Miyakogusa Predicted Gene
- Lj6g3v2257830.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2257830.1 tr|B9HV48|B9HV48_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_566242 PE=4
SV=1,27.75,0.000000003,seg,NULL; XS,XS domain; TRANSCRIPTION FACTOR
X1-LIKE,NULL; RIBONUCLEASE P PROTEIN SUBUNIT P38-RELATE,CUFF.60995.1
(475 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g19690.1 441 e-124
Glyma15g05380.1 394 e-109
Glyma04g38100.1 328 1e-89
Glyma05g33260.1 319 4e-87
Glyma06g16960.1 305 5e-83
Glyma19g09970.1 238 8e-63
Glyma08g00860.1 89 2e-17
Glyma02g29300.1 70 4e-12
Glyma20g28430.2 59 1e-08
Glyma20g28430.1 57 3e-08
Glyma10g39340.1 57 4e-08
>Glyma08g19690.1
Length = 611
Score = 441 bits (1135), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/527 (47%), Positives = 309/527 (58%), Gaps = 100/527 (18%)
Query: 1 MAEGGADPFPKLGSVYRGSGGANSK------SNQWRRNAGTGSSKQIAVKTGGGDSRGSS 54
MA+ GADPFPKL SVYR SG N+K ++Q ++ +S+Q+ + G SR
Sbjct: 1 MADDGADPFPKLTSVYRVSGSKNNKLSWNVANSQQSVDSSVNNSRQLQSISDGSASRSWF 60
Query: 55 SQLQNMPQKPNAWGQSNLIQKLNKEGPGGSGL---------------------GTLKDSN 93
SQ +PNAW ++IQKL G GL G L DS
Sbjct: 61 SQ----NSRPNAWEVPSVIQKLRLGKRGNDGLTNNSNLQDKSNSPDALALTGSGILNDSK 116
Query: 94 LPP-------------------------TLKKGSDSSDGVPEPDYETIDGGTGXXXXXXX 128
LPP LK + +PEP E D G+
Sbjct: 117 LPPESAISPTSETCLNSSVDVVDTTTSKDLKNVECKDERIPEPHCE--DNGSDIVFDSDD 174
Query: 129 XXXXXXXXXXXXXXXXXGVKGHEGAKKNKWCRDFFGRLDKVASQVEKLDSPSIRWHCPIC 188
G + HE KK+KW R+FF +L+ + + E++ S +WHCP C
Sbjct: 175 DCFLDNIDLDT------GERSHEQCKKSKWLRNFFDKLNALTN--EEISSLDRQWHCPAC 226
Query: 189 RGGPGAIDWYHGLQPLYVHAMTIQVRFAIVHRLFADTLKEECRRRGAPLTS--EASGLWE 246
+GG GAIDWY GLQPL H+ TIQ A +HR+FA+TL+EEC RR APLT+ E +WE
Sbjct: 227 QGGSGAIDWYKGLQPLLDHSRTIQTTRARLHRMFAETLEEECFRRRAPLTTVGEVHNIWE 286
Query: 247 GLDKKLKDHEIVWPPMVIIMNTKSQRGENNKVQQYSCLVFIRVFVFCYFALCFSYAKFFE 306
GLDKK+KDHEIVWPPMVIIMNT+ ++ E+NK
Sbjct: 287 GLDKKVKDHEIVWPPMVIIMNTRYEQDESNK----------------------------- 317
Query: 307 LQWTGMGNQELLDSFSDYAAMKARHSYGPQGHRGMSVLIFAETPAGYLEAMRLHKHFKEQ 366
W GMGNQEL+D FSDYAA+KARHSYGPQGHRGMS LIF ET AGYLEA+RLHKHFKEQ
Sbjct: 318 --WNGMGNQELVDCFSDYAALKARHSYGPQGHRGMSALIFEETTAGYLEAVRLHKHFKEQ 375
Query: 367 GRDKEAWGRCRNPYVPGGRRQLYGYLASGEDLENFNQHS-GKTKLKYELKSYQETVESKI 425
GRD+EAW C+NP++PGG+RQLYGYLAS EDL+ FN+HS GKTKLK+E++SYQE VE KI
