Miyakogusa Predicted Gene
- Lj6g3v2274630.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2274630.1 tr|G7LIM7|G7LIM7_MEDTR Pheophorbide a oxygenase
OS=Medicago truncatula GN=MTR_8g085840 PE=4 SV=1,81.95,0,no
description,Rieske [2Fe-2S] iron-sulphur domain; PHEOPHORBIDE A
OXYGENASE,NULL; IRON-SULFUR DOMAI,CUFF.61043.1
(271 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g12070.1 454 e-128
Glyma05g28900.1 444 e-125
Glyma20g05120.1 189 2e-48
Glyma12g08740.1 172 4e-43
Glyma12g08740.2 171 7e-43
Glyma11g19800.1 170 2e-42
Glyma04g06320.1 115 4e-26
Glyma06g06370.1 115 4e-26
Glyma04g42840.1 51 1e-06
Glyma06g11920.1 51 1e-06
Glyma14g23860.1 51 1e-06
Glyma13g03430.1 51 1e-06
Glyma14g23860.2 51 1e-06
>Glyma08g12070.1
Length = 531
Score = 454 bits (1167), Expect = e-128, Method: Compositional matrix adjust.
Identities = 217/267 (81%), Positives = 234/267 (87%), Gaps = 3/267 (1%)
Query: 1 MEAAVAFSVRSLHIPTPLESSTPLRKSMFLSTQLNPPLSLVHGITSKSKLFTALSPTQLT 60
MEA AFSV +LHIPT E+ RKS+FLS Q+ P+SLV SKSKLFTALSP LT
Sbjct: 1 MEAVYAFSVGTLHIPTAHETPNSFRKSIFLSNQVASPVSLVLRGASKSKLFTALSPPPLT 60
Query: 61 EESSSNNLPED-EPEVEANSEKFDWYSQWYPLMPICDLDKRAPHAKKVLGIDVVVWWDRN 119
E SSNN PE+ EPE E+++EKFDWYS WYPLMPICDLDKR PH K+VLGIDVVVWWDRN
Sbjct: 61 E--SSNNQPEEAEPEFESHAEKFDWYSHWYPLMPICDLDKRKPHGKRVLGIDVVVWWDRN 118
Query: 120 EGAWQVFDDACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPVHTF 179
EG WQV DDACPHRLAPLS+GRIDQWGRLQCVYHGWCFNG G+CK IPQAPP+GPPVHT
Sbjct: 119 EGVWQVHDDACPHRLAPLSDGRIDQWGRLQCVYHGWCFNGKGECKLIPQAPPDGPPVHTS 178
Query: 180 KKACVAAYPSTVQNDILWFWPNTDPQYKDIIERKRPPYIPELDDPSYTRLMGNRDITYGY 239
KKACVAAYPSTVQNDILWFWPNTDPQYKDII RKRPPYIPELDDPSYT+LMGNRDI+YGY
Sbjct: 179 KKACVAAYPSTVQNDILWFWPNTDPQYKDIITRKRPPYIPELDDPSYTKLMGNRDISYGY 238
Query: 240 EVLIENLMDPSHVPYAHYGLMRTQQPK 266
EVLIENLMDP+HVPYAHYGLMRT +PK
Sbjct: 239 EVLIENLMDPAHVPYAHYGLMRTPKPK 265
>Glyma05g28900.1
Length = 529
Score = 444 bits (1142), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/272 (78%), Positives = 234/272 (86%), Gaps = 4/272 (1%)
Query: 1 MEAAVAFSVRSLHIPTPLESSTPLRKSMFLSTQLNPPLSLVH-GITSKSKLFTALSPTQL 59
MEA AFSV +LHIPT E+S RKS+FLS Q+ P+SLV +SKSKL TALSP L
Sbjct: 1 MEAVCAFSVGTLHIPTAHETSNSFRKSIFLSNQVASPVSLVFLRGSSKSKLLTALSPPPL 60
Query: 60 TEESSSNNLPEDEPEVEANSEKFDWYSQWYPLMPICDLDKRAPHAKKVLGIDVVVWWDRN 119
TE S+N PE EPE E+++EKFDWYSQWYPLMPICDLDKR PH K+VLGIDVVVWWDRN
Sbjct: 61 TE---SSNQPEAEPEFESHAEKFDWYSQWYPLMPICDLDKRKPHGKRVLGIDVVVWWDRN 117
