Miyakogusa Predicted Gene
- Lj0g3v0070689.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0070689.2 tr|A8CF51|A8CF51_BRACM AP2/EREBP transcription
factor OS=Brassica campestris GN=BcAP2 PE=2 SV=1,32.65,5e-19,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.3433.2
(232 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9T5K4_RICCO (tr|B9T5K4) Protein BABY BOOM, putative OS=Ricinus ... 107 4e-21
F6HRZ0_VITVI (tr|F6HRZ0) Putative uncharacterized protein OS=Vit... 104 3e-20
I1J503_SOYBN (tr|I1J503) Uncharacterized protein OS=Glycine max ... 95 2e-17
M5W6N6_PRUPE (tr|M5W6N6) Uncharacterized protein OS=Prunus persi... 93 6e-17
K7L9D0_SOYBN (tr|K7L9D0) Uncharacterized protein OS=Glycine max ... 92 1e-16
K7LEY8_SOYBN (tr|K7LEY8) Uncharacterized protein OS=Glycine max ... 87 4e-15
M4CPC7_BRARP (tr|M4CPC7) Uncharacterized protein OS=Brassica rap... 82 1e-13
B9HFM2_POPTR (tr|B9HFM2) AP2 domain-containing transcription fac... 76 1e-11
D7M2X9_ARALL (tr|D7M2X9) Putative uncharacterized protein OS=Ara... 64 4e-08
M4CXS9_BRARP (tr|M4CXS9) Uncharacterized protein OS=Brassica rap... 62 2e-07
A8CF51_BRACM (tr|A8CF51) AP2/EREBP transcription factor OS=Brass... 61 3e-07
Q4ABY9_BRACM (tr|Q4ABY9) 117M18_31 OS=Brassica campestris GN=117... 60 6e-07
>B9T5K4_RICCO (tr|B9T5K4) Protein BABY BOOM, putative OS=Ricinus communis
GN=RCOM_0021080 PE=4 SV=1
Length = 527
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 114/255 (44%), Gaps = 42/255 (16%)
Query: 5 TNWLTFSLTPMEIMLRSSSTDSQFLQYDTASSS----HCFLDNFYANVLTNPKSEMLNQN 60
TNWL+FSL+PME MLR SST+SQF+ Y+ +S++ H F+DNFYAN NPK Q
Sbjct: 6 TNWLSFSLSPME-MLR-SSTESQFISYEGSSTATPSPHYFIDNFYANGWGNPKEA---QG 60
Query: 61 EMQRVTEGSILTSLMDDSSPPQIENQPPMAVVSKLEDFFESHQGEVMQXXXXXXXXXXQI 120
E SILTS +D P+ +Q V KLEDF V
Sbjct: 61 ATTMAAETSILTSFID----PETHHQQ----VPKLEDFLGDSSSIVRYSDNSQTDTQDSS 112
Query: 121 YEHV--PPPPGFFNGEQDLKAAVDVAA---EFRAKLDDSVEIPKNDVVPGGEFGVNSAEG 175
H+ +F+ +QDLKA A +++DDS I + + GGEF +S +
Sbjct: 113 LTHIYDQGSAAYFSEQQDLKAIAGFQAFSTNSGSEVDDSASIARTHL--GGEFMGHSIDS 170
Query: 176 NKDETLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH------------------TFGQR 217
+ ++ L + TFGQR
Sbjct: 171 SGNDQLGGFSNCTAANNALSLAVNNNNNNNGNQSATNSKTIAPVIESDCPKKIADTFGQR 230
Query: 218 TSIYRGVTRHRWTGR 232
TSIYRGVTRHRWTGR
Sbjct: 231 TSIYRGVTRHRWTGR 245
>F6HRZ0_VITVI (tr|F6HRZ0) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_00s1291g00010 PE=4 SV=1
