVIWTTP 1090
Query: 711 LGLPVVQPY--CKTERHLVSL 729
L LPVVQPY KT R + +L
Sbjct: 1091 LKLPVVQPYREAKTRRVVTTL 1111
>C5PEM0_COCP7 (tr|C5PEM0) DNA-directed RNA polymerase OS=Coccidioides posadasii
(strain C735) GN=CPC735_059100 PE=3 SV=1
Length = 1385
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 264/741 (35%), Positives = 381/741 (51%), Gaps = 94/741 (12%)
Query: 53 RVKSLLLGWFEPLKEAVEAE-QKAHQARSKKQQAS-------IAPNVDSL-PAAKVAVIV 103
++ +L W + L ++E E Q +A+ KK++ S AP ++S+ P A+ +
Sbjct: 401 KLGGVLWDWHQSLLTSIEGEIQSILKAQEKKRKTSEDNDRCEYAPFMNSIGPDRLAAITI 460
Query: 104 MHKMMSLVMENEEGCVQLVQAAVQIGMALEQEV---RIHKFLEGNKSLQSKKTEADTEEN 160
+ M +L ++L + + +G A+++E RI + + L S + A ++
Sbjct: 461 LATMNALGKTGMNKGIRLTRLIMLLGRAVQEEYVTDRIQETPSKSAPLDSGR-RAKLVQD 519
Query: 161 LNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHS 220
L ++ LI+ K E+H +K WS A +AK+GS L +L + V
Sbjct: 520 LIPSNRGRKGVRESLIE--KYNEIHEPIK------WSAAVEAKIGSLLASMLFSSTKVV- 570
Query: 221 PVNQSADTPPDI----RPAFRHGFKPQSRSPGQKILKNYGVIQC-DPLVLAGLEKCAKHX 275
V Q +I +PAFRH ++ + G + G + D +V + A
Sbjct: 571 -VKQQNTETGEITFVKQPAFRHVYQLEK---GHSV----GFVHIHDSVVDRFRREPASSL 622
Query: 276 XXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQ----QDVMKNVKGEQMQKVFEA 331
+ W Y GG L P+ IMR + Q Q V + ++F
Sbjct: 623 LAKHLPMVSPPQPWTSYRYGGFLNQPTIIMRARSNDSQCLQRQYVRAAASRGDLDEIFAG 682
Query: 332 LDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKPPTEDLKQIQEWKYRV 390
L++LG T RIN + DV+ W G +A + + N+P P KP T+D Q++ + YR
Sbjct: 683 LNVLGKTGWRINKPVFDVMLEAWNSGDELADIAPVDPNLPEPTKPETDDPVQLRAY-YRS 741
Query: 391 RKA---KKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGS 447
+ K+ L HSQRC L+L +AR E FY PHN+DFRGRAYP+ P+ N +G
Sbjct: 742 KTLVDNKRSGL--HSQRCFQNLQLEIARAYVGE-TFYLPHNMDFRGRAYPLPPYFNQMGP 798
Query: 448 DLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADN 507
D+CRGLL F++GR LG+ GLRWLKIH+AN+Y G +K S+D R F +H+ D+ DSA+
Sbjct: 799 DMCRGLLLFSKGRELGERGLRWLKIHIANVY--GYDKASFDERAQFAMDHLDDVIDSAEK 856
Query: 508 PVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRD 567
+NG RWWL A DPFQCLAACI L AL P ISHLPIHQDGSCNGLQHYAALG D
Sbjct: 857 GLNGRRWWLEASDPFQCLAACIELKNALACPDPTKYISHLPIHQDGSCNGLQHYAALGGD 916
Query: 568 ELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVK 627
+ A VNL ++P+D+YS +A V + +++ LAK+L D+++RK+VK
Sbjct: 917 IIGARQVNLEPSDRPSDIYSAVADHVRQSIAQEAAA------GNQLAKILEDKVNRKIVK 970
Query: 628 QTVMTSVYGVTYIGARDQIKKRLEE-KGLITDDRLLFTAACYAAKVTLAALGEVFEAARG 686
QTVMT+VYGVT++GA Q++K+L +++ ++ A Y + AAL +F A
Sbjct: 971 QTVMTNVYGVTFLGAIRQVQKQLNAFFPELSERNVVGKCATYITRKIFAALSSMFTGAHE 1030
Query: 687 IMSWLGDCAKVI----------AYEN--------------------------QAVHWTTP 710
I WLGDCA I A E V WTTP
Sbjct: 1031 IQFWLGDCANRITQSLGPEQIEALEAARQVPISGTSKAKKKAIIDDLSKRFLSTVIWTTP 1090
Query: 711 LGLPVVQPY--CKTERHLVSL 729
L LPVVQPY KT R + +L
Sbjct: 1091 LKLPVVQPYREAKTRRVVTTL 1111
>J3KGM2_COCIM (tr|J3KGM2) DNA-directed RNA polymerase OS=Coccidioides immitis
(strain RS) GN=CIMG_00271 PE=3 SV=1
Length = 1385
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 264/741 (35%), Positives = 381/741 (51%), Gaps = 94/741 (12%)
Query: 53 RVKSLLLGWFEPLKEAVEAE-QKAHQARSKKQQAS-------IAPNVDSL-PAAKVAVIV 103
++ +L W + L ++E E Q +A+ KK++ S AP ++S+ P A+ +
Sbjct: 401 KLGGVLWDWHQSLLTSIEGEIQSILKAQEKKRKTSEDNDRCEYAPFMNSIGPDRLAAITI 460
Query: 104 MHKMMSLVMENEEGCVQLVQAAVQIGMALEQEV---RIHKFLEGNKSLQSKKTEADTEEN 160
+ M +L ++L + + +G A+++E RI + + L S + A ++
Sbjct: 461 LATMNALGKTGMNKGIRLTRLIMLLGRAVQEEYVTDRIQETPSKSAPLDSGR-RAKLVQD 519
Query: 161 LNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHS 220
L ++ LI+ K E+H +K WS A +AK+GS L +L + V
Sbjct: 520 LIPSNRGRKGVRESLIE--KYNEIHEPIK------WSAAVEAKIGSLLASMLFSSTKVV- 570
Query: 221 PVNQSADTPPDI----RPAFRHGFKPQSRSPGQKILKNYGVIQC-DPLVLAGLEKCAKHX 275
V Q +I +PAFRH ++ + G + G + D +V + A
Sbjct: 571 -VKQQNTETGEITFVKQPAFRHVYQLEK---GHSV----GFVHIHDSVVDRFRREPASSL 622
Query: 276 XXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQ----QDVMKNVKGEQMQKVFEA 331
+ W Y GG L P+ IMR + Q Q V + ++F
Sbjct: 623 LAKHLPMVSPPQPWTSYRYGGFLNQPTIIMRARSNDSQCLQRQYVRAAASRGDLDEIFAG 682
Query: 332 LDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKPPTEDLKQIQEWKYRV 390
L++LG T RIN + DV+ W G +A + + N+P P KP T+D Q++ + YR
Sbjct: 683 LNVLGKTGWRINKPVFDVMLEAWNSGDELADIAPVDPNLPEPTKPETDDPVQLRAY-YRS 741
Query: 391 RKA---KKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGS 447
+ K+ L HSQRC L+L +AR E FY PHN+DFRGRAYP+ P+ N +G
Sbjct: 742 KTLVDNKRSGL--HSQRCFQNLQLEIARAYVGE-TFYLPHNMDFRGRAYPLPPYFNQMGP 798
Query: 448 DLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADN 507
D+CRGLL F++GR LG+ GLRWLKIH+AN+Y G +K S+D R F +H+ D+ DSA+
Sbjct: 799 DMCRGLLLFSKGRELGERGLRWLKIHIANVY--GYDKASFDERAQFAMDHLDDVIDSAEK 856
Query: 508 PVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRD 567
+NG RWWL A DPFQCLAACI L AL P ISHLPIHQDGSCNGLQHYAALG D
Sbjct: 857 GLNGRRWWLEASDPFQCLAACIELKNALACPDPTKYISHLPIHQDGSCNGLQHYAALGGD 916
Query: 568 ELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVK 627
+ A VNL ++P+D+YS +A V + +++ LAK+L D+++RK+VK
Sbjct: 917 IIGARQVNLEPSDRPSDIYSAVADHVRQSIAQEAAA------GNQLAKILEDKVNRKIVK 970
Query: 628 QTVMTSVYGVTYIGARDQIKKRLEE-KGLITDDRLLFTAACYAAKVTLAALGEVFEAARG 686
QTVMT+VYGVT++GA Q++K+L +++ ++ A Y + AAL +F A
Sbjct: 971 QTVMTNVYGVTFLGAIRQVQKQLNAFFPELSERNVVGKCATYITRKIFAALSSMFTGAHE 1030
Query: 687 IMSWLGDCAKVI----------AYEN--------------------------QAVHWTTP 710
I WLGDCA I A E V WTTP
Sbjct: 1031 IQFWLGDCANRITQSLGPEQIEALEAARHVPISGTSKAKKKAIIDDLSKRFLSTVIWTTP 1090
Query: 711 LGLPVVQPY--CKTERHLVSL 729
L LPVVQPY KT R + +L
Sbjct: 1091 LKLPVVQPYREAKTRRVVTTL 1111
>R9PAX2_9BASI (tr|R9PAX2) Uncharacterized protein OS=Pseudozyma hubeiensis SY62
GN=PHSY_006120 PE=4 SV=1
Length = 1544
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 250/702 (35%), Positives = 371/702 (52%), Gaps = 91/702 (12%)
Query: 87 IAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC---VQLVQAAVQIGMALEQEVRIHKFLE 143
I P + LPA+K+A+I + ++M M G ++ +A +Q+G A+E E +
Sbjct: 610 ILPFLRLLPASKLALITILELMR--MSGNGGVSDGMKTTRALLQVGRAIEMEYHSEVVRK 667
Query: 144 GNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEE-------VSPW 196
K Q+ T T RK GLI +E+ KQ+E + W
Sbjct: 668 NPKIFQNAHTAQTT----------LRK--RGLIDLAARREIKAWQKQQEDEGVLSSIPRW 715
Query: 197 SRAAQAKLGSRLIELLIETAYVH-SPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNY 255
++ +A++GS L++ L+ A V+ ++ + +PAF ++ G+K+
Sbjct: 716 TQTIRARVGSYLVQHLMHVATVNRKATDRDGVLWEEDQPAFYSTYQYLG---GKKL---- 768
Query: 256 GVIQCDPLVLAGLEKCAKHXXXXXXXXXXXX--KKWKGYDKGGHLFLPSYIMRTHGSRKQ 313
GVI+ + ++ L+K + K W +D GG+ + MR S +Q
Sbjct: 769 GVIKLNEVIAKRLDKDSIQETLHPRHLPMLVPPKPWTSHDSGGYYSVRQSAMRFKDSAEQ 828
Query: 314 QDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPL 371
++ + V ALD+LGNT +IN + DV+ +W G ++A + +
Sbjct: 829 GSYLRAASDNGDLDTVLAALDVLGNTSWKINKPIFDVMTEVWNSGKDIADMPPVQMEAQE 888
Query: 372 PDKPPT--EDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNL 429
P KP D+K + R+++ + HSQRCD KL +AR E FY+PHN+
Sbjct: 889 PQKPDNYDHDIKARSVYLQRLKQWNQQRASNHSQRCDVNYKLEIARAYLGER-FYFPHNM 947
Query: 430 DFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDG 489
DFRGRAYPM PHLNH+G+DLCRGLL FA+ +PLGK+GLRWL+IH++N++ G +K S+
Sbjct: 948 DFRGRAYPMPPHLNHIGNDLCRGLLLFADSKPLGKAGLRWLRIHISNVF--GYDKASFAE 1005
Query: 490 RLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALR-SSSPNSVISHLP 548
R F +H DI DS + P++GNRWWL+A+DP+QCL+AC+ L AL P + S LP
Sbjct: 1006 REQFAIDHEADIRDSVERPLDGNRWWLKADDPWQCLSACMELKAALEHPEGPEAYGSCLP 1065
Query: 549 IHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTF 608
+HQDG+CNGLQHYAALG D A VNL E+PADVYS +A V + ++ K
Sbjct: 1066 VHQDGTCNGLQHYAALGGDLAGAKQVNLSRGERPADVYSGVADLVIKALDEEAAK----- 1120
Query: 609 PNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACY 668
LA +L ++ RK+VKQTVMT+VYGVT+IGA++Q+ ++L ++G + + LF AA Y
Sbjct: 1121 -GERLAGILQGKVTRKVVKQTVMTTVYGVTFIGAKNQVMRQLADRGDVPAED-LFAAASY 1178
Query: 669 AAKVTLAALGEVFEAARGIMSWLGDCAKVIAY---------------------------- 700
AKV ++ +G +F A+ I WL AKVIA
Sbjct: 1179 LAKVIMSCIGNLFSGAQKIQDWLSFSAKVIAKSIPAQRVEEATRPYQPSESSLKRADVHG 1238
Query: 701 --------------ENQAVHWTTPLGLPVVQPYCKTERHLVS 728
+ +V WTT LGLPVVQPY K+++ VS
Sbjct: 1239 FARDPAKADRIVKEQMTSVIWTTALGLPVVQPYRKSKKKQVS 1280
>H0GU88_9SACH (tr|H0GU88) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae x
Saccharomyces kudriavzevii VIN7 GN=VIN7_6851 PE=3 SV=1
Length = 1357
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 245/683 (35%), Positives = 364/683 (53%), Gaps = 80/683 (11%)
Query: 74 KAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----QLVQAAVQIG 129
K H + + + P + + K+ VI + +++ L N G V + +A + +G
Sbjct: 489 KKHLNKVETNRLDYGPYLTLIDPGKMCVITILELLKL---NSTGGVIEGMRTARAVISVG 545
Query: 130 MALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVN---GLIKRKKLKEVHV 186
A+E E R + L K+E+ T ++N + +K V + + ++++ +
Sbjct: 546 KAIEMEFRSEQVL---------KSESQTFRDVNKKSPEFKKLVQNAKSVFRSSQIEQSKI 596
Query: 187 VLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIR-----PAFRHGFK 241
+ W + +AK+GS LI +LI A V Q D + PAF HG++
Sbjct: 597 L--------WPQNIRAKIGSVLISMLIHVAKVFV---QGVDPITKAKVHGEAPAFAHGYQ 645
Query: 242 PQSRSPGQKILKNYGVIQCDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLF 299
+ G K+ GV++ ++ L E+ K W + GG+ +
Sbjct: 646 YHN---GSKL----GVLKIHKTLIHQLNGERLIASVQPQLLPMLVEPKPWVNWRSGGYHY 698
Query: 300 LPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGG 358
S ++RT S +Q +K + +V++ L++LG+T +N ++ DVV +W G
Sbjct: 699 TQSTLLRTKDSPEQVAYLKAASDNGDIDRVYDGLNVLGDTPWTVNRKVFDVVSQVWNRGE 758
Query: 359 NVAGLVDC-ENVPLPDKPP-TEDLKQIQEWKYRVRK-AKKMNLERHSQRCDTELKLSVAR 415
+ + E + LP PP D ++ WK +V+ A K + +R S RCDT KL +AR
Sbjct: 759 SFLDIPSAQEEMVLPLAPPRNSDPSILRAWKLQVKTIANKFSSDR-SNRCDTNYKLEIAR 817
Query: 416 KMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLA 475
E Y+PHNLDFRGRAYP+ PH NHLG+D+ RGLL F G+ LG SGL+WLKIHL+
Sbjct: 818 AFLGEK-LYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLS 876
Query: 476 NLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEAL 535
NL+ G +KL + R+ F E+H++D+ DSA+NP++G RWW A+ P+Q LA C L+E +
Sbjct: 877 NLF--GFDKLRLEDRVAFTESHLNDVKDSAENPLSGERWWTTADKPWQALATCFELNEVM 934
Query: 536 RSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHD 595
+ +P ISH P+HQDG+CNGLQHYAALG D A VNLV +KP DVY+ +A V
Sbjct: 935 KMDNPEEFISHQPVHQDGTCNGLQHYAALGGDVEGATQVNLVPNDKPQDVYAHVARLVQK 994
Query: 596 IMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGL 655
+ + K AK+L D+I RK+VKQTVMT+VYGVTY+GA QI K+L
Sbjct: 995 RLEIAAEKGDEN------AKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLSP--- 1045
Query: 656 ITDDRL-LFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI-----------AYEN- 702
I DDR + Y K A+ E+F +A I WLG+ AK I +++N
Sbjct: 1046 IFDDRKESLDYSKYLTKHVFGAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNG 1105
Query: 703 ------QAVHWTTPLGLPVVQPY 719
+V WTTPLGLP+VQPY
Sbjct: 1106 NKPDFMSSVIWTTPLGLPIVQPY 1128
>H0GFK8_9SACH (tr|H0GFK8) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae x
Saccharomyces kudriavzevii VIN7 GN=VIN7_1488 PE=3 SV=1
Length = 1351
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 247/674 (36%), Positives = 362/674 (53%), Gaps = 90/674 (13%)
Query: 88 APNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----QLVQAAVQIGMALEQEVRIHKFLE 143
P + + K+ VI + +++ L N G V + +A + +G A+E E R + L
Sbjct: 497 GPYLTLIDPGKMCVITILELLKL---NSTGGVIEGMRTARAVISVGKAIEMEFRSEQVL- 552
Query: 144 GNKSLQSKKTEADTEENLNNDKEKQRKFVN---GLIKRKKLKEVHVVLKQEEVSPWSRAA 200
K+E+ ++N + +K V + + ++++ ++ W ++
Sbjct: 553 --------KSESQAFRDVNKKSPEFKKLVQNAKSVFRSSQIEQSKIL--------WPQSI 596
Query: 201 QAKLGSRLIELLIETAYVHSPVNQSADTPPDIR-----PAFRHGFKPQSRSPGQKILKNY 255
+A++GS LI +LI+ A V Q D + PAF HG++ + G K+
Sbjct: 597 RARIGSVLISMLIQVAKVSV---QGVDPVTKAKVHGEAPAFAHGYQYHN---GSKL---- 646
Query: 256 GVIQCDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQ 313
GV++ ++ L E+ K W + GG+ + S ++RT S +Q
Sbjct: 647 GVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKDSPEQ 706
Query: 314 QDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC----EN 368
+K + +V++ L++LG T +N ++ DVV +W G G +D +
Sbjct: 707 VAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQVWNKG---EGFLDIPGAQDE 763
Query: 369 VPLPDKPP-TEDLKQIQEWKYRVRK-AKKMNLERHSQRCDTELKLSVARKMKDEDCFYYP 426
+ LP PP D ++ WK +V+ A K + +R S RCDT KL +AR E Y+P
Sbjct: 764 MVLPPAPPKNSDPTILRAWKLQVKTIANKFSSDR-SNRCDTNYKLEIARAFLGEK-LYFP 821
Query: 427 HNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLS 486
HNLDFRGRAYP+ PH NHLG+D+ RGLL F G+ LG SGL+WLKIHL+NL+ G +KL
Sbjct: 822 HNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLP 879
Query: 487 YDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISH 546
R+ F E+H+ DI DSA+NP+ G+RWW A+ P+Q LA C L+E ++ +P ISH
Sbjct: 880 LKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFELNEVMKMDNPEEFISH 939
Query: 547 LPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPS 606
P+HQDG+CNGLQHYAALG D A VNLV +KP DVY+ +A V +R S K
Sbjct: 940 QPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVARLVTKKIRNCSRKGDE 999
Query: 607 TFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDR---LLF 663
AK+L D+I RK+VKQTVMT+VYGVTY+GA QI K+L I DDR L F
Sbjct: 1000 N------AKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLSP---IFDDRKESLDF 1050
Query: 664 TAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI-----------AYEN-------QAV 705
+ Y K +A+ E+F +A I WLG+ AK I +++N +V
Sbjct: 1051 SK--YLTKHVFSAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSV 1108
Query: 706 HWTTPLGLPVVQPY 719
WTTPLGLP+VQPY
Sbjct: 1109 IWTTPLGLPIVQPY 1122
>I1CN36_RHIO9 (tr|I1CN36) DNA-directed RNA polymerase OS=Rhizopus delemar (strain
RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880)
GN=RO3G_14577 PE=3 SV=1
Length = 1239
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 257/748 (34%), Positives = 384/748 (51%), Gaps = 97/748 (12%)
Query: 48 APNLPRVKSLLLGWFEPLKEAVEAEQKAHQARSKK--QQASIAPNVDSLPAAKVAVIVMH 105
A +L +K ++ W + L ++ E K + + + ++ + P + LP ++++ +
Sbjct: 301 AMHLTPLKRIMWTWHQNLTLLIDEEIKRCEVAAPRDHERRAYGPFLKVLPKDTLSIVTIL 360
Query: 106 KMMSLVMENEEGC---VQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLN 162
+++ L N G ++ +A + +G A+E E + ++Q KK A +++N+
Sbjct: 361 ELLRL--HNSSGIGDGMKTARAILDVGKAVEME---------HNAVQMKK-HAKSQQNIQ 408
Query: 163 NDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSP-WSRAAQAKLGSRLIELLIETAYVHSP 221
N R F N + + K V+ E +P W +AK+GS L LL+E A + P
Sbjct: 409 NVLSSGRLF-NMAVNKAHKKIVNNDENSAEWNPVWPTTTRAKVGSVLTSLLLEAAKIPVP 467
Query: 222 VNQSADTPPDIR---PAFRHGFKPQSRSPGQKIL-KNYGVIQ-CDPLV-LAGLEKCAKHX 275
++ +T I PAF H + Q +L K G+I+ D L + E
Sbjct: 468 -SRDPETGKKIVENIPAFFHTY--------QYVLGKRVGIIKFADQLTEMLSREPIRDTL 518
Query: 276 XXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVM-KNVKGEQMQKVFEALDI 334
+ W Y+ GG+L S MR S +Q + K + + +Q V LD+
Sbjct: 519 HPRLLPMLVPPRPWLSYNSGGYLQTKSVCMRIKDSAEQLIYLHKASERDLLQDVLAGLDV 578
Query: 335 LGNTKRRINGRLLDVVESIWAGGGNVAGLVDCEN--VPLPDKPPT--EDLKQIQEWKYRV 390
LG+T+ ++N + ++ W G +A + N PLP KP D K W V
Sbjct: 579 LGSTRWKVNKNVFKIILEAWNKGEAIADIPPAVNGPTPLPPKPENYHTDPKAKFNWVNEV 638
Query: 391 RKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLC 450
++ + HS RCD K+ AR + Y+PHN+DFRGRAYPM P LNHLG+DLC
Sbjct: 639 KQIQTTEKNNHSLRCDVNYKVETARAFLNLP-MYFPHNMDFRGRAYPMPPTLNHLGNDLC 697
Query: 451 RGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVN 510
RGLL F E +PLG+ G RWLKIHLANLY G +K S+ R F ++I +I D+ DNP+
Sbjct: 698 RGLLHFEEAKPLGEKGWRWLKIHLANLY--GYDKHSFTEREQFTLDNIDNIIDAVDNPLT 755
Query: 511 GNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELE 570
G +WWL+A+ P+QCLAAC ++EA+RS P S LP+HQDG+CNGLQHYAALG D
Sbjct: 756 GKQWWLKADSPWQCLAACFEVAEAVRSGKPEEFKSRLPVHQDGTCNGLQHYAALGGDLAG 815
Query: 571 AAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTV 630
A AVNL A ++PADVY+ +A V+ + + + + AK+L + RK+VKQTV
Sbjct: 816 ARAVNLAAGDRPADVYTGVADMVNKYIDKAAEEGNE------YAKILQGNVSRKVVKQTV 869
Query: 631 MTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSW 690
MT+VYGVT++GAR QI+ RL+E I D+ ++ + Y AK ++LGE+F AR I W
Sbjct: 870 MTNVYGVTFVGARAQIENRLKENPDIPRDK-VYALSSYLAKAVFSSLGEMFNGARQIQDW 928
Query: 691 LGDCAKVIA------------------------------------------------YEN 702
L D A+ IA +
Sbjct: 929 LTDSARRIARSVPLETLEESGVVKHNSGSIEDAKKSKAKAKESKKKKQVFSARNPSSSQM 988
Query: 703 QAVHWTTPLGLPVVQPYCKTERHLVSLL 730
+V WTTPLGLP+VQPY ++ + V+ L
Sbjct: 989 TSVIWTTPLGLPIVQPYRRSGKRQVATL 1016
>B6K333_SCHJY (tr|B6K333) DNA-directed RNA polymerase OS=Schizosaccharomyces
japonicus (strain yFS275 / FY16936) GN=SJAG_03014 PE=3
SV=1
Length = 1169
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 241/711 (33%), Positives = 385/711 (54%), Gaps = 70/711 (9%)
Query: 49 PNLPRVKSLLLGWFEPLKEAVEAE---------QKAHQARSKKQQASIAPNVDSLPAAKV 99
P+ + +LL W+E L+ ++ E KA +S+ + A A + L +K+
Sbjct: 325 PHSRSLNALLYVWYEKLEALIQEEFRQIEDSENNKASPYKSRTR-AEYAQYLKLLSPSKL 383
Query: 100 AVIVMHKMMSLVMENEEGC--VQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADT 157
A I + +M++ V N+ C V+ A + +G A E+E ++ LQ + E +
Sbjct: 384 AAITVLEMLTFVT-NKRYCTGVRSTFALMSVGRAFEKEY-------FSEQLQKIEAEGNL 435
Query: 158 EENLNNDK-EKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETA 216
+++++ K + N +K+ + E + +++ PWS K+ S + LLI +A
Sbjct: 436 PKSVDSKKLFSSPRLFNSFVKKIRDNEDNGIVQSSLYQPWSPNILVKVASVTVSLLINSA 495
Query: 217 YVHSPV--NQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLV--LAGLEKCA 272
+ ++ T AF+HG++ + G+K+ GVI P++ + E
Sbjct: 496 KIRDSALDPETKSTVFQDSSAFQHGYRYLA---GRKV----GVIVAHPVLYDILASELSG 548
Query: 273 KHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFEA 331
H + W ++ GG+ + ++R S +Q +K Q++ + E
Sbjct: 549 AHLPPYRLPMLVKPRPWLMWNSGGYYYSSESVLRFKESHEQLLYLKAASDSGQLKDLLEG 608
Query: 332 LDILGNTKRRINGRLLDVVESIWAGGGNVAGL------VDCENVPLPDKPPTEDLKQIQE 385
L LGN ++N ++ D++ IW G + + +D + +P P+ E
Sbjct: 609 LTALGNVGWKVNRKVYDMLVKIWNTGESFLSIPSANTTLDIQEMPEKSIDPSAR----AE 664
Query: 386 WKYRVRKAKKMNL-ERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNH 444
W R+ K + ++ +HSQRC+ L +A+ E FY+PHN+DFRGRAYP+ HL+H
Sbjct: 665 W-LRMLKERSLDFASQHSQRCEFNYTLEIAKAFLHE-TFYFPHNVDFRGRAYPIPSHLHH 722
Query: 445 LGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDS 504
+ SD CR LL FAEG+PLG+ G +WLK+ LANL+ G K + R+ FV+NH+ DIF+S
Sbjct: 723 VNSDFCRSLLIFAEGKPLGEEGFQWLKVQLANLF--GKNKSTIQERIDFVDNHLQDIFNS 780
Query: 505 ADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAAL 564
D P++G ++W +A+DPFQ LA C +++A+RS P+S ISH+P+ QDG+CNGLQHYAAL
Sbjct: 781 VDKPLDGEQFWTKADDPFQALAVCFEIADAIRSGDPSSFISHVPVQQDGTCNGLQHYAAL 840
Query: 565 GRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNK-DPSTFPNALLAKVLIDQIDR 623
G D A VNL +P DVY+ +A RV I+++++ DP +A++L D++ R
Sbjct: 841 GGDPEGAREVNLEPSNRPNDVYAAVAARVISILKKEAAAGDP-------MAELLKDRVTR 893
Query: 624 KLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEA 683
++KQ VMT+VYGVTY+GAR QI+K+L+ + I D LL A+ + AK +L +F+
Sbjct: 894 TVIKQPVMTNVYGVTYVGARAQIEKQLKLQEDIPKD-LLRDASAFLAKRVFQSLRALFKR 952
Query: 684 ARGIMSWLGDCAKVIAY-------------ENQAVHWTTPLGLPVVQPYCK 721
A I WL DCA +IA+ + AV WTTPL LPVVQPY K
Sbjct: 953 AHEIQDWLADCAALIAHSVPEEALKQKELDKMTAVVWTTPLNLPVVQPYRK 1003
>G0S6Z1_CHATD (tr|G0S6Z1) DNA-directed RNA polymerase OS=Chaetomium thermophilum
(strain DSM 1495 / CBS 144.50 / IMI 039719)
GN=CTHT_0035550 PE=3 SV=1
Length = 1394
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 241/672 (35%), Positives = 358/672 (53%), Gaps = 106/672 (15%)
Query: 124 AAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFV----NGLIKRK 179
A Q+ E+++R + E K L +TE K K R+ + NG +K
Sbjct: 470 AVQQVAKVAEEDIRF-QIAEKTKKLPKHQTELQ--------KRKARRLIRVKGNGSLKTT 520
Query: 180 KLKEVHV----VLKQEEVSP-------WSRAAQAKLGSRLIELLIETAYV----HSPVNQ 224
K++ V + E++P W A +AK+G+ L+ ++ETA + PV +
Sbjct: 521 DKKQLGVATLPLATTGEMAPAITENTRWPTAIRAKVGALLLTAMMETAKIMVVRDHPVTK 580
Query: 225 SADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK------CAKHXXXX 278
+ ++PAF H + + G+K+ G+IQ +P ++ L++ A+H
Sbjct: 581 --EKVHQLQPAFSHAMQLRK---GKKV----GIIQANPELVEILKREPRAELLARHLPML 631
Query: 279 XXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQ--MQKVFEALDILG 336
+ W +DKGG L S ++R +Q + E+ M+++ LD+LG
Sbjct: 632 VEP-----EPWTKFDKGGFLECQSPLIRLKNHEIEQKIYAEAAIERGDMEQMMRGLDVLG 686
Query: 337 NTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKP-PTEDLKQIQEWKYRVRKAK 394
T RIN ++ DV+ ++W G A + N+P+P +P ++D + + W +V+ +
Sbjct: 687 KTAWRINRKVFDVMLTVWNEGIAFANIPALHPNIPIPPEPDSSDDPMKKRIWMRQVKAIQ 746
Query: 395 KMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLL 454
HS RC +L +AR D+ FY+PHNLDFRGRAYP+ P+LNH+G+D RG+L
Sbjct: 747 NEKSGMHSVRCFMNFQLEIARAFIDQ-TFYFPHNLDFRGRAYPLPPYLNHMGADHMRGML 805
Query: 455 EFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRW 514
FA+G+PLG++GLRWLKIHLAN+Y G +K S D R F ++++ +I DSA NP+ G RW
Sbjct: 806 LFAKGKPLGENGLRWLKIHLANVY--GYDKASLDDREKFADDNLANIMDSASNPLGGKRW 863
Query: 515 WLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAV 574
WL+ EDP+QCLA C L+ AL+S P +SHLP+HQDG+CNGLQHYAALG D A V
Sbjct: 864 WLQGEDPWQCLATCFELAAALQSPDPTQFVSHLPVHQDGTCNGLQHYAALGGDTWGAQQV 923
Query: 575 NLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSV 634
NL+ EKPADVYS +A V +++ +D+ AK L +I RK+VKQTVMT+V
Sbjct: 924 NLIPGEKPADVYSAVAQLVQEMVTKDAAAGNE------FAKALDGKITRKVVKQTVMTNV 977
Query: 635 YGVTYIGARDQIKKRLE--------EKGLITDDRLLFTAACYAAKVTLAALGEVFEAARG 686
YGVT++GA+ Q++K+L+ + G T + Y A AALG +F A
Sbjct: 978 YGVTFVGAKRQVQKQLDALYPNLESQTGCSTS-----ILSSYMATKIFAALGTMFSGAYA 1032
Query: 687 IMSWLGDCAKVI-------------------------------AYENQAVHWTTPLGLPV 715
I SWLG+ + + N V WTTPL +PV
Sbjct: 1033 IQSWLGEIGDRVCRAITPEQLNRIEAEATGESKKKFTDAELNNTFRNTIV-WTTPLRMPV 1091
Query: 716 VQPYCKTERHLV 727
VQPY K+ +V
Sbjct: 1092 VQPYRKSGTRVV 1103
>H2ASJ8_KAZAF (tr|H2ASJ8) DNA-directed RNA polymerase OS=Kazachstania africana
(strain ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 /
NBRC 1671 / NRRL Y-8276) GN=KAFR0C03560 PE=3 SV=1
Length = 1284
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 243/686 (35%), Positives = 366/686 (53%), Gaps = 77/686 (11%)
Query: 71 AEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----QLVQAAV 126
A K ++ ++ AP + + K+ VI + +++ L N G + + +A +
Sbjct: 412 AANKERLPKADSKRLEYAPYLALVNPEKMCVIAILEILKL---NSTGGIIEGMRTARALI 468
Query: 127 QIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHV 186
+G A+E E R + L+ N+S K + E ++ ++ F + K+++ +
Sbjct: 469 SVGKAIEMEFRSEQLLK-NESYIFKDVNKKSPEFKTYLRKAKKSF-----RSSKIEQAKI 522
Query: 187 VLKQEEVSPWSRAAQAKLGSRLIELLIETAYV---------HSPVNQSADTPPDIRPAFR 237
V W ++ +AK+GS L+ +LI A V H + +A PAF
Sbjct: 523 V--------WPQSIRAKVGSILVSILIHVAKVEIEGIDPITHQKIFGTA-------PAFS 567
Query: 238 HGFKPQSRSPGQKILKNYGVIQCDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKG 295
H ++ + G K+ GVI+ ++ L E+ + W + G
Sbjct: 568 HSYQYHN---GSKL----GVIRIHKSLVQQLDGERLMASVQPQLLPMLVEPRPWVNWKSG 620
Query: 296 GHLFLPSYIMRTHGSRKQQDVMKNVKGEQ-MQKVFEALDILGNTKRRINGRLLDVVESIW 354
G+ + S ++R+ S +Q ++ Q + KV++ L++LG+T +N R+ +++ +W
Sbjct: 621 GYYYTQSTLVRSKDSPEQIAYLEAASNVQALDKVYDGLNVLGDTAWTVNRRIFEIISKVW 680
Query: 355 AGGGNVAGL--VDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLS 412
GG+ + + E+ LP P D I EWK + + S RCD KL
Sbjct: 681 NKGGSFLEIPGIQQESEFLPPPPKNADPSVINEWKNKNKILANKYSSNRSMRCDLNYKLE 740
Query: 413 VARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKI 472
+AR E FY+PHNLDFRGRAYP+ PH NHLG+D+ RGLL F +G+ LGK GL WLK+
Sbjct: 741 IARAFLGER-FYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWKGKRLGKEGLSWLKV 799
Query: 473 HLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNR-WWLRAEDPFQCLAACINL 531
HL+NLY G++K+ R F+++H+ +I DSA+NP+NG WW +A+ P+Q LA CI L
Sbjct: 800 HLSNLY--GVDKVPLLERENFIDDHLEEIKDSAENPLNGKYLWWQKADKPWQALATCIEL 857
Query: 532 SEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAV 591
+EAL+ +P ISH P+HQDG+CNGLQHYAALG D A VNLV EKP DVY+ +A
Sbjct: 858 NEALKLENPEDFISHQPVHQDGTCNGLQHYAALGGDIEGAQQVNLVPGEKPNDVYAHVAK 917
Query: 592 RVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLE 651
V +R KD PN +AK L+D+++RK+VKQTVMT VYGVT +GA QI K+L
Sbjct: 918 IVQGKLRETLQKD----PNDEMAKFLVDKLNRKVVKQTVMTHVYGVTLLGATLQIDKQLN 973
Query: 652 EKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI-----------AY 700
+ L D + Y A+ AA+ E FE A I WLG C+K + ++
Sbjct: 974 D--LFDDSSDSMKYSKYLARHVFAAIRESFEGAHLIQDWLGVCSKKLSKSIRLDVDEKSF 1031
Query: 701 EN-------QAVHWTTPLGLPVVQPY 719
+N +V WTTPLGLP+VQPY
Sbjct: 1032 KNGNKPEFMTSVIWTTPLGLPIVQPY 1057
>I2H7D3_TETBL (tr|I2H7D3) DNA-directed RNA polymerase OS=Tetrapisispora blattae
(strain ATCC 34711 / CBS 6284 / DSM 70876 / NBRC 10599 /
NRRL Y-10934 / UCD 77-7) GN=TBLA0G03490 PE=3 SV=1
Length = 1352
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 244/671 (36%), Positives = 372/671 (55%), Gaps = 78/671 (11%)
Query: 85 ASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----QLVQAAVQIGMALEQEVRIHK 140
+ AP ++ + K+ VI + +++ L N G V + +A + +G A+E E R +
Sbjct: 499 SDYAPYLNLVDPEKMCVITILELLKL---NSTGGVFEGMRTARAVISVGKAIELEFRSEQ 555
Query: 141 FLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAA 200
+ + E T +N++ +K+V +K+L++ ++ + E W +AA
Sbjct: 556 LI---------RNEMHTFKNVSTKPHVFKKYVWS--AKKRLRDHNIEKSKIE---WPQAA 601
Query: 201 QAKLGSRLIELLIETAYV----HSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYG 256
+A++GS +I L+ A V H P ++ PAF H ++ + G KI G
Sbjct: 602 RAQIGSIMISTLLHVAKVNVRGHDP--KTNKYVYGELPAFSHSYQYHN---GAKI----G 652
Query: 257 VIQCDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQ 314
V++ ++ L E+ A +KW ++ GG+ + S ++RT S +Q
Sbjct: 653 VLKIHKSLIKQLNGERLATSVQPQQMPMIVKPRKWVSWNSGGYHYSQSILIRTRDSPEQV 712
Query: 315 DVMKNVKGEQM-QKVFEALDILGNTKRRINGRLLDVVESIWAGGG---NVAGLVDCENVP 370
+K V E + ++ L+++G T +N ++ +V+ +W G ++ G+ D + V
Sbjct: 713 AYLKAVSEENLIPTIYSGLNVIGLTGWTVNRKVFNVLSEVWNTGKQFLDIPGIQD-DMVV 771
Query: 371 LPDKPPTEDLKQIQEWKYRVRK-AKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNL 429
