Miyakogusa Predicted Gene
- Lj6g3v2274500.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2274500.1 Non Chatacterized Hit- tr|C5XRC0|C5XRC0_SORBI
Putative uncharacterized protein Sb03g041420
OS=Sorghu,37.1,0.000000002,seg,NULL; coiled-coil,NULL,CUFF.60982.1
(304 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g29180.1 451 e-127
Glyma08g20040.1 422 e-118
Glyma08g13390.1 407 e-114
Glyma06g11290.1 311 7e-85
Glyma13g02370.1 275 6e-74
Glyma14g33790.1 258 7e-69
Glyma01g05280.1 130 1e-30
Glyma04g43370.1 96 5e-20
Glyma05g30220.1 92 6e-19
Glyma15g35090.1 60 4e-09
Glyma09g10000.1 49 6e-06
>Glyma12g29180.1
Length = 312
Score = 451 bits (1160), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/301 (77%), Positives = 247/301 (82%), Gaps = 6/301 (1%)
Query: 7 TNSSINGFYNFLTQGLNDLHQSFLSHNFMSIQFLSQVISSLQSFHSQLTILVCKLRLPVG 66
TN+S++GFYNFLTQGLN+LHQSFLSH+FMS QFLSQVISSLQSFHSQLTILV KLRLPVG
Sbjct: 3 TNTSVSGFYNFLTQGLNELHQSFLSHSFMSFQFLSQVISSLQSFHSQLTILVRKLRLPVG 62
Query: 67 GKWLDEYMDESSRLWDACHVLKSAISGIEXXXXXXXXXXXXLDGYHHFTPELSRQVIRAI 126
GKWLDEYMDESSRLWDACHVLKSAISG+E LDGYHHFTPELSRQVIRAI
Sbjct: 63 GKWLDEYMDESSRLWDACHVLKSAISGMENYYSAASNIASSLDGYHHFTPELSRQVIRAI 122
Query: 127 NVCQREILGLEEENKSLVETRIQPLSQCLYQNISVMESKLNGFSGFRGVLHAMRSVGSXX 186
NVCQR+ILGLEEENKSL+ETRI+PLSQCL QNIS MESKLNGFSGFRGVL+AMRSV S
Sbjct: 123 NVCQRDILGLEEENKSLMETRIEPLSQCLIQNIS-MESKLNGFSGFRGVLYAMRSVSSLL 181
Query: 187 XXXXXXXXAYCWSSSCFHQ---GDMVFGSGFMVSMAMLQQKVTXXXXXXXXXXXXLLFEF 243
AYCWSS CFHQ G MVFGS FMVSMA+LQQKV LLFEF
Sbjct: 182 LMILLNGLAYCWSSCCFHQGYDGHMVFGSDFMVSMAILQQKVAEEIDQIEGQPGILLFEF 241
Query: 244 QQAKIAMEELKVELERMAGYEAHGDDIQEKVENVKSCFGLLRCGVETITGQLDDFFDEIV 303
QQAK AMEELKVELER+A +IQEKV+NVKSCFGLLRCGV+TITGQLDDFFDEIV
Sbjct: 242 QQAKSAMEELKVELERIASLSYA--EIQEKVDNVKSCFGLLRCGVDTITGQLDDFFDEIV 299
Query: 304 E 304
E
Sbjct: 300 E 300
>Glyma08g20040.1
Length = 322
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/309 (74%), Positives = 248/309 (80%), Gaps = 12/309 (3%)
Query: 7 TNSSINGFYNFLTQGLNDLHQSFLSHN-FMSIQFLSQVISSLQSFHSQLTILVCKLRLPV 65
