Miyakogusa Predicted Gene

Lj0g3v0120839.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0120839.2 Non Chatacterized Hit- tr|I1K0L7|I1K0L7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2960
PE=,47.92,0.000000004,seg,NULL,CUFF.7193.2
         (122 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3TA48_LOTJA (tr|I3TA48) Uncharacterized protein OS=Lotus japoni...    85   1e-14

>I3TA48_LOTJA (tr|I3TA48) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 394

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/88 (54%), Positives = 54/88 (61%), Gaps = 7/88 (7%)

Query: 1  MPVTLQSPPXXXXXXXXXXXXXIHRRIHSTPPPTLPFKSQRSFPLIRXXXXXXXXXXXXE 60
          MPVTLQSPP             IHRRIHSTPPPTLPFKSQRSFPLIR            E
Sbjct: 1  MPVTLQSPPSAAAFSSAAASSSIHRRIHSTPPPTLPFKSQRSFPLIRASSSSINTASITE 60

Query: 61 LDAVSAFSFLQLLPLSVHRFSWVYVDFQ 88
          LDAVSAFS  +++P +V     ++ DFQ
Sbjct: 61 LDAVSAFS--EIVPNTV-----IFDDFQ 81