Miyakogusa Predicted Gene

Lj0g3v0088669.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0088669.1 tr|G7INR2|G7INR2_MEDTR ATP-dependent DNA helicase
Q1 OS=Medicago truncatula GN=MTR_2g006440 PE=4
SV=,68.42,0.000000000000004,seg,NULL,TC70316.path1.1
         (58 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7INR2_MEDTR (tr|G7INR2) ATP-dependent DNA helicase Q1 OS=Medica...    66   5e-09
K7LVE9_SOYBN (tr|K7LVE9) Uncharacterized protein OS=Glycine max ...    56   4e-06
I1KUN5_SOYBN (tr|I1KUN5) Uncharacterized protein OS=Glycine max ...    56   6e-06

>G7INR2_MEDTR (tr|G7INR2) ATP-dependent DNA helicase Q1 OS=Medicago truncatula
            GN=MTR_2g006440 PE=4 SV=1
          Length = 1156

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 34/57 (59%)

Query: 2    TVKRQTKRTEIYDSEEEDYYHGCXXXXXXXXXXXXXXXXKTPCTNAGGRVLPQWTGS 58
            TVKRQ K+ EIY+SEEEDYYHGC                K   TNA GRVLPQWT S
Sbjct: 1100 TVKRQIKKAEIYESEEEDYYHGCLDEDLDCIDIDNVVLDKLTGTNAAGRVLPQWTAS 1156


>K7LVE9_SOYBN (tr|K7LVE9) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 1152

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/56 (46%), Positives = 30/56 (53%)

Query: 3    VKRQTKRTEIYDSEEEDYYHGCXXXXXXXXXXXXXXXXKTPCTNAGGRVLPQWTGS 58
            VKRQ ++  IYDS EEDY+ GC                +  C NA GRVLPQWT S
Sbjct: 1097 VKRQNRKAVIYDSPEEDYFQGCPDEDLDFDIIEIDALDQVTCKNAAGRVLPQWTAS 1152


>I1KUN5_SOYBN (tr|I1KUN5) Uncharacterized protein OS=Glycine max PE=4 SV=2
          Length = 1160

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/57 (45%), Positives = 30/57 (52%)

Query: 2    TVKRQTKRTEIYDSEEEDYYHGCXXXXXXXXXXXXXXXXKTPCTNAGGRVLPQWTGS 58
            TVKRQ ++  IYDS EEDY+ GC                +  C N  GRVLPQWT S
Sbjct: 1104 TVKRQNRKGVIYDSPEEDYFQGCPDEDLDFDIIEIDALDQVTCKNTAGRVLPQWTAS 1160