Length = 513
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 120/263 (45%), Gaps = 47/263 (17%)
Query: 1 MAGATNWLTFSLTPMEIMLRSSSTDSQFLQYDT--ASSSHCFLDNFYANVLTNPKSEML- 57
MA TNWL+FSL+PME MLR S +SQ + Y++ A+S H ++DNFYAN TNPK +++
Sbjct: 1 MAPVTNWLSFSLSPME-MLRCS--ESQIMPYESSSAASPHYYVDNFYANGWTNPKPQVMY 57
Query: 58 --------NQNEMQRVTEGSILTSLMDDSSPPQIENQPPMAVVSKLEDFFESHQGEVMQX 109
+ +T S+LTS +D PQ+ +Q V KLEDF +++
Sbjct: 58 TEGDDYQVKEAATPSITNSSMLTSFVD----PQLHHQQ----VPKLEDFLGGDSSSLVRY 109
Query: 110 XXXXX----XXXXQIYEHVPPPPGFFNGEQDLKAAVDVAAEFRA-------KLDDSVEIP 158
IY+H +FN +QDLK A+ A F+A +++DS I
Sbjct: 110 SESQTETQDSSLTHIYDH---GSAYFNEQQDLK-AIAATAGFQAFSTNSGSEVEDSSSIG 165
Query: 159 KNDVVPGGEFGVNSAEGNKDETLXXXXXXXXX---------XXXXXXXXXXXXXXXXXXX 209
+ + +F +S E +
Sbjct: 166 RTQLA-SSDFPGHSIESGNELAFSHCPTGALSLGVTTTTTTTQRSDQQAIVSADSDCSKK 224
Query: 210 XXHTFGQRTSIYRGVTRHRWTGR 232
TFGQRTSIYRGVTRHRWTGR
Sbjct: 225 IADTFGQRTSIYRGVTRHRWTGR 247
>I1J503_SOYBN (tr|I1J503) Uncharacterized protein OS=Glycine max PE=4 SV=2
Length = 510
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 110/256 (42%), Gaps = 44/256 (17%)
Query: 1 MAGATNWLTFSLTPMEIMLRSSSTDSQFLQYDTA---SSSHCFLDNFYANVLTNPK---S 54
MA ATNWL+FSL+PME MLR+S + QFLQYD A SS H +LDN Y N N
Sbjct: 1 MARATNWLSFSLSPME-MLRTS--EPQFLQYDAASATSSHHYYLDNLYTNGWGNGSLKFE 57
Query: 55 EMLNQNEMQRVTEGSILTSLMDDSSPPQIENQPPMAVVSKLEDFFESHQGEVMQXXXXXX 114
+ LN +++ V +SS + + PP KLEDF VM+
Sbjct: 58 QNLNHSDVSFV-----------ESSSQSVGHVPPPP--PKLEDFL-GDSSAVMRYSDSQT 103
Query: 115 XXXXQIYEHV----------PPPPGFFNG-EQDLKAAVDVAA---EFRAKLDDSVEIPKN 160
H+ +F G +QDLKA A +++DDS I K
Sbjct: 104 ETQDSSLTHIYDHHHHHHHHHGSTSYFGGDQQDLKAITGFQAFSTNSGSEVDDSASIGK- 162
Query: 161 DVVPGGEFGVNSAEGNKDE----TLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTFGQ 216
EFG +S E + +E + TFGQ
Sbjct: 163 --AQASEFGTHSIESSGNEFAAFSGGTTGTLSLAVALSSEKAVVAAESNSSKKIVDTFGQ 220
Query: 217 RTSIYRGVTRHRWTGR 232
RTSIYRGVTRHRWTGR
Sbjct: 221 RTSIYRGVTRHRWTGR 236
>M5W6N6_PRUPE (tr|M5W6N6) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa019186mg PE=4 SV=1
Length = 543
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 117/275 (42%), Gaps = 48/275 (17%)
Query: 1 MAGATNWLTFSL-TPMEIMLRSSSTDSQFLQYDTASSS--HCFLDNFYANVLTNPKSEML 57
MA A+NWL+FSL +PME MLRSS ++S F+ YDT+S++ H FLDNFYAN + +
Sbjct: 1 MAPASNWLSFSLMSPME-MLRSSESESPFVPYDTSSTASPHYFLDNFYANENSTESACAY 59