Sbjct: 376 GRDREAWDCCQNPFLPGGKRQLYGYLASKEDLDIFNKHSGGKTKLKFEMRSYQEMVERKI 435
Query: 426 KHINDDIQQLDYFKDKAAKEQFKSEVYANTLSKVTDKLRQAKLENRV 472
KHINDD ++LDY+K AKEQ KS+V A++L K ++KL +NRV
Sbjct: 436 KHINDDSRKLDYYKSMVAKEQIKSQVGADSLCKSSEKLSMTTEKNRV 482
>Glyma15g05380.1
Length = 455
Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/330 (58%), Positives = 240/330 (72%), Gaps = 36/330 (10%)
Query: 146 GVKGHEGAKKNKWCRDFFGRLDKVASQVEKLDSPSIRWHCPICRGGPGAIDWYHGLQPLY 205
G + HE KK+KW R+FF +L+ + + E++ S +WHCP C+GG GAIDWY GL PL
Sbjct: 39 GERSHEQCKKSKWLRNFFDKLNALTN--EEISSLDRQWHCPACQGGSGAIDWYKGLHPLL 96
Query: 206 VHAMTIQVRFAIVHRLFADTLKEECRRRGAPLT--SEASGLWEGLDKKLKDHEIVWPPMV 263
H+ TIQ + A +HR+FA+TL+EEC RR APLT S+ +WEGLDKK+KDHEIVWPPMV
Sbjct: 97 DHSRTIQTKRARLHRMFAETLEEECFRRRAPLTTVSDVHDIWEGLDKKVKDHEIVWPPMV 156
Query: 264 IIMNTKSQRGENNKVQQYSCLVFIRVFVFCYFALCFSYAKFFELQWTGMGNQELLDSFSD 323
IIMNT+ ++ E+NK W GMGNQ LLD F D
Sbjct: 157 IIMNTRYEQDESNK-------------------------------WNGMGNQGLLDCFCD 185
Query: 324 YAAMKARHSYGPQGHRGMSVLIFAETPAGYLEAMRLHKHFKEQGRDKEAWGRCRNPYVPG 383
YAA+KARHSYGPQGHRGMS LIF E+ AGYLEA+RLHKHFKEQGRD+EAW RNP++PG
Sbjct: 186 YAALKARHSYGPQGHRGMSALIFEESTAGYLEAVRLHKHFKEQGRDREAWDCYRNPFLPG 245
Query: 384 GRRQLYGYLASGEDLENFNQHS-GKTKLKYELKSYQETVESKIKHINDDIQQLDYFKDKA 442
G+RQLYGYLAS EDL+ FN+HS GKTKLK+E++SYQE VESKIKHINDD ++LDY+K
Sbjct: 246 GKRQLYGYLASKEDLDIFNKHSRGKTKLKFEMRSYQEMVESKIKHINDDSRKLDYYKSMV 305
Query: 443 AKEQFKSEVYANTLSKVTDKLRQAKLENRV 472
AKEQ KS+V A++L ++++KL ENRV
Sbjct: 306 AKEQIKSQVGADSLLRLSEKLSLTTEENRV 335
>Glyma04g38100.1
Length = 628
Score = 328 bits (840), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/330 (51%), Positives = 213/330 (64%), Gaps = 36/330 (10%)
Query: 148 KGHEGAKKNKWCRDFFGRLDKVASQVEKLDSPSIRWHCPICRGGPGAIDWYHGLQPLYVH 207
K HE KK+KW + FF LD + VE+++ P +WHCP C+GGPGAIDWY GLQPL H
Sbjct: 194 KSHETRKKSKWYKKFFEILDGLT--VEQINEPERQWHCPACQGGPGAIDWYRGLQPLVTH 251
Query: 208 AMTIQVRFAIVHRLFADTLKEECRRRGAPL--TSEASGLWEGLDKKLKDHEIVWPPMVII 265
A T + +HR A L EE RRRG + E G W+GL ++ KDHEIVWPPMV+I
Sbjct: 252 AKTKGSKRVKIHRELAILLDEELRRRGTSVIPAGEVFGKWKGLKEEEKDHEIVWPPMVVI 311
Query: 266 MNTKSQRGENNKVQQYSCLVFIRVFVFCYFALCFSYAKFFELQWTGMGNQELLDSFSDYA 325
NTK ++ EN+K W GMGNQELLD FS YA
Sbjct: 312 QNTKLEQDENDK-------------------------------WIGMGNQELLDYFSTYA 340