LP P + ++++EWK + ++ A K++ +R S RCD+ KL +AR E Y+PHNL
Sbjct: 772 LPPLPSNAEPEEVREWKLKNKEIANKISSDR-SVRCDSNYKLEIARAFLGEK-IYFPHNL 829
Query: 430 DFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDG 489
DFRGRAYP+ PH NHLG+D+ RGLL F +GR LG GL+WLK+HLANL+ G +K S D
Sbjct: 830 DFRGRAYPLSPHFNHLGNDMSRGLLIFWKGRRLGPQGLKWLKVHLANLF--GYDKASLDD 887
Query: 490 RLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPI 549
R+ F HI D+ DSA++P++G WW A+ P+Q LA C+ L+EA + +P ISH P+
Sbjct: 888 RIAFANQHIEDLKDSAEHPLDGKGWWQSADKPWQALATCMELNEAFKLENPEDFISHQPV 947
Query: 550 HQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVH---DIMRRDSNKDPS 606
HQDG+CNGLQHYAALG D A VNLV KP DVY+ +A V D+ ++ ++
Sbjct: 948 HQDGTCNGLQHYAALGGDVEGAIQVNLVPSPKPQDVYNHVAKLVEARLDVAAKEGDE--- 1004
Query: 607 TFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAA 666
AK+L +I RK+VKQTVMT+VYGVT+IGA QI K+L EK D +L F
Sbjct: 1005 ------TAKILQGKITRKVVKQTVMTNVYGVTFIGATRQIAKQLTEK--FDDKQLAFEYG 1056
Query: 667 CYAAKVTLAALGEVFEAARGIMSWLGDCAKVI-----------AYEN-------QAVHWT 708
Y AK AA+ E F+ A I WLG+C+K I ++ N +V WT
Sbjct: 1057 GYLAKHVFAAIRESFKGAHEIQDWLGECSKRISRAIRLDVDSKSFRNGNKPDFMSSVIWT 1116
Query: 709 TPLGLPVVQPY 719
TPLGLP+VQPY
Sbjct: 1117 TPLGLPIVQPY 1127
>G0WE72_NAUDC (tr|G0WE72) DNA-directed RNA polymerase OS=Naumovozyma dairenensis
(strain ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 /
NRRL Y-12639) GN=NDAI0G03060 PE=3 SV=2
Length = 1354
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 243/700 (34%), Positives = 370/700 (52%), Gaps = 77/700 (11%)
Query: 58 LLGWFEPLKEAVEAEQKAHQARSKKQQA-----SIAPNVDSLPAAKVAVIVMHKMMSLVM 112
L W+E + ++ E + Q + +KQ P + + K+ VI + +++ L
Sbjct: 468 LWNWYELMLPILKKEIEKAQLKLEKQSKIFKSQDFDPYLLLVNPEKMCVITILELLKL-- 525
Query: 113 ENEEGCV----QLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQ 168
N G V + +A + +G A+E E R + L K E+ +++N +
Sbjct: 526 -NSTGGVIEGMRTARAVISVGKAIEMEFRSEQLL---------KNESSIFKDINKKSAEF 575
Query: 169 RKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYV----HSPVNQ 224
+K +++R K L++ ++ W +A +A++GS LI LI A + P+ +
Sbjct: 576 KK----IVQRAKSNFRSTQLEKSKIF-WPQAVRAQIGSILISTLIHVAKIDVEGFDPITK 630
Query: 225 SADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGL--EKCAKHXXXXXXXX 282
+ PAF H ++ G K+ GVI+ ++ L E+
Sbjct: 631 TKVYGE--APAFAHSYQ---YCNGMKL----GVIKIHKALINQLNGERLVASVQPQLLPM 681
Query: 283 XXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKG-EQMQKVFEALDILGNTKRR 341
++WK + GG+ + S ++R+ S +Q +K V E + V+ L+ LG T
Sbjct: 682 LVEPREWKNWRSGGYFYTQSTLIRSKESPEQLAYLKAVSDKEAIDDVYNGLNALGKTAWT 741
Query: 342 INGRLLDVVESIWAGGGNVAGL----VDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMN 397
+N RL +++ +W G + D + +P P P D ++EWK + ++
Sbjct: 742 VNKRLFEIISKVWNEGIEFLDIPQIQYDMQLIPPP--PRNSDPSILREWKLQNKEIANKI 799
Query: 398 LERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFA 457
+ S RCDT KL +AR E FY+PHNLDFRGRAYP+ PH NHLG+DL RGLL F
Sbjct: 800 SKNRSIRCDTNYKLEIARAFLGEK-FYFPHNLDFRGRAYPLSPHFNHLGNDLSRGLLIFW 858
Query: 458 EGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLR 517
+G+ LG GL WLKIH ANLY G++K+ + R+ F+E+HI D+ D+A+NP++G WW +
Sbjct: 859 KGKKLGPDGLSWLKIHCANLY--GMDKIPFTERIQFIEDHIEDVKDTAENPLDGKGWWKK 916
Query: 518 AEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLV 577
A+ P+Q LA CI L+EAL+ +P ISH P+HQDG+CNGLQHYAALG D A VNL+
Sbjct: 917 ADKPWQLLATCIELNEALKLDNPEDFISHQPVHQDGTCNGLQHYAALGGDVEGATQVNLI 976
Query: 578 AKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGV 637
E+P DVY +A V + + + A++L+D+I RK+VKQ VMT+VYGV
Sbjct: 977 PNERPQDVYRHVANLVKKRLEK------AVLAGDKKAELLVDKITRKVVKQPVMTNVYGV 1030
Query: 638 TYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKV 697
TY+GA QI+K+L E D + F + Y A + E+F +A I WLG+CAK
Sbjct: 1031 TYVGATFQIEKQLSE--YFPDRKQCFDLSKYLTFHVFATIRELFHSAHLIQDWLGECAKR 1088
Query: 698 I-----------AYEN-------QAVHWTTPLGLPVVQPY 719
I +++N +V WTTPLGLP+VQPY
Sbjct: 1089 ITKSIRLDVDGKSFKNGNKPDFMSSVIWTTPLGLPIVQPY 1128
>Q6FLX9_CANGA (tr|Q6FLX9) DNA-directed RNA polymerase OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CAGL0K12628g PE=3 SV=1
Length = 1326
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 244/665 (36%), Positives = 355/665 (53%), Gaps = 72/665 (10%)
Query: 88 APNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----QLVQAAVQIGMALEQEVRIHKFLE 143
AP + K+ VI + +++ L N G V + +A + + A+E E R + L
Sbjct: 473 APYFTLVNPEKMCVITILELLKL---NSTGGVIDGMRTARAVISVSKAIELEFRSEQLL- 528
Query: 144 GNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAK 203
+E T +++N + +++V + + E+ ++ W + +AK
Sbjct: 529 --------NSENQTFKDINKKSHEFKRYVQSAKRTFRSMEI-----EKSRIIWPQTVRAK 575
Query: 204 LGSRLIELLIETAYVH----SPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQ 259
+GS LI LI A V PV + + PAF H + + G K+ G+I+
Sbjct: 576 IGSTLISFLIHVAKVSVEGTDPVTK--EKVYGDAPAFAHTYVYHN---GSKL----GIIK 626
Query: 260 CDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVM 317
++ L E+ + WKG+ GG+L+ S ++R+ S +Q +
Sbjct: 627 IHKALINRLNGERLLASVQPQLLPMLVKPRPWKGWKSGGYLYTQSILVRSRDSPEQLAYL 686
Query: 318 KNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGN---VAGLVDCENVPLPD 373
+ V + K+++ L++LG T +N ++ DVV +W G N + G+ D E LP
Sbjct: 687 QAVSDSGAIDKIYDGLNVLGETAWTVNRKVFDVVSKVWNEGTNFLEIPGIQD-ELKLLPP 745
Query: 374 KPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRG 433
P + D I+EWK + ++ S RCD KL +AR E FY+PHNLDFRG
Sbjct: 746 PPRSSDPTVIREWKLKNKELANKYSSDKSVRCDLNYKLEIARAFLGEK-FYFPHNLDFRG 804
Query: 434 RAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGF 493
RAYP+ PH NHLG+DL R LL F +G+ LG GL WLK+HL+NL+ G++K+ + R+ F
Sbjct: 805 RAYPLSPHFNHLGNDLSRSLLIFWKGKRLGPDGLNWLKVHLSNLF--GVDKVPLEDRVKF 862
Query: 494 VENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDG 553
E HI DI DSA+NP+NG WW A+ P+Q LA C+ L+EAL+ +P ISH P+HQDG
Sbjct: 863 TECHIEDIKDSAENPLNGKGWWKTADKPWQALATCMELNEALKLDNPEDYISHQPVHQDG 922
Query: 554 SCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALL 613
+CNGLQHY+ALG D A VNLV EKP DVYS +A V + + + K
Sbjct: 923 TCNGLQHYSALGGDVEGATQVNLVPSEKPQDVYSFVAKLVEARLEKAAAKGDEK------ 976
Query: 614 AKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLL-FTAACYAAKV 672
A +L ++ RK+VKQTVMT+VYGVTY+GA QI K+L I DDR + Y AK
Sbjct: 977 ALILKGKVSRKVVKQTVMTNVYGVTYVGATFQIAKQLTA---IFDDRAYSLELSKYLAKH 1033
Query: 673 TLAALGEVFEAARGIMSWLGDCAKVI-----------AYEN-------QAVHWTTPLGLP 714
AA+ E+FE A I WLG+CAK I +++N ++ WTTPLGLP
Sbjct: 1034 VFAAVRELFEGAHLIQDWLGECAKRISKSIRLDVDEKSFKNGDKPDYMSSIIWTTPLGLP 1093
Query: 715 VVQPY 719
+VQPY
Sbjct: 1094 IVQPY 1098
>N1P4I3_YEASX (tr|N1P4I3) Rpo41p OS=Saccharomyces cerevisiae CEN.PK113-7D
GN=CENPK1137D_3346 PE=4 SV=1
Length = 1351
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 245/674 (36%), Positives = 361/674 (53%), Gaps = 90/674 (13%)
Query: 88 APNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----QLVQAAVQIGMALEQEVRIHKFLE 143
P + + K+ VI + +++ L N G V + +A + +G A+E E R + L
Sbjct: 497 GPYLTLIDPGKMCVITILELLKL---NSTGGVIEGMRTARAVISVGKAIEMEFRSEQVL- 552
Query: 144 GNKSLQSKKTEADTEENLNNDKEKQRKFVN---GLIKRKKLKEVHVVLKQEEVSPWSRAA 200
K+E+ ++N + +K V + + ++++ ++ W ++
Sbjct: 553 --------KSESQAFRDVNKKSPEFKKLVQNAKSVFRSSQIEQSKIL--------WPQSI 596
Query: 201 QAKLGSRLIELLIETAYVHSPVNQSADTPPDIR-----PAFRHGFKPQSRSPGQKILKNY 255
+A++GS LI +LI+ A V Q D + PAF HG++ + G K+
Sbjct: 597 RARIGSVLISMLIQVAKVSV---QGVDPVTKAKVHGEAPAFAHGYQYHN---GSKL---- 646
Query: 256 GVIQCDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQ 313
GV++ ++ L E+ K W + GG+ + S ++RT S +Q
Sbjct: 647 GVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKDSPEQ 706
Query: 314 QDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC----EN 368
+K + +V++ L++LG T +N ++ DVV +W G G +D +
Sbjct: 707 VAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQVWNKG---EGFLDIPGAQDE 763
Query: 369 VPLPDKPP-TEDLKQIQEWKYRVRK-AKKMNLERHSQRCDTELKLSVARKMKDEDCFYYP 426
+ LP PP D ++ WK +V+ A K + +R S RCDT KL +AR E Y+P
Sbjct: 764 MVLPPAPPKNSDPSILRAWKLQVKTIANKFSSDR-SNRCDTNYKLEIARAFLGEK-LYFP 821
Query: 427 HNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLS 486
HNLDFRGRAYP+ PH NHLG+D+ RGLL F G+ LG SGL+WLKIHL+NL+ G +KL
Sbjct: 822 HNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLP 879
Query: 487 YDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISH 546
R+ F E+H+ DI DSA+NP+ G+RWW A+ P+Q LA C L+E ++ +P ISH
Sbjct: 880 LKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFELNEVMKMDNPEEFISH 939
Query: 547 LPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPS 606
P+HQDG+CNGLQHYAALG D A VNLV +KP DVY+ +A V + + K
Sbjct: 940 QPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDE 999
Query: 607 TFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDR---LLF 663
AK+L D+I RK+VKQTVMT+VYGVTY+GA QI K+L I DDR L F
Sbjct: 1000 N------AKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLSP---IFDDRKESLDF 1050
Query: 664 TAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI-----------AYEN-------QAV 705
+ Y K +A+ E+F +A I WLG+ AK I +++N +V
Sbjct: 1051 SK--YLTKHVFSAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSV 1108
Query: 706 HWTTPLGLPVVQPY 719
WTTPLGLP+VQPY
Sbjct: 1109 IWTTPLGLPIVQPY 1122
>G2WDA5_YEASK (tr|G2WDA5) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain Kyokai no. 7 / NBRC 101557) GN=K7_RPO41 PE=3 SV=1
Length = 1351
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 245/674 (36%), Positives = 361/674 (53%), Gaps = 90/674 (13%)
Query: 88 APNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----QLVQAAVQIGMALEQEVRIHKFLE 143
P + + K+ VI + +++ L N G V + +A + +G A+E E R + L
Sbjct: 497 GPYLTLIDPGKMCVITILELLKL---NSTGGVIEGMRTARAVISVGKAIEMEFRSEQVL- 552
Query: 144 GNKSLQSKKTEADTEENLNNDKEKQRKFVN---GLIKRKKLKEVHVVLKQEEVSPWSRAA 200
K+E+ ++N + +K V + + ++++ ++ W ++
Sbjct: 553 --------KSESQAFRDVNKKSPEFKKLVQNAKSVFRSSQIEQSKIL--------WPQSI 596
Query: 201 QAKLGSRLIELLIETAYVHSPVNQSADTPPDIR-----PAFRHGFKPQSRSPGQKILKNY 255
+A++GS LI +LI+ A V Q D + PAF HG++ + G K+
Sbjct: 597 RARIGSVLISMLIQVAKVSV---QGVDPVTKAKVHGEAPAFAHGYQYHN---GSKL---- 646
Query: 256 GVIQCDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQ 313
GV++ ++ L E+ K W + GG+ + S ++RT S +Q
Sbjct: 647 GVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKDSPEQ 706
Query: 314 QDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC----EN 368
+K + +V++ L++LG T +N ++ DVV +W G G +D +
Sbjct: 707 VAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQVWNKG---EGFLDIPGAQDE 763
Query: 369 VPLPDKPP-TEDLKQIQEWKYRVRK-AKKMNLERHSQRCDTELKLSVARKMKDEDCFYYP 426
+ LP PP D ++ WK +V+ A K + +R S RCDT KL +AR E Y+P
Sbjct: 764 MVLPPAPPKNSDPSILRAWKLQVKTIANKFSSDR-SNRCDTNYKLEIARAFLGEK-LYFP 821
Query: 427 HNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLS 486
HNLDFRGRAYP+ PH NHLG+D+ RGLL F G+ LG SGL+WLKIHL+NL+ G +KL
Sbjct: 822 HNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLP 879
Query: 487 YDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISH 546
R+ F E+H+ DI DSA+NP+ G+RWW A+ P+Q LA C L+E ++ +P ISH
Sbjct: 880 LKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFELNEVMKMDNPEEFISH 939
Query: 547 LPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPS 606
P+HQDG+CNGLQHYAALG D A VNLV +KP DVY+ +A V + + K
Sbjct: 940 QPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDE 999
Query: 607 TFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDR---LLF 663
AK+L D+I RK+VKQTVMT+VYGVTY+GA QI K+L I DDR L F
Sbjct: 1000 N------AKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLSP---IFDDRKESLDF 1050
Query: 664 TAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI-----------AYEN-------QAV 705
+ Y K +A+ E+F +A I WLG+ AK I +++N +V
Sbjct: 1051 SK--YLTKHVFSAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSV 1108
Query: 706 HWTTPLGLPVVQPY 719
WTTPLGLP+VQPY
Sbjct: 1109 IWTTPLGLPIVQPY 1122
>A7A203_YEAS7 (tr|A7A203) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain YJM789) GN=RPO41 PE=3 SV=1
Length = 1351
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 245/674 (36%), Positives = 361/674 (53%), Gaps = 90/674 (13%)
Query: 88 APNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----QLVQAAVQIGMALEQEVRIHKFLE 143
P + + K+ VI + +++ L N G V + +A + +G A+E E R + L
Sbjct: 497 GPYLTLIDPGKMCVITILELLKL---NSTGGVIEGMRTARAVISVGKAIEMEFRSEQVL- 552
Query: 144 GNKSLQSKKTEADTEENLNNDKEKQRKFVN---GLIKRKKLKEVHVVLKQEEVSPWSRAA 200
K+E+ ++N + +K V + + ++++ ++ W ++
Sbjct: 553 --------KSESQAFRDVNKKSPEFKKLVQNAKSVFRSSQIEQSKIL--------WPQSI 596
Query: 201 QAKLGSRLIELLIETAYVHSPVNQSADTPPDIR-----PAFRHGFKPQSRSPGQKILKNY 255
+A++GS LI +LI+ A V Q D + PAF HG++ + G K+
Sbjct: 597 RARIGSVLISMLIQVAKVSV---QGVDPVTKAKVHGEAPAFAHGYQYHN---GSKL---- 646
Query: 256 GVIQCDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQ 313
GV++ ++ L E+ K W + GG+ + S ++RT S +Q
Sbjct: 647 GVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKDSPEQ 706
Query: 314 QDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC----EN 368
+K + +V++ L++LG T +N ++ DVV +W G G +D +
Sbjct: 707 VAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQVWNKG---EGFLDIPGAQDE 763
Query: 369 VPLPDKPP-TEDLKQIQEWKYRVRK-AKKMNLERHSQRCDTELKLSVARKMKDEDCFYYP 426
+ LP PP D ++ WK +V+ A K + +R S RCDT KL +AR E Y+P
Sbjct: 764 MVLPPAPPKNSDPSILRAWKLQVKTIANKFSSDR-SNRCDTNYKLEIARAFLGEK-LYFP 821
Query: 427 HNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLS 486
HNLDFRGRAYP+ PH NHLG+D+ RGLL F G+ LG SGL+WLKIHL+NL+ G +KL
Sbjct: 822 HNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLP 879
Query: 487 YDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISH 546
R+ F E+H+ DI DSA+NP+ G+RWW A+ P+Q LA C L+E ++ +P ISH
Sbjct: 880 LKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFELNEVMKMDNPEEFISH 939
Query: 547 LPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPS 606
P+HQDG+CNGLQHYAALG D A VNLV +KP DVY+ +A V + + K
Sbjct: 940 QPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDE 999
Query: 607 TFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDR---LLF 663
AK+L D+I RK+VKQTVMT+VYGVTY+GA QI K+L I DDR L F
Sbjct: 1000 N------AKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLSP---IFDDRKESLDF 1050
Query: 664 TAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI-----------AYEN-------QAV 705
+ Y K +A+ E+F +A I WLG+ AK I +++N +V
Sbjct: 1051 SK--YLTKHVFSAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSV 1108
Query: 706 HWTTPLGLPVVQPY 719
WTTPLGLP+VQPY
Sbjct: 1109 IWTTPLGLPIVQPY 1122
>C8Z7P6_YEAS8 (tr|C8Z7P6) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse)
GN=EC1118_1F14_0430g PE=3 SV=1
Length = 1351
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 245/674 (36%), Positives = 361/674 (53%), Gaps = 90/674 (13%)
Query: 88 APNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----QLVQAAVQIGMALEQEVRIHKFLE 143
P + + K+ VI + +++ L N G V + +A + +G A+E E R + L
Sbjct: 497 GPYLTLIDPGKMCVITILELLKL---NSTGGVIEGMRTARAVISVGKAIEMEFRSEQVL- 552
Query: 144 GNKSLQSKKTEADTEENLNNDKEKQRKFVN---GLIKRKKLKEVHVVLKQEEVSPWSRAA 200
K+E+ ++N + +K V + + ++++ ++ W ++
Sbjct: 553 --------KSESQAFRDVNKKSPEFKKLVQNAKSVFRSSQIEQSKIL--------WPQSI 596
Query: 201 QAKLGSRLIELLIETAYVHSPVNQSADTPPDIR-----PAFRHGFKPQSRSPGQKILKNY 255
+A++GS LI +LI+ A V Q D + PAF HG++ + G K+
Sbjct: 597 RARIGSVLISMLIQVAKVSV---QGVDPVTKAKVHGEAPAFAHGYQYHN---GSKL---- 646
Query: 256 GVIQCDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQ 313
GV++ ++ L E+ K W + GG+ + S ++RT S +Q
Sbjct: 647 GVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKDSPEQ 706
Query: 314 QDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC----EN 368
+K + +V++ L++LG T +N ++ DVV +W G G +D +
Sbjct: 707 VAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQVWNKG---EGFLDIPGAQDE 763
Query: 369 VPLPDKPP-TEDLKQIQEWKYRVRK-AKKMNLERHSQRCDTELKLSVARKMKDEDCFYYP 426
+ LP PP D ++ WK +V+ A K + +R S RCDT KL +AR E Y+P
Sbjct: 764 MVLPPAPPKNSDPTILRAWKLQVKTIANKFSSDR-SNRCDTNYKLEIARAFLGEK-LYFP 821
Query: 427 HNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLS 486
HNLDFRGRAYP+ PH NHLG+D+ RGLL F G+ LG SGL+WLKIHL+NL+ G +KL
Sbjct: 822 HNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLP 879
Query: 487 YDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISH 546
R+ F E+H+ DI DSA+NP+ G+RWW A+ P+Q LA C L+E ++ +P ISH
Sbjct: 880 LKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFELNEVMKMDNPEEFISH 939
Query: 547 LPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPS 606
P+HQDG+CNGLQHYAALG D A VNLV +KP DVY+ +A V + + K
Sbjct: 940 QPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDE 999
Query: 607 TFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDR---LLF 663
AK+L D+I RK+VKQTVMT+VYGVTY+GA QI K+L I DDR L F
Sbjct: 1000 N------AKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLSP---IFDDRKESLDF 1050
Query: 664 TAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI-----------AYEN-------QAV 705
+ Y K +A+ E+F +A I WLG+ AK I +++N +V
Sbjct: 1051 SK--YLTKHVFSAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSV 1108
Query: 706 HWTTPLGLPVVQPY 719
WTTPLGLP+VQPY
Sbjct: 1109 IWTTPLGLPIVQPY 1122
>C7GY77_YEAS2 (tr|C7GY77) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain JAY291) GN=RPO41 PE=3 SV=1
Length = 1351
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 245/674 (36%), Positives = 361/674 (53%), Gaps = 90/674 (13%)
Query: 88 APNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----QLVQAAVQIGMALEQEVRIHKFLE 143
P + + K+ VI + +++ L N G V + +A + +G A+E E R + L
Sbjct: 497 GPYLTLIDPGKMCVITILELLKL---NSTGGVIEGMRTARAVISVGKAIEMEFRSEQVL- 552
Query: 144 GNKSLQSKKTEADTEENLNNDKEKQRKFVN---GLIKRKKLKEVHVVLKQEEVSPWSRAA 200
K+E+ ++N + +K V + + ++++ ++ W ++
Sbjct: 553 --------KSESQAFRDVNKKSPEFKKLVQNAKSVFRSSQIEQSKIL--------WPQSI 596
Query: 201 QAKLGSRLIELLIETAYVHSPVNQSADTPPDIR-----PAFRHGFKPQSRSPGQKILKNY 255
+A++GS LI +LI+ A V Q D + PAF HG++ + G K+
Sbjct: 597 RARIGSVLISMLIQVAKVSV---QGVDPVTKAKVHGEAPAFAHGYQYHN---GSKL---- 646
Query: 256 GVIQCDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQ 313
GV++ ++ L E+ K W + GG+ + S ++RT S +Q
Sbjct: 647 GVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKDSPEQ 706
Query: 314 QDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC----EN 368
+K + +V++ L++LG T +N ++ DVV +W G G +D +
Sbjct: 707 VAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQVWNKG---EGFLDIPGAQDE 763
Query: 369 VPLPDKPP-TEDLKQIQEWKYRVRK-AKKMNLERHSQRCDTELKLSVARKMKDEDCFYYP 426
+ LP PP D ++ WK +V+ A K + +R S RCDT KL +AR E Y+P
Sbjct: 764 MVLPPAPPKNSDPTILRAWKLQVKTIANKFSSDR-SNRCDTNYKLEIARAFLGEK-LYFP 821
Query: 427 HNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLS 486
HNLDFRGRAYP+ PH NHLG+D+ RGLL F G+ LG SGL+WLKIHL+NL+ G +KL
Sbjct: 822 HNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLP 879
Query: 487 YDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISH 546
R+ F E+H+ DI DSA+NP+ G+RWW A+ P+Q LA C L+E ++ +P ISH
Sbjct: 880 LKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFELNEVMKMDNPEEFISH 939
Query: 547 LPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPS 606
P+HQDG+CNGLQHYAALG D A VNLV +KP DVY+ +A V + + K
Sbjct: 940 QPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDE 999
Query: 607 TFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDR---LLF 663
AK+L D+I RK+VKQTVMT+VYGVTY+GA QI K+L I DDR L F
Sbjct: 1000 N------AKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLSP---IFDDRKESLDF 1050
Query: 664 TAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI-----------AYEN-------QAV 705
+ Y K +A+ E+F +A I WLG+ AK I +++N +V
Sbjct: 1051 SK--YLTKHVFSAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSV 1108
Query: 706 HWTTPLGLPVVQPY 719
WTTPLGLP+VQPY
Sbjct: 1109 IWTTPLGLPIVQPY 1122
>B3LUH5_YEAS1 (tr|B3LUH5) DNA-directed RNA polymerase OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=SCRG_05511 PE=3 SV=1
Length = 1351
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 245/674 (36%), Positives = 361/674 (53%), Gaps = 90/674 (13%)
Query: 88 APNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----QLVQAAVQIGMALEQEVRIHKFLE 143
P + + K+ VI + +++ L N G V + +A + +G A+E E R + L
Sbjct: 497 GPYLTLIDPGKMCVITILELLKL---NSTGGVIEGMRTARAVISVGKAIEMEFRSEQVL- 552
Query: 144 GNKSLQSKKTEADTEENLNNDKEKQRKFVN---GLIKRKKLKEVHVVLKQEEVSPWSRAA 200
K+E+ ++N + +K V + + ++++ ++ W ++
Sbjct: 553 --------KSESQAFRDVNKKSPEFKKLVQNAKSVFRSSQIEQSKIL--------WPQSI 596
Query: 201 QAKLGSRLIELLIETAYVHSPVNQSADTPPDIR-----PAFRHGFKPQSRSPGQKILKNY 255
+A++GS LI +LI+ A V Q D + PAF HG++ + G K+
Sbjct: 597 RARIGSVLISMLIQVAKVSV---QGVDPVTKAKVHGEAPAFAHGYQYHN---GSKL---- 646
Query: 256 GVIQCDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQ 313
GV++ ++ L E+ K W + GG+ + S ++RT S +Q
Sbjct: 647 GVLKIHKTLIRQLNGERLIASVQPQLLPMLVEPKPWVNWRSGGYHYTQSTLLRTKDSPEQ 706
Query: 314 QDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC----EN 368
+K + +V++ L++LG T +N ++ DVV +W G G +D +
Sbjct: 707 VAYLKAASDNGDIDRVYDGLNVLGRTPWTVNRKVFDVVSQVWNKG---EGFLDIPGAQDE 763
Query: 369 VPLPDKPP-TEDLKQIQEWKYRVRK-AKKMNLERHSQRCDTELKLSVARKMKDEDCFYYP 426
+ LP PP D ++ WK +V+ A K + +R S RCDT KL +AR E Y+P
Sbjct: 764 MVLPPAPPKNSDPTILRAWKLQVKTIANKFSSDR-SNRCDTNYKLEIARAFLGEK-LYFP 821
Query: 427 HNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLS 486
HNLDFRGRAYP+ PH NHLG+D+ RGLL F G+ LG SGL+WLKIHL+NL+ G +KL
Sbjct: 822 HNLDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLP 879
Query: 487 YDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISH 546
R+ F E+H+ DI DSA+NP+ G+RWW A+ P+Q LA C L+E ++ +P ISH
Sbjct: 880 LKDRVAFTESHLQDIKDSAENPLTGDRWWTTADKPWQALATCFELNEVMKMDNPEEFISH 939
Query: 547 LPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPS 606
P+HQDG+CNGLQHYAALG D A VNLV +KP DVY+ +A V + + K
Sbjct: 940 QPVHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDE 999
Query: 607 TFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDR---LLF 663
AK+L D+I RK+VKQTVMT+VYGVTY+GA QI K+L I DDR L F
Sbjct: 1000 N------AKILKDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLSP---IFDDRKESLDF 1050
Query: 664 TAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI-----------AYEN-------QAV 705
+ Y K +A+ E+F +A I WLG+ AK I +++N +V
Sbjct: 1051 SK--YLTKHVFSAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSV 1108
Query: 706 HWTTPLGLPVVQPY 719
WTTPLGLP+VQPY
Sbjct: 1109 IWTTPLGLPIVQPY 1122
>H3HE68_PHYRM (tr|H3HE68) DNA-directed RNA polymerase OS=Phytophthora ramorum
PE=3 SV=1
Length = 999
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 261/750 (34%), Positives = 380/750 (50%), Gaps = 116/750 (15%)
Query: 55 KSLLLGWFEPLKEAVEAEQKAHQARSKKQQASI-APNVDSLPAAKVAVIVMHKMMSLVME 113
K L+ W ++ V+AEQK +A ++I P + L +A M+ M+++ +
Sbjct: 147 KELIRKWMPQTEKYVDAEQKKIKAGKHSTDSNIYGPALMLLKPDVLAATGMNIMLNMCLM 206
Query: 114 NEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVN 173
+G + ++ A+ +G A+++E+ K EA + N N D +K F
Sbjct: 207 EAKG-PKFIKLALAMGKAVQEEIITRK-------------EAMAKRN-NGDADK---FYL 248
Query: 174 GLIKRKKLKEVHVVLKQ--EEVSPWSRAAQAKLGSRLIELLIETAYV-------HSPVNQ 224
+ KL+ + +K + V W + Q K+G+ +++ + T YV +P
Sbjct: 249 NATEYIKLESLKTRMKDYIDTVGGWDKRLQLKVGAAVVDCIQRTCYVPNEFGDVSTPELC 308
Query: 225 SADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQ-----CDPLVLAGLEKCAKHXXXXX 279
+A P PAF H + + GVIQ D ++ +
Sbjct: 309 AAKGLPAPEPAFIHNYVFDRN-------RRAGVIQIHQKMADTVLATSPDANVLPWTARY 361
Query: 280 XXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTK 339
+ W G GG+L L + IMR S Q D ++ +G+ M + AL+++ +
Sbjct: 362 LPMLVPPRPWDGIVNGGYLKLRTKIMRQRDSAWQMDCVQ--RGD-MGGILTALNLMADVP 418
Query: 340 RRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYR-VRKAK---- 394
IN +L+VV +W GGN L +VPLPD P + + K+ Y+ VRK +
Sbjct: 419 WVINKEVLNVVLQVWEDGGNFGDLPTRTDVPLPD-PESPEFKEDPALYYKNVRKNQAHMM 477
Query: 395 ------------------------KMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLD 430
++N E HS RCDT KL VA + KDE YYP+N+D
Sbjct: 478 TPYVMWVQTACKSKRLLLGGWWIEQLNREFHSLRCDTLYKLQVAEEFKDEPALYYPYNMD 537
Query: 431 FRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGR 490
FRGR YP+ P+LNHLGSDL R LL F + +PLG+ GLRW+KIHLAN++ G++K S+D R
Sbjct: 538 FRGRVYPIPPNLNHLGSDLSRSLLIFRDRKPLGEHGLRWMKIHLANVF--GVDKCSFDER 595
Query: 491 LGFVENHIHDIFDSADNPV--NGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLP 548
+ F + H+ + SA +P+ + WW A+ PF L C L A+ S P S++P
Sbjct: 596 VVFADAHLDKVMASASDPLGEGDSAWWKGADYPFLALGVCFELKRAIESPDPTQYESNIP 655
Query: 549 IHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKD-PST 607
IHQDGSCNGLQHYAALGRD VNLV +P+DVY +A +V + D+ D PS
Sbjct: 656 IHQDGSCNGLQHYAALGRDRRGGEQVNLVPAPRPSDVYMGVATQVMAKVEHDAEVDLPSV 715
Query: 608 FP-NALLAKV-----------------LIDQ-------------IDRKLVKQTVMTSVYG 636
A++A V L+DQ I RK+VKQTVMTSVYG
Sbjct: 716 EEVRAMIADVPDDNSQESLSRKTKLRTLLDQAQRKKNAQFLHGIITRKVVKQTVMTSVYG 775
Query: 637 VTYIGARDQIKKRLEE----KGLITDDRL---LFTAACYAAKVTLAALGEVFEAARGIMS 689
VTYIGAR QI RL E KG I D++L ++ A+CY A++T+ ++G++F +AR IM+
Sbjct: 776 VTYIGARKQISARLHETFLTKGHIMDEKLEDDIYHASCYCAELTMGSMGDLFNSARSIMA 835
Query: 690 WLGDCAKVIAYENQAVHWTTPLGLPVVQPY 719
WL CA + Q + W TPLGLPVVQPY
Sbjct: 836 WLAKCAAKVGESGQPMSWITPLGLPVVQPY 865
>B0D7Q9_LACBS (tr|B0D7Q9) DNA-directed RNA polymerase (Fragment) OS=Laccaria
bicolor (strain S238N-H82 / ATCC MYA-4686)
GN=LACBIDRAFT_248757 PE=3 SV=1
Length = 960
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 246/723 (34%), Positives = 386/723 (53%), Gaps = 77/723 (10%)
Query: 54 VKSLLLGWFEPLKEAVEAEQKAHQA-------RSKKQQASIAPNVDSLPAAKVAVIVMHK 106
++S + W + LK +E+E K A R + ++P + + A +++ I + +
Sbjct: 40 LQSWMWQWHQNLKSRLESEIKLIAAFEAKMLNRHDQTTQLLSPYLALVKADRLSYITILE 99
Query: 107 MMSLVMENEEGC---VQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNN 163
+M L + G ++ +A + IG A+E E + + ++ + + ++
Sbjct: 100 LMRL--QGSGGVNHGMKTTRALIAIGKAVEMEYKAQMCRTNDIAIPTMTGHSTNFFSVLG 157
Query: 164 DKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN 223