Query: 120 EGAWQVFDDACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPVHTF 179
EGAWQV DDACPHRLAPLS+GRIDQWGRLQCVYHGWCFNG G+C+ IPQA P+GPPVHT
Sbjct: 118 EGAWQVHDDACPHRLAPLSDGRIDQWGRLQCVYHGWCFNGKGECQLIPQALPDGPPVHTS 177
Query: 180 KKACVAAYPSTVQNDILWFWPNTDPQYKDIIERKRPPYIPELDDPSYTRLMGNRDITYGY 239
KKACVAAYPSTVQNDILWFWPNTDPQYKDII RKRPP+IPE+DDPSYT+ MGNRDI YGY
Sbjct: 178 KKACVAAYPSTVQNDILWFWPNTDPQYKDIITRKRPPFIPEIDDPSYTKSMGNRDIPYGY 237
Query: 240 EVLIENLMDPSHVPYAHYGLMRTQQPKGRHIR 271
EVLIENLMDP+HVPYAHYGLMRT QPK + R
Sbjct: 238 EVLIENLMDPAHVPYAHYGLMRTPQPKVKADR 269
>Glyma20g05120.1
Length = 203
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/150 (65%), Positives = 104/150 (69%), Gaps = 32/150 (21%)
Query: 116 WDRNEGAWQVFDDACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPP 175
WD N G W+V DDAC HRLAPLS GRIDQWGR FI
Sbjct: 1 WDGNVGVWKVHDDACSHRLAPLSNGRIDQWGR-----------------FI--------- 34
Query: 176 VHTFKKACVAAYPSTVQNDILWFWPNTDPQYKDIIERKRPPYIPELDDPSYTRLMGNRDI 235
ACVAAYPSTVQNDILWF PNTDPQYKDII RKRPP+IPE DDPS T+LMGNRDI
Sbjct: 35 ------ACVAAYPSTVQNDILWFLPNTDPQYKDIITRKRPPFIPETDDPSSTKLMGNRDI 88
Query: 236 TYGYEVLIENLMDPSHVPYAHYGLMRTQQP 265
YGYE+ IENLMDP+HVPYAHYGLM T +P
Sbjct: 89 PYGYELPIENLMDPTHVPYAHYGLMGTLKP 118
>Glyma12g08740.1
Length = 563
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 116/187 (62%), Gaps = 5/187 (2%)
Query: 76 EANSEKFDWYSQWYPLMPICDLDKRAPHAKKVLGIDVVVWWDRNEGAWQVFDDACPHRLA 135
E++ KF W WYP+ I DL+ P ++LG ++V+W+D++ W FDD CPHRLA
Sbjct: 105 ESSYSKFTWRDHWYPVSLIEDLNPLLPTPFQLLGREIVLWYDKSISQWVAFDDKCPHRLA 164
Query: 136 PLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPVHTFK--KACVAAYPSTVQN 193
PLSEGRID+ G+LQC YHGW F+G G C IPQA EGP KAC +P+ V
Sbjct: 165 PLSEGRIDEDGKLQCSYHGWSFDGCGSCVKIPQAASEGPEARAIGSPKACATRFPTMVSQ 224
Query: 194 DILWFWPNTDPQYKDIIERKRPPYIP-ELDDPSYTRLMGNRDITYGYEVLIENLMDPSHV 252
+L+ WP+ + K + +PP +P + D P + + RD+ YGY+ L+EN+ DPSH+
Sbjct: 225 GLLFVWPDENGWEK--AKASKPPMLPDDFDKPEFATVNIQRDLFYGYDTLMENVSDPSHI 282
Query: 253 PYAHYGL 259
+AH+ +
Sbjct: 283 EFAHHKV 289
>Glyma12g08740.2
Length = 481
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 138/249 (55%), Gaps = 26/249 (10%)
Query: 25 RKSMFLSTQLNPPLSLVHGITSKSKLFTALSPTQLTEESSSNNLPEDEPEV--------- 75
+K+ FL+ Q P +S+ +L+P ++ S+ + PE
Sbjct: 53 QKTRFLTKQTRP----------RSRRSLSLTPARVAAPPSTVEADQSYPETENNETEEEF 102
Query: 76 --EANSEKFDWYSQWYPLMPICDLDKRAPHAKKVLGIDVVVWWDRNEGAWQVFDDACPHR 133
E++ KF W WYP+ I DL+ P ++LG ++V+W+D++ W FDD CPHR
