Miyakogusa Predicted Gene

Ljmitog3v0000190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Ljmitog3v0000190.1 Non Chatacterized Hit- tr|I1KZN7|I1KZN7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39997
PE,93.61,0,ATPASEA,ATPase, F0 complex, subunit A;
ATP_synth_a_bact,ATPase, F0 complex, subunit A; F1F0 ATP
synt,CUFF.17.1
         (329 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma0950s00200.1                                                     409   e-114
Glyma0859s00200.2                                                     373   e-103
Glyma16g24710.1                                                       149   3e-36
Glyma01g25260.1                                                       114   2e-25

>Glyma0950s00200.1 
          Length = 291

 Score =  409 bits (1050), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 211/266 (79%), Positives = 216/266 (81%), Gaps = 3/266 (1%)

Query: 58  LPLDSSASDSINSPLDQFEIIPLIDMKIGDLYFSFTNPXXXXXXXXXXXXXXXXXXXKNG 117
           L +   A+D+INSPLDQFEIIPLIDMKIGDLYFSFTNP                   KNG
Sbjct: 28  LTIAPCAADTINSPLDQFEIIPLIDMKIGDLYFSFTNPSLFMLLTLSLVLLLFHFVTKNG 87

Query: 118 GGKSVPNAWQSSVELIYDFVPNLVNEQIGGLSGNVKQKFFPCISVTFTFSLFCNPQGMIP 177
           GGK VPNAWQS VELIYDFVPNLVNEQI   +GNVKQ+FFPCISVTFTFSLFCNPQGMIP
Sbjct: 88  GGKLVPNAWQSLVELIYDFVPNLVNEQI---AGNVKQRFFPCISVTFTFSLFCNPQGMIP 144

Query: 178 YSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSFSXXXXXXXXXXXXXXXXXXXXH 237
           YSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSFS                    H
Sbjct: 145 YSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSFSLPAGVPLPLAPFLVLLELIPH 204

Query: 238 CFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNDLLYFIGDLGPLFIVLALTGPELG 297
           CFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNDL YFIGDLGPLFIVLALTGPELG
Sbjct: 205 CFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNDLFYFIGDLGPLFIVLALTGPELG 264

Query: 298 VAISQAHVSTISICIYLNDATNLHQT 323
           VAISQAHVSTISICIYLNDA NLHQT
Sbjct: 265 VAISQAHVSTISICIYLNDAINLHQT 290


>Glyma0859s00200.2 
          Length = 385

 Score =  373 bits (957), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 192/241 (79%), Positives = 195/241 (80%), Gaps = 3/241 (1%)

Query: 83  MKIGDLYFSFTNPXXXXXXXXXXXXXXXXXXXKNGGGKSVPNAWQSSVELIYDFVPNLVN 142
           +KIGDLYFSFTNP                   KNGGGK VPNAWQS VELIYDFVPNLVN
Sbjct: 147 VKIGDLYFSFTNPSLFMLLTLSLVLLLFHFVTKNGGGKLVPNAWQSLVELIYDFVPNLVN 206

Query: 143 EQIGGLSGNVKQKFFPCISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITI 202
           EQI   +GNVKQ+FFPCISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITI
Sbjct: 207 EQI---AGNVKQRFFPCISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITI 263

Query: 203 VGFQRNGLHFLSFSXXXXXXXXXXXXXXXXXXXXHCFRALSSGIRLFANMMAGHSSVKIL 262
           VGFQRNGLHFLSFS                    HCFRALSSGIRLFANMMAGHSSVKIL
Sbjct: 264 VGFQRNGLHFLSFSLPAGVPLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKIL 323

Query: 263 SGSAWTMLCMNDLLYFIGDLGPLFIVLALTGPELGVAISQAHVSTISICIYLNDATNLHQ 322
           SGSAWTMLCMNDL YFIGDLGPLFIVLALTGPELGVAISQAHVSTISICIYLNDA NLHQ
Sbjct: 324 SGSAWTMLCMNDLFYFIGDLGPLFIVLALTGPELGVAISQAHVSTISICIYLNDAINLHQ 383

Query: 323 T 323
           T
Sbjct: 384 T 384


>Glyma16g24710.1 
          Length = 138

 Score =  149 bits (377), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 72/78 (92%), Positives = 73/78 (93%)

Query: 246 IRLFANMMAGHSSVKILSGSAWTMLCMNDLLYFIGDLGPLFIVLALTGPELGVAISQAHV 305
           IRLFANMMAGHSS+KILSGSAWTMLCMNDL Y IGDLGPLFIVLALTG ELGVAISQAHV
Sbjct: 60  IRLFANMMAGHSSIKILSGSAWTMLCMNDLFYLIGDLGPLFIVLALTGSELGVAISQAHV 119

Query: 306 STISICIYLNDATNLHQT 323
           STISICIY NDA NLHQT
Sbjct: 120 STISICIYFNDAINLHQT 137


>Glyma01g25260.1 
          Length = 81

 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/84 (73%), Positives = 64/84 (76%), Gaps = 15/84 (17%)

Query: 115 KNGGGKSVPNAWQSSVELIYDFVPNLVNEQIGGLSGNVKQKFFPCISVTFTFSLFCNPQG 174
           KNGGGK VPNAWQS VE I+DFVPNLVNEQI     NVKQ+FFPCIS            G
Sbjct: 11  KNGGGKLVPNAWQSLVESIHDFVPNLVNEQI---VRNVKQRFFPCIS------------G 55

Query: 175 MIPYSFTVTSHFLITLGLSFSIFI 198
           MIPYSFTVTSHFLITLGLSFSIFI
Sbjct: 56  MIPYSFTVTSHFLITLGLSFSIFI 79