+ L KR+ H+ + +PWS+A ++K+G L+E L++ AYV +
Sbjct: 158 --------YSNLQKRRMAAARHMQDGEAWTTPWSQAVRSKIGGILVECLMDVAYVRRQRD 209
Query: 224 Q--SADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGL--EKCAKHXXXXX 279
+ + + +PAF H ++ G K+ G+++ +P V L ++ +
Sbjct: 210 DQVTGKSVTEDQPAFYHAYE---YVRGTKL----GILKLNPAVAERLSTDRLRETIHPRH 262
Query: 280 XXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVM-KNVKGEQMQKVFEALDILGNT 338
K W +GG+L+ + +MR S +Q+ + K + +M+ V LD+LG+T
Sbjct: 263 LPMLVPPKPWMHIRQGGYLYNKTSVMRFKESIEQETYLQKAIDDGKMELVLAGLDVLGST 322
Query: 339 KRRINGRLLDVVESIWAGGGNVAGLVDC-ENVPLPDKPPT--EDLKQIQEWKYRVRKAKK 395
RIN + +VV +W G + + + P P+ P +DL+ R + +
Sbjct: 323 PWRINKNVYEVVLKVWNSGERMGKIPPAVYDQPAPEIPENYEKDLQARSVHLQRQKSYTQ 382
Query: 396 MNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLE 455
HS+RC+ K+ +AR D Y PHNLDFRGRAYP+ PHL+H+G DLCRGLL
Sbjct: 383 GKANNHSERCNVNYKIEIARAFL-HDELYMPHNLDFRGRAYPIPPHLSHIGDDLCRGLLL 441
Query: 456 FAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWW 515
FA+ +PLG+ GL WLKIHLANLY G +K S+ R +V + DI DSA NP++G RWW
Sbjct: 442 FADAKPLGERGLWWLKIHLANLY--GYDKASFQERADWVMERLDDIADSATNPLDGKRWW 499
Query: 516 LRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVN 575
+ +DP+Q LAAC+ L AL+S P + +S LP+HQDG+CNGLQHYAALG D + A VN
Sbjct: 500 TKGDDPWQVLAACMELHAALQSEDPLAYMSTLPVHQDGTCNGLQHYAALGGDAVGAKQVN 559
Query: 576 LVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNAL-LAKVLIDQIDRKLVKQTVMTSV 634
L A ++P+DVYS + V + D+ N L +AK+L +I RK+VKQTVMT+V
Sbjct: 560 LAAGDRPSDVYSYVGRLVDQQIEADA-------ANGLEMAKLLQGKITRKVVKQTVMTTV 612
Query: 635 YGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDC 694
YGVT++GAR+QI+K+L+++ I D+ L +TAA Y AK L +G+ F A+ I +WL C
Sbjct: 613 YGVTFVGAREQIEKQLKDRHDIPDE-LCWTAASYLAKKVLTCIGDTFTGAKHIQNWLNLC 671
Query: 695 AKVIAY------------------------------ENQAVHWTTPLGLPVVQPYCKTER 724
A++I+ + +V WTTPL LP++QPY K R
Sbjct: 672 ARLISKSIAPDRFIDAIAAPKKRGRPAVAMSRFKKEQMTSVVWTTPLQLPIIQPYRKHAR 731
Query: 725 HLV 727
V
Sbjct: 732 KQV 734
>E6ZVI0_SPORE (tr|E6ZVI0) DNA-directed RNA polymerase OS=Sporisorium reilianum
(strain SRZ2) GN=sr10944 PE=3 SV=1
Length = 1551
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 248/702 (35%), Positives = 372/702 (52%), Gaps = 91/702 (12%)
Query: 87 IAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC---VQLVQAAVQIGMALEQEVRIHKFLE 143
I P + L AK+A+I + ++M M G ++ +A + +G A+E E + +
Sbjct: 623 ILPFLHLLSPAKLALITILELMR--MSGNGGVSDGMKTTRALLAVGRAIEMEYH-SEVVR 679
Query: 144 GNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEE-------VSPW 196
N + S N + + RK GLI +E+ Q+E + W
Sbjct: 680 KNPKIFS---------NAHAAQATLRK--RGLIDLAARREIKAWQMQQEEEGVLSSIPRW 728
Query: 197 SRAAQAKLGSRLIELLIETAYVH-SPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNY 255
++ +A++GS L++ L+ A V+ ++ + +PAF ++ G+K+
Sbjct: 729 TQPVRARVGSYLVQHLMHVATVNRKATDRDGVLWEEDQPAFYSTYQYLG---GKKL---- 781
Query: 256 GVIQCDPLVLAGLEKCAKHXXXXXXXXXXXX--KKWKGYDKGGHLFLPSYIMRTHGSRKQ 313
GVI+ + ++ L+K + K W +D GG+ + MR S +Q
Sbjct: 782 GVIKLNEVIAKRLDKDSIQETLHPRHLPMLVPPKPWTSHDSGGYYSVRQSAMRFKDSAEQ 841
Query: 314 QDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPL 371
++ + V ALD+LGNT +IN + DV+ +W G ++A + E + P
Sbjct: 842 GSYLRAASDNGDLDTVLAALDVLGNTSWKINKPIFDVMLEVWNSGEDLADMPPIEMDAPE 901
Query: 372 PDKPPT--EDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNL 429
P KP D+K + R+++ + HSQRCD KL +AR E FY+PHN+
Sbjct: 902 PQKPDNYDHDMKARSVYLQRLKQWNQQRASNHSQRCDVNYKLEIARAYVGER-FYFPHNM 960
Query: 430 DFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDG 489
DFRGRAYPM PHLNH+G+DLCRGLL FA+ +PLGK+GLRWL+IH++N++ G +K S+
Sbjct: 961 DFRGRAYPMPPHLNHIGNDLCRGLLMFADSKPLGKAGLRWLRIHISNVF--GYDKASFAE 1018
Query: 490 RLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALR-SSSPNSVISHLP 548
R F +H DI DS + P++GNRWWL+A+DP+QCLA+C+ L AL P + S LP
Sbjct: 1019 REQFAIDHEADIRDSVERPLDGNRWWLKADDPWQCLASCMELKAALEHPEGPEAYESSLP 1078
Query: 549 IHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTF 608
+HQDG+CNGLQHYAALG D A VNL EKPADVYS +A V ++ ++ K
Sbjct: 1079 VHQDGTCNGLQHYAALGGDLAGAKQVNLSRGEKPADVYSGVADLVIKVLDDEAAK----- 1133
Query: 609 PNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACY 668
LA +L ++ RK+VKQTVMT+VYGVT+IGA++Q+ ++L ++G + + LF AA +
Sbjct: 1134 -GDRLASILQGKVTRKVVKQTVMTTVYGVTFIGAKNQVMRQLADRGDVPAED-LFAAASH 1191
Query: 669 AAKVTLAALGEVFEAARGIMSWLGDCAKVIAY---------------------------- 700
AKV ++ +G +F A+ I WL AKVIA
Sbjct: 1192 LAKVIMSCIGNLFSGAQKIQDWLSFSAKVIAKSIPAQRLEEATRPYMPSETALKRADARG 1251
Query: 701 --------------ENQAVHWTTPLGLPVVQPYCKTERHLVS 728
+ +V WTT LGLPVVQPY K+++ VS
Sbjct: 1252 FSRDPAKADRIVKEQMTSVIWTTALGLPVVQPYRKSKKKQVS 1293
>I2FMF3_USTH4 (tr|I2FMF3) DNA-directed RNA polymerase OS=Ustilago hordei (strain
Uh4875-4) GN=UHOR_12740 PE=3 SV=1
Length = 1536
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 247/703 (35%), Positives = 370/703 (52%), Gaps = 93/703 (13%)
Query: 87 IAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC---VQLVQAAVQIGMALEQEVRIHKFLE 143
I P + +P +K+A+I + ++M M G ++ +A + +G A+E E +
Sbjct: 598 ILPFLRLVPVSKLALITILEIMR--MSGNGGVADGMKTTRALLAVGRAIEMEYHSDVVRK 655
Query: 144 GNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEE-------VSPW 196
+ Q N + + RK GLI E+ KQ+E + W
Sbjct: 656 NPRIFQ----------NAHTAQTVLRK--RGLINLAARNEIRAWQKQQEEEGVLSSIPKW 703
Query: 197 SRAAQAKLGSRLIELLIETAYV-HSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNY 255
++A +A++GS L++ L+ A V ++ + +PAF ++ G+K+
Sbjct: 704 TQAVRARVGSYLVQHLMHVANVSRKATDRDGVLWEEDQPAFYSTYQYLG---GKKL---- 756
Query: 256 GVIQCDPLVLAGLEKCAKHXXXXXXXXXXXX--KKWKGYDKGGHLFLPSYIMRTHGSRKQ 313
GVI+ + ++ L+K + K W +D GG+ + MR S +Q
Sbjct: 757 GVIKLNEVIAQRLDKDSMQETLHPRHLPMLVPPKPWTSHDSGGYYSVRQSAMRYKDSAEQ 816
Query: 314 QDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGL--VDCENVP 370
++ + + ALD+LGNT +IN + DV+ IW G + AG+ VD E P
Sbjct: 817 GSYLRAASDTGDVDTILAALDVLGNTSWKINKPIFDVMLEIWNSGKDTAGMPPVDMEQ-P 875
Query: 371 LPDKPPT--EDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHN 428
P KP D+K + R+++ + HSQRCD KL +AR E FY+PHN
Sbjct: 876 EPQKPDNYNHDMKARSVYLQRLKQWNQQCASNHSQRCDVNYKLEIARAYLGER-FYFPHN 934
Query: 429 LDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYD 488
+DFRGRAYPM PHLNH+G+DLCRGLL FA+ +PLGK+GLRWL+IH++N++ G +K S+
Sbjct: 935 MDFRGRAYPMPPHLNHIGNDLCRGLLMFADAKPLGKTGLRWLRIHISNVF--GYDKASFG 992
Query: 489 GRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEAL-RSSSPNSVISHL 547
R F +H DI DS + ++G RWWL+A+DP+QCLAAC+ L AL P + S+L
Sbjct: 993 EREQFAIDHEADIRDSVERTLDGQRWWLKADDPWQCLAACMELKAALDHPDGPEAYESNL 1052
Query: 548 PIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPST 607
P+HQDG+CNGLQHYAALG D A VNL ++PADVYS +A V ++ ++ K
Sbjct: 1053 PVHQDGTCNGLQHYAALGGDLAGAKQVNLSRGDRPADVYSGVADLVIKMLDEEAAK---- 1108
Query: 608 FPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAAC 667
LA +L ++ RK+VKQTVMT+VYGVT+IGA++Q+ ++L +G + + LF AA
Sbjct: 1109 --GERLATILQGKVTRKVVKQTVMTTVYGVTFIGAKNQVMRQLAARGDVPAED-LFQAAS 1165
Query: 668 YAAKVTLAALGEVFEAARGIMSWLGDCAKVIAY--------------------------- 700
+ AK+ ++ +G +F A+ I WL AKVIA
Sbjct: 1166 FLAKIIMSCIGNLFSGAQKIQDWLIFSAKVIAKSIPSQRVEEATRPYQPSETNLKRADAR 1225
Query: 701 ---------------ENQAVHWTTPLGLPVVQPYCKTERHLVS 728
+ +V WTT LGLPVVQPY KT++ +S
Sbjct: 1226 GYSRDPAKADRIVKEQMTSVIWTTALGLPVVQPYRKTKKRQIS 1268
>D2JWV0_9TREE (tr|D2JWV0) DNA-directed RNA polymerase OS=Filobasidiella depauperata
PE=3 SV=1
Length = 1181
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 241/697 (34%), Positives = 367/697 (52%), Gaps = 97/697 (13%)
Query: 94 LPAAKVAVIVMHKMMSLVMENEEGCV---QLVQAAVQIGMALEQEVRIH----------- 139
LP K+A+I + ++M M G + ++++ V +G A+E E R
Sbjct: 415 LPVDKLALITILEIMR--MAGSGGIIDGMKVLRGMVAVGKAVETEFRAETIKNVAGIDSY 472
Query: 140 ---KFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPW 196
+ ++ S++ + + + N + ++ ++ + +K++ W
Sbjct: 473 HWMRTIDPQTQKPSRQLISSVWKKIGNQAGESQRHISSSSNSEDMKDLWT-------PAW 525
Query: 197 SRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDI--RPAFRHGFKPQSRSPGQKILKN 254
SR Q +GS L++ L++ A V + + +PAF H ++ R K
Sbjct: 526 SRMIQLGVGSELVDALLKVAKVKREATNAVTGEKVVEEQPAFTHAYE-YVRG------KC 578
Query: 255 YGVIQCDPLV---LA----GLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLF---LPSYI 304
GVI+ +P+V LA G+ KH W+ +D GG+L L +
Sbjct: 579 LGVIKLNPVVAERLANDDIGVVIHPKHLPMLVPPL-----PWRAHDNGGYLMHSGLTVPV 633
Query: 305 MRTHGSRKQQDVMKNV-KGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGL 363
MR S +QQ +K + ++ VF LD+L +T +IN ++ DVV W G +A +
Sbjct: 634 MRYKESLEQQKWLKAAAEAGHLEPVFHGLDVLSSTPWQINRKVFDVVLEAWNQGHAIADI 693
Query: 364 V---DCENVPLPDKP-PTEDLKQIQE-WKYRVRKAKKMNLERHSQRCDTELKLSVARKMK 418
+ + PDKP P Q++ + +++K + + H++RC + +AR
Sbjct: 694 PPSKEMADYEFPDKPEPANQDPQLRLLYVEKMKKVRAQQRKDHAERCKFNYNIEIARSYL 753
Query: 419 DEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLY 478
+D FY PHN+DFRGRAYP+ PHL+ +G DLCRGLL F +PLG +GL+WLKIHLAN+Y
Sbjct: 754 -KDTFYLPHNMDFRGRAYPIPPHLSPVGDDLCRGLLTFGTKKPLGLTGLKWLKIHLANVY 812
Query: 479 AGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSS 538
G +K S+ R F ++ +IFDSA+NP+ GNRWWL+AEDP+QCLAAC L+ ALRSS
Sbjct: 813 --GYDKASFGERAKFAADNEKEIFDSAENPLTGNRWWLKAEDPWQCLAACFELTAALRSS 870
Query: 539 SPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMR 598
P + S LP+HQDG+CNG+QHYAALG D A AVNL A ++PAD+Y+ + V+ ++
Sbjct: 871 DPAAYESALPVHQDGTCNGMQHYAALGGDVRGAKAVNLEAGDRPADIYTGVVDIVNKVIA 930
Query: 599 RDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITD 658
D + +A ++ + RK+VKQTVMT+VYGVT++GARDQI K+L +G I
Sbjct: 931 EDQRQCHE------VASLIKGPLGRKVVKQTVMTTVYGVTFVGARDQIAKQLNTRGDIAP 984
Query: 659 DRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYE----------------- 701
+ +F + Y AK L +G++F A+ IM WL A++I+
Sbjct: 985 EH-IFAVSSYIAKTVLNCIGDLFSGAKAIMDWLTTSARLISRSVSSQRLQEAANCFSTST 1043
Query: 702 --------------NQAVHWTTPLGLPVVQPYCKTER 724
AV WTTPLGLPVVQPY K +
Sbjct: 1044 KSGKAASSRAAREFMSAVIWTTPLGLPVVQPYRKAHK 1080
>M2R3M4_CERSU (tr|M2R3M4) DNA-directed RNA polymerase OS=Ceriporiopsis
subvermispora B GN=CERSUDRAFT_57977 PE=3 SV=1
Length = 966
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 243/731 (33%), Positives = 388/731 (53%), Gaps = 91/731 (12%)
Query: 54 VKSLLLGWFEPLKEAVEAE-------QKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHK 106
++S + GW + L++ ++AE ++ + + + S++P + L K+++I + +
Sbjct: 46 LQSWMWGWHQKLQKRLQAEIENLVEEERKLGGKYQGVKTSLSPFLTLLKPEKLSLITILE 105
Query: 107 MMSL-VMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSL-QSKKTEADTE--ENLN 162
+M+L ++ +A + +G A+E E + + N ++ QS+ DT L
Sbjct: 106 LMNLHGTGGVSDGMKTARALLGVGRAVELEHKAQMCKKNNIAIPQSQFARQDTSLFTRLG 165
Query: 163 NDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPV 222
+ R+ + RK +++ ++ S WS+ + K+G L++ L++ A + +
Sbjct: 166 YRDLQARR----VAARKYMEDA-----EDWTSDWSQLVRVKVGGFLVDCLMDVATITRSM 216
Query: 223 N--QSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXX 280
+ + +PAF H ++ G K+ GVI+ +P+V E+ AK
Sbjct: 217 TDPNGEEIYSEEQPAFFHSYE---YVRGHKL----GVIKLNPVVA---ERMAKDRIKNTL 266
Query: 281 X-----XXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFEALDI 334
K W G D+GG+++ + MR S +Q + +++ ++ V+ ALD+
Sbjct: 267 HPRHLPMLVKPKPWLGPDQGGYMYNRTTAMRYKDSVEQANYLRHASAAGNLELVYAALDV 326
Query: 335 LGNTKRRINGRLLDVVESIWAGGGNVAGLVDC-ENVPLPDKPPTEDLKQ----IQEWKYR 389
LG+T IN R+ D+V ++W G + + ++P P++P + Q I +++
Sbjct: 327 LGSTPWNINRRIFDIVLTVWNSGKRMCKMPPVVSDIPEPERPENYETDQQARAIYLQRHK 386
Query: 390 VRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDL 449
+ +K N HS RC K+ +AR D + PHN+DFRGRAYP+ PHL+H+G DL
Sbjct: 387 LYAQQKAN--NHSDRCSVNYKIEIARAFLG-DTIFMPHNVDFRGRAYPVPPHLSHIGDDL 443
Query: 450 CRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPV 509
RGLL F E +PLG+ G WLK+HLANLY G +K S+ R+ FVE H+ DIFDS D+P+
Sbjct: 444 SRGLLLFGEAKPLGERGFWWLKVHLANLY--GYDKGSFPERIAFVEAHLDDIFDSVDHPL 501
Query: 510 NGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDEL 569
+G WW +A+DP+QCLA C+ L A+ S P+ LPIHQDG+CNGLQHYAALG D
Sbjct: 502 DGRMWWTKADDPWQCLATCMELKAAIESGDPHKYECALPIHQDGTCNGLQHYAALGGDTQ 561
Query: 570 EAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQT 629
AA VNL ++P+DVY+ +A V +R D K +A +L ++ RK+VKQT
Sbjct: 562 GAAQVNLAVTDRPSDVYTYVADMVEGRIREDVAKGDK------VAMLLQGKVARKVVKQT 615
Query: 630 VMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMS 689
VMT+VYGVTYIGAR QI+K+L +G I + + A+ Y AK L ++G++F A+ I
Sbjct: 616 VMTTVYGVTYIGARAQIEKQLASRGDIPAEE-CWAASSYLAKHVLGSIGDLFRGAKDIQL 674
Query: 690 WLGDCAKVIAY------------------------------------ENQAVHWTTPLGL 713
W CA++IA + +V WTTPLGL
Sbjct: 675 WFTSCARLIAKSIPPERIPHACGLVEEEKKKGRPTAKKHPVVRMKAEQMTSVVWTTPLGL 734
Query: 714 PVVQPYCKTER 724
P+VQPY +R
Sbjct: 735 PIVQPYRTVKR 745
>J8PP58_SACAR (tr|J8PP58) DNA-directed RNA polymerase OS=Saccharomyces arboricola
(strain H-6 / AS 2.3317 / CBS 10644) GN=SU7_0976 PE=3
SV=1
Length = 1351
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 246/672 (36%), Positives = 358/672 (53%), Gaps = 86/672 (12%)
Query: 88 APNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----QLVQAAVQIGMALEQEVRIHKFLE 143
P + + K+ VI + +++ L N G V + +A + +G A+E E R + L
Sbjct: 497 GPYLTLIDPGKMCVITILELLKL---NSTGGVIEGMRTARAVISVGKAIEMEFRSEQVL- 552
Query: 144 GNKSLQSKKTEADTEENLNNDKEKQRKFVN---GLIKRKKLKEVHVVLKQEEVSPWSRAA 200
K+E+ T ++N + +K V + + ++++ ++ W +
Sbjct: 553 --------KSESQTFRDVNKKSPEFKKLVQNAKSVFRSSQIEQSKIL--------WPQNI 596
Query: 201 QAKLGSRLIELLIETAYVHSPVNQSADTPPDIR-----PAFRHGFKPQSRSPGQKILKNY 255
+A++GS LI +LI A V Q D + PAF HG++ + G K+
Sbjct: 597 RAQIGSVLISMLIHVAKVSV---QGVDPITKAKVHGEAPAFAHGYQYHN---GSKL---- 646
Query: 256 GVIQCDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQ 313
GV++ ++ L E+ K W + GG+ + S ++RT S +Q
Sbjct: 647 GVLKIHKTLIHQLNGERLIASVQPQLLPMLVEPKSWINWRSGGYHYTQSTLLRTKDSPEQ 706
Query: 314 QDVMKNV-KGEQMQKVFEALDILGNTKRRINGRLLDVVESIW---AGGGNVAGLVDCENV 369
+K + + +V++ L++LGNT +N ++ DVV +W G ++ G D +
Sbjct: 707 VAYLKAASENGDIDRVYDGLNVLGNTPWTVNRKVFDVVSQVWNKREGFLDIPGAQDEMVL 766
Query: 370 PLPDKPPTEDLKQIQEWKYRVRK-AKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHN 428
P P P D ++ WK V+ A K + +R S RCDT KL +AR E Y+PHN
Sbjct: 767 P-PAPPRNSDPSILRTWKLEVKTIANKFSSDR-SNRCDTNYKLEIARAFLGEK-LYFPHN 823
Query: 429 LDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYD 488
LDFRGRAYP+ PH NHLG+D+ RGLL F G+ LG SGL+WLKIHL+NL+ G +KL +
Sbjct: 824 LDFRGRAYPLSPHFNHLGNDMSRGLLIFWHGKKLGPSGLKWLKIHLSNLF--GFDKLRLE 881
Query: 489 GRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLP 548
R+ F E+H+ DI DSA+NP+ G WW A+ P+Q LA C L+E ++ +P ISH P
Sbjct: 882 DRVSFTESHLEDIKDSAENPLTGQGWWKTADKPWQALATCFELNEVMKMDNPEDFISHQP 941
Query: 549 IHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTF 608
IHQDG+CNGLQHYAALG D A VNLV +KP DVY+ +A V + + K
Sbjct: 942 IHQDGTCNGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVARLVQKRLEIAAEKGDEN- 1000
Query: 609 PNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDR---LLFTA 665
AK+L D+I RK+VKQTVMT+VYGVTY+GA QI K+L I DDR L F+
Sbjct: 1001 -----AKILQDKITRKVVKQTVMTNVYGVTYVGATFQIAKQLSP---IFDDRKESLDFSK 1052
Query: 666 ACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI-----------AYEN-------QAVHW 707
Y K A+ E+F +A I WLG+ AK I +++N +V W
Sbjct: 1053 --YLTKHVFGAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSVIW 1110
Query: 708 TTPLGLPVVQPY 719
TTPLGLP+VQPY
Sbjct: 1111 TTPLGLPIVQPY 1122
>C5FXP3_ARTOC (tr|C5FXP3) DNA-directed RNA polymerase OS=Arthroderma otae (strain
ATCC MYA-4605 / CBS 113480) GN=MCYG_07902 PE=3 SV=1
Length = 1375
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 244/721 (33%), Positives = 366/721 (50%), Gaps = 88/721 (12%)
Query: 53 RVKSLLLGWF--------EPLKEAVEAEQKAHQARSKKQQASIAPNVDSL-PAAKVAVIV 103
R+ + + W+ E L+ A +E K + ++ P + ++ P+ AV +
Sbjct: 401 RLNAFMYQWYQGVLGKIKEELELAKRSESKKKLTPEESERYEYIPFLLAIGPSKLAAVTI 460
Query: 104 MHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLN- 162
+ + S+ + ++L IG A++ E I + QS EA+TE
Sbjct: 461 LSVLGSIGSSGMDKGIKLSSLFTHIGRAVKDEYIIET------TRQSAVNEAETENEAYY 514
Query: 163 -NDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSP--WSRAAQAKLGSRLIELLIETAYVH 219
N +Q K N K + + H E P W + + K+G+ L +L TA +
Sbjct: 515 LNKTFRQMKVYNSTGKFRSYMQKHT----EGRPPVHWPTSTEIKIGALLSSMLFSTAEI- 569
Query: 220 SPVNQSADTPPDIR----PAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK----- 270
P + ++R PAF+H ++ Q N G +Q V+ L K
Sbjct: 570 -PTSHKDPVTEEVRYVNEPAFQHVYQLQKG-------HNVGYVQLHEKVVERLRKEPSGN 621
Query: 271 -CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT-HGSRKQQDVMKNVKGEQMQKV 328
AKH + W +GG L P ++RT H + Q + + ++++
Sbjct: 622 LLAKHLPMVSPP-----RPWVSNTQGGFLTQPVQVVRTRHDDAQNQYLQAASERGDLEEL 676
Query: 329 FEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKPPTEDLKQIQEWK 387
++ L ILG T +IN + DV+ W G VA +V N+ P+KP +D + ++ +
Sbjct: 677 YKGLTILGKTGWKINRPVFDVMLEAWNSGEEVANIVAANLNITEPEKPDADDREAVKAYY 736
Query: 388 YRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGS 447
+A + HSQRC ++ +AR +E FY PHN+DFRGRAYP+ P+ N +G+
Sbjct: 737 RAKTRADNKKMGNHSQRCYLNFQMEIARAYLNE-SFYLPHNMDFRGRAYPLPPYFNQMGA 795
Query: 448 DLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADN 507
D CRGLL F+EGR LG+SGLRWL+IHL+N++ G +K S+ R F +H+ DI DSA+N
Sbjct: 796 DNCRGLLLFSEGRVLGESGLRWLRIHLSNVF--GFDKASFQEREQFSIDHVDDILDSANN 853
Query: 508 PVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRD 567
+ G RWWL+A DPFQCLAAC+ L AL P +SHLP+HQDGSCNGLQHYAALG D
Sbjct: 854 GLKGRRWWLKAADPFQCLAACVELKNALSLPDPTKYVSHLPVHQDGSCNGLQHYAALGGD 913
Query: 568 ELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNK-DPSTFPNALLAKVLIDQIDRKLV 626
+ A VNL ++P+D+Y+ +A V + D+ DP +AK++ +I RK+V
Sbjct: 914 AIGARQVNLEPGDRPSDIYTAVAEHVKASIASDAKAGDP-------IAKLMDGKITRKVV 966
Query: 627 KQTVMTSVYGVTYIGARDQIKKRLEEK-GLITDDRLLFTAACYAAKVTLAALGEVFEAAR 685
KQTVMT+VYGVT+IGA Q++++LE+ + + + A + ++ +AL +F A
Sbjct: 967 KQTVMTNVYGVTFIGATRQVRRQLEDHYPELAETDEISKCAVHVSRAIFSALNSMFSGAH 1026
Query: 686 GIMSWLGDCAKVIAYE---------------------------NQAVHWTTPLGLPVVQP 718
I WLGDCA I N +V WTTPL LPVVQP
Sbjct: 1027 DIQFWLGDCANRITRSLNPSQIEEIRKELEAPSKTDIAKKLKFNNSVIWTTPLKLPVVQP 1086
Query: 719 Y 719
Y
Sbjct: 1087 Y 1087
>C5DNP3_LACTC (tr|C5DNP3) DNA-directed RNA polymerase OS=Lachancea thermotolerans
(strain ATCC 56472 / CBS 6340 / NRRL Y-8284)
GN=KLTH0G18744g PE=3 SV=1
Length = 1289
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 240/691 (34%), Positives = 366/691 (52%), Gaps = 80/691 (11%)
Query: 66 KEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----QL 121
K A + + + K + P + + K+ VI + +++ L N G + +
Sbjct: 416 KTAQDTSLSPQEKKQNKARQEYGPYLTLVDPEKMCVITILELLKL---NSTGGIIEGMRT 472
Query: 122 VQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKL 181
+A + +G A+E E R L+ E ++ D K+ +++R +
Sbjct: 473 ARAVISVGKAIEMEFRAEMLLKN-------------ESHVFKDVNKKSHEFKLMVQRARA 519
Query: 182 KEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVH----SPVNQSADTPPDIR---P 234
+ +++ +V W + A+AK+GS LI +LI A V PV T I+ P
Sbjct: 520 TFRSIKIEESKVL-WPQEARAKIGSILISMLIHVAKVKVEGVDPV-----TNEKIKGEAP 573
Query: 235 AFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGY 292
AF HG++ + G K+ GV++ ++ L E+ + W +
Sbjct: 574 AFSHGYQYHN---GSKL----GVLKIHRSLIHQLNGERLVAAVQPQLLPMLVKPRAWNSW 626
Query: 293 DKGGHLFLPSYIMRTHGSRKQQDVMKNVK-GEQMQKVFEALDILGNTKRRINGRLLDVVE 351
+ GG+ + S ++R+ S +Q +K V + V+ L++LG T +N ++ +V+
Sbjct: 627 NSGGYYYTQSTLIRSKDSPEQVAYLKAVSDAGAIDNVYRGLNVLGETPWTVNRKMFNVMS 686
Query: 352 SIWAGGG---NVAGLVDCENVPLPDKPPTE-DLKQIQEWKYRVRKAKKMNLERHSQRCDT 407
+W G ++ G+ E + L +PP + D +EWK + ++ S RCD
Sbjct: 687 QVWNSGKPFLDIPGIQ--EKLTLTPQPPRDADPSVHREWKLKNKELANEFSGNRSARCDA 744
Query: 408 ELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGL 467
KL +AR E FY+PHNLDFRGRAYP+ PH NHLG+D+ RGL+ F G+ LG +GL
Sbjct: 745 NYKLEIARAFLGEK-FYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLMTFWHGKRLGSTGL 803
Query: 468 RWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAA 527
RWLK+HL+NL+ G +K + R+ F E+HI DI DSA++P++G WW A+ P+Q LA
Sbjct: 804 RWLKVHLSNLF--GFDKAPLEDRVRFAEDHIDDIRDSAEHPLDGKCWWKEADKPWQALAT 861
Query: 528 CINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYS 587
C+ L+EAL+ S+P+ +SH P+HQDG+CNGLQHYAALG D A VNLV ++P DVYS
Sbjct: 862 CMELNEALKMSNPDDFVSHQPVHQDGTCNGLQHYAALGGDIEGATQVNLVPSDRPQDVYS 921
Query: 588 EIA-VRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQI 646
+A + V + + +N D + A +L D+I RK+VKQTVMT+VYGVTYIGA QI
Sbjct: 922 HVAKLVVARLEKAAANGDET-------AALLKDKIKRKVVKQTVMTNVYGVTYIGATHQI 974
Query: 647 KKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYE----- 701
K+L L D + + + Y K A++ E+FE A I WLG+CAK I+
Sbjct: 975 DKQLST--LFNDHKRSYELSKYLTKHVFASVRELFEGAHLIQDWLGECAKRISKSIRLDV 1032
Query: 702 -------------NQAVHWTTPLGLPVVQPY 719
+V WTTPLGLP+VQPY
Sbjct: 1033 DEKTLKNGNKPDFMSSVIWTTPLGLPIVQPY 1063
>D7FQU5_ECTSI (tr|D7FQU5) DNA-directed RNA polymerase OS=Ectocarpus siliculosus
GN=Esi_0208_0042 PE=3 SV=1
Length = 1167
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 258/752 (34%), Positives = 382/752 (50%), Gaps = 104/752 (13%)
Query: 54 VKSLLLGWFEPLKEAVEAEQKAHQARSKKQQASIAPNVDS-------------LPAAKVA 100
++ LL W+ LKE++E EQ+A A S L A K A
Sbjct: 322 IERLLTTWYPALKESIEREQEAVWANVTDDNKGTVKTSGSFGGRGTYGAFLVMLKADKQA 381
Query: 101 VIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEEN 160
V+VMH++++L++ + V V+A ++ ++ EV + ++ KK
Sbjct: 382 VLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNL---------MRMKK-------- 424
Query: 161 LNNDKEKQRKFVNGLIKRKKL-KEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVH 219
+ K+ QR V+ L +++ K+ L E + W AQ KLG+ LI+LLIETA
Sbjct: 425 --DGKKGQRVQVSSLRHVREVNKQAQDALDMLEDTHWPIGAQVKLGAALIKLLIETACWT 482
Query: 220 SPVNQSADTPPD-------IRPAFRHGFKPQSRSPGQKILKNY----GVIQCDPLVLAGL 268
T D GF + I+K G + P + + +
Sbjct: 483 YDKESGVVTAWDKGGAERGGGERDTEGFPMPKAAFVHDIIKGKNSRKGSLTMAPEIFSKM 542
Query: 269 --EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQ 326
E ++ W ++GG L L + IMRT G Q+ ++ ++
Sbjct: 543 VDEDISRLATPRFVPMLVPPLDWIKPNRGGFLRLRAQIMRTKGEAAQKHALRRA---DLR 599
Query: 327 KVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPT--------- 377
+V++AL+ LG + RING +LD V V L +++PLP +P
Sbjct: 600 QVYKALNCLGKVRWRINGHVLDTVMVCLRDKIAVGDLPVIKDLPLPPRPDGVTVDRLGRL 659
Query: 378 --------EDLKQIQE-------WKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDC 422
ED + +E +K + K K+ N HS RCD ++K+ +A++ +D
Sbjct: 660 RAPVQGEHEDEEVFKERRQKHYAYKRLLEKTKQKNANMHSLRCDMKIKVDIAQEFRDH-V 718
Query: 423 FYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGI 482
Y+P+N+DFRGR YP+ P+LN LGSD RG+L F E +PLG+ GL WLK+HLANLY G
Sbjct: 719 IYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLVFDEAKPLGEKGLYWLKVHLANLY--GE 776
Query: 483 EKLSYDGRLGFVENHI----HDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSS 538
+K+S+D R+ FVE H+ ++ DSA P+ G WW A+ P+QCLA C +L+ AL S
Sbjct: 777 DKVSFDDRVAFVEKHMDESWREVRDSALRPLEGECWWKDADSPWQCLAVCADLTAALDSP 836
Query: 539 SPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMR 598
P +S LP+HQDGSCNGLQHYAALG D A VNL +P DVYS + D+++
Sbjct: 837 DPARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLSPSPEPQDVYSGVC----DVVK 892
Query: 599 RDSNKDPSTFP----------NALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKK 648
+ + ST P N +AK++ IDRK+VKQTVMTSVYGVT++GAR QI+
Sbjct: 893 KKVALEASTVPPEGASVVDLANHEIAKMVDGLIDRKVVKQTVMTSVYGVTFVGARAQIQN 952
Query: 649 RLEEKGLITDDRL----------LFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI 698
L +K + D ++ A+ Y AK T+ L E+F AR M WL ++++
Sbjct: 953 VLGDKMIGHTDESGVPSAEVEENVYKASAYVAKHTMTVLEELFTEARNTMDWLKAVSQLV 1012
Query: 699 AYENQAVHWTTPLGLPVVQPYCKTERHLVSLL 730
A E+Q + W TPLGLPV+QPY +T+ + V L
Sbjct: 1013 AKEDQPMSWITPLGLPVLQPYRRTDTYQVQTL 1044
>Q6CRZ5_KLULA (tr|Q6CRZ5) DNA-directed RNA polymerase OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=KLLA0D05247g PE=3 SV=1
Length = 1263
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 246/686 (35%), Positives = 373/686 (54%), Gaps = 71/686 (10%)
Query: 66 KEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMEN--EEGCVQLVQ 123
++ +E EQKA + + P + + K+ VI + +++ L EG ++ +
Sbjct: 390 QDLLEKEQKAPN-KQNSDRLKYGPYLLLVEPEKMCVITILELLKLQSSGGVTEG-MRTAR 447
Query: 124 AAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKE 183
A + +G ++E E R K L ++E + +N + + FV + L+
Sbjct: 448 AVLSVGRSIEMEFRSEKLL---------RSENKMFKEVNKRSHEFKMFVQN--AKTALRN 496
Query: 184 VHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVH----SPVNQSADTPPDIRPAFRHG 239
+HV +E + W +AK+GS LI +LI + V P+ + PAF H
Sbjct: 497 MHV---EENMIQWPSDVKAKIGSILISMLIHVSKVTVEGVDPITKEKVVGE--APAFCHT 551
Query: 240 FKPQSRSPGQKILKNYGVIQCDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGH 297
F+ +S G KI G+++ ++ L E+ + + W ++ GG+
Sbjct: 552 FQYRS---GTKI----GILKIHRSLVNQLSAERMTTNIQPQHLPMLVRPRPWTNWNSGGY 604
Query: 298 LFLPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAG 356
+ S ++R+ S +Q +K V + + V+E L++LGNT IN +L ++V +W
Sbjct: 605 NYSQSTLIRSRDSPEQIAYIKAVSEQGSIDNVYEGLNVLGNTPWTINEKLFNIVSEVWNT 664
Query: 357 GGNVAGLVDC----ENVPLPDKPP-TEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKL 411
G G +D +N P +P +ED ++EW+ + R+ S RCD+ KL
Sbjct: 665 G---EGFLDIPPVLDNFEFPPQPARSEDPLILKEWRNKCRQMSNEFKGFKSYRCDSNYKL 721
Query: 412 SVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLK 471
+AR E FY+PHN+DFRGRAYP+ PH NHLG+D+ R LL F G+ LG SGL+WLK
Sbjct: 722 EIARAFLGEK-FYFPHNMDFRGRAYPLAPHFNHLGNDMTRSLLIFWNGKKLGTSGLQWLK 780
Query: 472 IHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINL 531
IHLANLY G++K S++ R+ F + H+ +I +SA++P++G RWW +A+ P+Q LA CI L
Sbjct: 781 IHLANLY--GMDKCSFEERVEFADTHLKEIRESAEHPLDGTRWWTKADKPWQFLATCIEL 838
Query: 532 SEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAV 591
+EAL+ +P + ISH P+HQDG+CNGLQHYAALG D A VNLV ++P DVY+ +A
Sbjct: 839 NEALKLDNPENFISHQPVHQDGTCNGLQHYAALGGDIEGARQVNLVPSDRPQDVYAFVAK 898
Query: 592 RVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLE 651
