Miyakogusa Predicted Gene

Lj0g3v0083669.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0083669.1 Non Chatacterized Hit- tr|G7IGQ6|G7IGQ6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,26.24,0.0000000002,RNA-binding domain, RBD,NULL; seg,NULL;
no description,Nucleotide-binding, alpha-beta plait;
RRM_1,R,CUFF.4384.1
         (327 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7IGQ6_MEDTR (tr|G7IGQ6) Putative uncharacterized protein OS=Med...    72   3e-10
G7KA54_MEDTR (tr|G7KA54) Putative uncharacterized protein OS=Med...    67   9e-09
G7L7R8_MEDTR (tr|G7L7R8) Putative uncharacterized protein OS=Med...    61   5e-07
K7KPN6_SOYBN (tr|K7KPN6) Uncharacterized protein OS=Glycine max ...    61   7e-07
G7JZN5_MEDTR (tr|G7JZN5) Putative uncharacterized protein OS=Med...    60   1e-06

>G7IGQ6_MEDTR (tr|G7IGQ6) Putative uncharacterized protein OS=Medicago truncatula
           GN=MTR_2g060030 PE=4 SV=1
          Length = 768

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 69/141 (48%)

Query: 159 TQINNSNSMLSKLAVAVLKDLERSSIIQRQLEGKGFRGVQVRPFGAKEKISSFQNEEDCK 218
           T +       S+  +A + D E   ++QR++   GF  + + P GA + +   ++E D  
Sbjct: 327 TVVVEEKQQASRCMIATVLDGEAIPVLQRRIYDAGFENLDIIPMGADKVLLKTEDESDVN 386

Query: 219 LLLQQIAGELGDMFESLEPMDPLKVPTGYLVWIKLWKVPIGFWNSDFFTKVTSNIGSYVC 278
           ++L + A      F ++       V      W++++ VP+  WN +FF     + G  + 
Sbjct: 387 VILSEAASFFASFFTNIVKWKKEVVFREKGAWVRIYGVPLQAWNLEFFKLCVYDCGRLLK 446

Query: 279 MDDPTCKEERFDYARILLLSS 299
           +DD T  + RFDYAR+L+ +S
Sbjct: 447 VDDYTVDKLRFDYARVLISTS 467


>G7KA54_MEDTR (tr|G7KA54) Putative uncharacterized protein OS=Medicago truncatula
           GN=MTR_5g062250 PE=4 SV=1
          Length = 773

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 60/117 (51%)

Query: 180 ERSSIIQRQLEGKGFRGVQVRPFGAKEKISSFQNEEDCKLLLQQIAGELGDMFESLEPMD 239
           E  +++Q ++E  GF  +++ P GA       ++E+D   +L +       MF ++   D
Sbjct: 289 EAITMVQNRVEDAGFVDLEIIPVGADRVFLCSKSEKDTVTMLDEAKEFFNLMFTNVTHWD 348

Query: 240 PLKVPTGYLVWIKLWKVPIGFWNSDFFTKVTSNIGSYVCMDDPTCKEERFDYARILL 296
              VP     W++L+ +P+  WN DFF     + GS++  D+ +    R DYAR+LL
Sbjct: 349 KETVPFRRGAWLRLYGIPLHAWNEDFFKLCVMDCGSFLRTDEVSLVRGRCDYARVLL 405


>G7L7R8_MEDTR (tr|G7L7R8) Putative uncharacterized protein OS=Medicago truncatula
           GN=MTR_8g045280 PE=4 SV=1
          Length = 800

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 58/116 (50%)

Query: 184 IIQRQLEGKGFRGVQVRPFGAKEKISSFQNEEDCKLLLQQIAGELGDMFESLEPMDPLKV 243
           ++Q ++E  GF+ + V P GA        ++ +   ++         +F ++   +   V
Sbjct: 393 VVQTRIEDAGFKDLDVIPLGADRVFMRSASDVEVSTIIAGARDFFDHIFLNIVRWEKQSV 452

Query: 244 PTGYLVWIKLWKVPIGFWNSDFFTKVTSNIGSYVCMDDPTCKEERFDYARILLLSS 299
           P     W++L+ +P+  WN +FF       G ++  D  + ++ERFDYARIL+ +S
Sbjct: 453 PFQRGAWLRLYGIPLHAWNENFFKLCVFECGRFLRSDGCSMEKERFDYARILIATS 508


>K7KPN6_SOYBN (tr|K7KPN6) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 425

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 64/139 (46%)

Query: 173 VAVLKDLERSSIIQRQLEGKGFRGVQVRPFGAKEKISSFQNEEDCKLLLQQIAGELGDMF 232
           V  LK++     ++ ++  +    V+ R  G    + S   +E  +L++Q        +F
Sbjct: 218 VGKLKEIMAVETLEDRIAWELGYNVRTRFLGDDMILLSGVTDEKAQLIIQTEKDSGNSLF 277

Query: 233 ESLEPMDPLKVPTGYLVWIKLWKVPIGFWNSDFFTKVTSNIGSYVCMDDPTCKEERFDYA 292
            SLE   P   P   +VWI++W  P+  W  + F K  S IG  + +DD T    R D A
Sbjct: 278 YSLEKWRPGCRPNNRVVWIQVWGFPLEVWEVEHFKKAISFIGDVIELDDDTEDRRRLDRA 337

Query: 293 RILLLSSEPGNTLRMMNKR 311
           RIL+ +  P +  R +  R
Sbjct: 338 RILVRTPLPPSIRREVAVR 356


>G7JZN5_MEDTR (tr|G7JZN5) Putative uncharacterized protein OS=Medicago truncatula
           GN=MTR_5g073130 PE=4 SV=1
          Length = 428

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 16/165 (9%)

Query: 150 IRKEWRKKETQINNSNSMLSKLAVAVLKDLERSSIIQRQLEGKGFRGVQVRPFGAKEKIS 209
           +  E RK E +I N    +S +   + +D     ++QR++   GF  +++ P G  +   
Sbjct: 170 VEGEKRKHEGEIFNEAEKISLVETVLNRD--SIPLLQRRIFDAGFNTLEIIPLGDDKVFL 227

Query: 210 SFQNEEDCKLLLQQIAGELGDMFESLEPMDPLKVPTGYL-----VWIKLWKVPIGFWNSD 264
              ++ +   LL Q+A    + F S     P++   G +      W++++  P+  WN  
Sbjct: 228 RTTDDGEVSFLLSQVAKFFNNFFTS-----PVRWNKGIVNRERGAWVRIYGTPLYAWNIK 282

Query: 265 FFTKVTSNIGSYVCMDDPTCKEERFDYARILLLSSEPGNTLRMMN 309
           FF     + G  +  D+ T +++R DYAR+L+ +S    TL ++N
Sbjct: 283 FFKLCVLDSGRLLQADEFTFEKQRLDYARVLVATS----TLEVIN 323