+NSS++GFYN LTQGLN+LHQSFLSH+ FMS QFLSQVISSLQSFHSQLTILV KL LPV
Sbjct: 3 SNSSVSGFYNLLTQGLNELHQSFLSHSSFMSFQFLSQVISSLQSFHSQLTILVRKLWLPV 62
Query: 66 GGKWLDEYMDESSRLWDACHVLKSAISGIEXXXXXXXXXXXXLDGYHHFTPELSRQVIRA 125
GGKWLDEYMDESSRLWDACHVLKSAISG+E LD YH+FTP+LSRQVIRA
Sbjct: 63 GGKWLDEYMDESSRLWDACHVLKSAISGMENYYLAASNIASSLDAYHYFTPQLSRQVIRA 122
Query: 126 INVCQREILGLEEENKSLVETRIQPLSQCLYQNISVMESKLNGFSGFRGVLHAMRSVGSX 185
INVCQREILGLEEEN+SL+ETRI+PLSQCL QNIS MESKLNGFSGFRGVL+AMRSV S
Sbjct: 123 INVCQREILGLEEENRSLMETRIEPLSQCLIQNIS-MESKLNGFSGFRGVLYAMRSVSSL 181
Query: 186 XXXXXXXXXAYCWSSSCFHQ---GDMVFGS-GFMVSMAMLQQKVTXXXXXXXX--XXXXL 239
AYCWSSSCFHQ G MVFGS GFMVSMA+LQQKV L
Sbjct: 182 LLMILLSGLAYCWSSSCFHQGYDGHMVFGSTGFMVSMAILQQKVAEEIDQNIEGGQPGIL 241
Query: 240 LFEFQQAKIAMEELKVELERMA---GYEAHGD-DIQEKVENVKSCFGLLRCGVETITGQL 295
LFEFQ+AK AMEELK+ELER+A E H D +IQEK+ NVKSCFGLLRCGVETITGQL
Sbjct: 242 LFEFQKAKNAMEELKLELERIAISCYEEGHADHEIQEKIHNVKSCFGLLRCGVETITGQL 301
Query: 296 DDFFDEIVE 304
DDFFDEIVE
Sbjct: 302 DDFFDEIVE 310
>Glyma08g13390.1
Length = 318
Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/298 (71%), Positives = 232/298 (77%), Gaps = 6/298 (2%)
Query: 11 INGFYNFLTQGLNDLHQSFLSHNFMSIQFLSQVISSLQSFHSQLTILVCKLRLPVGGKWL 70
+NGFYNFLTQGLN+LHQSFLSH+FMSIQF+S+V SSLQSFHSQLTILV +L L VGGKWL
Sbjct: 11 VNGFYNFLTQGLNELHQSFLSHDFMSIQFISEVFSSLQSFHSQLTILVQRLCLSVGGKWL 70
Query: 71 DEYMDESSRLWDACHVLKSAISGIEXXXXXXXXXXXXLDGYHHFTPELSRQVIRAINVCQ 130
+EYMDESSRLWD CHVLKSAISGIE +DGYH+ TPELS QVIRAIN+CQ
Sbjct: 71 NEYMDESSRLWDICHVLKSAISGIENYSSTGSNIASSVDGYHNLTPELSHQVIRAINICQ 130
Query: 131 REILGLEEENKSLVETRIQPLSQCLYQNISVMESKLNGFSGFRGVLHAMRSVGSXXXXXX 190
RE LGL EENKSL+ETR Q LSQCL QN+ MESKLN F+GFRGVL AMRSV S
Sbjct: 131 RESLGLVEENKSLMETRTQALSQCLNQNM-CMESKLNEFNGFRGVLCAMRSVSSLLLMIL 189
Query: 191 XXXXAYCWSSSCFHQ----GDMVFGSGFMVSMAMLQQKVTXXXXXXXXXXXXLLFEFQQA 246
AYCWSSSCF Q G MVFGSGF+VSMA LQQKV LL EFQQA
Sbjct: 190 LCGVAYCWSSSCFDQQGYEGHMVFGSGFVVSMARLQQKVAQEIDQNNGQQGILLLEFQQA 249
Query: 247 KIAMEELKVELERMAGYEAHGDDIQEKVENVKSCFGLLRCGVETITGQLDDFFDEIVE 304
KI+MEELKVELERM GY+A +IQ KV+N+K CFGLLRCGVETITGQLDDFFDEIVE