V +R N S A +L D I RK+VK+TVMT+VYGVT++GA DQI K L+
Sbjct: 899 LV---TKRLEN---SAAAGDEQAAILKDLISRKVVKRTVMTNVYGVTFVGAADQIMKELD 952
Query: 652 EKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYE-------NQ- 703
+ ++ + Y AK A++ E+F AA I WLG+CAK I+ NQ
Sbjct: 953 QYFDKPEESNELSR--YLAKHVFASIRELFHAAHLIQDWLGECAKKISKSVRLDFDLNQS 1010
Query: 704 ----------AVHWTTPLGLPVVQPY 719
+V WT+PLGLPVVQPY
Sbjct: 1011 KTINSSDLMTSVIWTSPLGLPVVQPY 1036
>M5EA10_MALSM (tr|M5EA10) Genomic scaffold, msy_sf_10 OS=Malassezia sympodialis
ATCC 42132 GN=MSY001_2299 PE=4 SV=1
Length = 1312
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 248/722 (34%), Positives = 389/722 (53%), Gaps = 75/722 (10%)
Query: 54 VKSLLLGWFEPLKEAVEAEQKAHQARSKKQQAS-----IAPNVDSLPAAKVAVIVMHKMM 108
+++ + W+ L+E + + + ++K Q AS + P + LP +K+A+IV+ ++M
Sbjct: 432 LQAWMWDWYRKLEETLRKDMERLARQTKHQLASSMDMQLYPFLCLLPPSKMAMIVILELM 491
Query: 109 SLVMENEEGC---VQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDK 165
M+ G ++ +A + IG A+E E + + +K E +
Sbjct: 492 R--MQGISGVADGIKTTRALITIGKAIENEY--------SAVMMNKHPEIFIQARHAQQM 541
Query: 166 EKQRKFVNGLIKRKKLKEVHVVLKQEEVSP----WSRAAQAKLGSRLIELLIETAYV-HS 220
QR VN L R+ +K K E ++ W++ +A++GS L+ L+ A V
Sbjct: 542 LGQRNLVN-LAMRRDIKAWQERCKDENIASNIPKWTQIIRARVGSYLVHQLLSVATVKRQ 600
Query: 221 PVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK--CAKHXXXX 278
++ + + +PAF ++ G+K+ GVI+ + +V L+K +
Sbjct: 601 AYDREGELWEEEQPAFYSAYE---YIQGKKL----GVIRLNEVVSQRLDKESVRETLHPR 653
Query: 279 XXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQ-MQKVFEALDILGN 337
+ W +D GG+ + + MR S +Q ++ ++ V LD+LGN
Sbjct: 654 HLPMLVPPRPWLTHDSGGYFSVKTSAMRYKDSVEQSSYLRAASANNGLEVVLAGLDVLGN 713
Query: 338 TKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKPPTEDLKQIQEWKYRVRKAKKM 396
T +N + DVV +W G +A L E P P++PP +D+K + R+R+ +
Sbjct: 714 TAWNVNREVFDVVLQVWNSGEALADLPPAEMTDPEPERPPPDDIKAKGIYLQRLRQWNSI 773
Query: 397 NLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEF 456
HSQRCD KL +AR E FY+PHN+DFRGRAYP+ PHLNH+G+DLCRGLL+F
Sbjct: 774 RASNHSQRCDINYKLEIARSFLGEK-FYFPHNMDFRGRAYPIPPHLNHIGNDLCRGLLKF 832
Query: 457 AEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWL 516
AE +PLG++GLRWL IHLAN++ G +K S+ R F + H + DSA P+ G RWWL
Sbjct: 833 AEAKPLGEAGLRWLHIHLANVW--GYDKASFAEREEFTKRHADLVKDSATRPLEGERWWL 890
Query: 517 RAEDPFQCLAACINLSEALR-SSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVN 575
+A+DP+QCLA CI L++A + P + S LP+HQDG+CNGLQHYAALG D A VN
Sbjct: 891 QADDPWQCLATCIELNKAWNYADGPEAFPSQLPVHQDGTCNGLQHYAALGGDLQGAKQVN 950
Query: 576 LVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVY 635
L ++PADVY+ +A V + + + + T A++L ++ RK+VKQTVMT+VY
Sbjct: 951 LRGGDRPADVYTGVAELVIEQLSKRAEAGDET------AQLLCGKVTRKVVKQTVMTTVY 1004
Query: 636 GVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCA 695
GVT+IGA++Q+ ++L ++G + + L++AA Y AKV + +G +F A I WL A
Sbjct: 1005 GVTFIGAKNQVMRQLADRGDVPAEE-LWSAASYLAKVIMDCIGNLFSGANLIQDWLTVSA 1063
Query: 696 KVIAY-----------------------------ENQAVHWTTPLGLPVVQPYCKTERHL 726
++IA + +V WT+ LGLPVVQPY K ++H
Sbjct: 1064 RLIAKSIPPERIAQAQLRTDKAGKRSSSTREGREQMTSVIWTSALGLPVVQPYRKIKKHQ 1123
Query: 727 VS 728
++
Sbjct: 1124 IT 1125
>A8QAZ2_MALGO (tr|A8QAZ2) DNA-directed RNA polymerase OS=Malassezia globosa (strain
ATCC MYA-4612 / CBS 7966) GN=MGL_3857 PE=3 SV=1
Length = 1358
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 251/733 (34%), Positives = 396/733 (54%), Gaps = 87/733 (11%)
Query: 54 VKSLLLGWFEPLKEAV--EAEQKAHQAR---SKKQQASIAPNVDSLPAAKVAVIVMHKMM 108
+++ + W++ L+ A+ + E+ Q R + A + P + LPA+K+A+IV+ ++M
Sbjct: 443 LQAWMWDWYQKLEVALRKDIERLGRQTRHAVASSMDAQLYPFLCLLPASKMAMIVILEIM 502
Query: 109 SLVMENEEGC---VQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDK 165
M+ G ++ +A + +G A+E E + + +K E +
Sbjct: 503 R--MQGISGVADGIKTTRALITVGKAIETEY--------SAVMLNKHPEIFVQARAAQQM 552
Query: 166 EKQRKFVNGLIKRKKLKEVHVVLKQEE----VSPWSRAAQAKLGSRLIELLIETAYVH-S 220
+R ++ L R+ LK ++E V W++ +A++GS L++ L++ A VH
Sbjct: 553 LGKRSLID-LAARRDLKAWQERCREENIETNVPKWTQIIRARVGSFLVQHLLDVATVHRK 611
Query: 221 PVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK--CAKHXXXX 278
++ + + +PAF ++ G+K+ GVI+ + +V L+K +
Sbjct: 612 AYDRDGELWEEDQPAFYSAYE---YIQGKKL----GVIRLNEVVSQRLDKESVRETLHPR 664
Query: 279 XXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNV-KGEQMQKVFEALDILGN 337
+ W +D GG+ + + MR S +Q ++ + ++ V LD+LGN
Sbjct: 665 HLPMLVPPRPWLSHDSGGYYSMKTSAMRYKDSVEQSSYLRAASENHGLEVVLAGLDVLGN 724
Query: 338 TKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKPPTEDLKQIQEWKYRVRKAKKM 396
T +N + DVV IW G + L E P P++PP +D+K + R+R+ +
Sbjct: 725 TAWNVNKEVFDVVLQIWNSGEALGDLPPAEMTDPEPERPPPDDIKAKGIYLQRLRQWNTI 784
Query: 397 NLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEF 456
HSQRCD KL +AR +E FY+PHN+DFRGRAYP+ PHLNH+G+DLCRGLL+F
Sbjct: 785 RSSNHSQRCDINYKLEIARSFLNER-FYFPHNMDFRGRAYPIPPHLNHIGNDLCRGLLKF 843
Query: 457 AEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWL 516
AE +PLG+ GLRWL+IHLAN++ G +K S+ R F +H DI DSA N +G RWWL
Sbjct: 844 AEAKPLGEKGLRWLRIHLANVW--GYDKASFAEREQFTIDHEADIRDSATNAYHGKRWWL 901
Query: 517 RAEDPFQCLAACINLSEAL-RSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVN 575
+A+DP+QCLA CI L++A P + S LP+HQDG+CNGLQHYAALG D A VN
Sbjct: 902 QADDPWQCLATCIELTKAWDYPDGPEAFPSQLPVHQDGTCNGLQHYAALGGDLQGAKQVN 961
Query: 576 LVAKEKPADVYSEIA-VRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSV 634
L ++PADVY+ +A + + + RR DP+ A++L ++ RK+VKQTVMT+V
Sbjct: 962 LRGGDRPADVYTGVAELVIEQLNRRAEEGDPT-------AQLLRGKVTRKVVKQTVMTTV 1014
Query: 635 YGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDC 694
YGVT+IGA++Q+ ++L ++G T ++TAA Y AKV + +G++F A I WL
Sbjct: 1015 YGVTFIGAKNQVMRQLVDRG-DTPAEEVWTAASYLAKVIMDCIGDLFSGANMIQDWLTIT 1073
Query: 695 AKVIAY---------------------------------------ENQAVHWTTPLGLPV 715
A++IA + +V WT+ LGLPV
Sbjct: 1074 ARMIAKSIPPERVPYAQMKVTRKGSKADPEAHTKRPSVTSREGREQMTSVIWTSALGLPV 1133
Query: 716 VQPYCKTERHLVS 728
VQPY + ++H ++
Sbjct: 1134 VQPYRRIKKHQIT 1146
>B7GAR5_PHATC (tr|B7GAR5) DNA-directed RNA polymerase OS=Phaeodactylum tricornutum
(strain CCAP 1055/1) GN=RpoT PE=3 SV=1
Length = 1188
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 253/798 (31%), Positives = 395/798 (49%), Gaps = 142/798 (17%)
Query: 50 NLPRVKSLLLGWFEPLKEAVEAEQKAHQAR---------SKKQQASIAPNVDSLPAAKVA 100
+L V+ +L W++PLK +E+ QKA+ + +K+ P + SLP K+A
Sbjct: 294 SLSLVQRHVLQWYQPLKHEIESLQKAYIFKEQDPEGVVLTKRAANVYGPFICSLPPEKLA 353
Query: 101 VIVMHKMMSLVMENE----EGCVQLVQAAVQIGMALEQEVRIHKFL-------------- 142
VI H+ + + N A +IG A+EQEV I + L
Sbjct: 354 VICAHEAIMSGLSNPGVDGRDGTAFTAVARRIGDAVEQEVVIQRMLHRRFKESQARHSTQ 413
Query: 143 -------------EGNKSLQSKKTEADTEENLNNDKEKQ-----------------RKFV 172
EG+ L + K + D + + K + ++
Sbjct: 414 DPNRILPKPEEEVEGDVELSTDKIDEDMNDGNATTRSKSSTGTEDVHKWAYAASHLKNYL 473
Query: 173 NGLIKRK-----------KLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSP 221
+ + RK ++ +L+ +E W+ + + +LG+ L ++L+ A V
Sbjct: 474 DEISYRKPSVKKRLVIEYAIRRARTILENDEA--WTESQKIQLGAVLFQVLLNKANVRID 531
Query: 222 VNQSADTPPDIRPAFRHGFKPQSRSPGQKIL----KNYGVIQCDPLVLAGLEKCAKHXXX 277
Q AF + S+ Q I+ + + ++ D L G +
Sbjct: 532 GKQEK--------AFTYEKFWISKQKVQSIVSMNDRLHKMLVSDKLQSFGTTTTRQ---- 579
Query: 278 XXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGN 337
K W D+GG+ L + ++R HG Q++V++NV + VF+ L+ LG
Sbjct: 580 --KPMIVPPKPWSRPDEGGYKMLRTELLRYHGCNMQKEVLQNV---DLSIVFDGLNALGR 634
Query: 338 TKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWK---------- 387
RIN R+L V + W + + ++ PLP++P +Q Q W+
Sbjct: 635 VPWRINQRVLTVAQRCWDNNIPLGDIPSKDDNPLPEEP-LHPKRQEQFWEPETPGYESYV 693
Query: 388 --YRV--------RKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYP 437
YR+ R+ K+ N++ S RC LKL A K K+ + ++P+N+DFRGRAYP
Sbjct: 694 EEYRLYRESWNKFRRVKQRNMDLRSLRCSAMLKLDQAEKFKEFEEIFFPYNMDFRGRAYP 753
Query: 438 MHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENH 497
+ PHL+++GSDLCRG+L+FAE +PLG GL WLK+HLAN G +K+S+D R+ FV+++
Sbjct: 754 VPPHLSNVGSDLCRGVLKFAEAKPLGPRGLYWLKVHLANF--AGKDKMSFDDRVKFVDDN 811
Query: 498 IHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNG 557
+ + SA++P G RWW+ EDPFQ LA C+ + +A+ +P S + LP+H DGSCNG
Sbjct: 812 LEQVRLSAEDPFAGERWWMSLEDPFQGLATCLEIIDAIDCGNPESFLCSLPVHMDGSCNG 871
Query: 558 LQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRD----------------- 600
LQHYAALGRD + AVNL A ++P DVY + +H+++RR
Sbjct: 872 LQHYAALGRDSVGGKAVNLCAYDEPQDVYVGV---MHEVVRRVAAEAERQLDFDTSDLES 928
Query: 601 -SNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKK----RLEEKGL 655
S K AK++ IDR +VK+TVMTSVYGVTYIGAR QI++ +LE +G
Sbjct: 929 LSRKQKKELSYNRAAKLVNGLIDRGVVKRTVMTSVYGVTYIGARQQIQEKIISKLEAQGH 988
Query: 656 ITDD--RLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGL 713
D+ +F A Y A +T+ +G++F AR M+WL CA++I + W +P+GL
Sbjct: 989 DVDEMSNEIFQACGYVASLTMEVMGDLFTGARETMNWLTTCARMITQHGFPLAWVSPIGL 1048
Query: 714 PVVQPY-CKTERHLVSLL 730
P +QPY K +V+LL
Sbjct: 1049 PAIQPYRQKKAATIVTLL 1066
>J7S7Y3_KAZNA (tr|J7S7Y3) DNA-directed RNA polymerase OS=Kazachstania naganishii
(strain ATCC MYA-139 / BCRC 22969 / CBS 8797 / CCRC 22969
/ KCTC 17520 / NBRC 10181 / NCYC 3082) GN=KNAG0E03120
PE=3 SV=1
Length = 1276
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 237/695 (34%), Positives = 366/695 (52%), Gaps = 73/695 (10%)
Query: 60 GWFEPLKEAVEA--EQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEG 117
G LK+ +E + +A A+ +A AP + + K+ VI + +++ L N G
Sbjct: 392 GMLPILKKEIELCRQMQATAAKGHSTRAEYAPYLTLVTPEKMCVITILEILKL---NSTG 448
Query: 118 CV----QLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVN 173
+ + +A + +G A+E E R + L K E+ + +N +K V
Sbjct: 449 GITEGMRTARAVISVGQAVEMEFRSEQLL---------KNESRMFKEVNKKSNTFKKIVR 499
Query: 174 GLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVH----SPVNQSADTP 229
+ E+ KQ+ + W +A +AK+GS L+ +LI A V P+ + +
Sbjct: 500 SAKSAFRAMEIE---KQKLL--WPQAIRAKVGSILVSMLIRIADVTVEGTDPITK--EKV 552
Query: 230 PDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGL--EKCAKHXXXXXXXXXXXXK 287
PAF H ++ + G K+ G+++ ++ L E+ +
Sbjct: 553 YGKTPAFSHSYQYHN---GVKL----GIVKIHKSLINQLNGERLVASVQPQLLPMLVKPR 605
Query: 288 KWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQ-MQKVFEALDILGNTKRRINGRL 346
+WK + GG+ + S ++R+ +Q ++ + KV++ L++LGNT +N +
Sbjct: 606 EWKNWKSGGYFYSQSTLVRSRDCPEQLAYLEAASNSNAIDKVYDGLNVLGNTAWTVNRNI 665
Query: 347 LDVVESIWAGGGNVAGLVDCENVP--LPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQR 404
+VV +W G + + + LP P D I EW+ + R S R
Sbjct: 666 FNVVSKVWNEGKPFLEIPGTQEILELLPPPPKGSDPAVINEWRTKNRYLSNEYSANRSMR 725
Query: 405 CDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGK 464
CD KL +AR E FY+PHN+DFRGRAYP+ PH NHLG+D+ RGLL F +G+ LG
Sbjct: 726 CDLNYKLEIARAFLGEK-FYFPHNVDFRGRAYPLSPHFNHLGNDMSRGLLIFWKGKKLGS 784
Query: 465 SGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQC 524
GL+WLK+HL+NLY G++K+S D R+ F+E+ + ++ DSA++P+NG WW +A+ P+Q
Sbjct: 785 LGLKWLKVHLSNLY--GVDKVSLDDRVAFIESQLDEVKDSAEDPLNGRGWWKKADKPWQA 842
Query: 525 LAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPAD 584
LA C+ L+EAL+ +P +SH P+HQDG+CNGLQHYAALG D A VNL+ P D
Sbjct: 843 LATCMELNEALKLDNPEDFVSHQPVHQDGTCNGLQHYAALGGDMEGAEQVNLIPGAMPKD 902
Query: 585 VYSEIA--VRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGA 642
VYS +A VR + + DP +AK L+D+++RK+VKQTVMT VYGVT +GA
Sbjct: 903 VYSHVANIVRSRLQVLVEQENDP-------MAKFLVDKLNRKVVKQTVMTHVYGVTLVGA 955
Query: 643 RDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI---- 698
QI K++ + +D R + Y AK AA+ E F+ A I WLG+C K I
Sbjct: 956 TLQIDKQIGD--YFSDHRESLKYSKYLAKHVFAAIRESFKGAHLIQDWLGECCKRISKSV 1013
Query: 699 -------AYEN-------QAVHWTTPLGLPVVQPY 719
+++N ++ WTTPLGLP+VQPY
Sbjct: 1014 RLDVDEKSFKNGDKLDFMTSIIWTTPLGLPIVQPY 1048
>M2X4M7_GALSU (tr|M2X4M7) DNA-directed RNA polymerase OS=Galdieria sulphuraria
GN=Gasu_13440 PE=3 SV=1
Length = 1125
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 251/729 (34%), Positives = 376/729 (51%), Gaps = 74/729 (10%)
Query: 51 LPRVKSLLLGWFEPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSL 110
L + L+L W PL A++ EQ+ + + K ++ L AK+A+I + + + L
Sbjct: 304 LSPAQRLILSWLSPLAFAIKREQQ--RLKVKISLTKDESHLLRLEPAKLALITIQETLRL 361
Query: 111 VMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQ-- 168
+ +EG L +++G A++ + + K LQ ++ +T EN D
Sbjct: 362 TVPRKEGYPYL-SLCLEVGKAVQTQCNAEELERLRKKLQYEQVHQETMENKQVDNTNTTL 420
Query: 169 ----RKFVNGLIKRKKLKEVHVVLKQEE--------------------VSPWSRAAQAKL 204
+ R +L ++ +LK+ E + W + ++
Sbjct: 421 TESSESKESSNSFRIRLHQLKKLLKRNENDKNGHRPYINLFAYRLTGNAAFWDKLTTLRV 480
Query: 205 GSRLIELLIETAYVHSP-VNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPL 263
GS L+++L++ A V A + AF H R G K+ G++ C +
Sbjct: 481 GSYLVDMLLKNAPTQQVLVRTKASSDSQFVSAFWHK---TVRGNGNKL---QGLVGCRDI 534
Query: 264 VLAGLEKCAKHXXXX----XXXXXXXXKKWKGYDKGGHLFLPSYIMRT-HGSRKQQDVMK 318
V L + + K W G GG+L + S +MR H R Q + ++
Sbjct: 535 VYDILSRDLSNPFLNPLPRLRPMVVVPKPWTGPKTGGYLRIRSDLMRCEHSHRSQWNALR 594
Query: 319 NVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKP--- 375
+ KV+E L+ LG T ++N ++L+V E +W GG +AGLV+ E + +P
Sbjct: 595 TA---NLSKVYEGLNALGATPWKVNTKILEVAEELWRRGGGIAGLVNRERIDVPKINFND 651
Query: 376 ----PTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDF 431
P ++ QI + +R+AKK ERH+ C TE+ L AR+ D FY PHN+DF
Sbjct: 652 FRLLPRNEMTQI---RGEIREAKKAVAERHALTCQTEIILQEAREFAKYDVFYLPHNMDF 708
Query: 432 RGRAYPMHPHLNHLGSDLCRGLLEFAE-GRPLGKSGLRWLKIHLANLYAGGIEKLSYDGR 490
RGRAYP+ L+H+ SDL RGLL FA G+PLG+ G+ WLK+H+ANL G +K +++ R
Sbjct: 709 RGRAYPIPSTLHHMSSDLHRGLLMFASPGKPLGERGVYWLKVHIANL--AGQDKATFEDR 766
Query: 491 LGFVENHIHDIFDSADNPVNGN--RWWLRAEDPFQCLAACINLSEAL-RSSSPNSVISHL 547
+ + ENH +I A +P++ N WW EDPFQ LAAC+ + A + +S + S +
Sbjct: 767 VRWTENHSLEIIQVAQDPLDPNNLEWWSTREDPFQFLAACVEFANAASQGNSMSHYCSSV 826
Query: 548 PIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPST 607
PI DGSCNGLQHYAAL RD A VNL+ +KP DVYS + RV ++ +D+ +
Sbjct: 827 PIQMDGSCNGLQHYAALARDCEGAFKVNLLPCDKPQDVYSAVCDRVRVMVEKDAERGLEE 886
Query: 608 FPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAAC 667
AK+ + + RK+VKQTVMTSVYGVT IGAR QI+ RL E LI + +F +
Sbjct: 887 ------AKLALKCLSRKVVKQTVMTSVYGVTLIGARLQIENRLREAKLI-EKEWIFKVSS 939
Query: 668 YAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPY-------C 720
Y A TL ++G +FE A M WL +CA+ IA+ QAV W TPLGLP+ QPY
Sbjct: 940 YLASRTLESIGNLFEVADRTMEWLSECAQKIAHTKQAVSWITPLGLPIYQPYRSKVRLDV 999
Query: 721 KTERHLVSL 729
KT +VS+
Sbjct: 1000 KTAMQIVSM 1008
>D4B1W3_ARTBC (tr|D4B1W3) DNA-directed RNA polymerase OS=Arthroderma benhamiae
(strain ATCC MYA-4681 / CBS 112371) GN=ARB_02444 PE=3
SV=1
Length = 1305
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 228/666 (34%), Positives = 345/666 (51%), Gaps = 71/666 (10%)
Query: 95 PAAKVAVIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTE 154
P+ AV ++ + S+ + ++L IG A++ E +E + ++ +
Sbjct: 382 PSKLAAVTILSVLGSIGSSGMDKGIKLSSLFTNIGRAVKDEY----IIETTRRSAIEEAQ 437
Query: 155 ADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIE 214
++ E N +Q K N K + + H K + W + + K+G+ L +L
Sbjct: 438 SENEVYYLNKTFRQMKVYNSTGKFRSYMQKHT--KDQPPVHWPASTEIKIGALLSSMLFS 495
Query: 215 TAYVHS----PVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK 270
TA + + PV + + PAF+H ++ Q N G +Q V+ L K
Sbjct: 496 TAEIPTSHKDPVTEKVTYAKE--PAFQHVYQLQKG-------HNVGYVQLHEKVVERLRK 546
Query: 271 ------CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT-HGSRKQQDVMKNVKGE 323
AKH + W ++GG L P+ ++RT H + Q +
Sbjct: 547 EPSGNLLAKHLPMVSTP-----RPWVSNNQGGFLTQPTQVVRTRHDDAQSQYLQAASDRG 601
Query: 324 QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKPPTEDLKQ 382
+ ++++ L ILG T +IN + DV+ W G VA +V N+ +KP ED +
Sbjct: 602 DLDELYKGLTILGKTGWKINRPVFDVMLEAWNSGEEVANIVAANLNLAELEKPDAEDHEA 661
Query: 383 IQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHL 442
++ + +A + HSQRC ++ +AR +E FY PHN+DFRGRAYP+ P+
Sbjct: 662 VKAYYRAKTRADNKKMGNHSQRCYLNFQMEIARAYLNE-SFYLPHNMDFRGRAYPLPPYF 720
Query: 443 NHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIF 502
N +G+D CRGLL F+EGR LG+SGLRWL+IHL+N++ G +K S+ R F +H+ DI
Sbjct: 721 NQMGADNCRGLLLFSEGRVLGESGLRWLRIHLSNVF--GFDKASFQEREQFAIDHVEDIL 778
Query: 503 DSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYA 562
DSA+N + G RWWL+A DPFQCLAAC+ L AL P +SHLP+HQDGSCNGLQHYA
Sbjct: 779 DSANNGLKGKRWWLKAADPFQCLAACVELKNALSLPDPTKYVSHLPVHQDGSCNGLQHYA 838
Query: 563 ALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNK-DPSTFPNALLAKVLIDQI 621
ALG D + A VNL ++P+D+Y+ +A V + D+ DP +AK++ +I
Sbjct: 839 ALGGDAIGARQVNLEPGDRPSDIYTAVAEHVKASIASDAKAGDP-------IAKLMDGKI 891
Query: 622 DRKLVKQTVMTSVYGVTYIGARDQIKKRLEEK-GLITDDRLLFTAACYAAKVTLAALGEV 680
RK+VKQTVMT+VYGVT+IGA Q+++++E+ + + + A + ++ +AL +
Sbjct: 892 TRKVVKQTVMTNVYGVTFIGATRQVRRQIEDHYPELAESDEISKCAVHVSRAIFSALNSM 951
Query: 681 FEAARGIMSWLGDCAKVIAYE---------------------------NQAVHWTTPLGL 713
F A I WLGDCA + N +V WTTPL L
Sbjct: 952 FSGAHDIQFWLGDCANRVTRSLNPSQIEEIRKELDSPSKTDLSKKLKFNNSVIWTTPLKL 1011
Query: 714 PVVQPY 719
PVVQPY
Sbjct: 1012 PVVQPY 1017
>G8ZR00_TORDC (tr|G8ZR00) DNA-directed RNA polymerase OS=Torulaspora delbrueckii
(strain ATCC 10662 / CBS 1146 / NBRC 0425 / NCYC 2629 /
NRRL Y-866) GN=TDEL0C00530 PE=3 SV=1
Length = 1321
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 237/667 (35%), Positives = 358/667 (53%), Gaps = 78/667 (11%)
Query: 98 KVAVIVMHKMMSLVMENEEGCV----QLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKT 153
K+ VI + +++ L N G V + +A + +G A+E E R + L K+
Sbjct: 479 KMCVITILELLKL---NSTGGVIEGMRTARAVIAVGKAIEMEFRSEQLL---------KS 526
Query: 154 EADTEENLNNDKEKQRKFVN---GLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIE 210
E +++N + +K+V + K++E VV W +AA+AK+GS +I
Sbjct: 527 ELQIFKDVNRKSHEFKKYVQRAKNSFRSIKIEESKVV--------WPQAARAKIGSIMIS 578
Query: 211 LLIETAYVH----SPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLA 266
+LI A V PV + PAF HG++ + G K+ GV++ ++
Sbjct: 579 MLIHVAKVDLEGIDPVTKQKVHGE--APAFSHGYQYHN---GSKL----GVLKIHRSLIH 629
Query: 267 GL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGE- 323
L E+ + WK ++ GG+ + S ++R+ S +Q +K V
Sbjct: 630 QLNGERLVASVQPQLLPMLVKPRPWKSWNSGGYYYTQSSLIRSKDSPEQMAYLKAVSNAG 689
Query: 324 QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGN---VAGLVDCENVPLPDKPPTEDL 380
+ V++ L++LG T +N R+ DV+ +W G + + G+ + ++ LP P D
Sbjct: 690 AIDTVYQGLNVLGETAWTVNRRVFDVMSEVWNSGKDFLEIPGIQEKLDL-LPAPPRESDP 748
Query: 381 KQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHP 440
+EWK + ++ S RCD+ KL +AR E FY+PHNLDFRGRAYP+ P
Sbjct: 749 SVHREWKLKNKEIANKFSSNRSVRCDSNYKLEIARAFLGEK-FYFPHNLDFRGRAYPLSP 807
Query: 441 HLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHD 500
H NHLG+D+ RGLL F +G+ LG GL+WLK+HL+NL+ G +K R+ + E H+ D
Sbjct: 808 HFNHLGNDMSRGLLIFWKGKRLGPRGLKWLKVHLSNLF--GFDKAPLADRIAYAEAHLKD 865
Query: 501 IFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQH 560
+ SA++P+ G+ WW++A+ P+Q LA CI ++EA + +P ISH P+HQDG+CNGLQH
Sbjct: 866 VKRSAEDPLAGDGWWMKADKPWQALATCIEINEAYKLPNPEDFISHQPVHQDGTCNGLQH 925
Query: 561 YAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQ 620
YAALG D A VNLV ++P DVY+ +A V + + K A+ L D+
Sbjct: 926 YAALGGDIEGATQVNLVPNDRPQDVYAHVAKLVQARLEAAAAKGDEQ------AETLKDK 979
Query: 621 IDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLL-FTAACYAAKVTLAALGE 679
I RK+VKQTVMT+VYGVTY+GA QI+K+L I DDR + Y K AA+ E
Sbjct: 980 ITRKVVKQTVMTNVYGVTYVGATFQIEKQLSH---IFDDRTYSLELSKYLTKHVFAAVRE 1036
Query: 680 VFEAARGIMSWLGDCAKVI-----------AYEN-------QAVHWTTPLGLPVVQPYCK 721
+F A I WLG+CAK I +++N +V WTTPLGLP+VQPY +
Sbjct: 1037 LFHGAHLIQDWLGECAKRISKSIRLDVDEKSFKNGNKPDFMSSVIWTTPLGLPIVQPYRE 1096
Query: 722 TERHLVS 728
+ V+
Sbjct: 1097 ASKKQVT 1103
>G1PD86_MYOLU (tr|G1PD86) DNA-directed RNA polymerase OS=Myotis lucifugus PE=3 SV=1
Length = 1219
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/534 (39%), Positives = 297/534 (55%), Gaps = 26/534 (4%)
Query: 195 PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKN 254
PW +LG +L E+L++T + S + Q DT I P H + QS +
Sbjct: 555 PWPLTVVVQLGKQLAEVLVQTVKMPSNLAQQQDTQKLI-PVLYHVYSFQS-------FRQ 606
Query: 255 YGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXX---KKWKGYDKGGHLFLPSYIMRT-HGS 310
G+++ P + E A+ W G L P+ +MR+ G+
Sbjct: 607 IGILKPHPAFIQLQETAAERTMTFESAEVPMLCPPLPWTSPHSGAFLLSPTKLMRSLEGT 666
Query: 311 RKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGG--NVAGLVDCEN 368
+ Q +++ ++ +AL LGN R+NGR+LD+V +I+ G +
Sbjct: 667 IQHQRLLEGCPPTELHGALDALTQLGNCAWRVNGRVLDLVLTIFNAKGCPRLGVPSPASE 726
Query: 369 VPLPDK---PPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYY 425
P P K P ++ E + + + K+ E HS R D +LS+A+ ++ F+
Sbjct: 727 APRPSKHRLPANASPERKTELRRELARCLKVAREMHSLRTDALYRLSLAQHLRHR-VFWL 785
Query: 426 PHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKL 485
PHN+DFRGR YP PH NHLGSDL R LLEFA+GRPLG GL WLKIHL NL G ++
Sbjct: 786 PHNMDFRGRTYPCPPHFNHLGSDLARALLEFAQGRPLGPHGLNWLKIHLVNL-TGLKKRE 844
Query: 486 SYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVIS 545
S RL F + + DI DSAD P+ G +WW+ A++P+Q LA C+ ++ A+R+ +P + IS
Sbjct: 845 SLQARLAFADEIMDDILDSADQPMTGRKWWMEADEPWQALACCMEIARAVRAPNPAAYIS 904
Query: 546 HLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDP 605
H P+HQDGSCNGLQHYAALGRD + AA+VNLV + P DVYS +A +V R+D+ +
Sbjct: 905 HFPVHQDGSCNGLQHYAALGRDSVGAASVNLVPSDVPQDVYSSVAAQVEVFRRQDAER-- 962
Query: 606 STFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTA 665
+AKVL I RK+VKQTVMT VYGVT G R QI+KRL E + ++ A
Sbjct: 963 ----GVQVAKVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELSDFPQE-FVWQA 1017
Query: 666 ACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPY 719
+ Y + +L E+F + R I WL + A++IA AV W TPLG+P++QPY
Sbjct: 1018 SHYLVRQVFNSLQEMFSSTRAIQRWLTESARLIARSGLAVEWVTPLGIPIIQPY 1071
>L8G2U5_GEOD2 (tr|L8G2U5) DNA-directed RNA polymerase OS=Geomyces destructans
(strain ATCC MYA-4855 / 20631-21) GN=GMDG_02315 PE=3 SV=1
Length = 1438
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 248/706 (35%), Positives = 361/706 (51%), Gaps = 89/706 (12%)
Query: 88 APNVDSLPAAKVA-VIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNK 146
P + LP K+A V ++ M L + + L + IG LE E I + + N
Sbjct: 443 GPFLRYLPTDKLAAVTILTSMQCLSSHGTDKGMPLASVIMSIGANLEDE-SITETIRNNT 501
Query: 147 SLQ-----SKKTEADTEENLN---NDKEKQRKFVNGLIK--RKKLKEVHVVLKQEEVSPW 196
+ Q +K A L +K +++ + L K R H + Q W
Sbjct: 502 TKQGWQQLNKSASAGKGLGLARVIKNKRTRQQLTDSLAKLVRGDSAAKHDLSDQWNTE-W 560
Query: 197 SRAAQAKLGSRLIELLIETAYVHSPVN----QSADTPPDIRPAFRHGFKPQSRSPGQKIL 252
S +AK+GS L+ LI+TA V PV ++ + I+PAF H + KI
Sbjct: 561 SATIKAKVGSYLLSALIDTAKV--PVTMENTKTQELLTQIQPAFSHTHQ-------YKIG 611
Query: 253 KNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKK-WKGYDKGGHLFLPSYIMRTHGSR 311
K G+I + ++A L++ H + W +++GG + P+ +R G
Sbjct: 612 KKTGMILANRALVASLKREPVHSLLAKHLPMVAEPEPWSEFNQGGFISHPAKAVRIKGGD 671
Query: 312 KQQDVMKN--VKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-N 368
K Q + ++ M+++F+ LD+LG T IN + D + W G +A E
Sbjct: 672 KNQRQYQEAAIRRGDMEQMFKGLDVLGKTSWVINRPVFDTMLEAWNTGEAIANFPAEEPK 731
Query: 369 VPLPDKPP-TEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPH 427
+ P +PP ++D + ++W ++ + HS RC +L +AR +++E FY+PH
Sbjct: 732 LEYPPEPPASKDPTERRKWIRSLKTIENTRSGFHSARCFQNFQLEIARSLREEK-FYFPH 790
Query: 428 NLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSY 487
NLDFRGRAYP+ P+LNH+G+D CRGLL+F +GR LG++GL+WL++HLAN++ G +K S
Sbjct: 791 NLDFRGRAYPIPPYLNHMGADHCRGLLKFGKGRELGEAGLKWLRVHLANIH--GHDKASL 848
Query: 488 DGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHL 547
R + +HI DI+DSA NP+NG RWWL AEDP+QCLAAC+ L AL S P +SHL
Sbjct: 849 KEREQYTVDHIDDIYDSAMNPLNGRRWWLDAEDPWQCLAACLELKNALDSGDPTKFVSHL 908
Query: 548 PIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIM---RRDSNKD 604
P+HQDG+CNGLQHYAALG DE A VNL ++PADVY+ +A V++ M R++ NK
Sbjct: 909 PVHQDGTCNGLQHYAALGGDEWGARQVNLEPGDRPADVYNAVAELVNEKMAVDRKNGNK- 967
Query: 605 PSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFT 664
A L +I RK+VKQTVMT+VYGVTYIGA+ Q++K+L + F
Sbjct: 968 --------CAIWLEGKIKRKVVKQTVMTNVYGVTYIGAQAQVRKQLVAAHTDLPNEGSFN 1019
Query: 665 AAC---YAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYE-------------------- 701
+ Y A ALG +F A I WLG+CA I+
Sbjct: 1020 VSLLSGYVATKIFEALGTMFRGAHDIQFWLGECASRISTSVTPQQLDRLEHLHEEALDQR 1079
Query: 702 --------------------NQAVHWTTPLGLPVVQPYCKTERHLV 727
+V WTTPL +P+VQPY T+ V
Sbjct: 1080 VPRLNRYHISMVDAEQQLQFKSSVIWTTPLRMPIVQPYRATKSRTV 1125
>G1WZ24_ARTOA (tr|G1WZ24) DNA-directed RNA polymerase OS=Arthrobotrys oligospora
(strain ATCC 24927 / CBS 115.81 / DSM 1491)
GN=AOL_s00004g535 PE=3 SV=1
Length = 1466
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 258/742 (34%), Positives = 371/742 (50%), Gaps = 108/742 (14%)
Query: 52 PRVKSLLLGWF--------EPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIV 103
P + LL W E LK EAE + ++ P + L K+A I
Sbjct: 448 PAINPLLHRWLLAMVPLIKEELKHVEEAEASPGKP-DNFERCQYGPYLRLLSPEKLAGIT 506
Query: 104 MHKMMSLVMENEEGCVQLVQAAV-QIGMALEQEV---RIHKFLEGN---------KSLQS 150
+ ++ L ++ A++ +G +E E ++ K E K+LQ
Sbjct: 507 ITSIIKLASGWQDSTAMKASASIISVGRNVEHEYISEQLQKAFETKAGEPEYYKKKALQK 566
Query: 151 KKTEADTEENL------NNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKL 204
+ E E++L N + + K GL+ ++ WS+ +AK+
Sbjct: 567 QLAEVKNEKDLAMLIYRQNRRAEMEKDGTGLLLNER---------------WSQPVRAKV 611
Query: 205 GSRLIELLIETAYVH-SPVNQSA------DTPPDIRPAFRHGFKPQSRSPGQKILKNYGV 257
GS L+ LL + A + P N+ D D +PA HG++ G+KI GV
Sbjct: 612 GSVLVSLLFQVAKIKVRPTNKKVLKHMDKDLAID-QPALVHGYQFVG---GKKI----GV 663
Query: 258 IQCDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQD 315
I+ L E + W ++ G + F P+ ++R S +Q
Sbjct: 664 IRLHDEFSKKLMTEPLKGTTLAKQLPMIAKPRPWCAWNDGAYYFTPTRMVRVKDSLEQTM 723
Query: 316 VMKNV-KGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC--ENVPLP 372
+K K + ++F LD+LG+T IN ++ DV+ +W G A + ++V +P
Sbjct: 724 YVKEASKHGNLDRLFTGLDVLGSTAWTINQKVFDVILQVWNTGDKFADIPPTFEKDVNMP 783
Query: 373 DKP-PTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDF 431
