Miyakogusa Predicted Gene

Lj6g3v2243320.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2243320.1 tr|Q9C8Z3|Q9C8Z3_ARATH Agenet domain-containing
protein OS=Arabidopsis thaliana GN=F5E6.15 PE=4
SV=1,29.63,1e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Tudor-like domain present in plant sequences,Tudor-,CUFF.60990.1
         (320 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g22810.1                                                       141   7e-34
Glyma16g29630.1                                                        78   1e-14
Glyma16g26120.1                                                        61   1e-09
Glyma09g24640.1                                                        52   1e-06
Glyma09g03740.1                                                        50   4e-06
Glyma05g08290.2                                                        49   8e-06
Glyma05g08290.1                                                        49   8e-06

>Glyma20g22810.1 
          Length = 323

 Score =  141 bits (356), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 111/319 (34%), Positives = 152/319 (47%), Gaps = 52/319 (16%)

Query: 9   FQKPGTEVEIFSKGDEGIR-IWSVGKVIHGNHS-HVMVEYTYC---EQGTNPRVEFVSID 63
           F KPGT VE+ S+ D+G R  W  G VI    S   +VEY      ++ T    E + + 
Sbjct: 21  FFKPGTAVEVSSE-DDGFRGSWFTGTVIRRLASERFLVEYDNLLADDKTTKKLREVLGLR 79

Query: 64  NLRPRPPLKPHHDFKSGDKVDTYNDKGSWLEGHITSTLSDGRSFVCYNDPNQKFLFPNEK 123
           +LRP PP +   +FK GD+VD +++ G W EGHIT  L + R  V +    ++ +F  E+
Sbjct: 80  HLRPLPPTETDREFKFGDEVDAFHNDG-WWEGHITQELENERFAVYFRVSKEQLVFSKEQ 138

Query: 124 LRAHHEWIDDHWGPPTQ-----------------QPKKAEQELFRK-----GDWVEVSSD 161
           LR H EW++  W PP Q                  P     E  +      G  VEVSSD
Sbjct: 139 LRLHREWLNHDWVPPLQQKQQRQQGNGESKKVLLTPNVKSVETVKGKGIGVGAIVEVSSD 198

Query: 162 VDGYLETWFLAEVVEVRVQGKFKYLVRYKHLLDDNSPKYLEEEIDAQHIRPLAPNTRDGD 221
            DG+   WF A VVE    GK K+LV Y  LL D+  + L EEIDA HIRP   +T    
Sbjct: 199 EDGFSGAWFAATVVE--ALGKDKFLVEYHDLLADDDSQ-LREEIDALHIRPHPLDT---- 251

Query: 222 AKLGLVGKVDTWHIGDCDAKYKLGDRVDAWSLSGWRYAKIIEVQNDNIYKVFLKGDEQEK 281
                          D D ++ + D VDA+   GW    I +   D+ Y V+ +   +E 
Sbjct: 252 ---------------DVDGQFSILDEVDAFYNDGWWVGVISKALADSRYVVYFRSSNEEL 296

Query: 282 DNFDPITLRRHYDWVDRKW 300
           + F+   LR H DW+  KW
Sbjct: 297 E-FENSQLRLHQDWIGGKW 314



 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 60/137 (43%), Gaps = 10/137 (7%)

Query: 13  GTEVEIFSKGDEGIRIWSVGKVIHG-NHSHVMVEY--TYCEQGTNPRVEFVSIDNLRPRP 69
           G  VE+ S  D     W    V+        +VEY     +  +  R E   ID L  RP
Sbjct: 190 GAIVEVSSDEDGFSGAWFAATVVEALGKDKFLVEYHDLLADDDSQLREE---IDALHIRP 246

Query: 70  -PLKPHHD--FKSGDKVDTYNDKGSWLEGHITSTLSDGRSFVCYNDPNQKFLFPNEKLRA 126
            PL    D  F   D+VD + + G W+ G I+  L+D R  V +   N++  F N +LR 
Sbjct: 247 HPLDTDVDGQFSILDEVDAFYNDGWWV-GVISKALADSRYVVYFRSSNEELEFENSQLRL 305

Query: 127 HHEWIDDHWGPPTQQPK 143
           H +WI   W  P +  K
Sbjct: 306 HQDWIGGKWVMPCKALK 322


>Glyma16g29630.1 
          Length = 499

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 11/135 (8%)