Query: 326 AMKARHSYGPQGHRGMSVLIFAETPAGYLEAMRLHKHFKEQGRDKEAWGRCRNPYVPGGR 385
A KARHSYGPQGHRGMSVLIF + +GYLEA RLHKHF EQG DK+AW Y+PGG
Sbjct: 341 AAKARHSYGPQGHRGMSVLIFEASASGYLEAERLHKHFAEQGTDKDAWFNRPILYLPGGN 400
Query: 386 RQLYGYLASGEDLENFNQHS-GKTKLKYELKSYQETVESKIKHINDDIQQLDYFKDKAAK 444
RQLYGY+A+ EDL+ FN+HS GK++LKY++ SYQE V +I+ +N+D QQL YFKDKA K
Sbjct: 401 RQLYGYMATKEDLDFFNRHSQGKSRLKYDIMSYQEMVVHQIRQMNEDNQQLLYFKDKAVK 460
Query: 445 EQFKSEVYANTLSKVTDKLRQAKLENRVVR 474
++ ++ +++KLR+ ENR+VR
Sbjct: 461 GAKHTKALEESIGIMSEKLRKTMEENRIVR 490
>Glyma05g33260.1
Length = 687
Score = 319 bits (818), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 165/331 (49%), Positives = 219/331 (66%), Gaps = 37/331 (11%)
Query: 148 KGHEGAKKNKWCRDFFGRLDKVASQVEKLDSPSIRWHCPICRGGPGAIDWYHGLQPLYVH 207
K HE KK+KW +DFF LD ++ +EK++ P +WHC CRGGPGAIDWY GLQPL H
Sbjct: 251 KSHETRKKSKWFKDFFENLDGLS--IEKINEPERQWHCTACRGGPGAIDWYRGLQPLITH 308
Query: 208 AMTIQVRFAIVHRLFADTLKEECRRRGAPLTS--EASGLWEGLDKKLKDHEIVWPPMVII 265
A T + +HR FA+ L+EE R+RG+ + E G W+GL + KDHEIVWPPMV+I
Sbjct: 309 AKTKGSKRVKIHREFAELLEEELRKRGSAVIPPGEVFGKWKGLKDEEKDHEIVWPPMVVI 368
Query: 266 MNTKSQRGENNKVQQYSCLVFIRVFVFCYFALCFSYAKFFELQWTGMGNQELLDSFSDYA 325
NT+ ++ EN+K W GMGNQELL+ FS Y
Sbjct: 369 QNTRLEQDENDK-------------------------------WLGMGNQELLNYFSAYD 397
Query: 326 AMKARHSYGPQGHRGMSVLIFAETPAGYLEAMRLHKHFKEQGRDKEAW-GRCRNPYVPGG 384
A+KARH+YGPQGHRG+SVLIF + GYLEA RLHKHF EQG D++AW R ++PGG
Sbjct: 398 AVKARHAYGPQGHRGLSVLIFEASAIGYLEAERLHKHFAEQGTDRDAWFSHHRRLFLPGG 457
Query: 385 RRQLYGYLASGEDLENFNQH-SGKTKLKYELKSYQETVESKIKHINDDIQQLDYFKDKAA 443
RRQLYGY+A EDL+ FN+H GK++LKY+++SYQE V ++++ +N+D Q L Y KD+ A
Sbjct: 458 RRQLYGYMAIKEDLDFFNRHCQGKSRLKYDMRSYQEMVVNQLRQMNEDNQLLIYLKDRDA 517
Query: 444 KEQFKSEVYANTLSKVTDKLRQAKLENRVVR 474
K+Q +++ +L VT+KLR+ ENR+VR
Sbjct: 518 KKQKQTKALEESLGIVTEKLRRTMEENRIVR 548
>Glyma06g16960.1
Length = 638
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 153/305 (50%), Positives = 200/305 (65%), Gaps = 34/305 (11%)
Query: 173 VEKLDSPSIRWHCPICRGGPGAIDWYHGLQPLYVHAMTIQVRFAIVHRLFADTLKEECRR 232
VE+++ P +WHCP C+GGPGAIDWY GLQPL HA T + +HR A L EE RR
Sbjct: 233 VEQINEPERQWHCPACQGGPGAIDWYRGLQPLVTHAKTKGSKRVKIHRELAILLDEELRR 292
Query: 233 RGAPL--TSEASGLWEGLDKKLKDHEIVWPPMVIIMNTKSQRGENNKVQQYSCLVFIRVF 290
