Miyakogusa Predicted Gene

Lj0g3v0093119.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0093119.1 Non Chatacterized Hit- tr|G7JW93|G7JW93_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,36.36,0.0000009,seg,NULL,CUFF.5110.1
         (235 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7JW93_MEDTR (tr|G7JW93) Putative uncharacterized protein OS=Med...    62   2e-07

>G7JW93_MEDTR (tr|G7JW93) Putative uncharacterized protein OS=Medicago truncatula
           GN=MTR_5g022270 PE=4 SV=1
          Length = 501

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 17/135 (12%)

Query: 113 NSYSLLHTNNSKKHAGG--------TIIGRKLF-DPESDEIIDLYSTHEPVYGINIGLKG 163
           NS + L TN++  H           T + +  F  PE ++  D Y  + P  G   G +G
Sbjct: 70  NSTADLGTNSAPPHVKTNSLPDLELTRVKKNPFCKPEEEDDNDFYLNYHP--GQTRGYEG 127

Query: 164 ---GVKIPEWFPVIYRPPENIILSQVEAAVGAYIYADSNYTGLKGSEVLVRTTDKKFSVD 220
                +IP W P  +RPP  + L+++ A + AY++    Y  L G E L+R+T K+ S  
Sbjct: 128 YDAPFEIPSWMPFTFRPPPAMKLNEICAYIAAYVFMPDAY--LNGEEELIRST-KEVSGY 184

Query: 221 RKGLKTLQPMAWVDQ 235
           RK LK+L P  +VDQ
Sbjct: 185 RKTLKSLMPRIFVDQ 199