+ P P D +K ++ + HSQRCD KL +AR +E FY+PHN+DF
Sbjct: 784 EMPQPNADAAAKAAFKIAYQEMALIRKNHHSQRCDVNFKLEIARAFYNE-VFYFPHNVDF 842
Query: 432 RGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRL 491
RGRAY M PHLNHLG+DLCRGLL+F+E +PLG+SGLRWLKIHL+NL GG +K S R
Sbjct: 843 RGRAYAMPPHLNHLGNDLCRGLLKFSEKKPLGESGLRWLKIHLSNL--GGYDKASLMARE 900
Query: 492 GFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQ 551
+ E+ + D+FDSA +P+ G RWWL +EDP+Q LA C+ L A+ S P S++P+HQ
Sbjct: 901 EWAESRMEDVFDSARDPLGGKRWWLESEDPWQMLATCMELEAAMSSKDPLKYESNMPVHQ 960
Query: 552 DGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNA 611
DG+CNGLQHYAALG D + A VNL +KP DVY+ +A V+ + D+
Sbjct: 961 DGTCNGLQHYAALGGDIVGAKQVNLEPADKPQDVYTGVADLVNQAVAEDAQNGNE----- 1015
Query: 612 LLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAK 671
LAK L+ I+RK+VKQTVMT+VYGVT+IGA++Q+K RL EKG+ DR + + Y K
Sbjct: 1016 -LAKDLLGHINRKVVKQTVMTNVYGVTFIGAKNQVKSRLMEKGVWPRDR-VDKLSIYLTK 1073
Query: 672 VTLAALGEVFEAARGIMSWLGDCAKVIA-------YENQAVH------------------ 706
+L +F A I W G+CAK I+ Y + A H
Sbjct: 1074 KIFTSLQSMFTGAHLIQKWFGECAKRISRSVSPTQYASFAEHYTGVIPTTGRQAHTKERG 1133
Query: 707 ---------WTTPLGLPVVQPY 719
WTTPLGLPVVQPY
Sbjct: 1134 KAEFMTSVVWTTPLGLPVVQPY 1155
>F2Q2T9_TRIEC (tr|F2Q2T9) DNA-directed RNA polymerase OS=Trichophyton equinum
(strain ATCC MYA-4606 / CBS 127.97) GN=TEQG_07343 PE=3
SV=1
Length = 1375
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 227/666 (34%), Positives = 345/666 (51%), Gaps = 71/666 (10%)
Query: 95 PAAKVAVIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTE 154
P+ AV ++ + S+ + ++L IG A++ E +E + ++ +
Sbjct: 452 PSKLAAVTILSVLGSIGSSGMDKGIKLSSLFTNIGRAVKDEY----IIETTRRSAIEEAQ 507
Query: 155 ADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIE 214
++ E N +Q K N K + + H K + W + + K+G+ L +L
Sbjct: 508 SENEVYYLNKTFRQMKVYNSTGKFRSYMQKHA--KDQPPVHWPASTEIKIGALLSSMLFS 565
Query: 215 TAYVHS----PVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK 270
TA + + P+ + + PAF+H ++ Q N G +Q V+ L K
Sbjct: 566 TAEIPTSHKDPITEKVTYAKE--PAFQHVYQLQKG-------HNVGYVQLHEKVVEKLRK 616
Query: 271 ------CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT-HGSRKQQDVMKNVKGE 323
AKH + W ++GG L P+ ++RT H + Q +
Sbjct: 617 EPSGNLLAKHLPMVSTP-----RPWVSNNQGGFLTQPTQVVRTRHDDAQSQYLQAASDRG 671
Query: 324 QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKPPTEDLKQ 382
+ ++++ L ILG T +IN + DV+ W G VA +V N+ +KP ED +
Sbjct: 672 DLDELYKGLTILGKTGWKINRPVFDVMLEAWNSGEEVANIVAANLNLAELEKPDAEDHEA 731
Query: 383 IQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHL 442
++ + +A + HSQRC ++ +AR +E FY PHN+DFRGRAYP+ P+
Sbjct: 732 VKAYYRAKTRADNKKMGNHSQRCYLNFQMEIARAYLNE-SFYLPHNMDFRGRAYPLPPYF 790
Query: 443 NHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIF 502
N +G+D CRGLL F+EGR LG+SGLRWL+IHL+N++ G +K S+ R F +H+ DI
Sbjct: 791 NQMGADNCRGLLLFSEGRVLGESGLRWLRIHLSNVF--GFDKASFQEREQFAIDHVEDIL 848
Query: 503 DSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYA 562
DSA+N + G RWWL+A DPFQCLAAC+ L AL P +SHLP+HQDGSCNGLQHYA
Sbjct: 849 DSANNGLKGKRWWLQAADPFQCLAACVELKNALSLPDPTQYVSHLPVHQDGSCNGLQHYA 908
Query: 563 ALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNK-DPSTFPNALLAKVLIDQI 621
ALG D + A VNL ++P+D+Y+ +A V + D+ DP +AK++ +I
Sbjct: 909 ALGGDAIGARQVNLEPGDRPSDIYTAVAEHVKASIASDAKAGDP-------IAKLMDGKI 961
Query: 622 DRKLVKQTVMTSVYGVTYIGARDQIKKRLEEK-GLITDDRLLFTAACYAAKVTLAALGEV 680
RK+VKQTVMT+VYGVT+IGA Q+++++E+ + + + A + ++ +AL +
Sbjct: 962 TRKVVKQTVMTNVYGVTFIGATRQVRRQIEDHYPELAESDEISKCAVHVSRAIFSALNSM 1021
Query: 681 FEAARGIMSWLGDCAKVIAYE---------------------------NQAVHWTTPLGL 713
F A I WLGDCA + N +V WTTPL L
Sbjct: 1022 FSGAHDIQFWLGDCANRVTRSLNPSQIEEIRKELDSPSKTDLSKKLKFNNSVIWTTPLRL 1081
Query: 714 PVVQPY 719
PVVQPY
Sbjct: 1082 PVVQPY 1087
>E4UVQ3_ARTGP (tr|E4UVQ3) DNA-directed RNA polymerase OS=Arthroderma gypseum
(strain ATCC MYA-4604 / CBS 118893) GN=MGYG_05376 PE=3
SV=1
Length = 1375
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 229/666 (34%), Positives = 345/666 (51%), Gaps = 71/666 (10%)
Query: 95 PAAKVAVIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTE 154
P+ AV ++ + S+ + ++L IG A++ E +E + ++ +
Sbjct: 452 PSKLAAVTILSVLGSIGSSGMDKGIKLSSLFTNIGRAVKDEY----IVETTRRSAIEEAQ 507
Query: 155 ADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIE 214
+ E N +Q K N K + + H K + W + + K+G+ L +L
Sbjct: 508 NENEVYYLNKTFRQMKVYNTTGKFRSYMQKHT--KDQPPVHWPASTEIKIGALLSSMLFS 565
Query: 215 TAYVHS----PVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK 270
TA + + PV ++ + PAF+H ++ Q N G +Q V+ L K
Sbjct: 566 TAEIPTSHKDPVAETVTYA--MEPAFQHVYQLQKG-------HNVGYVQLHEKVVERLRK 616
Query: 271 ------CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT-HGSRKQQDVMKNVKGE 323
AKH + W +GG L P+ ++RT H + Q +
Sbjct: 617 EPSGNLLAKHLPMVSTP-----RPWVSNTQGGFLTQPTQVVRTRHDDAQSQYLQAASDRG 671
Query: 324 QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKPPTEDLKQ 382
+ ++++ L ILG T +IN + DV+ W G VA +V N+P +KP ED +
Sbjct: 672 DLDELYKGLTILGKTGWKINRPVFDVMLEAWNSGEEVANIVAANLNLPELEKPDAEDREA 731
Query: 383 IQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHL 442
I+ + +A + HSQRC ++ +AR +E FY PHN+DFRGRAYP+ P+
Sbjct: 732 IKTYYRAKTRADNKKMGNHSQRCYLNFQMEIARAYLNE-SFYLPHNMDFRGRAYPLPPYF 790
Query: 443 NHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIF 502
N +G+D CRGLL F+EGR LG+SGLRWL+IHL+N++ G +K S+ R F +H+ +I
Sbjct: 791 NQMGADNCRGLLLFSEGRVLGESGLRWLRIHLSNVF--GYDKASFQEREQFSIDHVEEIL 848
Query: 503 DSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYA 562
DSA+N + G RWWL+A DPFQCLAAC+ L AL P +SHLP+HQDGSCNGLQHYA
Sbjct: 849 DSANNGLKGKRWWLKAADPFQCLAACVELKNALSLPDPTQYVSHLPVHQDGSCNGLQHYA 908
Query: 563 ALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNK-DPSTFPNALLAKVLIDQI 621
ALG D + A VNL ++P+D+Y+ +A V + D+ DP +AK++ +I
Sbjct: 909 ALGGDAIGARQVNLEPGDRPSDIYTAVAEHVKASIANDAKAGDP-------IAKLMDGKI 961
Query: 622 DRKLVKQTVMTSVYGVTYIGARDQIKKRLEEK-GLITDDRLLFTAACYAAKVTLAALGEV 680
RK+VKQTVMT+VYGVT+IGA Q+++++E+ + + + A + ++ +AL +
Sbjct: 962 TRKVVKQTVMTNVYGVTFIGATRQVRRQIEDHYPELAESDEISKCAVHVSRAIFSALNSM 1021
Query: 681 FEAARGIMSWLGDCAKVIAYE---------------------------NQAVHWTTPLGL 713
F A I WLGDCA + N +V WTTPL L
Sbjct: 1022 FSGAHDIQFWLGDCANRVTRSLNPSQIEEIRKELEAPSKTDLSKKLKFNNSVIWTTPLKL 1081
Query: 714 PVVQPY 719
PVVQPY
Sbjct: 1082 PVVQPY 1087
>F2SGD5_TRIRC (tr|F2SGD5) DNA-directed RNA polymerase OS=Trichophyton rubrum
(strain ATCC MYA-4607 / CBS 118892) GN=TERG_02257 PE=3
SV=1
Length = 1375
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 228/666 (34%), Positives = 345/666 (51%), Gaps = 71/666 (10%)
Query: 95 PAAKVAVIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTE 154
P+ AV ++ + S+ + ++L IG A++ E +E + ++ +
Sbjct: 452 PSKLAAVTILSVLGSIGSSGMDKGIKLSSLFTNIGRAVKDEY----IIETTRRSAIEEAQ 507
Query: 155 ADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIE 214
++ E N +Q K N K + + H K + W + + K+G+ L +L
Sbjct: 508 SENEVYYLNKTFRQMKVYNSTGKFRSYMQKHT--KDQPPVHWPASTEIKIGALLSSMLFS 565
Query: 215 TAYVHS----PVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK 270
TA + + PV + + PAF+H ++ Q N G +Q V+ L K
Sbjct: 566 TAEIPTSHKDPVTEKVTYAKE--PAFQHVYQLQKG-------HNVGYVQLHEKVVERLRK 616
Query: 271 ------CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT-HGSRKQQDVMKNVKGE 323
AKH + W ++GG L P+ ++RT H + Q +
Sbjct: 617 EPSGNLLAKHLPMVSTP-----RPWVSNNQGGFLTQPTQVVRTRHDDAQSQYLQAASDRG 671
Query: 324 QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKPPTEDLKQ 382
+ ++++ L ILG T +IN + DV+ W G VA +V N+ +KP ED +
Sbjct: 672 DLDELYKGLTILGKTGWKINRPVFDVMLEAWNSGEEVANIVAANLNLAELEKPDAEDHEA 731
Query: 383 IQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHL 442
++ + +A + HSQRC ++ +AR +E FY PHN+DFRGRAYP+ P+
Sbjct: 732 VKAYYRAKTRADNKKMGNHSQRCYLNFQMEIARAYLNE-SFYLPHNMDFRGRAYPLPPYF 790
Query: 443 NHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIF 502
N +G+D CRGLL F+EGR LG+SGLRWL+IHL+N++ G +K S+ R F +H+ DI
Sbjct: 791 NQMGADNCRGLLLFSEGRVLGESGLRWLRIHLSNVF--GFDKASFQEREQFAIDHVEDIL 848
Query: 503 DSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYA 562
DSA+N + G RWWL+A DPFQCLAAC+ L AL P +SHLP+HQDGSCNGLQHYA
Sbjct: 849 DSANNGLKGKRWWLQAADPFQCLAACVELKNALSLPDPTQYVSHLPVHQDGSCNGLQHYA 908
Query: 563 ALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNK-DPSTFPNALLAKVLIDQI 621
ALG D + A VNL ++P+D+Y+ +A V + D+ DP +AK++ +I
Sbjct: 909 ALGGDAIGARQVNLEPGDRPSDIYTAVAEHVKASIASDAKAGDP-------IAKLMDGKI 961
Query: 622 DRKLVKQTVMTSVYGVTYIGARDQIKKRLEEK-GLITDDRLLFTAACYAAKVTLAALGEV 680
RK+VKQTVMT+VYGVT+IGA Q+++++E+ + + + A + ++ +AL +
Sbjct: 962 TRKVVKQTVMTNVYGVTFIGATRQVRRQIEDHYPELAESDEISKCAVHVSRAIFSALNSM 1021
Query: 681 FEAARGIMSWLGDCAKVIAYE---------------------------NQAVHWTTPLGL 713
F A I WLGDCA + N +V WTTPL L
Sbjct: 1022 FSGAHDIQFWLGDCANRVTRSLNPSQIDEIRKELDSPSKTDLSKNLKFNNSVIWTTPLRL 1081
Query: 714 PVVQPY 719
PVVQPY
Sbjct: 1082 PVVQPY 1087
>F7FG73_MONDO (tr|F7FG73) DNA-directed RNA polymerase OS=Monodelphis domestica
GN=POLRMT PE=3 SV=2
Length = 1253
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/554 (39%), Positives = 320/554 (57%), Gaps = 38/554 (6%)
Query: 188 LKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSP 247
L QE+V W +LG++LIE+L+++ Y+ + ++ S T I P H + S
Sbjct: 584 LTQEKV--WPDVLLVRLGTQLIEILVQSIYMPNSLSPSQATKRFI-PVLYHVYSFLS--- 637
Query: 248 GQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXX---KKWKGYDKGGHLFLPSYI 304
+K G I+ P + +++ A W + G ++ P+ +
Sbjct: 638 ----IKQIGFIKPHPSFIQLVDEAAYTTLTFDVSVMPMLCPPIPWTSPNFGAYVLHPTKL 693
Query: 305 MRT-HGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGL 363
MR G+ + Q ++++ Q+ V +AL LGN ++N +LD+V SI+ GN
Sbjct: 694 MRCLDGTVQHQQLLESCPQGQLNAVLDALTQLGNCAWKVNQPVLDLVISIFNAKGNKK-- 751
Query: 364 VDCENVPLP----DKPPTEDLKQ----IQEWKYR--VRKAKKMNLERHSQRCDTELKLSV 413
+VP P PP+ +L + ++ K R + + K E +S R D KLS+
Sbjct: 752 ---LDVPPPVSEAPTPPSYELSKGASSSEKAKLRREIAQCHKTAREMYSLRMDALYKLSI 808
Query: 414 ARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIH 473
A ++D+ F++PHN+DFRGRAYP PH NHLGSD+ R +L FAEG+PLG +GL WLKIH
Sbjct: 809 AHHLRDQ-IFWFPHNMDFRGRAYPCPPHFNHLGSDMTRAILLFAEGKPLGPNGLDWLKIH 867
Query: 474 LANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSE 533
L NL G +K S RL + + DI DSADNP+ G +WW+ ++P+Q LA C+ ++
Sbjct: 868 LINL-TGLKKKESLQARLAYANEILEDILDSADNPLTGRKWWMDVDEPWQALACCMEIAN 926
Query: 534 ALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRV 593
A+RS P + ISH PIHQDGSCNGLQHYAALG+D + A +VNL+ + P DVYS +A V
Sbjct: 927 AIRSPDPTAYISHFPIHQDGSCNGLQHYAALGQDVIGATSVNLMPCDVPQDVYSGVAQLV 986
Query: 594 HDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEK 653
++ +RD+ + S +A+VL I+RKLVKQTVMT VYGVT G R QI+KRL+E
Sbjct: 987 EELRKRDAAEGKS------IAQVLEGFINRKLVKQTVMTVVYGVTKYGGRLQIEKRLKEL 1040
Query: 654 GLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGL 713
+ ++ A+ Y +++ ++LGE+F R I WL A VI+ AV W TPLGL
Sbjct: 1041 DDFPKEH-IWEASLYLSQLVFSSLGEMFSTTREIQDWLTKSAHVISKSGSAVQWVTPLGL 1099
Query: 714 PVVQPYCKTERHLV 727
P++QPY KT++ +
Sbjct: 1100 PIIQPYHKTQKMTI 1113
>G7E7S7_MIXOS (tr|G7E7S7) DNA-directed RNA polymerase OS=Mixia osmundae (strain CBS
9802 / IAM 14324 / JCM 22182 / KY 12970) GN=Mo05575 PE=3
SV=1
Length = 1375
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 237/683 (34%), Positives = 352/683 (51%), Gaps = 79/683 (11%)
Query: 92 DSLPAAKVAVIVMHKMMSLVMENEEGCVQLVQAAVQI---GMALEQEVRIHKFLEGNKSL 148
D L V+V++ H M+ CV + AV++ M L++ R LE +L
Sbjct: 498 DKLAYLTVSVLLSHNTPGAAMQKVTRCVMAIGKAVEVEHYAMKLQESHR----LELADAL 553
Query: 149 QSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRL 208
+ + EA+ + + R + + ++ ++ V WS +A++G+
Sbjct: 554 HAVR-EAEAANGVTESRVVARIWRD--VRARQGDSSREVF-------WSHQTRARIGAMC 603
Query: 209 IELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGL 268
+ L ETA + +I+PAF ++ S GQKI G+I+ + V L
Sbjct: 604 LHFLCETAKIQRSAVIDGQEIIEIQPAFVQTYQ---FSAGQKI----GIIKFNAAVTERL 656
Query: 269 EKCA--KHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGE-QM 325
+K + + W ++KG +L P ++R S +Q +K Q+
Sbjct: 657 DKDSMLSTLTPRYLPMLVPPRPWTAHNKGAYLMHPVSVLRIKDSMEQTAYLKQASDSGQL 716
Query: 326 QKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGL--VDCENVPLPDKPPTEDL--- 380
+ F +LD LG+T +N + V+ S W G + G+ D N +PP
Sbjct: 717 DEAFASLDYLGSTAWNVNRDVFGVIASAWNSGLTIGGIPVADPLNAIKDPEPPAGGFTSP 776
Query: 381 KQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHP 440
+Q + V+ A+ + +S RCD KL +AR +E FY+PHN+DFRGRAYP+ P
Sbjct: 777 RQQDTHRAEVKAAEMQRRQHYSIRCDLNYKLEIARAYLNER-FYFPHNMDFRGRAYPIPP 835
Query: 441 HLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHD 500
+L+H+G DLCRGLL FAE + LG +GLRWL +HLAN++ G +K S R F ++H+ D
Sbjct: 836 NLSHIGDDLCRGLLTFAERKRLGATGLRWLHVHLANMF--GFDKASLAAREQFAKDHLTD 893
Query: 501 IFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQH 560
IFDSAD P++G RWWL+AE+P+QCLA C LS+ALRS P S LP+ QDGSCNGLQH
Sbjct: 894 IFDSADKPLDGARWWLKAEEPWQCLATCFELSKALRSPVPEDYRSSLPVQQDGSCNGLQH 953
Query: 561 YAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRD-SNKDPSTFPNALLAKVLID 619
YAALG D A VNL+A + P+DVY+ + V + +D +NK+ LA L
Sbjct: 954 YAALGGDMAGAGQVNLIAGDAPSDVYTGVCNLVIGAVEQDAANKNE-------LALHLKG 1006
Query: 620 QIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGE 679
+I RK++KQTVMT+VYGVTYIGA QI+++L+++G + D + A Y + TL ++G
Sbjct: 1007 KITRKVIKQTVMTTVYGVTYIGASRQIERQLKDRGDV-DAEVRHKCALYLTEKTLQSIGT 1065
Query: 680 VFEAARGIMSWLGDCAKVIAY-----------------------------------ENQA 704
+F A I WL C ++I+ +
Sbjct: 1066 LFAGAAAIQLWLTTCGRLISKSIPGDRHELVKATQSKSEQNKLKKKQSSKDMLAREQMTT 1125
Query: 705 VHWTTPLGLPVVQPYCKTERHLV 727
V WTTP+GLPV QPY K +R V
Sbjct: 1126 VVWTTPIGLPVAQPYRKQQRKQV 1148
>F2RVR6_TRIT1 (tr|F2RVR6) DNA-directed RNA polymerase OS=Trichophyton tonsurans
(strain CBS 112818) GN=TESG_02898 PE=3 SV=1
Length = 1375
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 227/666 (34%), Positives = 345/666 (51%), Gaps = 71/666 (10%)
Query: 95 PAAKVAVIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTE 154
P+ AV ++ + S+ + ++L IG A++ E +E + ++ +
Sbjct: 452 PSKLAAVTILSVLGSIGSSGIDKGIKLSSLFTNIGRAVKDEY----IIETTRRSAIEEAQ 507
Query: 155 ADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIE 214
++ E N +Q K N K + + H K + W + + K+G+ L +L
Sbjct: 508 SENEVYYLNKTFRQMKVYNSTGKFRSYMQKHA--KDQPPVHWPASTEIKIGALLSSMLFS 565
Query: 215 TAYVHS----PVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK 270
TA + + P+ + + PAF+H ++ Q N G +Q V+ L K
Sbjct: 566 TAEIPTSHKDPITEKVTYAKE--PAFQHVYQLQKG-------HNVGYVQLHEKVVEKLRK 616
Query: 271 ------CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT-HGSRKQQDVMKNVKGE 323
AKH + W ++GG L P+ ++RT H + Q +
Sbjct: 617 EPSGNLLAKHLPMVSTP-----RPWVSNNQGGFLTQPTQVVRTRHDDAQSQYLQAASDRG 671
Query: 324 QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKPPTEDLKQ 382
+ ++++ L ILG T +IN + DV+ W G VA +V N+ +KP ED +
Sbjct: 672 DLDELYKGLTILGKTGWKINRPVFDVMLEAWNSGEEVANIVAANLNLAELEKPDAEDHEA 731
Query: 383 IQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHL 442
++ + +A + HSQRC ++ +AR +E FY PHN+DFRGRAYP+ P+
Sbjct: 732 VKAYYRAKTRADNKKMGNHSQRCYLNFQMEIARAYLNE-SFYLPHNMDFRGRAYPLPPYF 790
Query: 443 NHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIF 502
N +G+D CRGLL F+EGR LG+SGLRWL+IHL+N++ G +K S+ R F +H+ DI
Sbjct: 791 NQMGADNCRGLLLFSEGRVLGESGLRWLRIHLSNVF--GFDKASFQEREQFAIDHVEDIL 848
Query: 503 DSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYA 562
DSA+N + G RWWL+A DPFQCLAAC+ L AL P +SHLP+HQDGSCNGLQHYA
Sbjct: 849 DSANNGLKGKRWWLQAADPFQCLAACVELKNALSLPDPTQYVSHLPVHQDGSCNGLQHYA 908
Query: 563 ALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNK-DPSTFPNALLAKVLIDQI 621
ALG D + A VNL ++P+D+Y+ +A V + D+ DP +AK++ +I
Sbjct: 909 ALGGDAIGARQVNLEPGDRPSDIYTAVAEHVKASIASDAKAGDP-------IAKLMDGKI 961
Query: 622 DRKLVKQTVMTSVYGVTYIGARDQIKKRLEEK-GLITDDRLLFTAACYAAKVTLAALGEV 680
RK+VKQTVMT+VYGVT+IGA Q+++++E+ + + + A + ++ +AL +
Sbjct: 962 TRKVVKQTVMTNVYGVTFIGATRQVRRQIEDHYPELAESDEISKCAVHVSRAIFSALNSM 1021
Query: 681 FEAARGIMSWLGDCAKVIAYE---------------------------NQAVHWTTPLGL 713
F A I WLGDCA + N +V WTTPL L
Sbjct: 1022 FSGAHDIQFWLGDCANRVTRSLNPSQIEEIRKELDSPSKTDLSKKLKFNNSVIWTTPLRL 1081
Query: 714 PVVQPY 719
PVVQPY
Sbjct: 1082 PVVQPY 1087
>K5X592_AGABU (tr|K5X592) DNA-directed RNA polymerase OS=Agaricus bisporus var.
burnettii (strain JB137-S8 / ATCC MYA-4627 / FGSC 10392)
GN=AGABI1DRAFT_69188 PE=3 SV=1
Length = 967
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 234/683 (34%), Positives = 366/683 (53%), Gaps = 75/683 (10%)
Query: 87 IAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC---VQLVQAAVQIGMALEQEVRIHKFLE 143
++P + + ++++I + ++M L + G ++ +A + +G A+E E + +
Sbjct: 89 LSPYLSLVNPERLSLITIMEIMRL--QGSSGVADGMKTARALISVGKAVEMEYKAQMIKK 146
Query: 144 GNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAK 203
+ SK NL + + ++ K+L + +E WS+ ++K
Sbjct: 147 PDNVADSKSAGG----NLYSHAAYKN------LRDKRLAVSKEIEGEERSLGWSQVTRSK 196
Query: 204 LGSRLIELLIETAYVHSPVN-QSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDP 262
+G L++ L+E A V ++ + +++PAF H ++ S GVI+ +P
Sbjct: 197 IGGILVDCLMEVAEVERTAKLENGEKVSEMQPAFHHAYEYLRGS-------RLGVIRLNP 249
Query: 263 LVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNV 320
+V L + + W ++ GG+L+ + +MR S +QQ +K
Sbjct: 250 VVSERLATDPLKDTLHPRHLPMLVKPQPWVSHNVGGYLYSKTSVMRFKDSIEQQIYLKEA 309
Query: 321 -KGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC-ENVPLPDKPPTE 378
K QM+ V+ LD+L +T +IN ++ +VV W G + + + P P +P E
Sbjct: 310 SKHGQMELVYAGLDVLASTPWKINKKVFEVVLRTWNSGERLGKVPPAMYDGPEPVQPQVE 369
Query: 379 DLKQIQEWKYRVRKAKKMNLER---HSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRA 435
+L +++ Y + + K N + HS RC KL +AR + D FY+PHNLDFRGRA
Sbjct: 370 ELADMKKRSYYLVRQKAYNQAKANNHSDRCSVNYKLEIARAFLN-DEFYFPHNLDFRGRA 428
Query: 436 YPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVE 495
YP+ HLNH+G DLCRGLL FAE +PLG GLRWLKIH+ANLY G +K ++D R+ +V+
Sbjct: 429 YPVPAHLNHIGDDLCRGLLTFAEAKPLGVRGLRWLKIHIANLY--GYDKANFDDRVNWVD 486
Query: 496 NHIHDIFDSA----DNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQ 551
H+ I+ +A D+P WWL A DP+Q LAA I L +AL S +P + S LP+HQ
Sbjct: 487 EHLDQIYQTATRLLDDPAT-KAWWLEASDPWQFLAASIELHDALESGNPEAFESSLPVHQ 545
Query: 552 DGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNA 611
DG+CNGLQHYAALG D A VNL A +KP+DVYS + V + + +D
Sbjct: 546 DGTCNGLQHYAALGGDVQGARQVNLEASDKPSDVYSHVGAMVEEAIAKDCESGDK----- 600
Query: 612 LLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAK 671
A +L +I RK+VKQTVMT+VYGVT+IGAR+QI+K+L+++ I ++ ++AA Y A+
Sbjct: 601 -YALMLKGKITRKVVKQTVMTTVYGVTFIGAREQIEKQLKDRKDIPEEE-CWSAAAYLAR 658
Query: 672 VTLAALGEVFEAARGIMSWLGDCAKVIAY------------------------------E 701
+ L +G +F+ A+ I +WL A+++A +
Sbjct: 659 LVLGCIGNLFKGAQSIQTWLNLSARLVAKSIPEARIPELMAEAAAAKKGQLPMNRLKKEQ 718
Query: 702 NQAVHWTTPLGLPVVQPYCKTER 724
+V WTTPLGLP+VQPY K R
Sbjct: 719 MTSVIWTTPLGLPIVQPYRKIAR 741
>M7TGZ3_9PEZI (tr|M7TGZ3) Putative mitochondrial dna-directed rna polymerase
protein OS=Eutypa lata UCREL1 GN=UCREL1_3776 PE=4 SV=1
Length = 1344
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/593 (37%), Positives = 320/593 (53%), Gaps = 88/593 (14%)
Query: 196 WSRAAQAKLGSRLIELLIETAYVHSPVNQSADTP---PDIRPAFRHGFKPQSRSPGQKIL 252
W +AK+G+ L+ L+++A V+ V + +T I+PA H + G+K+
Sbjct: 467 WPIYIRAKVGAVLLGALLDSAKVNV-VREHPETKALISQIQPAMTHSIMHRR---GRKV- 521
Query: 253 KNYGVIQCDPLVLAGL------EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMR 306
GV+ + ++ + E A+H + W +DKGG L P++++R
Sbjct: 522 ---GVVLANKWLVDLMMREPRGEFLARHLPMLVEP-----EPWTRFDKGGFLNSPAHLVR 573
Query: 307 THGSRKQQDVMKNVKGEQ--MQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLV 364
T G K Q + E+ M++V + LD+LG T ++N + V+ W G +A +
Sbjct: 574 TKGGEKDQRIYAEAALERGDMEQVSKGLDVLGRTAWQVNQNVFKVMLEAWNSGEKLANIP 633
Query: 365 DCE-NVPLPDKP-PTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDC 422
N+P P +P P++D+ +EW V+ A+ + HS+RC +L +AR KD+
Sbjct: 634 PLHPNIPTPPEPAPSDDMMHRREWLKAVKAAENLKSGLHSERCFINFQLEIARAFKDQ-T 692
Query: 423 FYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGI 482
FY+PHN+DFRGRAYP+ P+LNH+G+D RGLL FA GR LG+SGLRWLK+HLAN++ G
Sbjct: 693 FYFPHNMDFRGRAYPIPPYLNHMGADHARGLLRFAVGRELGESGLRWLKVHLANVF--GY 750
Query: 483 EKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNS 542
+K S R F +++ +I DSADNP+NG RWWL+AEDP+QCLA C L AL S P
Sbjct: 751 DKASLKERESFAMDNLANIHDSADNPLNGQRWWLKAEDPWQCLATCFELKAALESPEPTK 810
Query: 543 VISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSN 602
+SH+P+ DG+CNGLQHYAALG D A VNLV ++PADVYS +A V + + D
Sbjct: 811 YVSHIPVQMDGTCNGLQHYAALGGDLWGAQQVNLVPGDRPADVYSAVANLVKENIAEDVK 870
Query: 603 KDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRL--------EEKG 654
D LAK + +I RK+VKQTVMT+VYGVT++GA+ Q+ K+L EE G
Sbjct: 871 AD------NFLAKAIDGKITRKVVKQTVMTNVYGVTFVGAKAQVLKQLDAAYPNLQEETG 924
Query: 655 LITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCA------------------- 695
+ T A Y A AL +F A I WLG+CA
Sbjct: 925 VPTS-----LVASYVATKIFKALSTMFRGAHDIQYWLGECAGRVCRALTPEQLDLLADGT 979
Query: 696 ---------------------KVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
++++ + WTTPL +PVVQPY KT +V
Sbjct: 980 PTPKPIKRRAPVKSKSKLAIDEILSSFRSTIVWTTPLRMPVVQPYRKTITRVV 1032
>L5LSH4_MYODS (tr|L5LSH4) DNA-directed RNA polymerase OS=Myotis davidii
GN=MDA_GLEAN10011467 PE=3 SV=1
Length = 1219
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/534 (38%), Positives = 297/534 (55%), Gaps = 26/534 (4%)
Query: 195 PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKN 254
PW +LG +L E+L++T + S + Q DT I P H + QS +
Sbjct: 555 PWPLTVVVQLGKQLAEVLVQTVKMPSNLAQQQDTQKLI-PVLYHVYSFQS-------FRQ 606
Query: 255 YGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXX---KKWKGYDKGGHLFLPSYIMRT-HGS 310
G+++ P + E A+ W G L P+ +MR+ G+
Sbjct: 607 IGILKPHPAFIQLQETAAERTMTFESAEVPMLCPPLPWTSPHSGAFLLSPTKLMRSLEGT 666
Query: 311 RKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGG--NVAGLVDCEN 368
+ Q +++ ++ +AL LGN R+NGR+LD+V +I+ G +
Sbjct: 667 IQHQRLLEGCPPTELHGALDALTQLGNCAWRVNGRVLDLVLTIFNAKGCPRLGVPSPASE 726
Query: 369 VPLPDK---PPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYY 425
P P K P ++ E + + + K+ E HS R D +LS+A+ ++ F+
Sbjct: 727 APRPSKHRLPANASPERKTELRRELARCLKVAREMHSLRTDALYRLSLAQHLRHR-VFWL 785
Query: 426 PHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKL 485
PHN+DFRGR YP PH NHLGSDL R LLEFA+GRPLG GL WLKIHL NL G ++
Sbjct: 786 PHNMDFRGRTYPCPPHFNHLGSDLARALLEFAQGRPLGPHGLNWLKIHLVNL-TGLKKRE 844
Query: 486 SYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVIS 545
S RL F + + DI DSAD P+ G +WW+ A++P+Q LA C+ +++A+R+ +P + +S
Sbjct: 845 SLQARLAFADEIMDDILDSADQPMTGRKWWMEADEPWQALACCMEIAKAVRAPNPAAYVS 904
Query: 546 HLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDP 605
H P+HQDGSCNGLQHYAALGRD + AA+VNLV + P DVYS +A +V R+D+ +
Sbjct: 905 HFPVHQDGSCNGLQHYAALGRDSVGAASVNLVPSDVPQDVYSSVAAQVEVFRRQDAER-- 962
Query: 606 STFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTA 665
+A VL I RK+VKQTVMT VYGVT G R QI+KRL E + ++ A
Sbjct: 963 ----GVQVATVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELSDFPQE-FVWQA 1017
Query: 666 ACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPY 719
+ Y + +L E+F + R I WL + A++IA AV W TPLG+P++QPY
Sbjct: 1018 SHYLVRQVFNSLQEMFSSTRAIQRWLTESARLIARSGLAVEWVTPLGIPIIQPY 1071
>D4DH48_TRIVH (tr|D4DH48) DNA-directed RNA polymerase OS=Trichophyton verrucosum
(strain HKI 0517) GN=TRV_06503 PE=3 SV=1
Length = 1305
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 227/666 (34%), Positives = 345/666 (51%), Gaps = 71/666 (10%)
Query: 95 PAAKVAVIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTE 154
P+ AV ++ + S+ + ++L IG A++ E +E + ++ +
Sbjct: 382 PSKLAAVTILSVLGSIGSSGMDKGIKLSSLFTNIGRAVKDEY----IIETTRRSAVEEAQ 437
Query: 155 ADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIE 214
++ E N +Q K N K + + H K + W + + K+G+ L +L
Sbjct: 438 SENEVYYLNKTFRQMKVYNSTGKFRSYMQKHT--KDQPPVHWPASTEIKIGALLSSMLFS 495
Query: 215 TAYVHS----PVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK 270
TA + + PV + + PAF+H ++ Q N G +Q V+ L K
Sbjct: 496 TAEIPTSHKDPVTEKVTYAKE--PAFQHVYQLQKG-------HNVGYVQLHEKVVERLRK 546
Query: 271 ------CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT-HGSRKQQDVMKNVKGE 323
AKH + W ++GG L P+ ++RT H + Q +
Sbjct: 547 EPSGNLLAKHLPMVSTP-----RPWVSNNQGGFLTQPTQVVRTRHDDAQSQYLQAASDRG 601
Query: 324 QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKPPTEDLKQ 382
+ ++++ L ILG T +IN + DV+ W G VA +V N+ +KP +D +
Sbjct: 602 DLDELYKGLTILGKTGWKINRPVFDVMLEAWNSGEEVANIVAANLNLAELEKPDADDHEA 661
Query: 383 IQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHL 442
++ + +A + HSQRC ++ +AR +E FY PHN+DFRGRAYP+ P+
Sbjct: 662 VKAYYRAKTRADNKKMGNHSQRCYLNFQMEIARAYLNE-SFYLPHNMDFRGRAYPLPPYF 720
Query: 443 NHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIF 502
N +G+D CRGLL F+EGR LG+SGLRWL+IHL+N++ G +K S+ R F +H+ DI
Sbjct: 721 NQMGADNCRGLLLFSEGRVLGESGLRWLRIHLSNVF--GFDKASFQEREQFAIDHVDDIL 778
Query: 503 DSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYA 562
DSA+N + G RWWL+A DPFQCLAAC+ L AL P +SHLP+HQDGSCNGLQHYA
Sbjct: 779 DSANNGLKGKRWWLQAADPFQCLAACVELKNALSLPDPTQYVSHLPVHQDGSCNGLQHYA 838
Query: 563 ALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNK-DPSTFPNALLAKVLIDQI 621
ALG D + A VNL ++P+D+Y+ +A V + D+ DP +AK++ +I
Sbjct: 839 ALGGDAIGARQVNLEPGDRPSDIYTAVAEHVKASIASDAKAGDP-------IAKLMDGKI 891
Query: 622 DRKLVKQTVMTSVYGVTYIGARDQIKKRLEEK-GLITDDRLLFTAACYAAKVTLAALGEV 680
RK+VKQTVMT+VYGVT+IGA Q+++++E+ + + + A + ++ +AL +
Sbjct: 892 TRKVVKQTVMTNVYGVTFIGATRQVRRQIEDHYPELAESDEISKCAVHVSRAIFSALNSM 951
Query: 681 FEAARGIMSWLGDCAKVIAYE---------------------------NQAVHWTTPLGL 713
F A I WLGDCA + N +V WTTPL L
Sbjct: 952 FSGAHDIQFWLGDCANRVTRSLNPSQIEEIRKELDSPSKTDLSKKLKFNNSVIWTTPLKL 1011
Query: 714 PVVQPY 719
PVVQPY
Sbjct: 1012 PVVQPY 1017
>K9I6L7_AGABB (tr|K9I6L7) DNA-directed RNA polymerase OS=Agaricus bisporus var.
