Miyakogusa Predicted Gene

Lj0g3v0107019.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0107019.1 Non Chatacterized Hit- tr|D7SLZ5|D7SLZ5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,51.8,7e-18,Stm1_N,Stm1, N-terminal; seg,NULL; NUCLEAR RNA BINDING
PROTEIN A-LIKE PROTEIN,NULL; HYALURONIC
ACID-,NODE_30026_length_419_cov_520.326965.path2.1
         (134 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3STC5_LOTJA (tr|I3STC5) Uncharacterized protein OS=Lotus japoni...    88   1e-15

>I3STC5_LOTJA (tr|I3STC5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 370

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/126 (46%), Positives = 58/126 (46%), Gaps = 9/126 (7%)

Query: 1   MATMNPFDLLGDDAEDPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------ 54
           MATMNPFDLLGDDAEDP                                           
Sbjct: 1   MATMNPFDLLGDDAEDPPQLIAAEQLKAAAAAATAPPKKAAGAQDQGKQAKPAQMPSKPL 60

Query: 55  ---XXVRDARNEPSXXXXXXXXXXXXXXXXXXXXNRDFSNDENSFPASGAPDNLGPFEGD 111
                VRDARNEPS                    NRDFSNDENSFPASGAPDNLGPFEGD
Sbjct: 61  PPAQAVRDARNEPSRGGRGGARGAGRGFGRGRGFNRDFSNDENSFPASGAPDNLGPFEGD 120

Query: 112 SEKASE 117
           SEKASE
Sbjct: 121 SEKASE 126