Sbjct: 250 KISMEELKVELERMVGYDAQ-HEIQAKVDNLKRCFGLLRCGVETITGQLDDFFDEIVE 306
>Glyma06g11290.1
Length = 321
Score = 311 bits (796), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 165/307 (53%), Positives = 209/307 (68%), Gaps = 12/307 (3%)
Query: 9 SSINGFYNFLTQGLNDLHQSFLSHNFMSIQFLSQVISSLQSFHSQLTILVCKLRLPVGGK 68
SS+NGFY+FLT+G++DL FLS NFMSIQFL + +S L+SFH+QLT+LV KL LPVG K
Sbjct: 4 SSVNGFYSFLTRGIDDLESVFLSTNFMSIQFLQRALSLLRSFHTQLTLLVQKLHLPVGDK 63
Query: 69 WLDEYMDESSRLWDACHVLKSAISGIEXXXXXXXXXXXXLDGYHHFTPELSRQVIRAINV 128
WLDEYMDESS+LWDACHV+KS IS I+ LD + TP+LSRQVIRAI
Sbjct: 64 WLDEYMDESSKLWDACHVIKSGISSIDTYYSAALNITSSLDSHRPITPQLSRQVIRAIAG 123
Query: 129 CQREILGLEEENKSLVETRIQPLSQCLYQNISVMESKLNGFSGFRGVLHAMRSVGSXXXX 188
C+RE +GLEEEN+ L+E RIQPLS + +S+ ESKLNGF+GFRGVL+AMR+V S
Sbjct: 124 CRREAVGLEEENRGLMEARIQPLSLRFEERVSI-ESKLNGFNGFRGVLYAMRNVSSLLLM 182
Query: 189 XXXXXXAYCWSSS-------CFHQGDMVFGSGFMVSMAMLQQKVTXXXXXXXXXXXXLLF 241
YC+ S C ++G + GS FM+S A LQQ+V LL
Sbjct: 183 VLLYGLVYCYGDSSDFVLGGCGYEGCLFLGSAFMMSTARLQQRVAAEIGHMGGAQGMLLH 242
Query: 242 EFQQAKIAMEELKVELER---MAGYEAHGD-DIQEKVENVKSCFGLLRCGVETITGQLDD 297
EF+++K+AMEEL+ ELER G E + I+E+VEN+++CFG+LR G + I QLDD
Sbjct: 243 EFRRSKVAMEELRGELERRGSQGGVEWESEVAIRERVENLRACFGVLRSGADNIVAQLDD 302
Query: 298 FFDEIVE 304
FFDEIVE
Sbjct: 303 FFDEIVE 309
>Glyma13g02370.1
Length = 313
Score = 275 bits (702), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 152/308 (49%), Positives = 206/308 (66%), Gaps = 19/308 (6%)
Query: 4 SSCTNSSINGFYNFLTQGLNDLHQSFLSHN-FMSIQFLSQVISSLQSFHSQLTILVCKLR 62
SS TN+ +NGFY F+++G+ +L ++FL++N F+S+QFL +V+S L+S H+QLT+LV KL+
Sbjct: 6 SSNTNT-VNGFYTFVSRGMEELERAFLANNNFISVQFLQKVVSLLRSLHTQLTLLVHKLQ 64
Query: 63 LPVGGKWLDEYMDESSRLWDACHVLKSAISGIEXXXXXXXXXXXXLDGYHHFTPELSRQV 122
LP+G KWLDEYMDE+S+LW+ H+LKSAIS E LD H P LS Q+
Sbjct: 65 LPLGDKWLDEYMDETSKLWETSHLLKSAISNFEPFYSQGFNLLSSLDSSH---PHLSPQI 121
Query: 123 IRAINVCQREILGLEEENKSLVETRIQPLSQCLYQNISVMESKLNGFSGFRGVLHAMRSV 182
+RAI+ C+RE LGLEE+N++L+ETRI L L + +SV ESKLNGF+GFRGVL+AMR+V