bisporus (strain H97 / ATCC MYA-4626 / FGSC 10389)
GN=AGABI2DRAFT_200200 PE=3 SV=1
Length = 967
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 234/683 (34%), Positives = 366/683 (53%), Gaps = 75/683 (10%)
Query: 87 IAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC---VQLVQAAVQIGMALEQEVRIHKFLE 143
++P + + ++++I + ++M L + G ++ +A + +G A+E E + +
Sbjct: 89 LSPYLSLVNPERLSLITIMEIMRL--QGSSGVADGMKTARALISVGKAVEMEYKAQMIKK 146
Query: 144 GNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAK 203
+ SK NL + + ++ K+L + +E WS+ ++K
Sbjct: 147 LDNVADSKSAGG----NLYSHAAYKN------LRDKRLAVSKEIEGEERSLGWSQVTRSK 196
Query: 204 LGSRLIELLIETAYVHSPVN-QSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDP 262
+G L++ L+E A V ++ + +++PAF H ++ S GVI+ +P
Sbjct: 197 IGGILVDCLMEVAEVERTAKLENGEKVSEMQPAFHHAYEYLRGS-------RLGVIRLNP 249
Query: 263 LVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNV 320
+V L + + W ++ GG+L+ + +MR S +QQ +K
Sbjct: 250 VVSERLATDPLKDTLHPRHLPMLVKPQPWVSHNVGGYLYSKTSVMRFKDSIEQQIYLKEA 309
Query: 321 -KGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC-ENVPLPDKPPTE 378
K QM+ V+ LD+L +T +IN ++ +VV W G + + + P P +P E
Sbjct: 310 SKHGQMELVYAGLDVLASTPWKINKKVFEVVLRTWNSGERLGKVPPAMYDGPEPVQPQVE 369
Query: 379 DLKQIQEWKYRVRKAKKMNLER---HSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRA 435
+L +++ Y + + K N + HS RC KL +AR + D FY+PHNLDFRGRA
Sbjct: 370 ELADMKKRSYYLVRQKAYNQAKANNHSDRCSVNYKLEIARAFLN-DEFYFPHNLDFRGRA 428
Query: 436 YPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVE 495
YP+ HLNH+G DLCRGLL FAE +PLG GLRWLKIH+ANLY G +K ++D R+ +V+
Sbjct: 429 YPVPAHLNHIGDDLCRGLLTFAEAKPLGVRGLRWLKIHIANLY--GYDKANFDDRVNWVD 486
Query: 496 NHIHDIFDSA----DNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQ 551
H+ I+ +A D+P WWL A DP+Q LAA I L +AL S +P + S LP+HQ
Sbjct: 487 EHLDQIYQTATRLLDDPAT-KAWWLEASDPWQFLAASIELHDALESGNPEAFESSLPVHQ 545
Query: 552 DGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNA 611
DG+CNGLQHYAALG D A VNL A +KP+DVYS + V + + +D
Sbjct: 546 DGTCNGLQHYAALGGDVQGARQVNLEASDKPSDVYSHVGAMVEEAIAKDCESGDK----- 600
Query: 612 LLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAK 671
A +L +I RK+VKQTVMT+VYGVT+IGAR+QI+K+L+++ I ++ ++AA Y A+
Sbjct: 601 -YALMLKGKITRKVVKQTVMTTVYGVTFIGAREQIEKQLKDRKDIPEEE-CWSAAAYLAR 658
Query: 672 VTLAALGEVFEAARGIMSWLGDCAKVIAY------------------------------E 701
+ L +G +F+ A+ I +WL A+++A +
Sbjct: 659 LVLGCIGNLFKGAQSIQTWLNLSARLVAKSIPEARIPELMAEAAAVKKGQLPMNRLKKEQ 718
Query: 702 NQAVHWTTPLGLPVVQPYCKTER 724
+V WTTPLGLP+VQPY K R
Sbjct: 719 MTSVIWTTPLGLPIVQPYRKIAR 741
>G0VD01_NAUCC (tr|G0VD01) DNA-directed RNA polymerase OS=Naumovozyma castellii
(strain ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630)
GN=NCAS0C03720 PE=3 SV=1
Length = 1326
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 238/664 (35%), Positives = 355/664 (53%), Gaps = 70/664 (10%)
Query: 92 DSLPAAKVAVIVMHKM-----MSLVMENEEGCV----QLVQAAVQIGMALEQEVRIHKFL 142
DSL A + ++ KM + L+ N G V + +A + +G A+E E R + L
Sbjct: 471 DSLSAPYLLLVNPEKMCVIAILELLKLNSTGGVIEGMRTARAVISVGKAIEMEFRSEQLL 530
Query: 143 EGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQA 202
+ +E N+ + K+ L++R + ++Q ++ W +A +A
Sbjct: 531 K-------------SESNIFKEVNKKSPEFKKLVQRARQSFRSNQVEQSKIV-WPQAIRA 576
Query: 203 KLGSRLIELLIETAYV----HSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVI 258
K+GS LI LI A V PV + PAF HG++ G K+ GVI
Sbjct: 577 KIGSTLISTLIHVAKVDVKGFDPVTKQEVYGK--APAFSHGYQ---YCKGSKL----GVI 627
Query: 259 QCDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDV 316
+ ++ L E+ + W+ + GG+ + S ++R+ S +Q
Sbjct: 628 KIHRSLINQLNGERLIASVQPQLLPMLVKPRPWRNWRSGGYFYSQSTLIRSKESPEQLAY 687
Query: 317 MKNVK-GEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVP--LPD 373
+K V + + V+ L+ LG T IN ++ DV+ +W G + + ++ LP
Sbjct: 688 LKAVSDADVIPDVYTGLNALGETAWTINKKVFDVISQVWNTGDEFLEIPEIQHDMNLLPP 747
Query: 374 KPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRG 433
P D + ++WK + ++ + S RCDT KL +AR E FY+PHNLDFRG
Sbjct: 748 PPRDSDPSEFRKWKLQNKELANKISKNRSVRCDTNYKLEIARAFLGEK-FYFPHNLDFRG 806
Query: 434 RAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGF 493
RAYP+ PH NHLG+DL RGLL F +G+ LG GL WLKIHL+NLY G++K +D R+ F
Sbjct: 807 RAYPLSPHFNHLGNDLSRGLLIFWKGKKLGPHGLVWLKIHLSNLY--GMDKAPFDERVRF 864
Query: 494 VENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDG 553
VE+H+ +I +SA+NP+ +WW A+ P+QCLA CI L+EAL+ +P ISH P+HQDG
Sbjct: 865 VEDHLQEIKESAENPLTTGKWWKDADKPWQCLATCIELTEALKLDNPEEFISHQPVHQDG 924
Query: 554 SCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALL 613
+CNGLQHYAALG D A VNL+ ++P DVY+ +A V + + + + +
Sbjct: 925 TCNGLQHYAALGGDVEGAEQVNLIPHDRPQDVYAHVARLVTKRLEKAALQGDAK------ 978
Query: 614 AKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVT 673
AK+L+D+I RK+VKQ VMT+VYGVTY+GA QI+K+L + D + F + Y
Sbjct: 979 AKILVDKISRKVVKQPVMTNVYGVTYVGATFQIEKQLSK--FFPDRKECFDLSKYLTSHV 1036
Query: 674 LAALGEVFEAARGIMSWLGDCAKVI-----------AYEN-------QAVHWTTPLGLPV 715
A + E+F +A I WLG+CA I A++N +V WTTPLGLP+
Sbjct: 1037 FATIRELFHSAHLIQDWLGECANRITKSIRLDVDGKAFKNGDKPDFMSSVIWTTPLGLPI 1096
Query: 716 VQPY 719
VQPY
Sbjct: 1097 VQPY 1100
>Q75BP7_ASHGO (tr|Q75BP7) DNA-directed RNA polymerase OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=ACR224C PE=3 SV=1
Length = 1295
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 239/667 (35%), Positives = 359/667 (53%), Gaps = 74/667 (11%)
Query: 88 APNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----QLVQAAVQIGMALEQEVRIHKFLE 143
AP + + K+ VI + +++SL N G V + +A + IG A+E E R L+
Sbjct: 444 APYITLVNPEKMCVITILELLSL---NSTGGVSEGMRTTRAVLAIGKAVEMEYRSEALLK 500
Query: 144 GNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAK 203
KS+ K+ A++ E L++R K + +++ +V W +AK
Sbjct: 501 SEKSI-FKEVRANSNE------------FKKLVQRAKTTFRNTQIEESKVL-WPHNIKAK 546
Query: 204 LGSRLIELLIETAYVH----SPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQ 259
+GS LI +LI A V+ PV T PA H F+ + G K+ GV++
Sbjct: 547 VGSLLISMLIHVAKVNVKGVDPVTNK--TVYGKAPAICHTFQYRM---GSKV----GVLK 597
Query: 260 CDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVM 317
+ + ++ + + + W ++ GG+LF S ++R+ S +Q +
Sbjct: 598 LHRSLANQMSSDRLSANFQPQHLPMLVKPRPWTSWNSGGYLFTKSTLIRSKDSPEQSAYI 657
Query: 318 KNVKGEQM-QKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCEN-VPLPDKP 375
K V G+ + Q V++ L++LG T +N +L ++ +W G + ++ + LP KP
Sbjct: 658 KAVTGKGVVQNVYKGLNVLGETAWTVNKNMLHIISKVWNSGTEFLDIPPQQDELLLPAKP 717
Query: 376 PTEDLKQ-----IQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLD 430
ED + ++ WK R + S RCD KL +AR E FY+PHN+D
Sbjct: 718 RGEDGSEPEPIVLKRWKQECRFLNAEYQKHRSMRCDANYKLEIARAFIGEK-FYFPHNMD 776
Query: 431 FRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGR 490
FRGRAYP+ PH NHLG+D+ R LL F EG+ LGK GLRWLKIH+ NLY G++K +++ R
Sbjct: 777 FRGRAYPLAPHFNHLGNDMTRSLLIFWEGKRLGKEGLRWLKIHMGNLY--GLDKQTFEAR 834
Query: 491 LGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIH 550
+ F E H+ DI DSA+NP+NG WW +A+ P+QCLA C+ ++ A + S+P +SH P+H
Sbjct: 835 VAFTEAHLEDIKDSAENPLNGKGWWKKADKPWQCLATCMEINNAYKLSNPEDYVSHQPVH 894
Query: 551 QDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPN 610
QDG+CNGLQHYAALG D A VNLV +KP DVY+ +A V + + + + +
Sbjct: 895 QDGTCNGLQHYAALGGDIEGARQVNLVPSDKPQDVYAFVAKLVTERLEKAALEGDQN--- 951
Query: 611 ALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAA 670
A L + I RK+VK+TVMT+VYGVT+IGA +QI K L++ D+ + A Y
Sbjct: 952 ---AAQLKNLITRKVVKRTVMTNVYGVTFIGATNQIDKELQDA--FPDNS--YDMARYLT 1004
Query: 671 KVTLAALGEVFEAARGIMSWLGDCAKVIA--------------YENQ----AVHWTTPLG 712
K ++ E+F AA I WLG+ AK I+ +N +V WT+PLG
Sbjct: 1005 KHVFNSIRELFHAAHLIQDWLGESAKKISKSIRLDLELEKIKKLDNSIMMTSVIWTSPLG 1064
Query: 713 LPVVQPY 719
LPVVQPY
Sbjct: 1065 LPVVQPY 1071
>M9N2G7_ASHGS (tr|M9N2G7) FACR224Cp OS=Ashbya gossypii FDAG1 GN=FAGOS_FACR224C PE=4
SV=1
Length = 1295
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 239/667 (35%), Positives = 359/667 (53%), Gaps = 74/667 (11%)
Query: 88 APNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----QLVQAAVQIGMALEQEVRIHKFLE 143
AP + + K+ VI + +++SL N G V + +A + IG A+E E R L+
Sbjct: 444 APYITLVNPEKMCVITILELLSL---NSTGGVSEGMRTTRAVLAIGKAVEMEYRSEALLK 500
Query: 144 GNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAK 203
KS+ K+ A++ E L++R K + +++ +V W +AK
Sbjct: 501 SEKSI-FKEVRANSNE------------FKKLVQRAKTTFRNTQIEESKVL-WPHNIKAK 546
Query: 204 LGSRLIELLIETAYVH----SPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQ 259
+GS LI +LI A V+ PV T PA H F+ + G K+ GV++
Sbjct: 547 VGSLLISMLIHVAKVNVKGVDPVTNK--TVYGKAPAICHTFQYRM---GSKV----GVLK 597
Query: 260 CDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVM 317
+ + ++ + + + W ++ GG+LF S ++R+ S +Q +
Sbjct: 598 LHRSLANQMSSDRLSANFQPQHLPMLVKPRPWTSWNSGGYLFTKSTLIRSKDSPEQSAYI 657
Query: 318 KNVKGEQM-QKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCEN-VPLPDKP 375
K V G+ + Q V++ L++LG T +N +L ++ +W G + ++ + LP KP
Sbjct: 658 KAVTGKGVVQNVYKGLNVLGETAWTVNKNMLHIISKVWNSGTEFLDIPPQQDELLLPAKP 717
Query: 376 PTEDLKQ-----IQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLD 430
ED + ++ WK R + S RCD KL +AR E FY+PHN+D
Sbjct: 718 RGEDGSEPEPIVLKRWKQECRFLNAEYQKHRSMRCDANYKLEIARAFIGEK-FYFPHNMD 776
Query: 431 FRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGR 490
FRGRAYP+ PH NHLG+D+ R LL F EG+ LGK GLRWLKIH+ NLY G++K +++ R
Sbjct: 777 FRGRAYPLAPHFNHLGNDMTRSLLIFWEGKRLGKEGLRWLKIHMGNLY--GLDKQTFEAR 834
Query: 491 LGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIH 550
+ F E H+ DI DSA+NP+NG WW +A+ P+QCLA C+ ++ A + S+P +SH P+H
Sbjct: 835 VAFTEAHLEDIKDSAENPLNGKGWWKKADKPWQCLATCMEINNAYKLSNPEDYVSHQPVH 894
Query: 551 QDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPN 610
QDG+CNGLQHYAALG D A VNLV +KP DVY+ +A V + + + + +
Sbjct: 895 QDGTCNGLQHYAALGGDIEGARQVNLVPSDKPQDVYAFVAKLVTERLEKAALEGDQN--- 951
Query: 611 ALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAA 670
A L + I RK+VK+TVMT+VYGVT+IGA +QI K L++ D+ + A Y
Sbjct: 952 ---AAQLKNLITRKVVKRTVMTNVYGVTFIGATNQIDKELQDA--FPDNS--YDMARYLT 1004
Query: 671 KVTLAALGEVFEAARGIMSWLGDCAKVIA--------------YENQ----AVHWTTPLG 712
K ++ E+F AA I WLG+ AK I+ +N +V WT+PLG
Sbjct: 1005 KHVFNSIRELFHAAHLIQDWLGESAKKISKSIRLDLELEKIKKLDNSIMMTSVIWTSPLG 1064
Query: 713 LPVVQPY 719
LPVVQPY
Sbjct: 1065 LPVVQPY 1071
>A8NIS4_COPC7 (tr|A8NIS4) DNA-directed RNA polymerase OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)
GN=CC1G_11031 PE=3 SV=2
Length = 1341
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 236/665 (35%), Positives = 371/665 (55%), Gaps = 47/665 (7%)
Query: 54 VKSLLLGWFEPLKEAV-------EAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHK 106
++ ++ GW E LK+ V E E+ A + R K + A +AP + + ++++I + +
Sbjct: 383 LQEMMYGWHEKLKKRVAELVSQIEKEEAAGKYRLKPK-AELAPYLALVQPERLSMITILE 441
Query: 107 MMSLVMENEEGC-VQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDK 165
M L ++ +A V IG A+E E + + N+ + + DT++ ++
Sbjct: 442 AMRLCGSGGVASGMKSTRALVSIGKAVEMEYKA-RVCRKNRIVIPDVSRPDTQDVFSSLG 500
Query: 166 EKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYV-HSPVNQ 224
+ L +R+ + + +PWS+ +A++G+ L+E+L++ A V + VN+
Sbjct: 501 ------YSNLHERRLAAAKQMTAGESWTAPWSQTTRAQIGALLMEVLMQVATVPQTAVNE 554
Query: 225 -SADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXX-- 281
+ + + PAF H ++ G K+ GVI+ + V E+ AK
Sbjct: 555 ETGEVLTEEHPAFFHSYEYMR---GTKL----GVIKVNHAVS---ERIAKDVLKGTIHPR 604
Query: 282 ---XXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVM-KNVKGEQMQKVFEALDILGN 337
K W ++GG+L+ + +MR +Q+ + + ++ M+ V L++LG
Sbjct: 605 HLPMLHPPKPWVRANEGGYLYTKTPLMRYKECVEQEKYLHEAIRKGNMEAVMAGLNVLGR 664
Query: 338 TKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMN 397
T +IN ++ DVV +IW G V L + +PP E ++ ++ K+ +
Sbjct: 665 TPWKINKKIFDVVLTIWNSGEGVGKLPPAKLDEPEPQPPPEGENDVRARAIYLQHHKQWS 724
Query: 398 ---LERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLL 454
HS+RC T K+ +AR DE Y+PHNLDFRGRAYP+ PHLNH+G DL RGLL
Sbjct: 725 QNVANNHSERCSTNYKIEIARAFLDE-TIYFPHNLDFRGRAYPLPPHLNHIGDDLSRGLL 783
Query: 455 EFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRW 514
F E +PLG+ GLRW+KIHLANLY G +K +D R+ +V + + DI DSA NP+ G W
Sbjct: 784 LFQEAKPLGERGLRWMKIHLANLY--GFDKADFDERVHWVHDRLDDIKDSAKNPLTGRGW 841
Query: 515 WLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAV 574
W +A+DPFQCLA C+ L+EAL S P + S LP+HQDG+CNGLQHYAA+G D A V
Sbjct: 842 WKKADDPFQCLATCMELTEALESPDPLAYKSCLPVHQDGTCNGLQHYAAMGGDAQGAQQV 901
Query: 575 NLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSV 634
NL A ++P+DVY+ + +V ++ D+ K LA++L +I RK+VKQTVMT+V
Sbjct: 902 NLAASDRPSDVYTFVGNKVDKLVNEDAAKGDR------LAQLLQGKITRKVVKQTVMTTV 955
Query: 635 YGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDC 694
YGVT++GARDQI+ +L ++G I + + A Y AK L +G+ F AR I +WL C
Sbjct: 956 YGVTFVGARDQIEGQLIDRGDIPLEE-CWNVAGYLAKKVLHCIGDTFHGARSIQNWLNLC 1014
Query: 695 AKVIA 699
A++I+
Sbjct: 1015 ARLIS 1019
>C5DX79_ZYGRC (tr|C5DX79) DNA-directed RNA polymerase OS=Zygosaccharomyces rouxii
(strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL
Y-229) GN=ZYRO0F02882g PE=3 SV=1
Length = 1311
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 237/685 (34%), Positives = 363/685 (52%), Gaps = 74/685 (10%)
Query: 78 ARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----QLVQAAVQIGMALE 133
A+ ++ + P + + K+ VI + +++ L N G + + +A + +G A+E
Sbjct: 449 AKQERARLDYGPYLSLVDPEKMCVITILELLKL---NSTGGIIEGMRTARAVISVGKAIE 505
Query: 134 QEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEV 193
E R + L K+E+ +L + + +K++ ++ K +K EE
Sbjct: 506 MEFRSEQLL---------KSESQAFRDLGKNSHELKKYL------QRAKSTFRSMKIEEN 550
Query: 194 S-PWSRAAQAKLGSRLIELLIETAYVH----SPVNQSADTPPDIRPAFRHGFKPQSRSPG 248
W +AA+AK+GS LI +LI + V PV + PAF HG++ + G
Sbjct: 551 KIMWPQAARAKIGSILISMLIHVSKVEVEGVDPVTKQKVYGE--APAFAHGYQYHN---G 605
Query: 249 QKILKNYGVIQCDPLVLAGL--EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMR 306
K+ GV++ ++ L E+ + WK + GG+ + S ++R
Sbjct: 606 SKL----GVLKIHRSLVHQLNGERLVASVQPQLLPMLVKPRPWKNWKSGGYYYTQSTLIR 661
Query: 307 THGSRKQQDVMKNVK-GEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGG---NVAG 362
+ S +Q +K V + V++ L++LG T +N L +V+ +W G ++ G
Sbjct: 662 SKDSPEQIAYLKAVSDATAINTVYDGLNVLGETPWTVNRPLFEVMSKVWNSGKPFLDIPG 721
Query: 363 LVDCENVPLPDKPPTE-DLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDED 421
+ E + L PP E D +EWK + ++ S RCD+ KL +AR E
Sbjct: 722 V--QEKLTLLPPPPREADPSVHREWKLKNKELANRFSSNRSTRCDSNYKLEIARAFLGEK 779
Query: 422 CFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGG 481
FY+PHNLDFRGRAYP+ PH NHLG+D+ RGLL F G+ LG GL+WLK+HL+NL+ G
Sbjct: 780 -FYFPHNLDFRGRAYPLSPHFNHLGNDMSRGLLLFWNGKRLGPQGLKWLKVHLSNLF--G 836
Query: 482 IEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPN 541
+K S R+ F + HI DI SA +P+ + WW++AE P+Q LA C+ L++A++ +P
Sbjct: 837 FDKASLLERVQFADEHIDDIKQSAQDPLKEDAWWMKAEKPWQALATCMELNDAMKLDNPE 896
Query: 542 SVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDS 601
ISH P+HQDG+CNGLQHYAALG D A VNLV ++P DVY+ +A V + +
Sbjct: 897 DFISHQPVHQDGTCNGLQHYAALGGDIDGATQVNLVPNDRPQDVYAHVAKLVIARLEIAA 956
Query: 602 NKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRL 661
K +A +L D+I RK+VKQTVMT+VYGVTY+GA QI K+L + D +
Sbjct: 957 AKGDE------VAMILKDKITRKVVKQTVMTNVYGVTYVGATFQIDKQLS--NIFEDRKY 1008
Query: 662 LFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI-----------AYEN-------Q 703
+ Y K A+ E+F+ A I WLG+CAK I +++N
Sbjct: 1009 SLELSKYLTKHVFGAVRELFQGAHLIQDWLGECAKRISKSIRLDVDEKSFKNGNKPDFMT 1068
Query: 704 AVHWTTPLGLPVVQPYCKTERHLVS 728
+V WTTPLGLP+VQPY +T + V+
Sbjct: 1069 SVIWTTPLGLPIVQPYRETSKKQVT 1093
>C4QX83_PICPG (tr|C4QX83) DNA-directed RNA polymerase OS=Komagataella pastoris
(strain GS115 / ATCC 20864) GN=PAS_chr1-4_0022 PE=3 SV=1
Length = 1321
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 236/662 (35%), Positives = 348/662 (52%), Gaps = 68/662 (10%)
Query: 98 KVAVIVMHKMMSLVMENEEGC-VQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEA- 155
K++ + + +++ ++ + ++ +A + +G A+E E R + L SK+ +
Sbjct: 463 KMSTLTILELLKIIFTGKNTTGIRTARAVISVGKAVELEYRSERLL-------SKEIDVF 515
Query: 156 DTEENLNNDKEKQRKFVNG-------LIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRL 208
N+ N KE +R G L+++ + + L +E + W +AK+GS L
Sbjct: 516 KNFRNMKNSKEFKRLVTTGSKNTFTKLLQQSRSASIDTEL-EETLFNWPNEIKAKIGSVL 574
Query: 209 IELLIETAYVHSPVNQSAD--TPPDIR---PAFRHGFKPQSRSPGQKILKNYGVIQCDPL 263
I LL+++A + Q D T ++ PA H ++ + G KI G+++
Sbjct: 575 ISLLLQSAKIDV---QGKDPITNEEVHGQVPAIFHQYQ---YANGNKI----GILKFHHD 624
Query: 264 VLAGLEK--CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNV- 320
+ L K + K W ++ GG+ + + ++RT S +Q +K
Sbjct: 625 FTSKLSKDNLSGAVQPQYLPMLVRPKPWLSHNLGGYYYTETSLIRTKDSPEQLAYVKAAS 684
Query: 321 KGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPL-PDKPPTE- 378
+ + KV++ L +LGNT IN + +V+ +W G + ++ P+ P +PP++
Sbjct: 685 ENNTIDKVYQGLTVLGNTPWTINSEIFNVISEVWNSGNQFLDIPAIQDSPIYPPQPPSDA 744
Query: 379 DLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPM 438
D I++WKY+VRK S RCD KL AR E Y+PHNLDFRGRAYP+
Sbjct: 745 DPSVIRDWKYQVRKVSNKFSSDRSMRCDANYKLETARGFIGERI-YFPHNLDFRGRAYPI 803
Query: 439 HPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHI 498
PHLNHLG+D+ RGLL F EG+ LG+ GLRWLKIHLANLY G++K + D R F + +
Sbjct: 804 SPHLNHLGNDMSRGLLLFWEGKELGERGLRWLKIHLANLY--GLDKETLDKREQFTDLNK 861
Query: 499 HDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGL 558
+I DSA P+ G WW +E P+Q L+ CI L+EA + +PN +SH+P+HQDG+CNGL
Sbjct: 862 ANIIDSATKPLAGKGWWKSSEKPWQTLSVCIELAEAWKLKNPNMFVSHIPVHQDGTCNGL 921
Query: 559 QHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLI 618
QHYAALG D A VNL+ KP DVYS +A V + D+ LA L
Sbjct: 922 QHYAALGGDVEGATQVNLMPDNKPNDVYSYVAKLVQKRVDIDATNGHQ------LALKLQ 975
Query: 619 DQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALG 678
I RK+VKQTVMTSVYGVTYIGA DQI +RL+E DD A Y A +++
Sbjct: 976 RHIKRKVVKQTVMTSVYGVTYIGASDQIDRRLKEI-FGDDDPDTHVAGRYLALQVFSSIR 1034
Query: 679 EVFEAARGIMSWLGDCAKVIAYENQ---------------------AVHWTTPLGLPVVQ 717
E+F A I WL + +K I + +V WT+PLGLP+VQ
Sbjct: 1035 ELFTGAHQIQDWLAEASKKITKSIRMDIDTSMTKKSSKSAKISHLASVIWTSPLGLPIVQ 1094
Query: 718 PY 719
PY
Sbjct: 1095 PY 1096
>F2QMY2_PICP7 (tr|F2QMY2) DNA-directed RNA polymerase OS=Komagataella pastoris
(strain ATCC 76273 / CBS 7435 / CECT 11047 / NRRL Y-11430
/ Wegner 21-1) GN=PP7435_Chr1-0797 PE=3 SV=1
Length = 1329
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 238/663 (35%), Positives = 350/663 (52%), Gaps = 70/663 (10%)
Query: 98 KVAVIVMHKMMSLVM--ENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEA 155
K++ + + +++ ++ +N G ++ +A + +G A+E E R + L SK+ +
Sbjct: 471 KMSTLTILELLKIIFTGKNTTG-IRTARAVISVGKAVELEYRSERLL-------SKEIDV 522
Query: 156 -DTEENLNNDKEKQRKFVNG-------LIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSR 207
N+ N KE +R G L+++ + + L +E + W +AK+GS
Sbjct: 523 FKNFRNMKNSKEFKRLVTTGSKNTFTKLLQQSRSASIDTEL-EETLFNWPNEIKAKIGSV 581
Query: 208 LIELLIETAYVHSPVNQSAD--TPPDIR---PAFRHGFKPQSRSPGQKILKNYGVIQCDP 262
LI LL+++A + Q D T ++ PA H ++ + G KI G+++
Sbjct: 582 LISLLLQSAKIDV---QGKDPITNEEVHGQVPAIFHQYQ---YANGNKI----GILKFHH 631
Query: 263 LVLAGLEK--CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNV 320
+ L K + K W ++ GG+ + + ++RT S +Q +K
Sbjct: 632 DFTSKLSKDNLSGAVQPQYLPMLVRPKPWLSHNLGGYYYTETSLIRTKDSPEQLAYVKAA 691
Query: 321 -KGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPL-PDKPPTE 378
+ + KV++ L +LGNT IN + +V+ +W G + ++ P+ P +PP++
Sbjct: 692 SENNTIDKVYQGLTVLGNTPWTINSEIFNVISEVWNSGNQFLDIPAIQDSPIYPPQPPSD 751
Query: 379 -DLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYP 437
D I++WKY+VRK S RCD KL AR E Y+PHNLDFRGRAYP
Sbjct: 752 ADPSVIRDWKYQVRKVSNKFSSDRSMRCDANYKLETARGFIGERI-YFPHNLDFRGRAYP 810
Query: 438 MHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENH 497
+ PHLNHLG+D+ RGLL F EG+ LG+ GLRWLKIHLANLY G++K + D R F + +
Sbjct: 811 ISPHLNHLGNDMSRGLLLFWEGKELGERGLRWLKIHLANLY--GLDKETLDKREQFTDLN 868
Query: 498 IHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNG 557
+I DSA P+ G WW +E P+Q L+ CI L+EA + +PN +SH+P+HQDG+CNG
Sbjct: 869 KANIIDSATKPLAGKGWWKSSEKPWQTLSVCIELAEAWKLKNPNMFVSHIPVHQDGTCNG 928
Query: 558 LQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVL 617
LQHYAALG D A VNL+ KP DVYS +A V + D+ LA L
Sbjct: 929 LQHYAALGGDVEGATQVNLMPDNKPNDVYSYVAKLVQKRVDIDATNGHQ------LALKL 982
Query: 618 IDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAAL 677
I RK+VKQTVMTSVYGVTYIGA DQI +RL+E DD A Y A +++
Sbjct: 983 QRHIKRKVVKQTVMTSVYGVTYIGASDQIDRRLKEI-FGDDDPDTHVAGRYLALQVFSSI 1041
Query: 678 GEVFEAARGIMSWLGDCAKVIAYENQ---------------------AVHWTTPLGLPVV 716
E+F A I WL + +K I + +V WT+PLGLP+V
Sbjct: 1042 RELFTGAHQIQDWLAEASKKITKSIRMDIDTSMTKKSSKSAKISHLASVIWTSPLGLPIV 1101
Query: 717 QPY 719
QPY
Sbjct: 1102 QPY 1104
>K9G2U3_PEND2 (tr|K9G2U3) DNA-directed RNA polymerase OS=Penicillium digitatum
(strain PHI26 / CECT 20796) GN=PDIG_71990 PE=3 SV=1
Length = 1288
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 241/683 (35%), Positives = 357/683 (52%), Gaps = 77/683 (11%)
Query: 95 PAAKVAVIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTE 154
P A+ ++ M + + + ++L A +G L+ E+ FL+ NKS+ S + +
Sbjct: 338 PDRLAALTLLSVMSTFSRQGMDKGIKLSILASVVGKELQDELIADTFLKRNKSMDSSRLK 397
Query: 155 ADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIE 214
A ++ L N K+KQ G ++ + L V + + E W +Q K+G+ L+ +L+E
Sbjct: 398 A-LKQTLANRKDKQ-----GRLRWRSL--VEKINAENESILWGSRSQVKIGAVLMSMLVE 449
Query: 215 TA----YVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQC---DPLVLAG 267
+ + P + ++PAF H ++ I N +++ +P
Sbjct: 450 VSKAPVWTEDPATKKRILT--MQPAFDHSYQINFGKRSGHIHMNSKLVEIVAREPPA--- 504
Query: 268 LEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTH-GSRKQQDVMKNV-KGEQM 325
E A+H + W G GG+ S ++RT G Q +K V K + +
Sbjct: 505 -ELLARHLPMVCKP-----RPWTGPRSGGYKVYESNLVRTTPGELLQPAYLKAVLKDDGL 558
Query: 326 QKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKP-PTEDLKQI 383
+++ LD+LG T +IN ++ DV+ W GG V L ++ +P++P P D
Sbjct: 559 KEIRAGLDVLGATGWKINQQVFDVMLEAWNDGGAVGKLAPLNPDLQVPEQPSPDADYATQ 618
Query: 384 QEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLN 443
++W ++VR+ + + HS RC +L VAR + E FY PHN+DFRGRAYP+ P++N
Sbjct: 619 KQWHHKVREIENLRSGFHSVRCFQNFQLEVARAFRKE-VFYLPHNMDFRGRAYPLPPYMN 677
Query: 444 HLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFD 503
+G+D RGLL F +G+ LG+SG+RWLKI +ANL+ G +K S R F NH+ D+ D
Sbjct: 678 QMGADNSRGLLLFDKGKALGESGMRWLKIQIANLF--GFDKASMSEREQFTMNHLDDVLD 735
Query: 504 SADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAA 563
SA+ ++G RWWL+AEDP+Q LAAC L AL+ S P +SHLPIHQDGSCNGLQHYAA
Sbjct: 736 SANAGLHGRRWWLQAEDPWQLLAACCELRNALQLSKPTEYVSHLPIHQDGSCNGLQHYAA 795
Query: 564 LGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRD-SNKDPSTFPNALLAKVLIDQID 622
LG D + A VNL ++P+DVY+ + V + + +D +N D LA+ L ++
Sbjct: 796 LGGDRVGAQQVNLEPSDRPSDVYTGVCEFVKEAIAQDAANGD-------RLAQRLDGRVT 848
Query: 623 RKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFE 682
RK+VKQTVMT+VYGVT++GA Q+K++L + + AA Y A ALG +F
Sbjct: 849 RKIVKQTVMTNVYGVTFLGATRQVKRQLIDYLPDLSNTERNKAAFYIATKIFGALGSMFN 908
Query: 683 AARGIMSWLGDCAKVIAYE----------------------------------NQAVHWT 708
A I WLGDCA+ I V WT
Sbjct: 909 GAHEIQYWLGDCAQRITQSVTPEQIEELTQAALVPKDERDDNFATSTDPEKSFRSTVIWT 968
Query: 709 TPLGLPVVQPY--CKTERHLVSL 729
TPLGLPVVQPY KT R SL
Sbjct: 969 TPLGLPVVQPYRTRKTRRVQTSL 991
>K9F8K1_PEND1 (tr|K9F8K1) DNA-directed RNA polymerase OS=Penicillium digitatum
(strain Pd1 / CECT 20795) GN=PDIP_81260 PE=3 SV=1
Length = 1288
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 241/683 (35%), Positives = 357/683 (52%), Gaps = 77/683 (11%)
Query: 95 PAAKVAVIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTE 154
P A+ ++ M + + + ++L A +G L+ E+ FL+ NKS+ S + +
Sbjct: 338 PDRLAALTLLSVMSTFSRQGMDKGIKLSILASVVGKELQDELIADTFLKRNKSMDSSRLK 397
Query: 155 ADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIE 214
A ++ L N K+KQ G ++ + L V + + E W +Q K+G+ L+ +L+E
Sbjct: 398 A-LKQTLANRKDKQ-----GRLRWRSL--VEKINAENESILWGSRSQVKIGAVLMSMLVE 449
Query: 215 TA----YVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQC---DPLVLAG 267
+ + P + ++PAF H ++ I N +++ +P
Sbjct: 450 VSKAPVWTEDPATKKRILT--MQPAFDHSYQINFGKRSGHIHMNSKLVEIVAREPPA--- 504
Query: 268 LEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTH-GSRKQQDVMKNV-KGEQM 325
E A+H + W G GG+ S ++RT G Q +K V K + +
Sbjct: 505 -ELLARHLPMVCKP-----RPWTGPRSGGYKVYESNLVRTTPGELLQPAYLKAVLKDDGL 558
Query: 326 QKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKP-PTEDLKQI 383
+++ LD+LG T +IN ++ DV+ W GG V L ++ +P++P P D
Sbjct: 559 KEIRAGLDVLGATGWKINQQVFDVMLEAWNDGGAVGKLAPLNPDLQVPEQPSPDADYATQ 618
Query: 384 QEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLN 443
++W ++VR+ + + HS RC +L VAR + E FY PHN+DFRGRAYP+ P++N
Sbjct: 619 KQWHHKVREIENLRSGFHSVRCFQNFQLEVARAFRKE-VFYLPHNMDFRGRAYPLPPYMN 677
Query: 444 HLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFD 503
+G+D RGLL F +G+ LG+SG+RWLKI +ANL+ G +K S R F NH+ D+ D
Sbjct: 678 QMGADNSRGLLLFDKGKALGESGMRWLKIQIANLF--GFDKASMSEREQFTMNHLDDVLD 735
Query: 504 SADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAA 563
SA+ ++G RWWL+AEDP+Q LAAC L AL+ S P +SHLPIHQDGSCNGLQHYAA
Sbjct: 736 SANAGLHGRRWWLQAEDPWQLLAACCELRNALQLSKPTEYVSHLPIHQDGSCNGLQHYAA 795
Query: 564 LGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRD-SNKDPSTFPNALLAKVLIDQID 622
LG D + A VNL ++P+DVY+ + V + + +D +N D LA+ L ++
Sbjct: 796 LGGDRVGAQQVNLEPSDRPSDVYTGVCEFVKEAIAQDAANGD-------RLAQRLDGRVT 848
Query: 623 RKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFE 682
RK+VKQTVMT+VYGVT++GA Q+K++L + + AA Y A ALG +F
Sbjct: 849 RKIVKQTVMTNVYGVTFLGATRQVKRQLIDYLPDLSNTERNKAAFYIATKIFGALGSMFN 908
Query: 683 AARGIMSWLGDCAKVIAYE----------------------------------NQAVHWT 708
A I WLGDCA+ I V WT
Sbjct: 909 GAHEIQYWLGDCAQRITQSVTPEQIEELTQAALVPKDERDDNFATSTDPEKSFRSTVIWT 968
Query: 709 TPLGLPVVQPY--CKTERHLVSL 729
TPLGLPVVQPY KT R SL
Sbjct: 969 TPLGLPVVQPYRTRKTRRVQTSL 991
>G8JMS2_ERECY (tr|G8JMS2) DNA-directed RNA polymerase OS=Eremothecium cymbalariae
(strain CBS 270.75 / DBVPG 7215 / KCTC 17166 / NRRL
Y-17582) GN=Ecym_1514 PE=3 SV=1
Length = 1298
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 237/685 (34%), Positives = 357/685 (52%), Gaps = 74/685 (10%)
Query: 69 VEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----QLVQA 124
++ ++ + K + AP + L K++VI + +++SL N G V + +A
Sbjct: 432 IDTKKPVQHSPKDKARMEYAPYLTLLNPEKMSVITILELLSL---NSTGGVSEGMRTARA 488
Query: 125 AVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEV 184
+ IG A+E E R L+ +E + D K+ L++ K
Sbjct: 489 VMAIGKAVEMEFRSEALLK-------------SENQMFKDVSKKSPEFKKLLQMAKTTFR 535
Query: 185 HVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVH----SPVNQSADTPPDIRPAFRHGF 240
+ ++Q +V W +AK+GS LI +LI A V PV + A PA H F
Sbjct: 536 NTKIEQSKVF-WPYQIRAKIGSLLISMLINVARVEVTGIDPVTKEAVYGE--APAICHTF 592
Query: 241 KPQSRSPGQKILKNYGVIQCDPLVL--AGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHL 298
+ ++ G KI GV++ + G E+ + W ++ GG+
Sbjct: 593 QYRT---GSKI----GVLKLHRSLTYQLGGERLNASVQPQHLPMLVKPRPWTSWNSGGYY 645
Query: 299 FLPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGG 357
+ S ++R+ S +Q +K V G+ + +++ L++LG+T +N L ++ IW G
Sbjct: 646 YSQSTLIRSKDSPEQLAYIKAVTGKGAVNNIYQGLNVLGDTAWTVNKPLFTILSKIWNSG 705
Query: 358 GNVAGLV----DCENVPLPDKPPTE-DLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLS 412
+ DC+ LP KPP E D +++ W+ R + RCD+ KL
Sbjct: 706 EEYLDIPPQEDDCQ---LPPKPPRESDPLELKRWRNDCRFKNIEYRGNRAMRCDSNYKLE 762
Query: 413 VARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKI 472
+AR E FY+PHN+DFRGRAYP+ PH NHLG+D+ R LL F +G+ LG+ GL WLK+
Sbjct: 763 IARAFLGEK-FYFPHNMDFRGRAYPLAPHFNHLGNDMTRALLIFWQGKKLGEDGLNWLKV 821
Query: 473 HLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLS 532
HLANLY G++K ++ R+ F E H+ DI DSA+NP++GN WW +A+ P+QCLA C+ L
Sbjct: 822 HLANLY--GMDKKPFEDRIKFTEEHLEDIKDSAENPLHGNGWWKKADKPWQCLATCMELR 879
Query: 533 EALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVR 592
+A + +P ISH P+HQDG+CNGLQHYAALG D A VNLV ++P DVY+ +A
Sbjct: 880 DAYKLENPEDFISHQPVHQDGTCNGLQHYAALGGDIEGARQVNLVPSDRPQDVYAFVAKL 939
Query: 593 VHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEE 652
V + + + + A+ L D I+RK+VK+TVMT+VYGVT++GA QI K L E
Sbjct: 940 VTERLTKAAAAGDEK------AEQLKDMINRKVVKRTVMTNVYGVTFVGASQQIDKELRE 993
Query: 653 KGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQ--------- 703
D + A Y + A++ E+F AA I WL + AK I+ +
Sbjct: 994 A--FPDKNESYDMARYLTRHVFASIRELFHAAHLIQDWLAESAKKISKSVRLDLEIEKGK 1051
Query: 704 ---------AVHWTTPLGLPVVQPY 719
+V WT+PLGLPVVQPY
Sbjct: 1052 KLDSSLMMTSVIWTSPLGLPVVQPY 1076
>Q5AVS1_EMENI (tr|Q5AVS1) DNA-directed RNA polymerase OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=AN7609.2 PE=3 SV=1
Length = 1391
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 246/686 (35%), Positives = 355/686 (51%), Gaps = 88/686 (12%)
Query: 95 PAAKVAVIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTE 154
P ++ ++ + +L + ++L AV IG + +EV + + +E +K E
Sbjct: 437 PEELASLTILTTINNLTRNGLDKGIKLAPLAVAIGNDVYEEVALQRMVE------RRKKE 490
Query: 155 ADTEENLNNDKE-----KQRKFVNGLIKRKKLKEVHVVLKQEEVS-PWSRAAQAKLGSRL 208
++ + K+ K R + G+ + LK ++QEE W+ A +AK+G+ L
Sbjct: 491 MNSAHRVKLIKQIFLGRKDRDKLKGINWKNALKS----MEQEEPDIVWATAIKAKVGAVL 546
Query: 209 IELLIETAYVHSPVNQSADTPPDIR-------PAFRHGFKPQSRSPGQKILKNYGVIQCD 261
+ LL + A V PVN++A R P F+H ++ + G++ G I +
Sbjct: 547 MSLLYDVAKVPVPVNEAAAAKKIKRRDEVVMQPVFQHSYQI---TWGRRT----GYIHVN 599
Query: 262 PLVLAGLEK-CAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMR-THGSRKQQDVMKN 319
