Miyakogusa Predicted Gene

Lj0g3v0101129.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0101129.1 Non Chatacterized Hit- tr|I3SCE2|I3SCE2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,66.67,0.0000000000002,seg,NULL,CUFF.5668.1
         (165 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3SCE2_LOTJA (tr|I3SCE2) Uncharacterized protein OS=Lotus japoni...    80   3e-13
I3S126_LOTJA (tr|I3S126) Uncharacterized protein OS=Lotus japoni...    69   6e-10
G7K1P7_MEDTR (tr|G7K1P7) Replication factor A protein OS=Medicag...    68   1e-09
G7LDT6_MEDTR (tr|G7LDT6) Replication factor A protein OS=Medicag...    64   2e-08
G7I4W1_MEDTR (tr|G7I4W1) Replication factor A protein OS=Medicag...    58   1e-06
G7I5I4_MEDTR (tr|G7I5I4) Replication factor A protein OS=Medicag...    57   2e-06
G7INU3_MEDTR (tr|G7INU3) Putative uncharacterized protein OS=Med...    57   3e-06

>I3SCE2_LOTJA (tr|I3SCE2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 406

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/54 (66%), Positives = 45/54 (83%)

Query: 1   MFDSDANYLINKTCKEMLAEAKDPKSRECSPLMEQMLVGRELLFKVEKKSNTVF 54
           +FDSDA++LI K+CK+ML   KDPKS E +PLME+ LVG+ELLF+VEKKSN  F
Sbjct: 351 LFDSDAHHLIKKSCKDMLGNLKDPKSAEITPLMEEQLVGKELLFRVEKKSNIFF 404


>I3S126_LOTJA (tr|I3S126) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 303

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 72/122 (59%), Gaps = 6/122 (4%)

Query: 1   MFDSDANYLINKTCKEMLAEAKDPKSRECSPLMEQMLVGRELLFKVEKKSNTVFQFDDSY 60
           +FD+D   ++ K+C+E++  +K  KS E  P   + L+G+E +FKVEK  +   ++DDSY
Sbjct: 180 IFDTDCENMLKKSCRELVLGSK-GKSVEEYPDEIKALIGKEAIFKVEKSIDHGMKYDDSY 238

Query: 61  RIKRICDEPSIIEAFKAGGADHTPELATFAAPFTSVKLAEDGD---GSQGVSEASEISS- 116
           ++K+ICD+ SII+ FK      TP       PF S   ++D +     + +  +S+IS+ 
Sbjct: 239 KVKKICDDLSIIQLFKDKTKIQTPT-TLITDPFCSKSASDDQESVFSDKSIGSSSQISAV 297

Query: 117 PE 118
           PE
Sbjct: 298 PE 299


>G7K1P7_MEDTR (tr|G7K1P7) Replication factor A protein OS=Medicago truncatula
           GN=MTR_5g078250 PE=4 SV=1
          Length = 517

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 1/84 (1%)

Query: 1   MFDSDANYLINKTCKEMLAEAKDPKSRECSPLMEQMLVGRELLFKVEKKSNTVFQFDDSY 60
           +FD D   L+N  C  +++ AK   +    P  E+ L G+++LFKVEK +++   FD S+
Sbjct: 354 VFDGDMQNLLNTPCSSLVSVAKAENAGHYPPEFEK-LKGKKMLFKVEKCTSSSIFFDGSF 412

Query: 61  RIKRICDEPSIIEAFKAGGADHTP 84
           R+KR+CD+P+II++F   G   TP
Sbjct: 413 RVKRVCDDPAIIQSFHFVGGQCTP 436


>G7LDT6_MEDTR (tr|G7LDT6) Replication factor A protein OS=Medicago truncatula
           GN=MTR_8g062030 PE=4 SV=1
          Length = 559

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)

Query: 1   MFDSDANYLINKTCKEMLAEAKDPKSRECSPLMEQMLVGRELLFKVEKKSNTVFQFDDSY 60
           +FDSD +YL+ K C  ++A++K        P +  ML G+  LFKV+K   +   FD SY
Sbjct: 339 LFDSDVHYLLEKQCSVLVAKSKGDDVGFYPPEI-VMLKGKRFLFKVDKPVISGGFFDGSY 397

Query: 61  RIKRICDEPSIIEAFKAGGADHTP 84
           R+KR+C + SI+  F   G ++TP
Sbjct: 398 RVKRVCADSSIVAKFAMNGYNYTP 421


>G7I4W1_MEDTR (tr|G7I4W1) Replication factor A protein OS=Medicago truncatula
           GN=MTR_1g075850 PE=4 SV=1
          Length = 513

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 6/98 (6%)

Query: 37  LVGRELLFKVEKKSNTVFQFDDSYRIKRICDEPSIIEAFKAGGADHTPELATFAAPFTS- 95
           L G+ +LFK+EK +     FD S+R+KR+CD+P+II++F   G  +TP   + A  F   
Sbjct: 353 LKGKRMLFKIEKCTGRSIFFDGSFRVKRVCDDPAIIQSFDTLGGQYTPSKISVAKAFVDE 412

Query: 96  ---VKLAEDGD--GSQGVSEASEISSPEVLTPSLSAGP 128
                   DGD   S  V  + +I +P  +T  L   P
Sbjct: 413 TPPAVPHSDGDESASSDVFVSDQIVTPASVTNLLLISP 450


>G7I5I4_MEDTR (tr|G7I5I4) Replication factor A protein OS=Medicago truncatula
           GN=MTR_1g075940 PE=4 SV=1
          Length = 518

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 39/64 (60%)

Query: 31  PLMEQMLVGRELLFKVEKKSNTVFQFDDSYRIKRICDEPSIIEAFKAGGADHTPELATFA 90
           P   + L G+ +LFK+EK +     FD S+R+KR+CD+P+II++F   G  +TP   + A
Sbjct: 347 PAEFEKLKGKRMLFKIEKCTGRSIFFDGSFRVKRVCDDPAIIQSFDTLGGQYTPSKISVA 406

Query: 91  APFT 94
             F 
Sbjct: 407 KAFV 410


>G7INU3_MEDTR (tr|G7INU3) Putative uncharacterized protein OS=Medicago truncatula
           GN=MTR_2g008650 PE=4 SV=1
          Length = 486

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 44/76 (57%)

Query: 1   MFDSDANYLINKTCKEMLAEAKDPKSRECSPLMEQMLVGRELLFKVEKKSNTVFQFDDSY 60
           +FD +A  L NK+C +MLAE     S    P     ++G+  LFKVE K +   +F+ S+
Sbjct: 289 IFDKEATALFNKSCVDMLAEHGVAVSEGHLPPEIAGIIGKTFLFKVETKVDQNPRFEQSF 348

Query: 61  RIKRICDEPSIIEAFK 76
           R+++IC  P +I  FK
Sbjct: 349 RVRKICAMPDVINEFK 364