Sbjct: 122 VRAISGCRREALGLEEQNRALMETRIHTLCLRLDERVSV-ESKLNGFNGFRGVLYAMRNV 180
Query: 183 GSXXXXXXXXXXAYCWSSSC------FHQGDMVFGSGFMVSMAMLQQKVTXXXXXXXXXX 236
S YCW + + G M GS MVS A L+Q+V
Sbjct: 181 SSMLLMILLHGLVYCWPETSELVAGGYEGGRMFLGSAVMVSAARLRQRVA-VEMRGAAGP 239
Query: 237 XXLLFEFQQAKIAMEELKVELERMAGYEAHGDDIQEKVENVKSCFGLLRCGVETITGQLD 296
LL+EF++A++A+EEL+ ELE EA G ++E+VE+V+ CFG+LR G E I QLD
Sbjct: 240 GILLYEFRRARVAVEELRGELE-----EAEG-GVRERVESVRVCFGVLRSGAENIVCQLD 293
Query: 297 DFFDEIVE 304
DFFDEIVE
Sbjct: 294 DFFDEIVE 301
>Glyma14g33790.1
Length = 304
Score = 258 bits (658), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 147/303 (48%), Positives = 200/303 (66%), Gaps = 18/303 (5%)
Query: 4 SSCTNSSINGFYNFLTQGLNDLHQSFLSHN-FMSIQFLSQVISSLQSFHSQLTILVCKLR 62
SS TN+ +NGFY F+++G+ +L ++FL++N F+S+QFL +V+S L+S H+QLT+LV KL
Sbjct: 6 SSNTNT-VNGFYTFVSRGMEELERAFLANNSFISLQFLQKVLSLLRSLHTQLTLLVHKLH 64
Query: 63 LPVGGKWLDEYMDESSRLWDACHVLKSAISGIEXXXXXXXXXXXXLDGYHHFTPELSRQV 122
LP+G KWLDEYMDE+S+LW+ H+LKSAIS E LD H QV
Sbjct: 65 LPLGDKWLDEYMDETSKLWETSHLLKSAISNFEPFYSQGFNLLSSLDSSHP-------QV 117
Query: 123 IRAINVCQREILGLEEENKSLVETRIQPLSQCLYQNISVMESKLNGFSGFRGVLHAMRSV 182
+RAI+ C+RE LGLEE+N++L+ETR+ L L + +SV ESKLNGF+GFRGVL+AMR+V
Sbjct: 118 VRAISGCRREALGLEEQNRALMETRVHTLCLRLDERVSV-ESKLNGFNGFRGVLYAMRNV 176
Query: 183 GSXXXXXXXXXXAYCWS-SSCFHQGDMVFGSGFMVSMAMLQQKVTXXXXXXXXXXXXLLF 241
S YCW +S G G F+ S A L+Q+V LL+
Sbjct: 177 SSMLLMILLHGLVYCWPETSELVSGGYEGGRMFLGSAARLRQRVA-AEMRGAAGPGILLY 235
Query: 242 EFQQAKIAMEELKVELERMAGYEAHGDDIQEKVENVKSCFGLLRCGVETITGQLDDFFDE 301
EF++A++A+EEL+ ELE EA G ++E+VE+V+ CFG+LR G E I QLDDFFDE
Sbjct: 236 EFRRARVAVEELRGELE-----EAEG-GVRERVESVRVCFGVLRSGAENIVCQLDDFFDE 289
Query: 302 IVE 304
IVE
Sbjct: 290 IVE 292
>Glyma01g05280.1
Length = 258
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 119/224 (53%), Gaps = 18/224 (8%)
Query: 84 CHVLKSAISGIEXXXXXXXXXXXXLDGYHHFTPELSRQVIRAINVCQREILGLE-EENKS 142
CHVLKSAI GIE +DGYH+ TPELS Q + C I+G + + S
Sbjct: 38 CHVLKSAIYGIENYSSTGSNIASSIDGYHNLTPELSHQ-----HTC---IVGYKGHKYLS 89
Query: 143 LVETRIQPLSQCLYQNISVMESKLNGFSGFRGVLHAMRSVGSXXXXXXXXXXAYCWSSSC 202