P ++ L + A+ + WKGY G + + + +R T G Q +K
Sbjct: 600 PEMIKLLTREPAEDLLGRQLPMLCKPRPWKGYKDGAYFYHQNLFVRSTPGESLQPTYVKA 659
Query: 320 -VKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPD-KP-P 376
++ + ++ + + LDILG T IN + +V+ W G +A L + KP P
Sbjct: 660 ALENDGLKMIRKGLDILGGTGWVINRDVFNVMLEAWNTGEPIADLAPLDPDLPIPPKPSP 719
Query: 377 TEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAY 436
E + +EW +VR + HSQRC ++ VAR +E FY PHN+DFRGRAY
Sbjct: 720 EEGYEAEKEWHTKVRDIENQRGGYHSQRCFQNFQMEVARSYLNE-TFYLPHNMDFRGRAY 778
Query: 437 PMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVEN 496
P+ P+LN + +D RGLL F+E +PLG+SGLRWLKI +ANL G +K S R F +
Sbjct: 779 PIPPYLNQMAADNARGLLLFSEAKPLGESGLRWLKIQIANL--AGFDKASLSEREQFAMD 836
Query: 497 HIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCN 556
H+ D+ DSA+N ++G RWWL+AEDP+QCLAAC L AL+ +P S LPIHQDGSCN
Sbjct: 837 HLDDVLDSANNGLHGRRWWLQAEDPWQCLAACCELRNALQHPNPTEYASRLPIHQDGSCN 896
Query: 557 GLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNK-DPSTFPNALLAK 615
GLQHYAALG D+L A VNL ++P+DVYS +A V + + ++ + DP +AK
Sbjct: 897 GLQHYAALGGDKLGAQQVNLEPSDRPSDVYSAVAQYVKEAVATEAAQGDP-------IAK 949
Query: 616 VLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLA 675
+L +I RK+VKQTVMT+VYGVT+IGA QI+K+L D T A Y A+
Sbjct: 950 MLEGKITRKVVKQTVMTNVYGVTFIGAMKQIRKQLANHYPELSDHEKKTGAIYIARKVFQ 1009
Query: 676 ALGEVFEAARGIMSWLGDCAKVI------------------------------------- 698
ALG +FE AR I WLGD A I
Sbjct: 1010 ALGTMFEGARDIQHWLGDSANRITQSLPPEQIEDLAKEVLNPSFSTLPLTSRGKSKKSLS 1069
Query: 699 -----AYENQAVHWTTPLGLPVVQPY 719
A+ V WTTPLGLPVVQPY
Sbjct: 1070 SSDPSAHFKTTVIWTTPLGLPVVQPY 1095
>G8Y716_PICSO (tr|G8Y716) DNA-directed RNA polymerase OS=Pichia sorbitophila
(strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC
10061 / NRRL Y-12695) GN=Piso0_003940 PE=3 SV=1
Length = 1317
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 236/688 (34%), Positives = 362/688 (52%), Gaps = 72/688 (10%)
Query: 74 KAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGCV----QLVQAAVQIG 129
K + ++ K + AP + +P K+ VI + +++ L N G + + +A + +G
Sbjct: 452 KPEEKQALKDRLYYAPYLILVPPKKMCVITILELLKL---NSTGGIIDGMRTARAVISVG 508
Query: 130 MALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLK 189
ALE E + + ++ SKK + + ++F L +RK + +
Sbjct: 509 RALELEYKSQRLMQAEGRSLSKKLKTTNQ---------WKRF---LRQRKDYNKEDPIAN 556
Query: 190 QEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN----QSADTPPDIRPAFRHGFKPQSR 245
E W AK+GS L LLI A V PV + T ++PAF H ++
Sbjct: 557 NE----WDYPIYAKVGSVLASLLIHVAKV--PVKGTDPTTGKTVRGMQPAFHHTYQ---F 607
Query: 246 SPGQKILKNYGVIQCDPLV---LAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPS 302
GQK+ GV++ + LAG E + W+ Y+ GG+LF +
Sbjct: 608 FQGQKL----GVLKVHKSLVRQLAGNE-LGNSVQPQLLPMLVPPRPWRSYNDGGYLFSQN 662
Query: 303 YIMRTHGSRKQQDVMKNVKG-EQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGG--- 358
I+R S + ++ + +++ L++LGNT +N ++ DV+ +W G
Sbjct: 663 NIVRIKDSAETTAYLRAASDMNNLDPIYDGLNVLGNTAWTVNRKVFDVISKVWNTGEEYL 722
Query: 359 NVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMK 418
++ +++ ++P P P + + +++ RVRKA SQRCDT KL +AR
Sbjct: 723 DIPPIIEEPDLPSP-LPLNAEPSEKADYQRRVRKAVNDAASARSQRCDTNYKLEIARGFI 781
Query: 419 DEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLY 478
E F+ PHN+DFRGRAYP+ PH NHLG+D+ R L F +G+ LG+ GLRWLKIHLAN+Y
Sbjct: 782 GEKLFF-PHNVDFRGRAYPISPHFNHLGNDMTRSLFLFWDGKKLGEQGLRWLKIHLANVY 840
Query: 479 AGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSS 538
G++K D R+ FVE+++ +IFDSA NP++G +WW + + P+Q L+ C LSEA +
Sbjct: 841 --GVDKAPLDERVKFVEDNLDNIFDSAKNPLDGRKWWEKGDKPWQVLSVCFELSEAYKLD 898
Query: 539 SPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMR 598
P +SH+P+HQDG+CNGLQHYAALG D A VNL+ E+P DVY +A V +
Sbjct: 899 DPTEYVSHIPVHQDGTCNGLQHYAALGGDIEGARQVNLIPAERPQDVYKFVAGLVQKRVD 958
Query: 599 RDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITD 658
++ K A L D+I RK+VKQTVMT+VYGVT++GA QI+K+++ D
Sbjct: 959 AEAEKGNK------YAIFLRDKITRKVVKQTVMTNVYGVTFVGAVLQIQKQIDHHFGKDD 1012
Query: 659 DRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIA------YENQA-------- 704
+ + Y ++ E+F A I WLG+ A+ I+ YE +A
Sbjct: 1013 SDKVEEYSRYLTNHVFDSMRELFLGAHLIQDWLGESARRISKSVRIDYEEKASVNSNKPR 1072
Query: 705 ----VHWTTPLGLPVVQPYCKTERHLVS 728
V WTTPLGLP VQPY T++ ++S
Sbjct: 1073 HLSSVIWTTPLGLPCVQPYRVTKKQIIS 1100
>G8BS54_TETPH (tr|G8BS54) DNA-directed RNA polymerase OS=Tetrapisispora phaffii
(strain ATCC 24235 / CBS 4417 / NBRC 1672 / NRRL Y-8282 /
UCD 70-5) GN=TPHA0D00310 PE=3 SV=1
Length = 1322
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 241/704 (34%), Positives = 375/704 (53%), Gaps = 80/704 (11%)
Query: 51 LPRVKSLLLGWFEPLKEAVEA-EQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMS 109
LP VK + E KE + + E+K+ +R + + AP + K+ VI + +++
Sbjct: 438 LPYVKQEI----EKCKEVMNSTEKKSTVSRQNRLRMEYAPYFTLVDPEKMCVITILELLK 493
Query: 110 LVMENEEGCV----QLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDK 165
L N G + + +A + +G A+E E R + L K E+ + +
Sbjct: 494 L---NSTGGIIEGMRTARAVIAVGKAIEMEFRSEQLL---------KNESHIFKEI---- 537
Query: 166 EKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVH----SP 221
KQ + + ++ K + + ++Q ++ WS+ A+AK+GS +I LI A + P
Sbjct: 538 -KQSQNLKRFVRSAKSRFRSIKIEQSKI-IWSQPARAKIGSIMISNLINVAKIEVGGMDP 595
Query: 222 VNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGL--EKCAKHXXXXX 279
V + PAF H ++ + G K+ GV++ ++ L E+
Sbjct: 596 VTKEKVYGE--VPAFSHSYQYHN---GLKL----GVLKIHKSLVHQLNGERMVAAVQPQL 646
Query: 280 XXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVK-GEQMQKVFEALDILGNT 338
++WK + GG+ + S ++R+ S +Q +K V + +V+ L++LG+T
Sbjct: 647 LPMLVAPREWKNWKCGGYYYTQSTLIRSKDSPEQVAYLKAVSDAGAIDRVYHGLNVLGST 706
Query: 339 KRRINGRLLDVVESIWAGGG---NVAGLVDCENVPLPDKPPTEDLKQ--IQEWKYRVRKA 393
+N ++ +V+ +W G ++ G+ + N+ LP PP +D I++WK + +
Sbjct: 707 PWTVNRKIFNVISEVWNTGKPFLDIPGIQNTLNL-LP--PPAKDADPSIIRQWKLKNKDI 763
Query: 394 KKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGL 453
S RCD+ KL +AR E Y+PHNLDFRGRAYP+ PH NHLG+D+ RGL
Sbjct: 764 ANKFSSNRSVRCDSNYKLEIARAFLGEK-IYFPHNLDFRGRAYPLSPHFNHLGNDMSRGL 822
Query: 454 LEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNR 513
L F G+ LG SGL+WLK+HL+NLY G +K S + R+ F E ++ +I DSA+NP+NG
Sbjct: 823 LIFWRGKQLGASGLKWLKVHLSNLY--GFDKASLEDRVRFAEENMENIKDSAENPLNGKG 880
Query: 514 WWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAA 573
WW A+ P+Q L+ CI L+EA + +P ISH P+HQDG+CNGLQHYAALG D A
Sbjct: 881 WWKSADKPWQALSTCIELNEAFKLENPEDFISHQPVHQDGTCNGLQHYAALGGDCEGAKQ 940
Query: 574 VNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTS 633
VNL +KP DVY +A V + +++++ AKVL D+I RK+VKQTVMT+
Sbjct: 941 VNLKPSDKPMDVYKYVANLVVERLKKEAAGGDEK------AKVLQDKITRKVVKQTVMTN 994
Query: 634 VYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGD 693
VYGVTY+GA QI K+L + + + + Y + A+ E+F A I WLG+
Sbjct: 995 VYGVTYVGATFQIDKQLSD--VFENRNQSLELSKYLTRHVFMAIRELFHGAHLIQDWLGE 1052
Query: 694 CAKVI-----------AYENQ-------AVHWTTPLGLPVVQPY 719
C+ I +++NQ +V WTTPLGLP+VQPY
Sbjct: 1053 CSNKISRSIRLDVNEKSFKNQNKPDFMSSVIWTTPLGLPIVQPY 1096
>G2R133_THITE (tr|G2R133) DNA-directed RNA polymerase OS=Thielavia terrestris
(strain ATCC 38088 / NRRL 8126) GN=THITE_2114671 PE=3
SV=1
Length = 1408
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 256/766 (33%), Positives = 382/766 (49%), Gaps = 127/766 (16%)
Query: 52 PRVKSLLLGWFEPLKEAVEAEQ----KAHQARSKKQQ----ASIAPNVDSLPAAKVAVIV 103
P + S L W L+ + AEQ K+ A K Q+ P++ PA ++A +
Sbjct: 397 PSLNSRLYDWHRALEARIAAEQAKVDKSESAPKKSQEDLDRCLYGPHLLQAPAKRLAAVT 456
Query: 104 MHKMMS-LVMENEEGCVQLVQAAVQIGMALEQEVRI---------------HKFLEGNKS 147
+ +S L M + + + Q+ E+++R H+ + +
Sbjct: 457 ILSALSILAMHGADKGIPVSNMVQQVAKIAEEDIRSQILAKSLPYARLKLKHRRQQNARQ 516
Query: 148 LQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSP-------WSRAA 200
L ++ E EE +N+ E + ++ V+ V K+ SP W
Sbjct: 517 L-IRQRERKIEEPPSNEPETGARTLS----------VNAVSKEIGESPPDRLEARWPTVI 565
Query: 201 QAKLGSRLIELLIETAYVHSPVNQSADTPPDIR-------PAFRHGFKPQSRSPGQKILK 253
+AK G+ L+ LI++A + VN+ PD + PAF H + + G+K+
Sbjct: 566 RAKFGAVLLGALIDSAKIV--VNREH---PDTKQMVTQSMPAFIHTVQLKK---GRKV-- 615
Query: 254 NYGVIQCDPLVLAGL------EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRT 307
GVIQ + ++ + E A+H W +DKGG + PS ++R
Sbjct: 616 --GVIQPNRALVDLMKREPRGEALARHLPMVVEPV-----PWSRFDKGGFIGSPSPLIRL 668
Query: 308 HGSRKQQDVMKNVKGEQ--MQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVD 365
K+Q E+ M+++ LD+LG T RIN + DV+ W G A
Sbjct: 669 KNHEKEQRFYAEAAIERGDMEQMMRGLDVLGKTAWRINRPVFDVMLEAWNSGEEFANFPA 728
Query: 366 CE-NVPLPDKP-PTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCF 423
+ +P+P +P T+D + + W V+ A+ HS RC +L +AR +D+ F
Sbjct: 729 LDPKIPIPPEPDSTDDPMKRRLWVRAVKAAENEKSGLHSVRCFINFQLEIARAFRDQ-TF 787
Query: 424 YYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIE 483
Y+PHNLDFRGRAYP+ +LNH+G+D RGLL FA+G+PLGK+GLRWLK+HL+N+Y G +
Sbjct: 788 YFPHNLDFRGRAYPLPTYLNHMGADHMRGLLIFAKGKPLGKNGLRWLKVHLSNVY--GFD 845
Query: 484 KLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSV 543
K S R F ++ +IFDSADNP+ G RWWL AEDP+QCLAAC L AL S P +
Sbjct: 846 KASLQEREDFANQNLENIFDSADNPLTGKRWWLGAEDPWQCLAACFELKAALSSPDPAAF 905
Query: 544 ISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNK 603
+SH P+HQDG+CNGLQHYAALG D A VNL+ ++PADVY+ +A ++++ K
Sbjct: 906 VSHFPVHQDGTCNGLQHYAALGGDTWGAQQVNLLPGDRPADVYAAVA----ELVQEQVAK 961
Query: 604 DPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLF 663
D + N AK + +I+RK+VKQTVMT+VYGVT++GA+ Q++K+L+ +
Sbjct: 962 DVAAGNN--FAKAVDGKINRKVVKQTVMTNVYGVTFVGAKKQVQKQLDALYPDIEKETGI 1019
Query: 664 TAA---CYAAKVTLAALGEVFEAARGIMSWLGD-----CAKVIA---------------- 699
++A Y A AL +F A I +WLG+ C V
Sbjct: 1020 SSAILGSYIASKVFVALSTMFRGAHDIQNWLGEIGGRVCRAVTPEQLDRLAESSGEKVVR 1079
Query: 700 -----------------YENQAVHWTTPLGLPVVQPYCKTERHLVS 728
+ N V WTTPL +PVVQPY K+ L+S
Sbjct: 1080 RKTVKTERSTEDELASQFRNTLV-WTTPLRMPVVQPYRKSGTRLIS 1124
>K9IP16_DESRO (tr|K9IP16) DNA-directed RNA polymerase OS=Desmodus rotundus PE=2
SV=1
Length = 1222
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 208/550 (37%), Positives = 305/550 (55%), Gaps = 40/550 (7%)
Query: 195 PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKN 254
PW A +LG +L E+L++T + + Q T ++ P H + +S +
Sbjct: 558 PWPLAVVVQLGKQLAEVLVQTVKMPGHLAQRQGTH-NLIPVLYHVYSFRS-------FRQ 609
Query: 255 YGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXX---KKWKGYDKGGHLFLPSYIMRT-HGS 310
G+++ P LE A+ W G L P+ +MR+ G+
Sbjct: 610 IGILKPHPAFKQLLETAAERTMTFEAAEVPMLCPPLPWTSPHSGAFLLSPTKLMRSVEGT 669
Query: 311 RKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVP 370
+ Q ++++ + + L LGN R+NGR+LD+V +++ G C +
Sbjct: 670 MQHQRLLESCPPTNLHGALDTLTQLGNCAWRVNGRVLDLVLTLFNKKG-------CPRLG 722
Query: 371 LP------DKPPTEDL--KQIQEWKYRVRK----AKKMNLERHSQRCDTELKLSVARKMK 418
+P +PP L K E K +R+ K+ E HS R D +LS+A+ ++
Sbjct: 723 VPAPASEAPRPPENRLSTKASPERKVELRRQLARCLKVAREMHSLRTDALYRLSLAQHLR 782
Query: 419 DEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLY 478
+ F+ PHN+DFRGR YP PH NHLGSDL R LLEFA+GRPLG GL WLKIHL NL
Sbjct: 783 N-SVFWLPHNMDFRGRTYPCPPHFNHLGSDLARALLEFAQGRPLGPHGLDWLKIHLVNL- 840
Query: 479 AGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSS 538
G ++ S RL F + ++ I DSAD P+ G++WW+ A++P+Q LA C+ +++A+R+
Sbjct: 841 TGLKKRESLQARLAFADEMMNKILDSADKPMTGHKWWMEADEPWQALACCMEIAQAVRAP 900
Query: 539 SPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMR 598
P + +SH P+HQDGSCNGLQHYAALGRD + AA+VNLV + P DVYS +A +V R
Sbjct: 901 DPAAYVSHFPVHQDGSCNGLQHYAALGRDSVGAASVNLVPSDLPQDVYSSVAAQVEVFRR 960
Query: 599 RDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITD 658
+D+ + +A+VL I RK+VKQTVMT VYGVT G R QI+KRL E
Sbjct: 961 QDAEQ------GVQVAQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLREISNFPQ 1014
Query: 659 DRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQP 718
+ ++ A+ Y + +L E+F R I WL + A++IA+ AV W TPLG+P++QP
Sbjct: 1015 E-FVWQASHYLVRQVFNSLQEMFSGTRAIQHWLAESARLIAHTGLAVEWVTPLGIPIIQP 1073
Query: 719 YCKTERHLVS 728
Y + L+S
Sbjct: 1074 YHHDSKVLIS 1083
>H1UWP4_COLHI (tr|H1UWP4) DNA-directed RNA polymerase OS=Colletotrichum
higginsianum (strain IMI 349063) GN=CH063_04795 PE=3 SV=1
Length = 1400
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 238/687 (34%), Positives = 349/687 (50%), Gaps = 87/687 (12%)
Query: 93 SLPAAKVAVIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKK 152
S P AV ++ + S V+ + + L A V + E+++R + K+ Q K
Sbjct: 446 STPTRLAAVTILGALSSTVITGIDRGMPLSAAIVSLAKMTEEDIRDQAATQ-KKTAQKPK 504
Query: 153 TE----ADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRL 208
+ + T N+ NDK + N +L E V K PW A +AK+G+ L
Sbjct: 505 SRRMVMSPTPTNVANDKRSAEETSNHF---SQLSETAVADK-----PWPVAVRAKVGAAL 556
Query: 209 IELLIETAYVHSPVNQSADTPPDI---RPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVL 265
+ LIETA + V + +T + +PAF H + + IL N ++
Sbjct: 557 LSALIETAKIKV-VKEHPETKALVSQYQPAFSHVSRLKKGKKTGMILLNKELVNIMKREP 615
Query: 266 AGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKN--VKGE 323
G + AKH + W+ +DKGG L + ++R K Q + +
Sbjct: 616 QG-DYLAKHLPMVVEP-----EPWQAFDKGGFLESRANLVRIKQGDKDQKLYSEAAIARG 669
Query: 324 QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKP-PTEDLK 381
M +VF+ LD+LG T R+N +L+V+ + W G +A L N+P+P +P T D
Sbjct: 670 DMDQVFKGLDVLGKTPWRVNTPVLNVMLAAWNTGEALANLPALNPNIPIPREPEATNDPL 729
Query: 382 QIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPH 441
+ W VR A+ HS RC +L +AR +++ FY+PHN+DFRGRAYP+ +
Sbjct: 730 AHRAWVRAVRAAENERGGMHSVRCFMNFQLEIARAFRNQ-TFYFPHNIDFRGRAYPLPTY 788
Query: 442 LNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDI 501
LNH+G+D RGLL FA G+ LG+ GL+WLK+H+AN++ G +K S R F +++ +I
Sbjct: 789 LNHMGADHVRGLLRFANGKELGEEGLKWLKVHVANVF--GFDKASLKERESFAMDNLVNI 846
Query: 502 FDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHY 561
FDSA+NP++G RWWL+AEDP+QCLA C L AL S P +SHLP+HQDG+CNGLQHY
Sbjct: 847 FDSANNPLDGTRWWLKAEDPWQCLATCFELKAALESPEPTKFVSHLPVHQDGTCNGLQHY 906
Query: 562 AALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQI 621
AALG D A VNL +KPADVYS +A V + + +D+ ++A L D+I
Sbjct: 907 AALGGDSWGARQVNLEPGDKPADVYSAVANIVKEHIAKDAES------GNVIAVALRDKI 960
Query: 622 DRKLVKQTVMTSVYGVTYIGARDQIKKRLE--------EKGLITDDRLLFTAACYAAKVT 673
RK+VKQTVMT+VYGVT+ GA+ Q+ K+L+ E G D ++ + Y A +
Sbjct: 961 TRKVVKQTVMTNVYGVTFAGAKKQVCKQLDSLYPDLPKESGF---DNII--TSSYVATLV 1015
Query: 674 LAALGEVFEAARGIMSWLGDCAK------------------------------------- 696
AL +F A I WLG
Sbjct: 1016 FKALSSMFRGAHDIQYWLGXIGXRVCRALSAEQLERIKNDNILPSSSATAKAGDRKTTTD 1075
Query: 697 -VIAYENQAVHWTTPLGLPVVQPYCKT 722
++A + WTTPL +P+ QPY K+
Sbjct: 1076 DILAQFRATIVWTTPLRMPISQPYRKS 1102
>F0UNN0_AJEC8 (tr|F0UNN0) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain H88) GN=HCEG_06850 PE=3 SV=1
Length = 1397
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 246/703 (34%), Positives = 356/703 (50%), Gaps = 89/703 (12%)
Query: 73 QKAHQARSKKQQASIAPNVDSLPAAKVAVI-VMHKMMSLVMENEEGCVQLVQAAVQIGMA 131
+K+ + + Q+ I+P + ++ K+A + ++ +L + ++L + +G A
Sbjct: 429 KKSRMSPADSQRVEISPYLRAIKTDKLAALTILSTFNALNKSGVDKGLKLTGLVMYVGKA 488
Query: 132 LEQEVRIHKFLE-GNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQ 190
+ E + E KS +KK A ++ ++ K + +I R + + V
Sbjct: 489 VYDEYLAMQLRELEKKSKPTKKISALIDKLVHKGTRKAQVQWRRIIARFEQSQRPV---- 544
Query: 191 EEVSPWSRAAQAKLGSRLIELLIETAYVHSPV-----NQSADTPPDIRPAFRHGFKPQSR 245
WS QAK+G+ L +L+ TA V P NQ T + AFR ++ +
Sbjct: 545 ----DWSPVVQAKIGACLASMLLSTATVPVPTKDPKTNQQKQTD---QAAFRRVYQLER- 596
Query: 246 SPGQKILKNYGVIQCDPLVLAGL------EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLF 299
G ++ G + + ++ L E AKH + W GG L
Sbjct: 597 --GFRV----GYVHANDYIVEKLRREPLGELLAKHLPMVCPP-----RPWTSARGGGFLE 645
Query: 300 LPSYIMRT-HGSRKQQDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGG 357
PS +MR G Q ++ + VF L +LG T +IN +L+V+ W G
Sbjct: 646 YPSTVMRVKQGDISQLSYVETAAARGDLDTVFAGLTVLGKTGWKINRGVLNVMLEAWNSG 705
Query: 358 GNVAGLV-DCENVPLPDKPPTEDLKQIQEWKYRVR-KAKKMNLERHSQRCDTELKLSVAR 415
+A L + N+ P+KP T+D ++++ YR R A HSQRC +L +AR
Sbjct: 706 EEIANLAPENPNIIEPEKPDTDDRDILKDY-YRARMHATNARTGYHSQRCFQNFQLEIAR 764
Query: 416 KMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLA 475
++E FY PHNLDFRGRAYPM P+ N +G+D CRGLL F++GR LG SGLRWLKIHLA
Sbjct: 765 AYRNE-TFYLPHNLDFRGRAYPMPPYFNQMGADHCRGLLLFSKGRELGASGLRWLKIHLA 823
Query: 476 NLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEAL 535
N++ G +K S+ R F +H+ DI DSA N + G RWWL A DPFQCLAACI L+ A+
Sbjct: 824 NVF--GFDKASFQEREQFAMDHLEDIRDSAINGLKGKRWWLDAGDPFQCLAACIELTNAM 881
Query: 536 RSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHD 595
P +SHLP+HQDGSCNGLQHYAALG D + A VNL ++P+D+Y+ +A V
Sbjct: 882 ALEDPTKYVSHLPVHQDGSCNGLQHYAALGGDVIGAQQVNLEPSDRPSDIYTGVAEHVKQ 941
Query: 596 IMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRL-EEKG 654
+++D+ K T AK+L D+I RK+VKQTVMT+VYGVT++GA Q++K+L +
Sbjct: 942 SIQKDAAKGNET------AKLLEDKITRKIVKQTVMTNVYGVTFLGAIRQVRKQLVDHYP 995
Query: 655 LITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI---------------- 698
+ + A Y A+ ALG +F A I WLGDCA I
Sbjct: 996 DLLHSGVAGECATYIARKIFVALGSMFTGAHDIQFWLGDCANRISQSLSSEQIEALSDER 1055
Query: 699 ----------------------AYENQAVHWTTPLGLPVVQPY 719
++ V WTTPL LPV QPY
Sbjct: 1056 NLKVVGRFQGAKKLAKNIKDPKSHFKSTVVWTTPLKLPVAQPY 1098
>K1X9F9_MARBU (tr|K1X9F9) DNA-directed RNA polymerase OS=Marssonina brunnea f. sp.
multigermtubi (strain MB_m1) GN=MBM_00814 PE=3 SV=1
Length = 1461
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 241/704 (34%), Positives = 358/704 (50%), Gaps = 93/704 (13%)
Query: 88 APNVDSLPAAKVA-VIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNK 146
P + LP K+A V ++ M ++ + + L A + I ++E E
Sbjct: 443 GPFLRLLPPDKLAAVTILSAMTTMSSMGLDKGIPLSNAIMAIAKSVEDECAFDTI----- 497
Query: 147 SLQSKKTEADTEENLNNDKE-KQRKFVNGLIKRKKLKEVHVVLKQEEVSP------WSRA 199
K ++ + N NN + Q K K L + L Q E + W A
Sbjct: 498 ---QKASKKNIWPNSNNRPDIGQLKRATRFRTSKPL----IDLDQSETAEALEDRQWPLA 550
Query: 200 AQAKLGSRLIELLIETAYVHSPVN--QSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGV 257
+AK+G+ L+ LIE A V + ++ + ++PAF H + K+ K GV
Sbjct: 551 MRAKVGAFLMSALIEVAKVPVALTHPETGEIVTQMQPAFCHAHQ-------YKLGKKVGV 603
Query: 258 IQCDPLVLAGLEKCAKHXXXXX-XXXXXXXKKWKGYDKGGHLFLPSYIMRTH-GSRKQQD 315
I + ++A L++ H + W + KGG L PS IMR G + Q+
Sbjct: 604 IMANKSLVATLKREPVHSLLAKHLPMLVEPEPWSDFSKGGFLAHPSKIMRVKTGDKDQRY 663
Query: 316 VMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLV-DCENVPLPD 373
+ G+ M F+ L++LG T RIN ++ DV+ W G +A + + N+ P
Sbjct: 664 YAEAAIGQGDMTLTFKGLNVLGKTSWRINQQVFDVMLEAWNAGDAIANIPPETPNLKAPP 723
Query: 374 KP-PTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFR 432
+P ++D + ++W V+ + HSQRC +L +AR +K E+ FY+PHN+DFR
Sbjct: 724 EPEASQDPLERRQWIRAVKNVENHRSGLHSQRCFQNFQLEIARALKHEE-FYFPHNVDFR 782
Query: 433 GRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLG 492
GRAYP+ P+LNH+G+D CRGLL F +GR LG+SGLRWLKIH AN++ G +K S R
Sbjct: 783 GRAYPIPPYLNHMGADHCRGLLIFGKGRELGESGLRWLKIHAANVF--GFDKASLSEREA 840
Query: 493 FVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQD 552
F H+ +F++A NP+ G RWWL AEDP+Q LAAC+ L A+ S P +SHLP+HQD
Sbjct: 841 FAMKHMDQMFEAAKNPLGGTRWWLNAEDPWQFLAACMELKNAMESPDPTRFVSHLPVHQD 900
Query: 553 GSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRD-SNKDPSTFPNA 611
G+CNGLQHYAALG D A VNL ++PADVY+ +A V + + D +N +
Sbjct: 901 GTCNGLQHYAALGGDTWGAKQVNLEPADRPADVYTAVADLVKESIAEDLANGNQK----- 955
Query: 612 LLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEK--GLITDDRLLFTA-ACY 668
AK+L ++ RK+VKQTVMT+VYGVTYIGA+ Q++++L GL ++ + + A Y
Sbjct: 956 --AKILEGKVTRKVVKQTVMTNVYGVTYIGAKAQVRRQLVAAFPGLPNNEVINPNSLAAY 1013
Query: 669 AAKVTLAALGEVFEAARGIMSWLGDCAKVIAY---------------------------- 700
A +AL +F+ A I WLG+CA I+
Sbjct: 1014 VATKIFSALSTMFKGAHDIQFWLGECASRISTCLTAEQLTRLDSEWPRLVSEKAGKGPVT 1073
Query: 701 -----------------ENQAVHWTTPLGLPVVQPYCKTERHLV 727
+V WTTPL +PVVQPY ++ ++
Sbjct: 1074 KTTGARYTPATLESLTQFKSSVIWTTPLHMPVVQPYRSSKSRII 1117
>R1GF71_9PEZI (tr|R1GF71) Putative mitochondrial dna-directed rna polymerase
protein OS=Neofusicoccum parvum UCRNP2 GN=UCRNP2_6354
PE=4 SV=1
Length = 1046
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 249/727 (34%), Positives = 360/727 (49%), Gaps = 103/727 (14%)
Query: 64 PLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGCVQLVQ 123
P EA E+ A + AP++ KV+ I M L ME+ Q +Q
Sbjct: 56 PFLEAFTPEKLAATSLIVTVSTFGAPDMAG--GMKVSQIAMAIGKQLAMEHSLMVTQTIQ 113
Query: 124 AAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKLKE 183
A + ++ E R+ ++ +K++ + + + D +K K + LK
Sbjct: 114 ANHSLYRSI-SERRLRTLIKYSKTIDPSREKPPQDGGDGEDIDK---------KYEGLKH 163
Query: 184 VHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVN-QSADTPPDI---RPAFRHG 239
+ W+ +AK+G+ + ++E A + PV + +T + PAF H
Sbjct: 164 LE----------WAPMIKAKVGALCLSKILEAAKI--PVTREERETRKQLTANEPAFYHA 211
Query: 240 FKPQSRSPGQKILKNYGVIQCDPLVLAGLEK-CAKHXXXXXXXXXXXXKKWKGYDKGGHL 298
S G+K G+I+ +VL L + + W GY +GG+L
Sbjct: 212 ---TVYSAGRK----SGMIRLHQIVLDKLRREPLRGSFGTKYPMVVEPLPWTGYKEGGYL 264
Query: 299 FLPSYIMRTHGSRKQQDV--MKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAG 356
P +++ + Q + M ++ M +V L +LG T +IN + VV W
Sbjct: 265 RYPEPVIKEKSNDDSQKIYAMAAIEKGDMDQVLAGLSVLGKTAWKINRDVFKVVIEAWNT 324
Query: 357 GGNVAGLVDCENVPL---PDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSV 413
G + L EN + P+ P K+ W ++ HSQRC +L V
Sbjct: 325 GEPIGKLAP-ENPKMEYPPEPSPEAPKKEYALWLKEKKRIDNAKGGYHSQRCFQNFQLEV 383
Query: 414 ARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIH 473
AR +DE FY+PHN+DFRGRAYP+ P LNHLG+DL RGLL FA+G+PLG GL WLKIH
Sbjct: 384 ARAFRDE-AFYFPHNMDFRGRAYPIPPLLNHLGADLSRGLLTFAKGKPLGSVGLTWLKIH 442
Query: 474 LANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSE 533
LAN++ G +K S R F HI+DI+DS NP+ G +WWL+AEDP+QCLA C L
Sbjct: 443 LANVF--GYDKASLTDREAFAMEHINDIYDSCQNPLTGRKWWLKAEDPWQCLATCFELKN 500
Query: 534 ALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRV 593
A S P+S ISHLP+HQDG+CNGLQHYAALG D+ AA VNL ++P+D+YS +A
Sbjct: 501 AFDSPDPSSYISHLPVHQDGTCNGLQHYAALGGDKAGAAQVNLEPGDRPSDIYSAVA--- 557
Query: 594 HDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEK 653
DI++++ D AK+L +I RK+VKQTVMT+VYGVT+IGAR Q+ K+LE
Sbjct: 558 -DIVKKEVASDAKA--GGAFAKILDGRITRKVVKQTVMTNVYGVTFIGARAQVIKQLE-- 612
Query: 654 GLITDDRL---LFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI------------ 698
+++++ L Y AK+ ALG++F A+ I WLG CA I
Sbjct: 613 AVLSEEEQKAGLLGMGAYVAKLIFKALGQMFNGAQEIQDWLGVCANRITTSLTPEQIDMI 672
Query: 699 --------------------------AYENQAVH--------WTTPLGLPVVQPYCKT-E 723
A + +H WTTPL +PVVQPY K+
Sbjct: 673 EKQSTTGTASEMPRDPRYRKNRGKKKAVSGKDIHSQFRTTVIWTTPLRMPVVQPYRKSLS 732
Query: 724 RHLVSLL 730
R + ++L
Sbjct: 733 REITTVL 739
>M3YES8_MUSPF (tr|M3YES8) DNA-directed RNA polymerase OS=Mustela putorius furo
GN=Polrmt PE=3 SV=1
Length = 1231
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 201/543 (37%), Positives = 298/543 (54%), Gaps = 26/543 (4%)
Query: 195 PWSRAAQAKLGSRLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKN 254
PW + +LG +L E+L+E + V + P + P H + +S +
Sbjct: 561 PWPLSVLVQLGKKLAEMLVEAVRMPGSVA-APQGPGTLIPVLYHVYSFRS-------FRQ 612
Query: 255 YGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXX---KKWKGYDKGGHLFLPSYIMRT-HGS 310
G+++ P + L A+H W G L P+ +MR+ G+
Sbjct: 613 IGILKPHPAFIELLATAAEHTLTFEAAEVPMLCPPLPWTSPHTGAFLLSPTKLMRSLEGT 672
Query: 311 RKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGG--NVAGLVDCEN 368
+ Q ++ + + +AL LGN R+NGR+LD+V ++ G ++
Sbjct: 673 VQHQRLLDSCPPADLHGALDALTQLGNCAWRVNGRVLDLVLELFTAKGCPHLGVPAPASE 732
Query: 369 VPLPDK---PPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYY 425
P P PP Q E + + + K+ E HS R D +LS+A+ ++ F+
Sbjct: 733 APRPPDGRLPPGASPAQKAEVRRELARCLKVAREMHSLRSDALYRLSLAQHLRHR-VFWL 791
Query: 426 PHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKL 485
PHN+DFRGR YP PH +HLGSDL R LLEFA+GRPLG GL WLK+HL NL G ++
Sbjct: 792 PHNMDFRGRTYPCPPHFHHLGSDLARALLEFAQGRPLGARGLDWLKVHLVNL-TGLKKRE 850
Query: 486 SYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVIS 545
S RL F + + DI DSAD P+ G +WW++ ++P+Q LA C+ ++ A+R+ P + +S
Sbjct: 851 SLQARLAFADEVMKDILDSADRPMTGRKWWMQVDEPWQALACCMEIARAVRAPDPAAYVS 910
Query: 546 HLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDP 605
H P+HQDGSCNGLQHYAALGRD + AA+VNL+ + P DVYS +A +V R+D+ +
Sbjct: 911 HFPVHQDGSCNGLQHYAALGRDSVGAASVNLLPSDVPQDVYSGVAAQVEVFRRQDAKR-- 968
Query: 606 STFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTA 665
+A+VL I RK+VKQTVMT VYGVT G R QI++RL E + ++ A
Sbjct: 969 ----GVGVAQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIERRLRELSDFPQE-FVWEA 1023
Query: 666 ACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERH 725
+ Y + +L E+F R I WL + A++IA+ AV W TPLG+PV+QPY + +
Sbjct: 1024 SHYLVRQVFNSLQEMFSGTRAIQHWLTESARLIAHTGSAVQWVTPLGVPVIQPYHQDAKV 1083
Query: 726 LVS 728
L++
Sbjct: 1084 LIA 1086
>M5BWD9_9HOMO (tr|M5BWD9) DNA-directed RNA polymerase, mitochondrial
OS=Rhizoctonia solani AG-1 IB GN=RPO41 PE=4 SV=1
Length = 564
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 201/476 (42%), Positives = 297/476 (62%), Gaps = 22/476 (4%)
Query: 183 EVHVVLKQEEVSP-WSRAAQAKLGSRLIELLIETAYV-HSPVNQSADTPPDIRPAFRHGF 240
E +V E P W++ + ++GS L++ ++ +AY+ + V+++ + + +PAF H +
Sbjct: 101 ESPIVTNMESSMPEWTQVGRVRVGSFLVDGVMNSAYIKRNGVDENGEHYSEDQPAFMHSY 160
Query: 241 KPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXXKK--WKGYDKGGHL 298
+ G+K+ GVI+ +P+V + + + K W+ +DKGG+L
Sbjct: 161 E---YIRGKKL----GVIKLNPVVGEKMARDSIRDTLHPRHLPMLVKPQPWEDFDKGGYL 213
Query: 299 FLPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGG 357
L S +MR S +Q +K+ + V+E LD LG T RIN ++L+VV +W G
Sbjct: 214 KLRSTVMRIKDSPEQLSYLKHASAAGHVDFVYECLDALGETPWRINDKILNVVLQVWNEG 273
Query: 358 GNVAGLVDCE-NVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARK 416
+AG+ + ++ P +P ED + + ++++ H +RC+ KL VAR
Sbjct: 274 KGLAGIPPVQLDIEEPPQPTDEDPRARATYLFKMKSILADKRNNHGERCNVNYKLEVARA 333
Query: 417 MKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLAN 476
+ D FY PHNLDFRGRAYP+ PHLNH+G DLCRGLL F+E R LG+ GLRWLKIHLAN
Sbjct: 334 FVN-DEFYMPHNLDFRGRAYPIPPHLNHIGDDLCRGLLLFSERRSLGERGLRWLKIHLAN 392
Query: 477 LYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALR 536
++ G +K S+D R+ FVE H+ DI DSA+ P+NG RWWL+A+DP+QCL+ C+ L+EAL+
Sbjct: 393 VF--GYDKASFDERVSFVEKHLEDIRDSAEKPLNGGRWWLKADDPWQCLSTCMELTEALK 450
Query: 537 SSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDI 596
P S+LP+HQDG+CNGLQHYAALG D+ A VNL ++PADVYS +A V +
Sbjct: 451 FQVPALYPSNLPVHQDGTCNGLQHYAALGGDKTGAQHVNLERGDRPADVYSHVARMVDVV 510
Query: 597 MRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEE 652
+ +D+ + AKV+ +I RK+VKQTVMT+VYGVT+IGARDQI+K+L +
Sbjct: 511 VDQDAAE------GVPEAKVVQGKIARKVVKQTVMTTVYGVTFIGARDQIEKQLRD 560
>F1PCF7_CANFA (tr|F1PCF7) DNA-directed RNA polymerase OS=Canis familiaris GN=POLRMT
PE=3 SV=2
Length = 1221
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 207/545 (37%), Positives = 297/545 (54%), Gaps = 32/545 (5%)
Query: 195 PWSRAAQAKLGSRLIELLIETAYVHSPVN--QSADTPPDIRPAFRHGFKPQSRSPGQKIL 252
PW +LG RL ELL+ET + + Q A T + P H + +S
Sbjct: 553 PWPLPVLVELGKRLAELLVETVRIPGSLAAPQGACT---LIPVLYHVYSFRS-------F 602
Query: 253 KNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXX---KKWKGYDKGGHLFLPSYIMRT-H 308
+ G+++ P L A+H W G L P+ +MR+
Sbjct: 603 RQIGILKPHPAFTELLAAAAEHTLIFEAAEVPMLCPPLPWTSPHTGAFLLSPTKLMRSLE 662
Query: 309 GSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGG--NVAGLVDC 366
G+ + Q ++ + ++ +AL LGN R+NGR+LD+V ++A G +
Sbjct: 663 GTMQHQRLLDSCPPAELHGALDALTQLGNCAWRVNGRVLDLVLELFAAKGCPRLGVPAPP 722
Query: 367 ENVPLPDK---PPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCF 423
P P + PP Q E + + + K+ E HS R D +LS+A+ ++ F
Sbjct: 723 SEAPRPPEGRLPPDASPAQKAEVRRELARCLKVAREMHSLRSDALYRLSLAQHLRHR-VF 781
Query: 424 YYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIE 483
+ PHN+DFRGR YP PH NHLGSDL R LLEFA+GRPLG GL WLKIHL NL G++
Sbjct: 782 WLPHNMDFRGRTYPCPPHFNHLGSDLARALLEFAQGRPLGPHGLDWLKIHLVNLT--GLK 839
Query: 484 KLS-YDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNS 542
K RL F + + DI DSAD P+ G +WW+ ++P+Q LA C+ ++ A+RS P +
Sbjct: 840 KHEPLQARLVFADEVMDDILDSADRPMTGRKWWMEVDEPWQALACCMEIARAVRSPDPTA 899
Query: 543 VISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSN 602
+SH P+HQDGSCNGLQHYAALGRD + AA+VNL+ + P DVYS +A +V R+D+
Sbjct: 900 FVSHFPVHQDGSCNGLQHYAALGRDSIGAASVNLLPSDFPQDVYSGVAAQVEVFRRQDAQ 959
Query: 603 KDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLL 662
+ +A+VL I RK+VKQTVMT VYGVT G R QI++RL E + +
Sbjct: 960 R------GVRVAQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIERRLRELSNFPQE-FV 1012
Query: 663 FTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKT 722
+ A+ Y + +L E+F R I WL + A++IA AV W TPLG+P++QPY +
Sbjct: 1013 WEASHYLVRQVFNSLQEMFSGTRAIQHWLTESARLIAQTGSAVEWVTPLGIPIIQPYHRD 1072
Query: 723 ERHLV 727
+ ++
Sbjct: 1073 SKVMI 1077
>K0KTX3_WICCF (tr|K0KTX3) DNA-directed RNA polymerase OS=Wickerhamomyces ciferrii
(strain F-60-10 / ATCC 14091 / CBS 111 / JCM 3599 / NBRC
0793 / NRRL Y-1031) GN=BN7_4408 PE=3 SV=1
Length = 1332
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 262/761 (34%), Positives = 385/761 (50%), Gaps = 110/761 (14%)
Query: 15 ALRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSL---LLGWFEPLKEAVEA 71
AL + IEA E W +L KSL L GWFE + V
Sbjct: 366 ALENKSIEAAQEKWKHEYEEIKKRG----------DLGMSKSLNARLWGWFEQMMPLVRD 415
Query: 72 EQK------AHQARSKKQQA--------SIAPNVDSLPAAKVAVIVMHKMMSLVMENEEG 117
E + Q ++ K +A AP + L KV VI + +M+ N G
Sbjct: 416 EIERCKNVDDIQIKTLKNEAFAQHSERKKYAPYLRLLDPKKVTVITILEMLK---NNSTG 472