RG + E G W+GL ++ KDH+IVWPPMV+I NTK ++ EN+K
Sbjct: 293 RGTSVIPAGEVFGKWKGLKEEEKDHDIVWPPMVVIQNTKLEQDENDK------------- 339
Query: 291 VFCYFALCFSYAKFFELQWTGMGNQELLDSFSDYAAMKARHSYGPQGHRGMSVLIFAETP 350
W GMGNQELLD FS Y A++ARHSYGPQGHRGMSVLIF +
Sbjct: 340 ------------------WIGMGNQELLDYFSTYDAVRARHSYGPQGHRGMSVLIFEASA 381
Query: 351 AGYLEAMRLHKHFKEQGRDKEAWGRCRNPYVPGGRRQLYGYLASGEDLENFNQHS-GKTK 409
+GYLEA RLHKHF EQG DK++W Y+PGG RQLYGY+A+ ED++ FN+HS GK++
Sbjct: 382 SGYLEAERLHKHFAEQGTDKDSWFSRPILYLPGGNRQLYGYMATKEDMDFFNRHSQGKSR 441
Query: 410 LKYELKSYQETVESKIKHINDDIQQLDYFKDKAAKEQFKSEVYANTLSKVTDKLRQAKLE 469
LKY+++SYQE V +I+ +N+D QQL YFK+KA K ++ ++ +++KLR+ E
Sbjct: 442 LKYDIRSYQEMVVHQIRQMNEDNQQLLYFKNKAVKGAKHTKALEESIGIMSEKLRKTMEE 501
Query: 470 NRVVR 474
NR+VR
Sbjct: 502 NRIVR 506
>Glyma19g09970.1
Length = 171
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 114/165 (69%), Positives = 135/165 (81%), Gaps = 1/165 (0%)
Query: 309 WTGMGNQELLDSFSDYAAMKARHSYGPQGHRGMSVLIFAETPAGYLEAMRLHKHFKEQGR 368
W GMGNQELLD F DYAA+KARHSYGPQGHRGMS LIF E+ GYLEA+RLHKHFKEQG
Sbjct: 1 WNGMGNQELLDCFCDYAALKARHSYGPQGHRGMSALIFEESTIGYLEALRLHKHFKEQGI 60
Query: 369 DKEAWGRCRNPYVPGGRRQLYGYLASGEDLENFNQHS-GKTKLKYELKSYQETVESKIKH 427
D+EAW +NP++PGG+RQLYGYLAS EDL+ FN+HS KTKLK+E++SYQE VESKIKH
Sbjct: 61 DREAWDCYQNPFLPGGKRQLYGYLASKEDLDIFNKHSRRKTKLKFEMRSYQEMVESKIKH 120
Query: 428 INDDIQQLDYFKDKAAKEQFKSEVYANTLSKVTDKLRQAKLENRV 472
INDD Q LDY+K AKEQ KS+V ++L ++++KL ENRV
Sbjct: 121 INDDSQNLDYYKSMVAKEQIKSQVGTDSLLRISEKLSLTTEENRV 165
>Glyma08g00860.1
Length = 244
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 67/124 (54%), Gaps = 20/124 (16%)
Query: 148 KGHEGAKKNKWCRDFFGRLDKVASQVEKLDSPSIRWHCPICRGGPGAIDWYHGLQPLYVH 207
K HE KK+K +DFF LD ++ +EK++ P +WH LQPL H
Sbjct: 135 KSHETRKKSKCFKDFFENLDSLS--IEKINEPERQWH---------------RLQPLITH 177
Query: 208 AMTIQVRFAIVHRLFADTLKEECRRRGAPLTS--EASGLWEGLDKKLKDHEIVWPPMVII 265
T + +HR FA L+ E RRRG + E G W+GL K KDHEIVWPPMV+I
Sbjct: 178 GKTKGSKKVKIHREFAALLEVELRRRGTSVIPPGEVFGKWKGL-KDEKDHEIVWPPMVVI 236
Query: 266 MNTK 269
NT+
Sbjct: 237 QNTR 240
>Glyma02g29300.1
Length = 96
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 10/76 (13%)
Query: 312 MGNQELLDSFSDYAAMKARHSYGPQGHRGMSVLIFAETPAGYLEAMRLHKHFKEQGRDKE 371