E+RI Q L N + ++ G+ ++ V Y +S+
Sbjct: 90 KGESRIGRGKQKLDGNKNACIETMSKPKHVYGI--KVKQVQWLLRCSLCNEECYLIASND 147
Query: 203 FHQGDMVFGSGFMVSMAMLQ--QKVTXXXXXXXXXXXXLLFEFQQAKIAMEELKVELERM 260
F ++G +V + + QKV LL EFQQAKIAMEELKVELERM
Sbjct: 148 F----AIWGCILLVFLMLWPTTQKVAQEIGQNNGQRGILLLEFQQAKIAMEELKVELERM 203
Query: 261 AGYEAHGDDIQEKVENVKSCFGLLRCGVETITGQLDDFFDEIVE 304
GY+A +IQ KV+N+K CFGLLRCGVETIT QLDDFFDEIVE
Sbjct: 204 VGYDAQ-YEIQAKVDNLKHCFGLLRCGVETITRQLDDFFDEIVE 246
>Glyma04g43370.1
Length = 141
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 12/121 (9%)
Query: 196 YCWSSS-------CFHQGDMVFGSGFMVSMAMLQQKVTXXXXXXXXXXXXLLFEFQQAKI 248
YC+ S C ++G + GS FM+S A LQQ+V LL EF+++K+
Sbjct: 9 YCYGDSSDFVLGGCGYEGCLFLGSAFMMSTARLQQRVAAEIGHMGGSPGMLLHEFRRSKV 68
Query: 249 AMEELKVELERMA----GYEAHGD-DIQEKVENVKSCFGLLRCGVETITGQLDDFFDEIV 303
AMEEL+ ELER G E + I+E+VEN+++CFG+LR G + I QLDDFFDEIV
Sbjct: 69 AMEELRGELERRGSGSQGVEWESEVAIRERVENLRTCFGVLRSGADNIVAQLDDFFDEIV 128
Query: 304 E 304
E
Sbjct: 129 E 129
>Glyma05g30220.1
Length = 137
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 76/137 (55%), Gaps = 22/137 (16%)
Query: 14 FYNFLTQGLNDLHQSFLSHNFMSIQFLSQVISSLQSFHSQLTILVCKLRLPVGGKWLDEY 73
FYNFLTQGLN+LHQSFLSH+FMSIQF+S V SSLQSFHSQLTILV +L L +
Sbjct: 14 FYNFLTQGLNELHQSFLSHDFMSIQFISDVFSSLQSFHSQLTILVQRLCLSLKALGYLPC 73
Query: 74 MDESSRLWDACHVLKSAISGIEXXXXXXXXXXXXLDGYHHFTPELSRQVIRAINVCQ-RE 132
M + +SAISG+E +D YHH T ++CQ
Sbjct: 74 MYSN----------RSAISGMENYSSTGSNIASSVDDYHHLT-----------HICQILS 112
Query: 133 ILGLEEENKSLVETRIQ 149
+ GL + + L T ++
Sbjct: 113 LSGLRKLTRHLFHTFLK 129
>Glyma15g35090.1
Length = 48
Score = 59.7 bits (143), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 60 KLRLPVGGKWLDEYMDESSRLWDACHVLKSAISGI 94
KL LPVG KWL+EYMDESS+LWD C V+K I GI
Sbjct: 1 KLHLPVGDKWLNEYMDESSKLWDVCQVIKFGIFGI 35
>Glyma09g10000.1
Length = 46
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 32 HNFMSIQFLSQVISSLQSFHSQLTILVCKLRLPVGGKWLD 71
H MSIQFL + + L+SFH+QLT LV KL L VG KWL+
Sbjct: 6 HKLMSIQFLQRTLFLLRSFHTQLTFLVQKLHLLVGEKWLN 45