Query: 118 CV----QLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVN 173
+ + +A + + ALE E R + L TE + +N +N K
Sbjct: 473 GISEGMRTARAVLSVSKALELEFRSEQIL---------NTEKNFVKNFDNSK-------- 515
Query: 174 GLIKRKKLKEVHVVL---KQEEVSP----WSRAAQAKLGSRLIELLIETAYVH-SPVNQS 225
L K LK+ + L K + +S W + + K+GS LI +L+ A V S V+ S
Sbjct: 516 -LSNPKNLKKYSMSLSNFKNDVISDMKVYWPQDIKVKIGSVLISILMHVAKVEVSGVDPS 574
Query: 226 ADTPPDIR---PAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGL--EKCAKHXXXXXX 280
T +R PAF H F+ + G KI G+++ ++ + L +K
Sbjct: 575 --TKQLVRGEAPAFYHSFQYHN---GAKI----GILKIHKVLSSQLSADKLVGAVQPQSL 625
Query: 281 XXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKR 340
+ W ++ G + + + I+R S +Q +K +++ KV++ L++LGNT
Sbjct: 626 PMLIQPRPWTSWNNGAYYYSQNQIIRLRDSPEQLAYIK-ASSDKLDKVYDGLNVLGNTAW 684
Query: 341 RINGRLLDVVESIWAGGGNVAGLVDC-ENVPLPDKPP-TEDLKQIQEWKYRVRKAKKMNL 398
+N R+ V+ IW G + E++ LP+ PP + D + EWK +V+ +
Sbjct: 685 TVNERVFKVMSKIWNTGDEFLDIPKAHESLELPEVPPRSSDPSVLNEWKIKVKALQDKYA 744
Query: 399 ERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAE 458
S RCD KL +AR E FY+PHNLDFRGRAYP+ P+ NH+GSDL RGLL F +
Sbjct: 745 TDRSTRCDANYKLEIARAFLGEK-FYFPHNLDFRGRAYPISPNFNHMGSDLSRGLLLFWK 803
Query: 459 GRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRA 518
G+ +G+ GLRWLKIHLANL+ GI+K + R FV ++I + +A++P+ WW +A
Sbjct: 804 GKEIGEEGLRWLKIHLANLF--GIDKAPLNEREAFVNDNIELVKRAAEDPMANQEWWTKA 861
Query: 519 EDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVA 578
+ P+Q LA I+L++AL+ P ISH P+HQDG+CNGLQHYAALG D A VNL
Sbjct: 862 DKPWQALATIIDLADALKLPDPTKHISHQPVHQDGTCNGLQHYAALGGDVEGATQVNLAP 921
Query: 579 KEKPADVYSEIAVRVHDIMRR-DSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGV 637
+KP DVY+ +A V + +N D + A++L D I RK+VKQTVMT+VYGV
Sbjct: 922 SDKPQDVYTHVAKLVRAKLEEAAANGDEN-------ARMLKDNIKRKVVKQTVMTNVYGV 974
Query: 638 TYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKV 697
T +GA +QI K+L+ + ++D+ + + Y KV A++ E+FE A I WL CAK+
Sbjct: 975 TQVGATNQIHKQLQ--NVFSEDQ-SYKLSVYLTKVVFASMRELFEGAHLIQDWLAICAKM 1031
Query: 698 I---------AYENQ----------AVHWTTPLGLPVVQPY 719
I +YE +V WTTPL LP+VQPY
Sbjct: 1032 ISKSVRIDIDSYEEMGPKKKPSFMASVIWTTPLDLPIVQPY 1072
>N4VYU9_COLOR (tr|N4VYU9) DNA-directed RNA polymerase OS=Colletotrichum orbiculare
(strain 104-T / ATCC 96160 / CBS 514.97 / LARS 414 / MAFF
240422) GN=Cob_00315 PE=4 SV=1
Length = 1358
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 236/701 (33%), Positives = 352/701 (50%), Gaps = 95/701 (13%)
Query: 93 SLPAAKVAVIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKK 152
S P+ A+ ++H + ++ + + L A + E + R F+ N+ K
Sbjct: 397 STPSRLAALTIIHTLSAVTSVGADRGISLATAVTGLAKTAEDDAR--AFIMANEKRTDKN 454
Query: 153 TEADTEENLNN--------DKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKL 204
T+ L++ + + RK V L+K K KE + VS W A + K+
Sbjct: 455 TKPSRRVKLSSAEGPQFTLESTESRKVVKPLVKEDKAKESTMA----NVS-WPPAVRGKV 509
Query: 205 GSRLIELLIETAYV----HSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQC 260
G+ L+ IE+A + PV ++ + +PAF H + + IL N ++
Sbjct: 510 GAALLAAFIESAKISKIREDPVTKTLFS--QSQPAFAHTTQLKRGKQVGMILLNKELVSV 567
Query: 261 DPLVLAGLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKN- 319
G + AKH WK +DKGG L + ++R K Q +
Sbjct: 568 LSREPPG-DFLAKHLPMLVPPA-----PWKSFDKGGFLESKTSLVRVKQGDKDQRLYTEA 621
Query: 320 -VKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKP-P 376
+ M +V + LD+LG T R+N +L+V+ W G +A + +PLPD+P P
Sbjct: 622 AIARGDMDQVLKGLDVLGKTAWRVNTPVLNVMLEAWNSGERLANMPPLNPQIPLPDEPEP 681
Query: 377 TEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAY 436
++D + + W V+ + HSQRC +L +AR +++ FY+PHN+DFRGRAY
Sbjct: 682 SDDPSERRAWIKAVKAVENEKGSLHSQRCYMNFQLEIARAFRNQ-TFYFPHNIDFRGRAY 740
Query: 437 PMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVEN 496
P+ +LNH+G+D RGLL FA G+ LG+ GL+WLK+HLAN++ G +K S + R F +
Sbjct: 741 PIPTYLNHMGADNVRGLLRFANGKQLGERGLKWLKVHLANVF--GFDKASLEDRASFASD 798
Query: 497 HIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCN 556
++ +IFDSA+NP+ GNRWWL+AEDP+QCLA C L A P +SHLP+HQDG+CN
Sbjct: 799 NLVNIFDSANNPLGGNRWWLQAEDPWQCLATCFELKAAFELPDPTKYVSHLPVHQDGTCN 858
Query: 557 GLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKV 616
GLQHYAALG D A VNL KPADVYS +A DI++ KD + NA +A
Sbjct: 859 GLQHYAALGGDAWGARQVNLEPGAKPADVYSAVA----DIVKEGIAKD-AKAGNA-MAIA 912
Query: 617 LIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLE--------EKGLITDDRLLFTAACY 668
L +I RK+VKQTVMT+VYGVT+ GAR Q+ ++L+ E G D ++ A Y
Sbjct: 913 LTGKITRKVVKQTVMTNVYGVTFSGARKQVCRQLDALYPELPKESG---QDNIVL--ASY 967
Query: 669 AAKVTLAALGEVFEAARGIMSWLGDCA--------------------------------- 695
A++ ALG +F A I WLG+
Sbjct: 968 IARLIFQALGSMFRGAHDIQFWLGEIGGRVCRALSPEQMSRIANEGVNNPQGRKKAAASS 1027
Query: 696 ---------KVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
++A + WTTP+ +PV QPY ++ ++
Sbjct: 1028 ANTYKTSTQALLAEMRSTIVWTTPMRMPVAQPYRRSGTRII 1068
>J9P8Y8_CANFA (tr|J9P8Y8) DNA-directed RNA polymerase OS=Canis familiaris GN=POLRMT
PE=3 SV=1
Length = 1414
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 207/545 (37%), Positives = 297/545 (54%), Gaps = 32/545 (5%)
Query: 195 PWSRAAQAKLGSRLIELLIETAYVHSPVN--QSADTPPDIRPAFRHGFKPQSRSPGQKIL 252
PW +LG RL ELL+ET + + Q A T + P H + +S
Sbjct: 553 PWPLPVLVELGKRLAELLVETVRIPGSLAAPQGACT---LIPVLYHVYSFRS-------F 602
Query: 253 KNYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXX---KKWKGYDKGGHLFLPSYIMRT-H 308
+ G+++ P L A+H W G L P+ +MR+
Sbjct: 603 RQIGILKPHPAFTELLAAAAEHTLIFEAAEVPMLCPPLPWTSPHTGAFLLSPTKLMRSLE 662
Query: 309 GSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGG--NVAGLVDC 366
G+ + Q ++ + ++ +AL LGN R+NGR+LD+V ++A G +
Sbjct: 663 GTMQHQRLLDSCPPAELHGALDALTQLGNCAWRVNGRVLDLVLELFAAKGCPRLGVPAPP 722
Query: 367 ENVPLPDK---PPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCF 423
P P + PP Q E + + + K+ E HS R D +LS+A+ ++ F
Sbjct: 723 SEAPRPPEGRLPPDASPAQKAEVRRELARCLKVAREMHSLRSDALYRLSLAQHLRHR-VF 781
Query: 424 YYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIE 483
+ PHN+DFRGR YP PH NHLGSDL R LLEFA+GRPLG GL WLKIHL NL G++
Sbjct: 782 WLPHNMDFRGRTYPCPPHFNHLGSDLARALLEFAQGRPLGPHGLDWLKIHLVNLT--GLK 839
Query: 484 KLS-YDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNS 542
K RL F + + DI DSAD P+ G +WW+ ++P+Q LA C+ ++ A+RS P +
Sbjct: 840 KHEPLQARLVFADEVMDDILDSADRPMTGRKWWMEVDEPWQALACCMEIARAVRSPDPTA 899
Query: 543 VISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSN 602
+SH P+HQDGSCNGLQHYAALGRD + AA+VNL+ + P DVYS +A +V R+D+
Sbjct: 900 FVSHFPVHQDGSCNGLQHYAALGRDSIGAASVNLLPSDFPQDVYSGVAAQVEVFRRQDAQ 959
Query: 603 KDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLL 662
+ +A+VL I RK+VKQTVMT VYGVT G R QI++RL E + +
Sbjct: 960 R------GVRVAQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIERRLRELSNFPQE-FV 1012
Query: 663 FTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKT 722
+ A+ Y + +L E+F R I WL + A++IA AV W TPLG+P++QPY +
Sbjct: 1013 WEASHYLVRQVFNSLQEMFSGTRAIQHWLTESARLIAQTGSAVEWVTPLGIPIIQPYHRD 1072
Query: 723 ERHLV 727
+ ++
Sbjct: 1073 SKVMI 1077
>C6HMP3_AJECH (tr|C6HMP3) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain H143) GN=HCDG_07359 PE=3 SV=1
Length = 1265
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 225/578 (38%), Positives = 305/578 (52%), Gaps = 79/578 (13%)
Query: 196 WSRAAQAKLGSRLIELLIETAYVHSPV-----NQSADTPPDIRPAFRHGFKPQSRSPGQK 250
WS QAK+G+ L +L+ TA V P NQ T + AFR ++ + G +
Sbjct: 433 WSPVVQAKIGACLASMLLSTATVPVPTKDPKTNQQKQTD---QAAFRRVYQLER---GFR 486
Query: 251 ILKNYGVIQCDPLVLAGL------EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYI 304
+ G + + ++ L E AKH + W GG L PS +
Sbjct: 487 V----GYVHANDYIVEKLRREPLGELLAKHLPMVCPP-----RPWTSARGGGFLEYPSTV 537
Query: 305 MRT-HGSRKQQDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAG 362
MR G Q ++ + VF L +LG T +IN +L+V+ W G +A
Sbjct: 538 MRVKQGDISQLSYVETAAARGDLDTVFAGLTVLGKTGWKINRGVLNVMLEAWNSGEEIAN 597
Query: 363 LV-DCENVPLPDKPPTEDLKQIQEWKYRVR-KAKKMNLERHSQRCDTELKLSVARKMKDE 420
L + N+ P+KP T+D ++++ YR R A HSQRC +L +AR ++E
Sbjct: 598 LAPENPNIIEPEKPDTDDRDILKDY-YRARMHATNARTGYHSQRCFQNFQLEIARAYRNE 656
Query: 421 DCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAG 480
FY PHNLDFRGRAYPM P+ N +G+D CRGLL F++GR LG SGLRWLKIHLAN++
Sbjct: 657 -TFYLPHNLDFRGRAYPMPPYFNQMGADHCRGLLLFSKGRELGASGLRWLKIHLANVF-- 713
Query: 481 GIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSP 540
G +K S+ R F +H+ DI DSA N + G RWWL A DPFQCLAACI L+ A+ P
Sbjct: 714 GFDKASFQEREQFAMDHLEDIRDSAINGLKGKRWWLDAGDPFQCLAACIELTNAMALEDP 773
Query: 541 NSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRD 600
+SHLP+HQDGSCNGLQHYAALG D + A VNL ++P+D+Y+ +A V +++D
Sbjct: 774 TKYVSHLPVHQDGSCNGLQHYAALGGDVIGAQQVNLEPSDRPSDIYTGVAEHVKQSIQKD 833
Query: 601 SNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRL-EEKGLITDD 659
+ K T AK+L D+I RK+VKQTVMT+VYGVT++GA Q++K+L + +
Sbjct: 834 AAKGNET------AKLLEDKITRKIVKQTVMTNVYGVTFLGAIRQVRKQLVDHYPDLLHS 887
Query: 660 RLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI--------------------- 698
+ A Y A+ ALG +F A I WLGDCA I
Sbjct: 888 GVAGECATYIARKIFVALGSMFTGAHDIQFWLGDCANRISQSLSSEQIEALSDERNLKVV 947
Query: 699 -----------------AYENQAVHWTTPLGLPVVQPY 719
++ V WTTPL LPV QPY
Sbjct: 948 GRFQGAKKLAKNIKDPKSHFKSTVVWTTPLKLPVAQPY 985
>Q0CV53_ASPTN (tr|Q0CV53) DNA-directed RNA polymerase OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=ATEG_02431 PE=3 SV=1
Length = 1382
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 246/703 (34%), Positives = 359/703 (51%), Gaps = 74/703 (10%)
Query: 63 EPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENE-EGCVQL 121
E LK EAE + +K++ + SL ++A + + ++S E +++
Sbjct: 406 EELKLIEEAESNPVRTFEQKERCEYGVFLRSLDPERLAALTILAVISTFSRGGMEKSIKV 465
Query: 122 VQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVNGLIKRKKL 181
IG L+ E+ K L+ +++ +A +E L K+K R +
Sbjct: 466 SAIVTTIGKELQDELIAEKTLQKQSGADARRVKA-VKEMLAGRKQKD--------GRARW 516
Query: 182 KEVHVVLKQEEVSP-WSRAAQAKLGSRLIELLIETAYVHSPV----NQSADTPPDIRPAF 236
+ + L+QE+ + W +AK+G+ L+ LL E +PV +QS ++PAF
Sbjct: 517 QNIVRSLEQEDPTVVWPPRVKAKIGAVLMSLLFEVG--KAPVAMQHSQSKKQEVTMQPAF 574
Query: 237 RHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEK-CAKHXXXXXXXXXXXXKKWKGYDKG 295
+H ++ S G+K G I P ++ + K K W G G
Sbjct: 575 QHSYQI---SWGRK----GGYIHLHPEIVKIITKEPTADLLGRHLPMICKPKPWGGMKDG 627
Query: 296 GHLFLPSYIMR-THGSRKQQDVMKN-VKGEQMQKVFEALDILGNTKRRINGRLLDVVESI 353
G+ + I+R T G Q MK ++ + ++++ E LDILG+T IN + DV+
Sbjct: 628 GYFLYQNNIVRSTPGETLQPSYMKAALQNDGLKQIREGLDILGSTGWTINRDVFDVMLEA 687
Query: 354 WAGGGNVAGLVDCE-NVPLPDKP-PTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKL 411
W G +A L E ++P P +P P E + ++W +R + HS RC ++
Sbjct: 688 WNLGEPIANLSPLEPDLPHPPRPAPEEGYEAEKKWDNAMRDIENRRAGMHSNRCFQNFQM 747
Query: 412 SVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLK 471
VAR ++E FY PHN+DFRGRAYP+ P+LN +G+D RGLL F+E +PLG +GL+WLK
Sbjct: 748 EVARAYRNE-TFYLPHNMDFRGRAYPLPPYLNQMGADNARGLLLFSEAKPLGTTGLKWLK 806
Query: 472 IHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINL 531
I +ANL G +K S R F ++H+ DI DSA+ ++G RWWL AEDP+QCLAAC L
Sbjct: 807 IQIANL--AGFDKASLSEREKFADDHLDDILDSANKGLHGRRWWLNAEDPWQCLAACCEL 864
Query: 532 SEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAV 591
AL+ +P S LPIHQDGSCNGLQHYAALG D + A VNL ++P+DVY+ +A
Sbjct: 865 RNALQYQNPAEYPSRLPIHQDGSCNGLQHYAALGGDSIGAQQVNLEPSDRPSDVYTGVAE 924
Query: 592 RVHDIMRRDSNK-DPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRL 650
V + R++ + DP +AK L +I RK+VKQTVMT+VYGVT++GA Q++K+L
Sbjct: 925 FVKAAVAREAARGDP-------VAKFLDGRITRKIVKQTVMTNVYGVTFMGAMKQVRKQL 977
Query: 651 EEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYE--------- 701
+ T A Y A+ ALG +F A I WLGDCA I
Sbjct: 978 VDHYPDLSAEQKQTGALYIARKIFEALGTMFNGAHEIQYWLGDCASRITQSLSPEQIEEV 1037
Query: 702 -------------------------NQAVHWTTPLGLPVVQPY 719
V WTTPLG+PVVQPY
Sbjct: 1038 AKEVLTPTKSTTGSKGKLKDPSEKFRSTVIWTTPLGMPVVQPY 1080
>G3W635_SARHA (tr|G3W635) DNA-directed RNA polymerase (Fragment) OS=Sarcophilus
harrisii GN=POLRMT PE=3 SV=1
Length = 807
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 237/713 (33%), Positives = 365/713 (51%), Gaps = 92/713 (12%)
Query: 54 VKSLLLGWFEPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVME 113
+K L W E L + + E K H ++ +KQQAS+ P + L +++ + +L
Sbjct: 4 LKDLKSQWEEALMKTFK-ETKIHMSK-QKQQASLFPFLCLLKNKDYVDLMLQALFNLPPH 61
Query: 114 NEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTEADTEENLNNDKEKQRKFVN 173
+ L+ + +GM + N N + K + FV
Sbjct: 62 GDS----LIHLVMDLGMKVY--------------------------NKNLIQMKMKPFVL 91
Query: 174 GLIKRKKLKEVHVVLK----------------------------QEEVSPWSRAAQAKLG 205
+KRK + +H++ K QE+V W +LG
Sbjct: 92 DELKRKYMNYLHLLAKDTQLDSYLPREHWEALESETTICSDFFIQEKV--WPDVVLVQLG 149
Query: 206 SRLIELLIETAYVHSPVNQ-SADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLV 264
++L+E+++++ +H P N S+ + P H + S +K G I+ P
Sbjct: 150 TQLVEIMVQS--IHMPTNLFSSQAEKKLIPVLYHVYSFLS-------VKQIGFIKPHPSF 200
Query: 265 --LAGLEKCAKHXXXXXXXXXXXXK-KWKGYDKGGHLFLPSYIMRT-HGSRKQQDVMKNV 320
L C K W G ++ P+ +MR G+ + Q ++++
Sbjct: 201 SQLVADAACTKLTFDSSVMPMLCPPMPWISPHFGAYILHPTKLMRCLDGTVQHQQLLESC 260
Query: 321 KGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGG----NVAGLVDCENVPLPDKPP 376
+ + V +AL+ LG+ ++N +LD++ SI+ G +V + VP P
Sbjct: 261 PKQNLHAVLDALNQLGSCAWKVNQPVLDLIISIFNSKGSKKLDVPPPLSEAPVP-PSYQL 319
Query: 377 TEDLKQIQEWKYR--VRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGR 434
++D ++ K R + + K E +S R D KLS+A ++D+ F++PHN+DFRGR
Sbjct: 320 SKDASSSEKAKLRREIAQCHKTAREMYSLRTDALYKLSIAHHLRDQ-IFWFPHNMDFRGR 378
Query: 435 AYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFV 494
YP PH NHLGSD+ R +L FAEG+PLG +GL WLKIHL NL G +K S RL +
Sbjct: 379 TYPCPPHFNHLGSDMTRAILLFAEGKPLGPNGLDWLKIHLINL-TGLKKKESLQARLAYA 437
Query: 495 ENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGS 554
+ DI DSADNP+ G +WW+ ++P+Q LA C+ ++ A+RS P + ISH PIHQDGS
Sbjct: 438 NEILEDILDSADNPLTGRKWWMDVDEPWQALACCMEIARAVRSPDPEAYISHFPIHQDGS 497
Query: 555 CNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLA 614
CNGLQHYAALGRD + A +VNL+ + P DVYS +A V ++ +RD+ S +A
Sbjct: 498 CNGLQHYAALGRDVIGATSVNLMPCDVPQDVYSVVAQMVEELRKRDAAAGRS------IA 551
Query: 615 KVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTL 674
+VL I RKLVKQTVMT VYGVTY G R QI+KRL+E + + ++ A+ Y +++
Sbjct: 552 QVLEGFISRKLVKQTVMTVVYGVTYYGGRLQIEKRLKELDMFPKES-VWEASFYISQLVF 610
Query: 675 AALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
++L E+F R I WL A I+ V W TPLGLP++QPY K+++ ++
Sbjct: 611 SSLSEMFSGTREIQDWLTKSAHFISKSGSTVQWVTPLGLPIIQPYHKSQKIVI 663
>D3ZYB6_RAT (tr|D3ZYB6) DNA-directed RNA polymerase OS=Rattus norvegicus
GN=Polrmt PE=3 SV=2
Length = 1203
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 208/535 (38%), Positives = 297/535 (55%), Gaps = 28/535 (5%)
Query: 195 PWSRAAQAKLGSRLIELLIETAYVHSPVNQSA-DTPPDIRPAFRHGFKPQSRSPGQKILK 253
PWS +LG +L ELL++ V P + +A + P H + +S +
Sbjct: 535 PWSVPVLLQLGKQLAELLVQA--VQMPRSLAARHGAQNFIPVLYHVYSFRS-------YR 585
Query: 254 NYGVIQCDPLVLAGLEKCAKHXXXXXXXXXXXX---KKWKGYDKGGHLFLPSYIMR-THG 309
G+++ P LE A+ W G +L + IMR T G
Sbjct: 586 QVGILKPHPAFTHLLETAAEPTLTFETTEVPMLCPPLPWTSLHSGAYLLSSTKIMRATEG 645
Query: 310 SRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDC--E 367
+ + Q +++ Q+ +AL LGN R+NGRLLD+V I+ G + V
Sbjct: 646 TTQHQRLLERCPPAQLHGALDALTQLGNCAWRVNGRLLDLVLQIFRDKGCMRLGVPPPRS 705
Query: 368 NVPLPDK---PPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFY 424
P P K PP E + + + K E HS R + +LS+A+ ++D F+
Sbjct: 706 EAPRPAKHQLPPGSTPVHKSELRKELARCLKAAREMHSLRSEALYRLSLAQHLRDR-VFW 764
Query: 425 YPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEK 484
PHN+DFRGR YP PH NHLGSDL R LLEFAEGRPLG GL WLKIHL NL G ++
Sbjct: 765 LPHNMDFRGRTYPCPPHFNHLGSDLARALLEFAEGRPLGPRGLDWLKIHLINL-TGLRKR 823
Query: 485 LSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVI 544
S RL F + + +I DSADNP+ G +WW++A++P+Q LA C+ +++A+RS P + +
Sbjct: 824 DSLRMRLAFADEVMGEILDSADNPLTGQKWWMKADEPWQTLACCMEVAQAVRSPDPTAYV 883
Query: 545 SHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKD 604
SHLP+HQDGSCNGLQHYAALGRD + AA+VNL + P DVY E+A +V ++ ++D+ +
Sbjct: 884 SHLPVHQDGSCNGLQHYAALGRDSVGAASVNLTPSDLPQDVYREVATQVEELRQQDAKE- 942
Query: 605 PSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFT 664
+A+ L + RK+VKQTVMT VYGVT G R QI+KRL E + ++
Sbjct: 943 -----GLQVAQALEGFVSRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELSDFPQE-FVWE 996
Query: 665 AACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPY 719
A+ Y + +L E+F + R I WL + A +I++ V W TPLG+P++QPY
Sbjct: 997 ASHYLVRQVFKSLQEMFSSTRAIQRWLTESANLISHAGWPVEWVTPLGIPIIQPY 1051
>H0WXB7_OTOGA (tr|H0WXB7) DNA-directed RNA polymerase OS=Otolemur garnettii
GN=POLRMT PE=3 SV=1
Length = 1234
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 243/693 (35%), Positives = 364/693 (52%), Gaps = 55/693 (7%)
Query: 54 VKSLLLGWFEPLKEAVEAEQKAHQARSKKQ-QASIAPNVDSLPAAKVAVIVMHKMMSLVM 112
+K+L + W L A++ E KA QAR + + ++ P + L + ++M + +L
Sbjct: 432 LKNLRMQWETALLRALQ-ETKASQAREAHEGRPTLYPFLCLLSEHEFVQLLMQALHALPA 490
Query: 113 ENEEGCVQLVQAAVQIGMAL--EQEVRIHKFLEGNKSLQSKKTE------ADTEENLNND 164
+ E LV A ++GM + V+ K + L+ + T+ ADT+ +
Sbjct: 491 QGES----LVALAQELGMRAFNRRMVQKQKLNNQVQVLEQQYTQYLHLLAADTQ---VAE 543
Query: 165 KEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPVNQ 224
R++ L K L+E PW +LG +L E+L++ V P +
Sbjct: 544 PCLPRQYWEALEPPKALRE----------QPWPVPVLLQLGRQLAEILVQA--VQMPGSL 591
Query: 225 SADTPP-DIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGLEKCAKHXXXXXXXXX 283
+A + P H + +S + G+++ P + L K A+
Sbjct: 592 AAPQGSCRLIPVLYHVYSFRS-------YRQIGILKPHPAFVQLLAKAAEPTLTFETVDV 644
Query: 284 XXX---KKWKGYDKGGHLFLPSYIMR-THGSRKQQDVMKNVKGEQMQKVFEALDILGNTK 339
W G L P+ +MR G+ + Q +++ ++ +AL LGN
Sbjct: 645 PMLCPPLPWTSPHSGAFLLSPTKLMRAVEGTTQHQRLLERCPPAELHGALDALTQLGNCA 704
Query: 340 RRINGRLLDVVESIWAGGG--NVAGLVDCENVPLPDK---PPTEDLKQIQEWKYRVRKAK 394
R+NGR+LD+V ++ G G ++ P P + PP + E + + +
Sbjct: 705 WRVNGRVLDLVLELFRGKGCSHLGVPPPASEAPRPPEGHLPPDAPPARKAELRRELARCL 764
Query: 395 KMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLL 454
K+ E HS R D +LS+A+ ++ F+ PHN+DFRGR YP PH NHLGSDL R LL
Sbjct: 765 KVAREMHSLRADALYRLSLAQHLRHH-IFWLPHNMDFRGRTYPCPPHFNHLGSDLARALL 823
Query: 455 EFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRW 514
EFAEGRPLG GL WLKIHLANL G ++ S RL F + + DI DSAD P+ G +W
Sbjct: 824 EFAEGRPLGPHGLDWLKIHLANL-TGLKKRASLHERLAFADEVMDDILDSADQPMMGRKW 882
Query: 515 WLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAV 574
W+ A++P+Q LA C+ ++ A+R+ +P + +SHLP+HQDGSCNGLQHYAALGRD + AA+V
Sbjct: 883 WMGADEPWQALACCMEIARAVRTPNPATYVSHLPVHQDGSCNGLQHYAALGRDSVGAASV 942
Query: 575 NLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSV 634
NL+ + P DVYS +A +V +I RR K+ +A+VL I RK+VKQTVMT V
Sbjct: 943 NLMPLDLPQDVYSGVAAQV-EIFRRQDAKE-----GLQVAQVLEGFISRKVVKQTVMTVV 996
Query: 635 YGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDC 694
YGVT G R QI+KRL E + ++ A+ Y + +L E+F R I WL +
Sbjct: 997 YGVTRYGGRLQIEKRLRELSDFPQE-FVWEASHYLVRQVFHSLQEMFSGTRAIQHWLTES 1055
Query: 695 AKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
A++I+ AV W TPLG+P+VQPY + + LV
Sbjct: 1056 ARLISNAGSAVEWVTPLGIPIVQPYHQDSKVLV 1088
>D5GND9_TUBMM (tr|D5GND9) DNA-directed RNA polymerase OS=Tuber melanosporum (strain
Mel28) GN=GSTUM_00011240001 PE=3 SV=1
Length = 1416
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 243/713 (34%), Positives = 365/713 (51%), Gaps = 75/713 (10%)
Query: 54 VKSLLLGWF--------EPLKEAVEAEQKAHQARSKKQQASIAPNVDSLPAAKVAVIVMH 105
+ SLL W E LK AE+ +A + P + + K+A I +
Sbjct: 390 INSLLWEWHQALVPLIHEELKRVQHAEESGTKAAGAVDRCFYGPFMRVIEPEKLAAITII 449
Query: 106 KMMSLVMENEEGC-VQLVQAAVQIGMALEQEVRIHKFL-EGNKSLQSKKTEADTEENLNN 163
+++ N G ++ +A +Q+G +E E + + + + + ++A+ E +
Sbjct: 450 ELLRTHTLNGVGAGLKASRAVLQLGREVELEYQAQEVAKQRGEGFFANMSKAELETIFRD 509
Query: 164 DKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIETAYVHSPV- 222
+ F N + K K + L EE+ W + KLG LI +LI A + PV
Sbjct: 510 ----RSAFRNLISKSKSASD----LDFEEIPEWPNTVKVKLGGVLISMLIHVARI--PVE 559
Query: 223 ---------NQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLA--GLEKC 271
+S++ PAF+H ++ Q G+K+ GV++ P ++ G +
Sbjct: 560 AAVPGLTEGTESSEKIVQHLPAFQHCYEYQR---GRKL----GVVKLHPELVKRLGTDDL 612
Query: 272 AKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGE-QMQKVFE 330
W +D+GG+ + S ++R S +Q+ +K + +F
Sbjct: 613 NFTAIGKSLPMVVRPLPWTDWDEGGYFYTRSKVVRIRESVEQRQYVKAAAERGHLDHLFA 672
Query: 331 ALDILGNTKRRINGRLLDVVESIW---AGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWK 387
LD+LG T RIN R+ DVV +W + L N PL + P D K EW
Sbjct: 673 GLDVLGRTAWRINRRVFDVVLEVWNQEKAFAKIPALNPDINFPL-EPEPNADPKVRWEWA 731
Query: 388 YRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGS 447
+++ HS RCD K+ +AR E+ FY+PHN+DFRGRAYP+ P+LNH+G+
Sbjct: 732 REMKRVNTARKNNHSTRCDVNFKVEIARAFLFEE-FYFPHNIDFRGRAYPIPPNLNHIGN 790
Query: 448 DLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADN 507
DL RGLL F+E + +G++GLRW+KIHLANL G +K S+ R+ F E +I +I DSA+N
Sbjct: 791 DLSRGLLMFSEAKEVGETGLRWMKIHLANL--AGYDKASFSQRVAFTEENIENIHDSAEN 848
Query: 508 PVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRD 567
P+ GNRWWL+++DP+Q LA+C L+EAL ++P+ H+P+ QDG+CNGLQHYAALG D
Sbjct: 849 PLTGNRWWLKSDDPWQLLASCFALNEALSLNNPHEYKCHIPVAQDGTCNGLQHYAALGGD 908
Query: 568 ELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVK 627
A VNL + P DVY+ +A V + D+ + P A+ K D + RK+VK
Sbjct: 909 VAGARQVNLEPSDLPQDVYTGVAELVKASVELDAKRG---LPAAVALK---DLVTRKVVK 962
Query: 628 QTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGI 687
QTVMT+VYGVT+IGAR+QI+ +L+ + D + + + Y K ++ E+F A I
Sbjct: 963 QTVMTNVYGVTFIGARNQIENQLKCIESL-DQKDIPALSLYLTKKVFDSIQEMFTGASAI 1021
Query: 688 MSWLGDCAKVIAYE---NQAVH------------------WTTPLGLPVVQPY 719
WL CAK I+ NQ H WTTPL LPVVQPY
Sbjct: 1022 QDWLVTCAKRISRSVRPNQLEHLKDPKTGEDSVHFMTSVVWTTPLRLPVVQPY 1074
>G2QM62_THIHA (tr|G2QM62) DNA-directed RNA polymerase OS=Thielavia heterothallica
(strain ATCC 42464 / BCRC 31852 / DSM 1799)
GN=MYCTH_2310823 PE=3 SV=1
Length = 1402
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 249/754 (33%), Positives = 374/754 (49%), Gaps = 104/754 (13%)
Query: 52 PRVKSLLLGWFEPLKEAVEAEQKAHQA--------RSKKQQASIAPNVDSLPAAKVA-VI 102
P + S L W + L+ + EQ +A R ++ P++ PA ++A V
Sbjct: 397 PSLNSKLYDWHQALEARLIQEQAKVEASLSAPRKSREDMERCVYGPHLLQSPANRLAAVA 456
Query: 103 VMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEG-NKSLQSKKTEADTEENL 161
++ + SL M + + + Q+ E+++R + KS K+ A L
Sbjct: 457 ILSALSSLAMHGADKGIPVSNMVQQLAKIAEEDIRAQAIAKNLPKSKPRKQKSARQLMRL 516
Query: 162 NNDKEKQRKFVNGLIKRKKLKEVHVVLKQEE-VSPWSRAAQAKLGSRLIELLIETA--YV 218
++ + + + E S W A +AK G+ ++ L++TA V
Sbjct: 517 HDAAPTATTKSSPTATASPASQPATNSEPSEFASRWPIAIKAKFGAVILGALMDTAKIVV 576
Query: 219 HSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLAGL------EKCA 272
++ + ++PAF H + + G+++ GVIQ + ++ + E A
Sbjct: 577 EREHPETKEKVTQVQPAFTHTVQLKK---GRRV----GVIQPNRSLIELMKREPRGEALA 629
Query: 273 KHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQ--MQKVFE 330
+H + W +DKGG + PS ++R K Q + E+ M+++
Sbjct: 630 RHLPMVVEP-----EPWSKFDKGGFITSPSPLVRLKNHEKDQRIYAEAAIERGDMEQMMR 684
Query: 331 ALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKP-PTEDLKQIQEWKY 388
LD+LG T +IN + DV+ W G A L + +P+P +P T+D + + W
Sbjct: 685 GLDVLGKTAWKINRPVFDVMLEAWNTGEEFANLPALDPKIPIPPEPDSTDDPMKRRLWLR 744
Query: 389 RVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSD 448
V+ A+ HS RC +L +AR +D+ FY+PHN+DFRGRAYP+ +LNH+G+D
Sbjct: 745 AVKAAENEKSGLHSVRCFMNFQLEIARAFRDQ-TFYFPHNIDFRGRAYPIPTYLNHMGAD 803
Query: 449 LCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNP 508
RGLL FA+GRPLGKSGL WLK+HL+N+Y G +K S R F + ++ +IFDSADNP
Sbjct: 804 NMRGLLLFAKGRPLGKSGLAWLKVHLSNVY--GFDKASLKEREEFADRNLENIFDSADNP 861
Query: 509 VNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDE 568
+ G RWWL+AEDP+QCLA C L AL S P + +SHLP+HQDG+CNGLQHYAALG D
Sbjct: 862 LTGKRWWLQAEDPWQCLATCFELKAALSSPDPTAYVSHLPVHQDGTCNGLQHYAALGGDT 921
Query: 569 LEAAAVNLVAKEKPADVYSEIAVRVHDIMRRD-SNKDPSTFPNALLAKVLIDQIDRKLVK 627
A VNL+ ++PADVYS +A V + D +N + A+ + +I RK+VK
Sbjct: 922 WGAQQVNLLPGDRPADVYSAVAELVQKQVTEDLANGNE-------FAQAMDGKITRKVVK 974
Query: 628 QTVMTSVYGVTYIGARDQIKKRLE--------EKGLITDDRLLFTAACYAAKVTLAALGE 679
QTVMT+VYGVT++GA+ Q++K+L+ E GL + A Y A AL
Sbjct: 975 QTVMTNVYGVTFVGAKKQVQKQLDSLYPDIEKETGLSSG-----VLASYIAAKVFMALST 1029
Query: 680 VFEAARGIMSWLGD-----CAKVI----------------------------------AY 700
+F A I +WLG+ C V
Sbjct: 1030 MFRGAHDIQNWLGEIGGRVCRAVTPEQLDRIAEASGEKVGSGEESKSTKKKAKASSKAGD 1089
Query: 701 ENQAVH------WTTPLGLPVVQPYCKTERHLVS 728
E+ A H WTTPL +PVVQPY K+ L+S
Sbjct: 1090 EDLASHFRNTLVWTTPLRMPVVQPYRKSGTRLIS 1123
>B6HKC8_PENCW (tr|B6HKC8) DNA-directed RNA polymerase OS=Penicillium chrysogenum
(strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255)
GN=Pc21g02810 PE=3 SV=1
Length = 1353
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 236/670 (35%), Positives = 346/670 (51%), Gaps = 73/670 (10%)
Query: 95 PAAKVAVIVMHKMMSLVMENEEGCVQLVQAAVQIGMALEQEVRIHKFLEGNKSLQSKKTE 154
P A+ ++ M + + ++L A +G L+ E+ +L+ NKS+ + +
Sbjct: 425 PDRLAALTLLSVMSCFSRQGMDKGLKLSAIASIVGKELQDEIIADTYLKKNKSVDPSRLK 484
Query: 155 ADTEENLNNDKEKQRKFVNGLIKRKKLKEVHVVLKQEEVSPWSRAAQAKLGSRLIELLIE 214
A +E L N K+KQ G ++ + L V + ++E W +Q K+G L+ +L+E
Sbjct: 485 A-LKETLANRKDKQ-----GRLRWRSL--VEKMNAEDESIIWGSRSQVKVGGVLMSMLVE 536
Query: 215 TA----YVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKI---LKNYGVIQCDPLVLAG 267
A + PV + +++PAF H ++ I K ++ +P
Sbjct: 537 VAKAPVWTEDPVTKKRTL--NMQPAFDHSYQIHFGKRSGHIHMHSKIVDIVAKEPPA--- 591
Query: 268 LEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTH-GSRKQQDVMKNV-KGEQM 325
E A+H K W G GG+ S ++RT G Q +K V K + +
Sbjct: 592 -EVLARHLPMVCKP-----KPWTGPRSGGYKIYESSLVRTTPGELLQPAYLKAVLKDDGL 645
Query: 326 QKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCE-NVPLPDKP-PTEDLKQI 383
+++ LD+LG T RIN ++ +V+ W G V L ++ P+KP P D
Sbjct: 646 KEIRAGLDVLGGTGWRINQQVFEVMLEAWNDGKAVGKLAPLNPDLQAPEKPSPDADYAIQ 705
Query: 384 QEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLN 443
+EW +VR+ + + HS RC +L VAR + E FY PHN+DFRGRAYP+ P+LN
Sbjct: 706 REWNRKVRETENLRSGFHSVRCFQNFQLEVARAFRKE-TFYLPHNMDFRGRAYPLPPYLN 764
Query: 444 HLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGGIEKLSYDGRLGFVENHIHDIFD 503
+G+D RGLL F +G+ LG SG+RWLKI +ANL+ G +K S R F +H+ D+ D
Sbjct: 765 QMGADNSRGLLLFDKGKALGPSGMRWLKIQIANLF--GFDKASMSEREQFTMDHLDDVLD 822
Query: 504 SADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAA 563
SA+ + G RWWL+AEDP+Q LAAC L AL+ S P +SHLPIHQDGSCNGLQHYAA
Sbjct: 823 SANTGLRGRRWWLQAEDPWQLLAACCELRNALQLSEPTEYVSHLPIHQDGSCNGLQHYAA 882
Query: 564 LGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDR 623
LG D + A VNL ++P+DVY+ + V + + +D+ LAK+L +++R
Sbjct: 883 LGGDRVGAQQVNLEPSDRPSDVYTGVCEFVKEEIAQDAANGND------LAKLLDGRVNR 936
Query: 624 KLVKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEA 683
K+VKQTVMT+VYGVT++GA Q+K++L + +A+ Y + ALG +F
Sbjct: 937 KIVKQTVMTNVYGVTFLGATRQVKRQLIDYLPDLSGPERNSASFYISTKIFGALGSMFNG 996
Query: 684 ARGIMSWLGDCAKVIAYE----------------------------------NQAVHWTT 709
A I WLGDCA+ I V WTT
Sbjct: 997 AHEIQYWLGDCAQRITQSVTPEQIEELTQAALVPKDERDEDYSTSIDPEKSFRSTVIWTT 1056
Query: 710 PLGLPVVQPY 719
PLGLPVVQPY
Sbjct: 1057 PLGLPVVQPY 1066
>A6QUH4_AJECN (tr|A6QUH4) DNA-directed RNA polymerase OS=Ajellomyces capsulata
(strain NAm1 / WU24) GN=HCAG_01030 PE=3 SV=1
Length = 1397
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 221/577 (38%), Positives = 301/577 (52%), Gaps = 77/577 (13%)
Query: 196 WSRAAQAKLGSRLIELLIETAYVHSPV-----NQSADTPPDIRPAFRHGFKPQSRSPGQK 250
WS QAK+G+ L +L+ TA V P NQ T + AFR ++ + G +
Sbjct: 546 WSPVVQAKIGACLASMLLSTATVPVPTKDQKTNQQKQTD---QAAFRRVYQLER---GFR 599
Query: 251 ILKNYGVIQCDPLVLAGL------EKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYI 304
+ G + + ++ L E AKH + W GG L PS +
Sbjct: 600 V----GYVHANDYIIEKLRREPLGELLAKHLPMVCPP-----RPWTSSRGGGFLEYPSTV 650
Query: 305 MRT-HGSRKQQDVMKNVKGE-QMQKVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAG 362
MR G Q ++ + VF L +LG T +IN +L+V+ W G +A
Sbjct: 651 MRVKQGDISQLSYVETAAARGDLDTVFAGLTVLGKTGWKINRGVLNVMLEAWNSGEEIAN 710
Query: 363 LV-DCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKLSVARKMKDED 421
L + N+ P+KP T+D ++++ A HSQRC +L +AR ++E
Sbjct: 711 LAPENPNIIEPEKPDTDDRDILKDYYRAKMHATNARTGYHSQRCFQNFQLEIARAYRNE- 769
Query: 422 CFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYAGG 481
FY PHNLDFRGRAYPM P+ N +G+D CRGLL F++GR LG SGLRWLKIHLAN++ G
Sbjct: 770 TFYLPHNLDFRGRAYPMPPYFNQMGADHCRGLLLFSKGRELGASGLRWLKIHLANVF--G 827
Query: 482 IEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPN 541
+K S+ R F +H+ DI DSA N + G RWWL A DPFQCLAACI L+ A+ P
Sbjct: 828 FDKASFQEREQFAMDHLEDIRDSAINGLKGKRWWLDAGDPFQCLAACIELTNAMALEDPT 887
Query: 542 SVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDS 601
+SHLP+HQDGSCNGLQHYAALG D + A VNL ++P+D+Y+ +A V +++D+
Sbjct: 888 KFVSHLPVHQDGSCNGLQHYAALGGDVIGAQQVNLEPSDRPSDIYTGVAEHVKQSIQKDA 947
Query: 602 NKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRL-EEKGLITDDR 660
T AK+L D+I RK+VKQTVMT+VYGVT++GA Q++K+L + +
Sbjct: 948 ANGNET------AKLLEDKITRKIVKQTVMTNVYGVTFLGAIRQVRKQLVDHYPDLLHSG 1001
Query: 661 LLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVI---------------------- 698
+ A Y A+ ALG +F A I WLGDCA I
Sbjct: 1002 VAGECATYIARKIFVALGSMFTGAHDIQFWLGDCANRISQSLSPEQVEALSDEGNLKVVG 1061
Query: 699 ----------------AYENQAVHWTTPLGLPVVQPY 719
++ V WTTPL LPV QPY
Sbjct: 1062 RFQGAKKLAKNIKDPKSHFKSTVVWTTPLKLPVAQPY 1098