Miyakogusa Predicted Gene

Lj6g3v2245600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2245600.1 Non Chatacterized Hit- tr|I1HQS0|I1HQS0_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,41.84,2e-19,CBS,Cystathionine beta-synthase, core; no
description,Aldolase-type TIM barrel; seg,NULL; Domain in
,CUFF.60965.1
         (139 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g00270.1                                                       201   2e-52
Glyma01g00330.1                                                       144   3e-35

>Glyma14g00270.1 
          Length = 741

 Score =  201 bits (510), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 99/139 (71%), Positives = 109/139 (78%)

Query: 1   MKTRYVSVSMCTLLTEVIDLMLVEKQSCAVXXXXXXXXXXXXXXXXXQDYGKFAKARSKN 60
           MKTRYV+VSMCT L EVIDLML EKQSCAV                 Q+YGKFAKARS  
Sbjct: 603 MKTRYVAVSMCTPLIEVIDLMLAEKQSCAVIVDTDDTLIGFLTLRDIQEYGKFAKARSTK 662

Query: 61  PKELLVSELCLLDGGICSVPWTATPDMELRFAQMIMKEHGVDQVPVVRNIYEKTYPVGIL 120
            KELLVSE CLL+G ICSVPWTATPDMEL +AQMIMKE   + VPVVRNIYE+TYPVGI+
Sbjct: 663 HKELLVSEFCLLNGEICSVPWTATPDMELHYAQMIMKERRFNHVPVVRNIYERTYPVGII 722

Query: 121 DPDSINLTCSALATRESLS 139
           DP+SI+LTCSALATR+SLS
Sbjct: 723 DPESISLTCSALATRQSLS 741


>Glyma01g00330.1 
          Length = 342

 Score =  144 bits (362), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/135 (55%), Positives = 85/135 (62%), Gaps = 6/135 (4%)

Query: 1   MKTRYVSVSMCTLLTEVIDLMLVEKQSCAVXXXXXXXXXXXXXXXXXQDYG------KFA 54
           MK RYV VSMCT L EVIDLML EKQSC V                 Q+Y       +  
Sbjct: 190 MKMRYVVVSMCTPLIEVIDLMLAEKQSCVVIVDTDDTLIGFLTLRDIQEYAILYHQLELV 249

Query: 55  KARSKNPKELLVSELCLLDGGICSVPWTATPDMELRFAQMIMKEHGVDQVPVVRNIYEKT 114
                   ELLVSE  LL+G ICSV WTATPD EL +AQMIMK+   + VPVVRNIYE+T
Sbjct: 250 DTYHNTCSELLVSEFFLLNGEICSVSWTATPDTELHYAQMIMKKRRFNHVPVVRNIYERT 309

Query: 115 YPVGILDPDSINLTC 129
           YPVGI+DP+SI+LTC
Sbjct: 310 YPVGIIDPESISLTC 324