Miyakogusa Predicted Gene
- Lj0g3v0091569.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0091569.1 Non Chatacterized Hit- tr|D7L0H8|D7L0H8_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,56.36,3e-19,GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE
1,NULL; coiled-coil,NULL; seg,NULL,CUFF.4990.1
(183 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
I1L5G8_SOYBN (tr|I1L5G8) Uncharacterized protein OS=Glycine max ... 97 3e-18
I1LP29_SOYBN (tr|I1LP29) Uncharacterized protein OS=Glycine max ... 96 6e-18
I3SKM5_LOTJA (tr|I3SKM5) Uncharacterized protein OS=Lotus japoni... 91 2e-16
F6HEA6_VITVI (tr|F6HEA6) Putative uncharacterized protein OS=Vit... 82 5e-14
B9I726_POPTR (tr|B9I726) Predicted protein OS=Populus trichocarp... 81 1e-13
M4DBW1_BRARP (tr|M4DBW1) Uncharacterized protein OS=Brassica rap... 77 2e-12
D7L0H8_ARALL (tr|D7L0H8) Putative uncharacterized protein OS=Ara... 75 6e-12
Q9SRQ0_ARATH (tr|Q9SRQ0) T21P5.12 protein OS=Arabidopsis thalian... 75 7e-12
R0I6C0_9BRAS (tr|R0I6C0) Uncharacterized protein OS=Capsella rub... 75 7e-12
A9PGR6_POPTR (tr|A9PGR6) Putative uncharacterized protein OS=Pop... 75 1e-11
R0H7A4_9BRAS (tr|R0H7A4) Uncharacterized protein (Fragment) OS=C... 74 2e-11
D7L055_ARALL (tr|D7L055) Putative uncharacterized protein OS=Ara... 74 2e-11
B9SDI1_RICCO (tr|B9SDI1) Putative uncharacterized protein OS=Ric... 74 3e-11
Q9LF51_ARATH (tr|Q9LF51) Glutamine-rich protein OS=Arabidopsis t... 72 9e-11
D7LX15_ARALL (tr|D7LX15) Putative uncharacterized protein OS=Ara... 72 9e-11
K4BJE7_SOLLC (tr|K4BJE7) Uncharacterized protein OS=Solanum lyco... 70 2e-10
M1CIG1_SOLTU (tr|M1CIG1) Uncharacterized protein OS=Solanum tube... 70 4e-10
M4DXW1_BRARP (tr|M4DXW1) Uncharacterized protein OS=Brassica rap... 69 5e-10
B9IPX6_POPTR (tr|B9IPX6) Predicted protein OS=Populus trichocarp... 65 8e-09
D5AE81_PICSI (tr|D5AE81) Putative uncharacterized protein OS=Pic... 64 2e-08
>I1L5G8_SOYBN (tr|I1L5G8) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 378
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 51 AAAISRFPSNIDAHLR-----------XXXXXXXXXXXXXXXXXXXXXXXXXSNHLXXXX 99
AAAISRFPSNIDAHLR SNHL
Sbjct: 56 AAAISRFPSNIDAHLRPIRPLNLQQNPNPNPNLNPAPNPNPNPILNLHQNPNSNHLPPQQ 115
Query: 100 XXXXXXXXXXXXXXXXKMVRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACESFSHYN 159
K+VRPGN MELQMAYQDAWRVCHPDFKRPFSSLEDACE Y+
Sbjct: 116 QPPQQQQQQQQ-----KIVRPGNQMELQMAYQDAWRVCHPDFKRPFSSLEDACERLLPYH 170
Query: 160 LLLMSDLLCSGRIL 173
++ + RIL
Sbjct: 171 VVADYEEEEDDRIL 184
>I1LP29_SOYBN (tr|I1LP29) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 368
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 51 AAAISRFPSNIDAHLRXXXXXXXXXXXXXXXXXXXXXXXX---------XSNHLXXXXXX 101
AAAISRFPSNIDAHLR SNHL
Sbjct: 50 AAAISRFPSNIDAHLRPIRPLNLQQNPNPSPNPAPNPNPNPLINLHQNPNSNHLPPPQQP 109
Query: 102 XXXXXXXXXXXXXXKMVRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACESFSHYNLL 161
K++RPGN MELQMAYQDAWRVCHPDFKRPFSSLEDACE Y+++
Sbjct: 110 SQQQQQQ-------KIIRPGNQMELQMAYQDAWRVCHPDFKRPFSSLEDACERLLPYHVV 162
Query: 162 LMSDLLCSGRIL 173
+ RIL
Sbjct: 163 ADYEEEEDDRIL 174
>I3SKM5_LOTJA (tr|I3SKM5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
Length = 240
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 45/57 (78%)
Query: 117 MVRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACESFSHYNLLLMSDLLCSGRIL 173
MVRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACE Y+++ + RIL
Sbjct: 1 MVRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACERLLPYHVVADYEAEEDDRIL 57
>F6HEA6_VITVI (tr|F6HEA6) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_16s0039g01020 PE=4 SV=1
Length = 381
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 45/58 (77%)
Query: 116 KMVRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACESFSHYNLLLMSDLLCSGRIL 173
K++RPG+ +ELQMAYQDAWRVCHPDFKRPFSSLEDACE Y+++ + RIL
Sbjct: 129 KVMRPGHQVELQMAYQDAWRVCHPDFKRPFSSLEDACERLLPYHVVADYEAEEDDRIL 186
>B9I726_POPTR (tr|B9I726) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_571396 PE=4 SV=1
Length = 350
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 54 ISRFPSNIDAHLRXXXXXXXXXXXXXXXXXXXXXXXXXSNHLXXXXXXXXXXXXXXXXXX 113
ISRFPSNIDAHLR +L
Sbjct: 51 ISRFPSNIDAHLRPPSNHRPLTLHQQNPNPNSNP----IPNLQQQQGSNLGQNAQHLQQQ 106
Query: 114 XXKMVRPG-NPMELQMAYQDAWRVCHPDFKRPFSSLEDACESFSHYNLLLMSDLLCSGRI 172
K +RP N +ELQMAYQDAWRVCHPDFKRPFSSLEDACE Y+++ + RI
Sbjct: 107 QQKGIRPQVNQVELQMAYQDAWRVCHPDFKRPFSSLEDACERLLPYHVVADYEAEEDDRI 166
Query: 173 L 173
L
Sbjct: 167 L 167
>M4DBW1_BRARP (tr|M4DBW1) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra013971 PE=4 SV=1
Length = 371
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 43/58 (74%)
Query: 116 KMVRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACESFSHYNLLLMSDLLCSGRIL 173
K++RP N +ELQ AYQDAWRVCHPDFKRPFSSLEDACE Y+++ + RIL
Sbjct: 124 KLMRPLNHIELQFAYQDAWRVCHPDFKRPFSSLEDACERLLPYHVVADYEAEEDDRIL 181
>D7L0H8_ARALL (tr|D7L0H8) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_896349 PE=4 SV=1
Length = 297
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 39/46 (84%)
Query: 116 KMVRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACESFSHYNLL 161
K++RP N +E+Q AYQDAWRVCHPDFKRPF+SLEDACE Y+++
Sbjct: 60 KLMRPSNQLEIQFAYQDAWRVCHPDFKRPFASLEDACERLLPYHVV 105
>Q9SRQ0_ARATH (tr|Q9SRQ0) T21P5.12 protein OS=Arabidopsis thaliana GN=T21P5.12
PE=2 SV=1
Length = 354
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 39/46 (84%)
Query: 116 KMVRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACESFSHYNLL 161
K++RP N +E+Q AYQDAWRVCHPDFKRPF+SLEDACE Y+++
Sbjct: 113 KLMRPSNQLEIQFAYQDAWRVCHPDFKRPFASLEDACERLLPYHVV 158
>R0I6C0_9BRAS (tr|R0I6C0) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10015200mg PE=4 SV=1
Length = 371
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 116 KMVRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACESFSHYNLLLMSDLLCSGRIL 173
K++RP N E+Q AYQDAWRVCHPDFKRPF+SLEDACE Y+++ + +IL
Sbjct: 124 KLMRPSNQSEMQFAYQDAWRVCHPDFKRPFASLEDACERLLPYHVVADYEAEEEAKIL 181
>A9PGR6_POPTR (tr|A9PGR6) Putative uncharacterized protein OS=Populus trichocarpa
PE=2 SV=1
Length = 428
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 116 KMVRPG-NPMELQMAYQDAWRVCHPDFKRPFSSLEDACESFSHYNLLLMSDLLCSGRIL 173
K +RP N +E+QMAYQDAWRVCHPDFKRPF SLEDACE Y+++ + RIL
Sbjct: 178 KGIRPQVNQVEIQMAYQDAWRVCHPDFKRPFGSLEDACERLLPYHVVADYEAEEDDRIL 236
>R0H7A4_9BRAS (tr|R0H7A4) Uncharacterized protein (Fragment) OS=Capsella rubella
GN=CARUB_v10001071mg PE=4 SV=1
Length = 414
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 43/58 (74%)
Query: 116 KMVRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACESFSHYNLLLMSDLLCSGRIL 173
