Miyakogusa Predicted Gene

Lj0g3v0074849.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0074849.1 Non Chatacterized Hit- tr|A5BWP2|A5BWP2_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,28.57,0.0003,no
description,DNA-binding pseudobarrel domain,CUFF.3749.1
         (135 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3SYK9_LOTJA (tr|I3SYK9) Uncharacterized protein OS=Lotus japoni...   266   2e-69

>I3SYK9_LOTJA (tr|I3SYK9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 281

 Score =  266 bits (680), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 127/132 (96%), Positives = 128/132 (96%)

Query: 1   MEPIGSCSDRPPESFSIPIDLREEHMRLPAFFYGKKKSQIKNDVELTDPMGNCVTIGVMT 60
           MEPIGSCSDRPPESFSIPIDLREEHMRLPAFFY KKKSQIKNDVELTDPMGNCVTIGVMT
Sbjct: 1   MEPIGSCSDRPPESFSIPIDLREEHMRLPAFFYEKKKSQIKNDVELTDPMGNCVTIGVMT 60

Query: 61  GSSEGVLWDAVPKLVKFYGLKKNHDMVCVYEGENRFRIEIFDENKKHFPYPIPVKQEYEE 120
           GS EG LW AVPKLVKFYGLKKNHDMVCVYEGENRFRIEIFDENKKHFPYPIPV+QEYEE
Sbjct: 61  GSLEGFLWYAVPKLVKFYGLKKNHDMVCVYEGENRFRIEIFDENKKHFPYPIPVRQEYEE 120

Query: 121 PPKEIVDLSSDT 132
           PPKEIVDLSSDT
Sbjct: 121 PPKEIVDLSSDT 132