Miyakogusa Predicted Gene

Lj0g3v0004109.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0004109.1 Non Chatacterized Hit- tr|G7IG28|G7IG28_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,80.56,0.000000006, ,CUFF.252.1
         (87 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7IG28_MEDTR (tr|G7IG28) Putative uncharacterized protein OS=Med...    65   9e-09
G7IG29_MEDTR (tr|G7IG29) Pentatricopeptide repeat-containing pro...    64   3e-08
K7LBV9_SOYBN (tr|K7LBV9) Uncharacterized protein OS=Glycine max ...    61   1e-07

>G7IG28_MEDTR (tr|G7IG28) Putative uncharacterized protein OS=Medicago
          truncatula GN=MTR_2g036070 PE=4 SV=1
          Length = 381

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 29/36 (80%), Positives = 32/36 (88%)

Query: 52 TAGALKRDFEKVHFTCLPEIGEILVNGLTVKRKSHF 87
          TAG LKRDFE+VHFTCLP+IGEI V+GL VKRKS F
Sbjct: 29 TAGTLKRDFEQVHFTCLPDIGEIQVHGLMVKRKSCF 64


>G7IG29_MEDTR (tr|G7IG29) Pentatricopeptide repeat-containing protein OS=Medicago
            truncatula GN=MTR_2g036080 PE=4 SV=1
          Length = 1385

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/36 (80%), Positives = 31/36 (86%)

Query: 52   TAGALKRDFEKVHFTCLPEIGEILVNGLTVKRKSHF 87
            T GALKRDF KVHFTCLP+IGEI V+GL VKRKS F
Sbjct: 1232 TTGALKRDFVKVHFTCLPDIGEIQVHGLMVKRKSSF 1267


>K7LBV9_SOYBN (tr|K7LBV9) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 420

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/36 (75%), Positives = 30/36 (83%)

Query: 52 TAGALKRDFEKVHFTCLPEIGEILVNGLTVKRKSHF 87
          TA +LKRDFEK HF+CLP+IGEI V GL VKRKS F
Sbjct: 51 TAASLKRDFEKAHFSCLPDIGEIQVKGLMVKRKSCF 86