Query: 58 NQNEMQRVTEGSILTSLMDDSS-------------------------PPQIENQPPMAVV 92
++++ E S++ + SS PQ +QP +
Sbjct: 60 VFSQLETELELSLIIYIPSLSSFWVIADSNLTGSRENPKTFSSVCFIDPQSHHQP----I 115
Query: 93 SKLEDFFESHQGEVM----QXXXXXXXXXXQIYEHVPPPPGFFNGEQDLKAAVDVAA--- 145
KLEDF V Q +Y+ G +QDLKA A
Sbjct: 116 PKLEDFLGDSSSMVRYSESQTETQDSSSLTHMYDQSSAYFGDHQQQQDLKAITGFQAFST 175
Query: 146 EFRAKLDDSVEIPKNDVVPGGEFGVNSAEGNKDET--------LXXXXXXXXXXXXXXXX 197
++++DS + + + GG+F +S E N +E
Sbjct: 176 NSGSEVEDSATMARTTQLTGGDFTGHSIESNGNELGGGFSSCGTNALSLGVTTQSSSQSK 235
Query: 198 XXXXXXXXXXXXXXHTFGQRTSIYRGVTRHRWTGR 232
TFGQRTSIYRGVTRHRWTGR
Sbjct: 236 AIVPADSDGSKKIADTFGQRTSIYRGVTRHRWTGR 270
>K7L9D0_SOYBN (tr|K7L9D0) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 447
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 96/243 (39%), Gaps = 78/243 (32%)
Query: 1 MAGATNWLTFSLTPMEIMLRSSSTDSQFLQYDTASSSHCFLD-NFYANVLTNPKSEMLNQ 59
MAGATNWLTFSLT ME+ QF YDT + SHCF D NFY TN KS M +Q
Sbjct: 1 MAGATNWLTFSLTHMEMQ--------QFGPYDTTTHSHCFNDSNFYG--WTNSKSVMDSQ 50
Query: 60 NEMQRVTEGSILTSLMDDSSPPQIENQPPMAVVSKLEDFFESHQGEVMQXXXXXXXXXXQ 119
+E Q++ V K+EDF+
Sbjct: 51 SETQQL-------------------------AVPKMEDFY-------------------- 65
Query: 120 IYEHVPPPPGFFNGEQDLKAAVDVAAEFRA--------KLDDSVEIPK-NDVVPGGEFGV 170
F + +QDLKA + F+A ++DDS V P G
Sbjct: 66 ----------FGDHQQDLKAM--IVPGFKALSGTNSGSEVDDSTSNKTVTRVAPAALGGA 113
Query: 171 NSAEGN-KDETLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTFGQRTSIYRGVTRHRW 229
+S E N K L HTFGQRTSIYRGVTRHRW
Sbjct: 114 HSGESNCKGSALTLCDVAANGSDDSNNKAVVAVGFDTRKKVAHTFGQRTSIYRGVTRHRW 173
Query: 230 TGR 232
TGR
Sbjct: 174 TGR 176
>K7LEY8_SOYBN (tr|K7LEY8) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 265
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 102/251 (40%), Gaps = 42/251 (16%)
Query: 4 ATNWLTFSLTPMEIMLRSSSTDSQFLQYDTA---SSSHCFLDNFYANVLTNPKSEMLNQN 60
+TNWL+FSL+PM+ MLR + + QF+QYD A SS H +LDN Y N N S QN
Sbjct: 5 STNWLSFSLSPMD-MLR--TPEPQFVQYDAASDTSSHHYYLDNLYTNGWGNG-SLKFEQN 60
Query: 61 EMQRVTEGSILTSLMDDSSPPQIENQPPMAVVSKLEDFFESHQGEVMQXXXXXXXXXXQI 120
+S +PP KLEDF VM+
Sbjct: 61 LNHSDVSFVQSSSQSVSHAPP------------KLEDFL-GDSSAVMRYSDSQTETQDSS 107
Query: 121 YEHV--------PPPPGFFNGE-QDLKAAVDVAA---EFRAKLDDSVEIPKNDVVPGGEF 168
H+ +F G+ QDLKA A +++DDS I K G EF
Sbjct: 108 LTHIYDHHHHHHHGSSAYFGGDHQDLKAITGFQAFSTNSGSEVDDSASIGK---AQGSEF 164