Sbjct: 103 NDESSYSKFTWRDHWYPVSLIEDLNPLLPTPFQLLGREIVLWYDKSISQWVAFDDKCPHR 162
Query: 134 LAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPVHTFK--KACVAAYPSTV 191
LAPLSEGRID+ G+LQC YHGW F+G G C IPQA EGP KAC +P+ V
Sbjct: 163 LAPLSEGRIDEDGKLQCSYHGWSFDGCGSCVKIPQAASEGPEARAIGSPKACATRFPTMV 222
Query: 192 QNDILWFWPNTDPQYKDIIERKRPPYIP-ELDDPSYTRLMGNRDITYGYEVLIENLMDPS 250
+L+ WP+ + K + +PP +P + D P + + RD+ YGY+ L+EN+ DPS
Sbjct: 223 SQGLLFVWPDENGWEK--AKASKPPMLPDDFDKPEFATVNIQRDLFYGYDTLMENVSDPS 280
Query: 251 HVPYAHYGL 259
H+ +AH+ +
Sbjct: 281 HIEFAHHKV 289
>Glyma11g19800.1
Length = 545
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 113/182 (62%), Gaps = 5/182 (2%)
Query: 81 KFDWYSQWYPLMPICDLDKRAPHAKKVLGIDVVVWWDRNEGAWQVFDDACPHRLAPLSEG 140
KF W WYP+ I DL+ P ++LG ++V+W+D++ W FDD CPHRLAPLSEG
Sbjct: 92 KFTWRDHWYPVSLIEDLNPLLPTPFQLLGREIVLWYDKSISQWVAFDDKCPHRLAPLSEG 151
Query: 141 RIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPVHTFK--KACVAAYPSTVQNDILWF 198
RID+ G+LQC YHGW F+G G C IPQA EGP KAC +P+ V +L+
Sbjct: 152 RIDEDGKLQCSYHGWSFDGCGSCVKIPQASSEGPEARAIGSPKACATRFPTLVSQGLLFV 211
Query: 199 WPNTDPQYKDIIERKRPPYIP-ELDDPSYTRLMGNRDITYGYEVLIENLMDPSHVPYAHY 257
WP+ + K + +PP +P + D P + + RD+ YGY+ L+EN+ DPSH+ +AH+
Sbjct: 212 WPDENGWEK--AKASKPPMLPDDFDKPEFATVNIQRDLFYGYDTLMENVSDPSHIEFAHH 269
Query: 258 GL 259
+
Sbjct: 270 KV 271
>Glyma04g06320.1
Length = 532
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 13/183 (7%)
Query: 76 EANSEKFDWYSQWYPLMPICDLDKRAPHAKKVLGIDVVVWWDRNEGAWQVFDDACPHRLA 135
E +DW +WYPL ++ + AP +V +V++ D N G ++ ++D CPHRLA
Sbjct: 70 EERKGDYDWTQEWYPLYLTQNVPEDAPLGLRVFDKQLVLFKDGN-GQFRCYEDRCPHRLA 128
Query: 136 PLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPVHTFKKACVAAYPSTVQNDI 195
LSEG++ GRL+C+YHGW F G G C IPQ P + + ACV Y +
Sbjct: 129 KLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRAACVKTYEVRDSQGV 184
Query: 196 LWFWPN--TDPQYKDIIERKRPPYIPELDDPSYTRLMGNRDITYGYEVLIENLMDPSHVP 253
+W W + T P + P+ P + + ++ Y + +L+ENLMDP+H+P
Sbjct: 185 IWVWMSLKTPPNVSKL------PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIP 238
Query: 254 YAH 256
+H
Sbjct: 239 ISH 241
>Glyma06g06370.1
Length = 540
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 100/190 (52%), Gaps = 16/190 (8%)
Query: 69 PEDEPEVEANSEKFDWYSQWYPLMPICDLDKRAPHAKKVLGIDVVVWWDRNEGAWQVFDD 128
P E E + + +DW +WYPL ++ + AP +V +V++ D N G ++ ++D
Sbjct: 74 PASEDERKGD---YDWTQEWYPLYLTLNVPEDAPLGLRVFDKQLVLFKDGN-GQFRCYED 129