MGNQELL+ FS Y +KARHSYGP R + + GYLEA RLHKHF EQG D++
Sbjct: 1 MGNQELLNYFSAYDVVKARHSYGP---RDIGAI-------GYLEAERLHKHFAEQGTDRD 50
Query: 372 AWGRCRNPYVPGGRRQ 387
AW ++ G +R+
Sbjct: 51 AWFSHHPLWIHGNKRR 66
>Glyma20g28430.2
Length = 183
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 80/185 (43%), Gaps = 50/185 (27%)
Query: 253 KDHEIVWPPMVIIMNTKSQRGENNKVQQYSCLVFIRVFVFCYFALCFSYAKFFELQWTGM 312
+D I+WPP+VII NT + + + +++ G+
Sbjct: 27 QDDLIMWPPLVIIHNTNTGKNRDGRME-------------------------------GL 55
Query: 313 GNQELLDSFSD--YAAMKARHSYGPQGHRGMSVLIFAETPAGYLEAMRLHKHFKEQGRDK 370
GN+ + + + + K++ YG GH G++++ FA +G+ EA+RL +HF+++ +
Sbjct: 56 GNKMMDNKIRELGFVGGKSKSLYGRDGHLGITLVKFAGDQSGFKEAIRLAEHFEKENHGR 115
Query: 371 EAWGRCRNPYV-----------------PGGRRQLYGYLASGEDLENFNQHSGKTKLKYE 413
+ W R ++ + RR LYGYL + DL+ + + K
Sbjct: 116 KDWDRVQSQTLGKDDENNANLVKVDEKKVDKRRVLYGYLGTAFDLDKVDFDTRKKAFIES 175
Query: 414 LKSYQ 418
+ Y+
Sbjct: 176 RREYK 180
>Glyma20g28430.1
Length = 475
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 50/169 (29%)
Query: 253 KDHEIVWPPMVIIMNTKSQRGENNKVQQYSCLVFIRVFVFCYFALCFSYAKFFELQWTGM 312
+D I+WPP+VII NT + + + +++ G+
Sbjct: 319 QDDLIMWPPLVIIHNTNTGKNRDGRME-------------------------------GL 347
Query: 313 GNQELLDSFSD--YAAMKARHSYGPQGHRGMSVLIFAETPAGYLEAMRLHKHFKEQGRDK 370
GN+ + + + + K++ YG GH G++++ FA +G+ EA+RL +HF+++ +
Sbjct: 348 GNKMMDNKIRELGFVGGKSKSLYGRDGHLGITLVKFAGDQSGFKEAIRLAEHFEKENHGR 407
Query: 371 EAWGRCRNPYV-----------------PGGRRQLYGYLASGEDLENFN 402
+ W R ++ + RR LYGYL + DL+ +
Sbjct: 408 KDWDRVQSQTLGKDDENNANLVKVDEKKVDKRRVLYGYLGTAFDLDKVD 456
>Glyma10g39340.1
Length = 183
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 80/185 (43%), Gaps = 50/185 (27%)
Query: 253 KDHEIVWPPMVIIMNTKSQRGENNKVQQYSCLVFIRVFVFCYFALCFSYAKFFELQWTGM 312
+D I+WPP+VII NT + + + +++ G+
Sbjct: 27 QDDLIMWPPLVIIHNTNTGKNRDGRME-------------------------------GL 55
Query: 313 GNQELLDSFSD--YAAMKARHSYGPQGHRGMSVLIFAETPAGYLEAMRLHKHFKEQGRDK 370
GN+ + + + + K++ YG GH G++++ FA +G+ EA+RL +HF+++ +
Sbjct: 56 GNKTMDNKIRELGFVGGKSKSLYGRDGHLGITLVKFAGDESGFKEAIRLAEHFEKENHGR 115
Query: 371 EAWGRCRNPYV-----------------PGGRRQLYGYLASGEDLENFNQHSGKTKLKYE 413
+ W ++ + RR LYGYL + DL+ + + K +
Sbjct: 116 KDWAHVQSQTLGKDDENNANLVKVDEKKGDKRRVLYGYLGTAFDLDKVDFDTRKKAVIES 175
Query: 414 LKSYQ 418
+ Y+
Sbjct: 176 RREYK 180