Query: 169 GVNSAEGNKDE-------TLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTFGQRTSIY 221
G +S E + +E T TFGQRTSIY
Sbjct: 165 GTHSIESSVNEFAAFSGGTNTGGTLSLAVAQSSEKAVAAAAESDRSKKVVDTFGQRTSIY 224
Query: 222 RGVTRHRWTGR 232
RGVTRHRWTGR
Sbjct: 225 RGVTRHRWTGR 235
>M4CPC7_BRARP (tr|M4CPC7) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra006065 PE=4 SV=1
Length = 556
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 112/280 (40%), Gaps = 58/280 (20%)
Query: 1 MAGATNWLTFSLTPMEIMLRSSSTDSQFLQYDTASSSHC--FLDNFYANVLTNPKSEMLN 58
MA TNWLTFSL+PME MLRSS SQF+ YD +S++ LDNFY P+ E
Sbjct: 1 MAPMTNWLTFSLSPME-MLRSSD-QSQFVSYDASSAASSPYLLDNFYGWTNQKPQEEEEA 58
Query: 59 QNEMQRVTEGSILTSLMDDSSPPQIENQPPMAVVSKLEDFF-ESHQGEVMQXXXXXXXXX 117
Q + + +ILTS +D + Q N P KLEDF + + Q
Sbjct: 59 QITAS-MADSTILTSFVDSQNHSQ--NHIP-----KLEDFLGDFRYSDNSQTETQDSSSL 110
Query: 118 XQIYE--HVPPPPGFFNGE-QDLKAAVDVAAEFR----AKLDDSVEIPKNDV-------- 162
IY+ H GF++ D KA F +++DDSV + + +
Sbjct: 111 THIYDPRHHQNQTGFYSDHSHDFKAMTGFQTAFSTNSGSEVDDSVSMSRTHLAGEYLGHV 170
Query: 163 ----------VPGG-------EFGVNS-------------AEGNKDETLXXXXXXXXXXX 192
+ GG GVN+ A N + +
Sbjct: 171 VESSGQELGFIHGGANTGGALSLGVNTNNTNNQISEYNYRANNNGERIINNNNREKTDSE 230
Query: 193 XXXXXXXXXXXXXXXXXXXHTFGQRTSIYRGVTRHRWTGR 232
TFGQRTSIYRGVTRHRWTGR
Sbjct: 231 KEKPVVAVERSDSSNKKVADTFGQRTSIYRGVTRHRWTGR 270
>B9HFM2_POPTR (tr|B9HFM2) AP2 domain-containing transcription factor OS=Populus
trichocarpa GN=RAP20 PE=4 SV=1
Length = 489
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 98/234 (41%), Gaps = 37/234 (15%)
Query: 18 MLRSSSTDSQFLQYDTASSS--HCFLDNFYANVLTNPKSEMLNQNEMQRVTEGSILTSLM 75
MLRSS +SQF+ Y+++SS+ H DNFYA+ +PK + M +ILTS +
Sbjct: 3 MLRSS--ESQFMSYESSSSASPHYLFDNFYADGWAHPKESQVTTTTM--AENSNILTSFI 58
Query: 76 DDSSPPQIENQPPMAVVSKLEDFFESHQGEVMQXXXXXXXXXXQ------IYEHVPPPPG 129
+P Q V KLEDF + Q IY+H
Sbjct: 59 GPETPHQ--------QVPKLEDFLGDSSSSINVRYSDNSQTETQDSSLTHIYDHQGSAAA 110
Query: 130 FFNGEQDLKAAVDVAA---EFRAKLDDSVEIPKNDV----VPGGEFGV-NSAE---GNKD 178
+FN +QDLKA A +++DDS I V G E G N+A G +
Sbjct: 111 YFNEQQDLKAIAGFQAFSTNSGSEVDDSASIAPTQVGGIESTGNELGFSNNAALSLGVNN 170
Query: 179 ETLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTFGQRTSIYRGVTRHRWTGR 232
+T TFGQRTSIYRGVTRHRWTGR
Sbjct: 171 DT------SNNQGGSTEKLAIVSADNDCSKKIADTFGQRTSIYRGVTRHRWTGR 218
>D7M2X9_ARALL (tr|D7M2X9) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_909007 PE=4 SV=1
Length = 576
