Miyakogusa Predicted Gene

Lj0g3v0084339.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0084339.1 Non Chatacterized Hit- tr|G7JS00|G7JS00_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,56.25,0.000002,
,CUFF.4422.1
         (121 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7JS00_MEDTR (tr|G7JS00) Putative uncharacterized protein OS=Med...    57   3e-06

>G7JS00_MEDTR (tr|G7JS00) Putative uncharacterized protein OS=Medicago truncatula
           GN=MTR_4g111960 PE=4 SV=1
          Length = 643

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/48 (56%), Positives = 32/48 (66%)

Query: 62  SLALDCVITFCFLLFHDIKFPSKSTQQPMVDFLSKGDPAQSTSENVST 109
           ++ LD   T CFLLFHDIK P  STQ P VD  S G+PAQST   +S+
Sbjct: 232 TILLDLATTLCFLLFHDIKLPPTSTQYPEVDCSSLGEPAQSTVLQLSS 279