Miyakogusa Predicted Gene

Lj0g3v0093109.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0093109.2 Non Chatacterized Hit- tr|B9SJ55|B9SJ55_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,45.05,0.00000000000001,seg,NULL; Linker_histone,Histone H1/H5;
H15,Histone H1/H5; ATHOOK,AT hook-like; Domain in histone
fa,CUFF.5136.2
         (415 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K7LD40_SOYBN (tr|K7LD40) Uncharacterized protein OS=Glycine max ...    74   1e-10
B9SJ55_RICCO (tr|B9SJ55) Putative uncharacterized protein OS=Ric...    73   2e-10
M4CYS2_BRARP (tr|M4CYS2) Uncharacterized protein OS=Brassica rap...    71   8e-10
Q6AWW7_ARATH (tr|Q6AWW7) At5g08780 OS=Arabidopsis thaliana GN=AT...    68   8e-09
Q9C599_ARATH (tr|Q9C599) Putative uncharacterized protein At5g08...    67   9e-09
R0GUP1_9BRAS (tr|R0GUP1) Uncharacterized protein OS=Capsella rub...    67   2e-08
D7M207_ARALL (tr|D7M207) Histone H1/H5 family protein OS=Arabido...    66   2e-08
M5Y276_PRUPE (tr|M5Y276) Uncharacterized protein (Fragment) OS=P...    64   9e-08

>K7LD40_SOYBN (tr|K7LD40) Uncharacterized protein OS=Glycine max PE=3 SV=1
          Length = 160

 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/47 (68%), Positives = 40/47 (85%)

Query: 1   MIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRKLC 47
           MI+RAI +L E  GSTEEAISEF++K+YEDLPWAH ++L  HLR+LC
Sbjct: 61  MIKRAIMELMEDSGSTEEAISEFIKKEYEDLPWAHEKVLDVHLRRLC 107


>B9SJ55_RICCO (tr|B9SJ55) Putative uncharacterized protein OS=Ricinus communis
          GN=RCOM_0843390 PE=3 SV=1
          Length = 640

 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 41/52 (78%)

Query: 1  MIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRKLCEVREI 52
          MI RAI+++NE  GST+EAIS F++++Y++LPW H   LG+HLRKLC  R I
Sbjct: 1  MIERAISEMNEEKGSTKEAISAFLKREYKNLPWGHESFLGHHLRKLCVNRYI 52


>M4CYS2_BRARP (tr|M4CYS2) Uncharacterized protein OS=Brassica rapa subsp.
           pekinensis GN=Bra009369 PE=3 SV=1
          Length = 424

 Score = 70.9 bits (172), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 39/52 (75%)

Query: 1   MIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRKLCEVREI 52
           MI  AIT+LNE  GS EEAISEF++ KYE LP+AH  LL +HL KL E REI
Sbjct: 61  MIFIAITELNEAGGSCEEAISEFIKSKYESLPFAHTSLLSHHLAKLVEKREI 112


>Q6AWW7_ARATH (tr|Q6AWW7) At5g08780 OS=Arabidopsis thaliana GN=AT5G08780 PE=2
           SV=1
          Length = 457

 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 40/52 (76%)

Query: 1   MIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRKLCEVREI 52
           MI  AI DLN+  G++E+AISEF++ KY++LP+AH  LL +HL KL E REI
Sbjct: 61  MIFIAIMDLNKEGGASEDAISEFIKSKYKNLPFAHTNLLSHHLAKLVEKREI 112


>Q9C599_ARATH (tr|Q9C599) Putative uncharacterized protein At5g08780
           OS=Arabidopsis thaliana GN=At5g08780 PE=3 SV=1
          Length = 463

 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 40/52 (76%)

Query: 1   MIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRKLCEVREI 52
           MI  AI DLN+  G++E+AISEF++ KY++LP+AH  LL +HL KL E REI
Sbjct: 61  MIFIAIMDLNKEGGASEDAISEFIKSKYKNLPFAHTNLLSHHLAKLVEKREI 112


>R0GUP1_9BRAS (tr|R0GUP1) Uncharacterized protein OS=Capsella rubella
           GN=CARUB_v10000937mg PE=4 SV=1
          Length = 452

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 38/52 (73%)

Query: 1   MIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRKLCEVREI 52
           MI  AI DLN   GS EEAISEF++ KY++LP+AH  LL +HL KL E +EI
Sbjct: 61  MIFVAIMDLNTEGGSCEEAISEFIKSKYKNLPFAHTSLLIHHLAKLVEKKEI 112


>D7M207_ARALL (tr|D7M207) Histone H1/H5 family protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_487721 PE=3 SV=1
          Length = 460

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 39/52 (75%)

Query: 1   MIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRKLCEVREI 52
           MI  AI DLNE  G++E+ ISEF++ KY++LP+AH  LL +HL KL E REI
Sbjct: 61  MIFIAIMDLNEEGGASEDVISEFIKSKYKNLPFAHKSLLSHHLAKLVEKREI 112


>M5Y276_PRUPE (tr|M5Y276) Uncharacterized protein (Fragment) OS=Prunus persica
          GN=PRUPE_ppa026922mg PE=4 SV=1
          Length = 198

 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 41/54 (75%)

Query: 1  MIRRAITDLNERDGSTEEAISEFVRKKYEDLPWAHARLLGNHLRKLCEVREIAS 54
          MI+RAI +L+E  G +E AISEF++++YEDLP AH   L +HLRKLCE R + +
Sbjct: 37 MIQRAIEELDEEGGLSEVAISEFIKREYEDLPVAHEGFLRHHLRKLCESRVVVN 90