K++RP N +ELQ AYQDAWRVCHPDFK+PFSSLEDACE Y+++ + RIL
Sbjct: 167 KLMRPLNHLELQCAYQDAWRVCHPDFKQPFSSLEDACERLLPYHVVADYEAEEDDRIL 224
>D7L055_ARALL (tr|D7L055) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_899603 PE=4 SV=1
Length = 131
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 34/38 (89%)
Query: 118 VRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACESF 155
+RP N +E+Q AYQDAWRVCHPDFKRPF+SLEDACES
Sbjct: 1 MRPSNQLEIQFAYQDAWRVCHPDFKRPFASLEDACESL 38
>B9SDI1_RICCO (tr|B9SDI1) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_1517980 PE=4 SV=1
Length = 400
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 116 KMVRPG-NPMELQMAYQDAWRVCHPDFKRPFSSLEDACESFSHYNLLLMSDLLCSGRIL 173
K +RP N +ELQMAYQDAWRVCHPD KRPFSSLEDACE Y+++ + RIL
Sbjct: 149 KGIRPPINQVELQMAYQDAWRVCHPDIKRPFSSLEDACERLLPYHVVADYEAEEDDRIL 207
>Q9LF51_ARATH (tr|Q9LF51) Glutamine-rich protein OS=Arabidopsis thaliana
GN=K3M16_80 PE=2 SV=1
Length = 369
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 43/58 (74%)
Query: 116 KMVRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACESFSHYNLLLMSDLLCSGRIL 173
K++RP N +ELQ AYQDAWRVCHP+FK+PFSSLEDACE Y+++ + RIL
Sbjct: 122 KLMRPLNHIELQCAYQDAWRVCHPNFKQPFSSLEDACERLLPYHVVADYEAEEDDRIL 179
>D7LX15_ARALL (tr|D7LX15) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_488617 PE=4 SV=1
Length = 370
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 43/58 (74%)
Query: 116 KMVRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACESFSHYNLLLMSDLLCSGRIL 173
K++RP N +ELQ AYQDAWRVCHP+FK+PFSSLEDACE Y+++ + RIL
Sbjct: 123 KLMRPLNHIELQCAYQDAWRVCHPNFKQPFSSLEDACERLLPYHVVADYEAEEDDRIL 180
>K4BJE7_SOLLC (tr|K4BJE7) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc03g097300.2 PE=4 SV=1
Length = 366
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 122 NPMELQMAYQDAWRVCHPDFKRPFSSLEDACESFSHYNLL 161
N +ELQMAY DAWRVCHPDFKRPFSSLEDACE Y+++
Sbjct: 120 NRVELQMAYHDAWRVCHPDFKRPFSSLEDACERLLPYHVV 159
>M1CIG1_SOLTU (tr|M1CIG1) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400026490 PE=4 SV=1
Length = 369
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 34/40 (85%)
Query: 122 NPMELQMAYQDAWRVCHPDFKRPFSSLEDACESFSHYNLL 161
N +ELQMAY DAWRVCHPDFKRPF+SLEDACE Y+++
Sbjct: 123 NRVELQMAYHDAWRVCHPDFKRPFTSLEDACERLLPYHVV 162
>M4DXW1_BRARP (tr|M4DXW1) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra021357 PE=4 SV=1
Length = 279
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 34/42 (80%)
Query: 120 PGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACESFSHYNLL 161
P N MELQ AYQDAWRVCHPD+KRPF SLEDACE Y+++
Sbjct: 53 PLNQMELQFAYQDAWRVCHPDYKRPFVSLEDACERLLPYHVV 94
>B9IPX6_POPTR (tr|B9IPX6) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_574012 PE=2 SV=1
Length = 238
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%)
Query: 128 MAYQDAWRVCHPDFKRPFSSLEDACESFSHYNLLLMSDLLCSGRIL 173
MAYQDAWRVCHPDFKRPF SLEDACE Y+++ + RIL
Sbjct: 1 MAYQDAWRVCHPDFKRPFGSLEDACERLLPYHVVADYEAEEDDRIL 46
>D5AE81_PICSI (tr|D5AE81) Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 365
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 118 VRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACESFSHYNLLLMSDLLCSGRIL 173
+R G EL+MA QDAW++C+PD KRPFSSLEDACE Y+++ + RIL
Sbjct: 96 IRQGFQTELEMAQQDAWKICNPDIKRPFSSLEDACERIFPYHVVADYEAEEDDRIL 151