Query: 129 ACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPVHTFKKACVAAYP 188
CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ P + + ACV Y
Sbjct: 130 RCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPQAACVKTYE 185
Query: 189 STVQNDILWFWPN--TDPQYKDIIERKRPPYIPELDDPSYTRLMGNRDITYGYEVLIENL 246
++W W + T P + P+ P + + ++ Y + +L+ENL
Sbjct: 186 VRDSQGVIWVWMSLKTPPNVSKL------PWFENFARPEFQDISTIHELPYDHSILLENL 239
Query: 247 MDPSHVPYAH 256
MDP+H+P +H
Sbjct: 240 MDPAHIPISH 249
>Glyma04g42840.1
Length = 530
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 128 DACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPVHTFKKACVAAY 187
+ C HR PL G +++ GR+QC YHGW + G C+ +P + +
Sbjct: 254 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYTTDGKCEKMPST--------RLLNVKIKSL 304
Query: 188 PSTVQNDILWFWPNTDP 204
P ++W WP DP
Sbjct: 305 PCFETEGMIWVWPGNDP 321
>Glyma06g11920.1
Length = 530
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
Query: 114 VWWDRNEGAWQVFDDACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEG 173
V + +G + C HR PL G + + GR+QC YHGW + G C+ +P
Sbjct: 240 VIFRGKDGKPGCVQNTCAHRACPLHLGSVKE-GRIQCPYHGWEYTTDGKCEKMPST---- 294
Query: 174 PPVHTFKKACVAAYPSTVQNDILWFWPNTDP 204
+ + P + ++W WP DP
Sbjct: 295 ----RLLNVKIKSLPCFEKEGMIWVWPGNDP 321
>Glyma14g23860.1
Length = 534
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 128 DACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPVHTFKKACVAAY 187
+ C HR PL G +++ GR+QC YHGW + G C+ +P + +
Sbjct: 252 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYTTDGKCEKMPSTQQ--------LNVKIKSV 302
Query: 188 PSTVQNDILWFWPNTDP 204
P + ++W WP DP
Sbjct: 303 PCFEREGMIWIWPGNDP 319
>Glyma13g03430.1
Length = 532
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 128 DACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPVHTFKKACVAAY 187
+ C HR PL G +++ GR+QC YHGW + G C+ +P + +
Sbjct: 252 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYTTDGKCEKMPSTRQ--------LNVKIKSV 302
Query: 188 PSTVQNDILWFWPNTDP 204
P + ++W WP DP
Sbjct: 303 PCFEKEGMIWIWPGNDP 319
>Glyma14g23860.2
Length = 393
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 128 DACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPVHTFKKACVAAY 187
+ C HR PL G +++ GR+QC YHGW + G C+ +P + +
Sbjct: 252 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYTTDGKCEKMPSTQQ--------LNVKIKSV 302
Query: 188 PSTVQNDILWFWPNTDP 204
P + ++W WP DP
Sbjct: 303 PCFEREGMIWIWPGNDP 319