Miyakogusa Predicted Gene

Lj0g3v0006349.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0006349.1 tr|B9P5L7|B9P5L7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_590322 PE=4
SV=1,34.11,0.00000001, ,CUFF.380.1
         (119 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9P5L7_POPTR (tr|B9P5L7) Predicted protein OS=Populus trichocarp...    64   1e-08
B9RMT2_RICCO (tr|B9RMT2) Putative uncharacterized protein OS=Ric...    58   9e-07
E2FKH5_SOYBN (tr|E2FKH5) Sieve element occlusion e OS=Glycine ma...    58   1e-06

>B9P5L7_POPTR (tr|B9P5L7) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_590322 PE=4 SV=1
          Length = 316

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 62/129 (48%), Gaps = 28/129 (21%)

Query: 16  IRVESMWNSKFKRRK--------QWTMT------RDQGWAVASQGTTVQEGQHRAIEAHL 61
           +R+ESMW+SK + ++        Q  MT       DQGWAV S+G+   +   +A    +
Sbjct: 188 VRLESMWHSKVQHQRTADNDPIMQEIMTMLSFDGSDQGWAVISKGS---DEMAKAKGDTI 244

Query: 62  LCALMNMTSGRIRLEIKGFCKEWLIYKQELQTPYHCNRLILSGVNVVI-----------Q 110
           L + ++  S +   E+KGF      +  EL +P HCNRLIL G    I            
Sbjct: 245 LKSFVDFESWKQSAEVKGFLPALNDHLHELHSPSHCNRLILPGATGSIPERIVCAECGRP 304

Query: 111 MENFFMYRC 119
           ME F MYRC
Sbjct: 305 MEKFIMYRC 313


>B9RMT2_RICCO (tr|B9RMT2) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1083470 PE=4 SV=1
          Length = 701

 Score = 58.2 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 44/130 (33%), Positives = 58/130 (44%), Gaps = 26/130 (20%)

Query: 16  IRVESMWNSKFKRRK--------QWTMT------RDQGWAVASQGTTVQEGQ-HRAIEAH 60
           +R+ESMW+SK +  +        Q  +T       DQGWAV S+G+  +  Q  +A  + 
Sbjct: 569 VRLESMWHSKVQHNRTVENDIIMQEIVTMLSFDGSDQGWAVISKGSGAENRQLAKAKGSD 628

Query: 61  LLCALMNMTSGRIRLEIKGFCKEWLIYKQELQTPYHCNRLILSGVNVVI----------- 109
           +L    +  S R   E +GF    L Y      P HCNRLIL G    I           
Sbjct: 629 ILNCFDDYQSWREIAEEEGFVPAILDYLHGHHNPLHCNRLILPGTTGSIPEKVVCAECSR 688

Query: 110 QMENFFMYRC 119
            ME F MYRC
Sbjct: 689 PMEKFIMYRC 698


>E2FKH5_SOYBN (tr|E2FKH5) Sieve element occlusion e OS=Glycine max GN=SEOe PE=2
           SV=1
          Length = 703

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/130 (34%), Positives = 61/130 (46%), Gaps = 30/130 (23%)

Query: 16  IRVESMWNSKFKRRKQWTM--------------TRDQGWAVASQGT-TVQEGQHRAIEAH 60
           +R+ESMW+SK ++ K                  + D GWAV SQGT  + +G+    +  
Sbjct: 575 VRLESMWHSKSQQSKTVENDHIMHEVMRILTYDSGDPGWAVISQGTGKMAQGKG---DTF 631

Query: 61  LLCALMNMTSGRIRLEIKGFCKEWLIYKQELQTPYHCNRLILSGVNVVI----------- 109
           L C L      +   + KG       Y +ELQTP+HCNRLIL G +  I           
Sbjct: 632 LKC-LNEHEQWKDAAKDKGLLPAMDDYIKELQTPHHCNRLILPGTSGGIPDKVSCAECGQ 690

Query: 110 QMENFFMYRC 119
            ME F+MYRC
Sbjct: 691 TMEKFYMYRC 700