Miyakogusa Predicted Gene

Lj0g3v0000089.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0000089.2 tr|G7JDV1|G7JDV1_MEDTR RING finger protein
OS=Medicago truncatula GN=MTR_4g080750 PE=4
SV=1,68.75,0.00000000000008, ,CUFF.43.2
         (64 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7JDV1_MEDTR (tr|G7JDV1) RING finger protein OS=Medicago truncat...    81   1e-13
I1KEJ1_SOYBN (tr|I1KEJ1) Uncharacterized protein OS=Glycine max ...    80   3e-13
I1KEK8_SOYBN (tr|I1KEK8) Uncharacterized protein OS=Glycine max ...    76   4e-12
K7LUI4_SOYBN (tr|K7LUI4) Uncharacterized protein OS=Glycine max ...    68   1e-09

>G7JDV1_MEDTR (tr|G7JDV1) RING finger protein OS=Medicago truncatula
          GN=MTR_4g080750 PE=4 SV=1
          Length = 276

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 48/64 (75%), Gaps = 4/64 (6%)

Query: 1  MSNFTPLPGRWRRGVRAYDA--HTTNN-SESNEVPVFYRSH-STRVNDERSSGVSDPLQW 56
          M+NFTPLPG  R   RAY A  HT+NN  E NEVPVFYRSH S+R NDERSSG  DPLQ 
Sbjct: 5  MNNFTPLPGLRRTDSRAYGAPHHTSNNPHEFNEVPVFYRSHHSSRANDERSSGAQDPLQL 64

Query: 57 WEVR 60
          WE+R
Sbjct: 65 WEIR 68


>I1KEJ1_SOYBN (tr|I1KEJ1) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 262

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/62 (61%), Positives = 46/62 (74%)

Query: 1  MSNFTPLPGRWRRGVRAYDAHTTNNSESNEVPVFYRSHSTRVNDERSSGVSDPLQWWEVR 60
          M+NFTPLPG W+RG R++D HT N+ ESNEVPVFYRSHST   D RSSGV    ++ + R
Sbjct: 5  MNNFTPLPGSWQRGFRSFDDHTFNHRESNEVPVFYRSHSTHATDGRSSGVLARERFSDFR 64

Query: 61 TP 62
           P
Sbjct: 65 NP 66


>I1KEK8_SOYBN (tr|I1KEK8) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 262

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/62 (58%), Positives = 45/62 (72%)

Query: 1  MSNFTPLPGRWRRGVRAYDAHTTNNSESNEVPVFYRSHSTRVNDERSSGVSDPLQWWEVR 60
          ++NFTPLPG W+RG R++D HT N+ ESNEVPVFY SHST   D RSSGV    ++ + R
Sbjct: 5  INNFTPLPGSWQRGFRSFDDHTFNHRESNEVPVFYGSHSTHATDGRSSGVLARQRFSDFR 64

Query: 61 TP 62
           P
Sbjct: 65 NP 66


>K7LUI4_SOYBN (tr|K7LUI4) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 262

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 43/62 (69%)

Query: 1  MSNFTPLPGRWRRGVRAYDAHTTNNSESNEVPVFYRSHSTRVNDERSSGVSDPLQWWEVR 60
          M+NFT L G W+   R+ D HT N+ ESNEVPVFYRSHST V D+RSSGV    ++ + R
Sbjct: 5  MNNFTHLLGPWQTDFRSNDGHTFNHRESNEVPVFYRSHSTHVTDDRSSGVLARQRFSDFR 64

Query: 61 TP 62
           P
Sbjct: 65 NP 66