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 1 MAGATNWLTFSLTPMEIMLRSSSTDSQFLQYDTASSSHC---FLDNFYANVLTNPKSEML 57
MA TNWLTFSL+PME MLRSS SQF+ YD +S++ LDNFY TN K +
Sbjct: 1 MAPMTNWLTFSLSPME-MLRSSD-QSQFVSYDASSAASSSPYLLDNFYG--WTNQKPQEF 56
Query: 58 NQNEMQ----RVTEGSILTSLMDDSSPPQIENQPPMAVVSKLEDFFESHQGEVM----QX 109
+ E Q + + +ILT+ +D S Q N P KLEDF V
Sbjct: 57 FKEEAQLAAASMADSTILTTFVDPQSHSQ--NHIP-----KLEDFLGDSSSIVRFSDNSQ 109
Query: 110 XXXXXXXXXQIYE-----HVPPPPGFFNGEQDLKAAVDVAAEFR----AKLDDSVEIPKN 160
QIY+ H P GF++ D K F +++DDS I +
Sbjct: 110 TDTQDSSLTQIYDPRHHHHNPNQTGFYSDHHDFKTMAGFQTAFSTNSGSEVDDSASIGRT 169
Query: 161 DVVPGGEF 168
+ GE+
Sbjct: 170 HLT--GEY 175
>M4CXS9_BRARP (tr|M4CXS9) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra009026 PE=4 SV=1
Length = 574
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 1 MAGATNWLTFSLTPMEIMLRSSSTDSQFLQYDTASSSHC---FLDNFYANVLTNPKSEML 57
MA TNWLTFSL+PME MLRSS SQF+ YD +S++ LDNFY P+
Sbjct: 1 MAPMTNWLTFSLSPME-MLRSSDDQSQFVSYDASSAASSSPYLLDNFYGWTNQKPQELFF 59
Query: 58 NQNEMQRVTEGSILTSLMDDSSPPQIENQPPMAVVSKLEDFF 99
+ + + +ILT+ +D + Q + + KLEDF
Sbjct: 60 KEAAAASMADSTILTTFVDQQTHSQ-------SHIPKLEDFL 94
>A8CF51_BRACM (tr|A8CF51) AP2/EREBP transcription factor OS=Brassica campestris
GN=BcAP2 PE=2 SV=1
Length = 323
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 1 MAGATNWLTFSLTPMEIMLRSSSTDSQFLQYDTASSSH---CFLDNFYANVLTNPKSEML 57
MA TNWLTFSL+PME MLRSS SQF+ YD +S++ LDNFY P+
Sbjct: 1 MAPMTNWLTFSLSPME-MLRSSDDQSQFVSYDASSAASSSPYLLDNFYGWTNQKPQELFF 59
Query: 58 NQNEMQRVTEGSILTSLMDDSSPPQIENQPPMAVVSKLEDFF 99
+ + + +ILT+ +D + Q + + KLEDF
Sbjct: 60 KEAAAASMADSTILTTFVDQQTHSQ-------SHIPKLEDFL 94
>Q4ABY9_BRACM (tr|Q4ABY9) 117M18_31 OS=Brassica campestris GN=117M18_31 PE=4 SV=1
Length = 563
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 84/178 (47%), Gaps = 22/178 (12%)
Query: 1 MAGATNWLTFSLTPMEIMLRSSSTDSQFLQYDTASSSHC--FLDNFYANVLTNPKSEMLN 58
MA TNWLTFSL+PME MLRSS SQF+ YD +S++ LDNFY P+ E
Sbjct: 1 MAPMTNWLTFSLSPME-MLRSSD-QSQFVSYDASSAASSPYLLDNFYGWTNQKPQEEEEA 58
Query: 59 QNEMQRVTEGSILTSLMDDSSPPQIENQPPMAVVSKLEDFF-ESHQGEVMQXXXXXXXXX 117
Q + + +ILTS +D + Q N P KLEDF + + Q
Sbjct: 59 Q-ITASMADSTILTSFVDSQNHSQ--NHIP-----KLEDFLGDFRYSDNSQTETQDSSSL 110
Query: 118 XQIYE--HVPPPPGFFNGE-QDLKAAVDVAAEFR----AKLDDSVEIPKNDVVPGGEF 168
IY+ H GF++ D KA F +++DDSV + + + GE+
Sbjct: 111 THIYDPRHHQNQTGFYSDHSHDFKAMTGFQTAFSTNSGSEVDDSVSMSRTHLA--GEY 166