Miyakogusa Predicted Gene
- Lj0g3v0075799.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0075799.3 Non Chatacterized Hit- tr|H2Y878|H2Y878_CIOSA
Uncharacterized protein (Fragment) OS=Ciona savignyi
P,42.86,4.3,seg,NULL,CUFF.3815.3
(147 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
G7L742_MEDTR (tr|G7L742) RING-H2 finger protein ATL5F OS=Medicag... 96 6e-18
>G7L742_MEDTR (tr|G7L742) RING-H2 finger protein ATL5F OS=Medicago truncatula
GN=MTR_8g071820 PE=4 SV=1
Length = 786
Score = 95.5 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 56/104 (53%), Positives = 67/104 (64%), Gaps = 3/104 (2%)
Query: 1 MAIPLQTXXXXXXXXXXXXXXFQNHNPNPNPLHSFLI--IPTKSPLRFSGHRNFTHRSPA 58
MA+ LQT F NPN N +++FLI P KS L+FS HRN THRSPA
Sbjct: 1 MAVLLQTHYTLSLPSPRYPYLFSIRNPNSN-VYNFLIPTTPLKSQLQFSNHRNPTHRSPA 59
Query: 59 SLTAAARREPSETTPLKLPQALVRLAVSAALFLCLGRFSRSSKL 102
S +A+RREPSETT LKLP+ALVR+ VS ALFLC G + S+ L
Sbjct: 60 SPVSASRREPSETTSLKLPRALVRVTVSIALFLCCGIRACSASL 103