Query: 1   MTSKPASPFQKPGTEVEIFSKGDEGIRIWSVGKVIHGNHSHVMVEYTYCEQGTNPRVEFV 60
           M  KP         EV I+         W  G +I  ++S   +   +C    +  +  V
Sbjct: 1   MVPKPMVFELGSAVEVSIYDGS------WFSGTIIGCDNSDRFLVQYHCN---SVEIAVV 51

Query: 61  SIDNLRPRPPLKPHHDFKSGDKVDTYNDKGSWLEGHITSTLSDGRSFVCYNDPNQKFLFP 120
           S+ +LRP PP   H +FKSGDKV+ ++D   W EGHIT  L +GR FV     +++  FP
Sbjct: 52  SLHHLRPLPPPNSHQEFKSGDKVEVFHDH-CWREGHITGDLVNGR-FVVSFRYSKEMTFP 109

Query: 121 NEKLRAHHEWIDDHW 135
            E+LR H +WI+D+W
Sbjct: 110 KEQLREHRQWINDNW 124


>Glyma16g26120.1 
          Length = 103

 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)

Query: 58  EFVSIDNLRPRPPLKPHHDFKSGDKVDTYNDKGSWLEGHITSTLSDGRSFVCYNDPNQKF 117
           E V++  LR  PP + H +FK  DKV  +++   W EGHIT  L +GR  V +    +  
Sbjct: 19  EVVNLHQLRTLPPPEKHQEFKFRDKVGAFHNDSLW-EGHITQKLGNGRFCVYFPVSEENM 77

Query: 118 LFPNEKLRAHHEWIDDHWGPPTQQPK 143
           +F   KLR H++WI+ +W  P    K
Sbjct: 78  VFSKNKLRTHYKWINHNWVLPITNHK 103


>Glyma09g24640.1 
          Length = 59

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 2/60 (3%)

Query: 73  PHHDFKSGDKVDTYNDKGSWLEGHITSTLSDGRSFVCYNDPNQKFLFPNEKLRAHHEWID 132
            HH+F SGD V+ +  K  W EG +T TL +GR  V +ND  ++  F  E LRA  +WI+
Sbjct: 1   SHHEFNSGDNVEAFR-KDRWWEGRVTETLGNGRFIVSFNDS-EEITFSKELLRAPLQWIN 58


>Glyma09g03740.1 
          Length = 263

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 143 KKAEQELFRKGDWVEVSSDVDGYLETWFLAEVVEVRVQGKFKYLVRYKHLLDDNSPKYLE 202
           ++ ++  F+KG   EVS D  GY   WFL  VV++   GK ++ V Y+ L  +   + L+
Sbjct: 11  RQLKESKFKKGIVEEVSRDDKGYKGVWFLDTVVDI--IGKDRFQVEYRDLKTNGGTQLLK 68

Query: 203 EEIDAQHIRPLAPNT 217
           EEIDA+ IRP  P  
Sbjct: 69  EEIDARLIRPCPPEV 83


>Glyma05g08290.2 
          Length = 397

 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 28/173 (16%)

Query: 150 FRKGDWVEVSSDVDGYLETWFLAEVVEVRVQGKFKYLVRYKHLLDDNSPKYLEEEIDAQH 209
           F+KG+ VEV S V+    +W  AE++         Y V+Y     D + + + E++  + 
Sbjct: 3   FKKGNKVEVLSKVEVPCGSWLYAEII---CGNGHHYTVKYDGYESD-AGEAIVEQVSRKD 58

Query: 210 IRPLAPNTRDGDAKLGLVGKVDTWHIGDCDAKYKLGDRVDAWSLSGWRYAKIIEVQNDNI 269
           IRP  P           +   D W+ GD          V+ +    W+ A +++V   N 
Sbjct: 59  IRPCPP----------ALELTDNWNSGDV---------VEVFQNFSWKMATVLKVFGKNH 99

Query: 270 YKVFLKGD--EQEKDNFDPITLRRHYDWVDRKWEIASQGSSCSSDEEYGFAQI 320
             V L G   E +   FD   +R    W D KW I  +GSS   + +   AQ+
Sbjct: 100 ILVRLLGSSLEFQVSKFD---IRVRQSWQDDKWIIVGKGSSSHENRKRSSAQL 149


>Glyma05g08290.1 
          Length = 397

 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 28/173 (16%)

Query: 150 FRKGDWVEVSSDVDGYLETWFLAEVVEVRVQGKFKYLVRYKHLLDDNSPKYLEEEIDAQH 209
           F+KG+ VEV S V+    +W  AE++         Y V+Y     D + + + E++  + 
Sbjct: 3   FKKGNKVEVLSKVEVPCGSWLYAEII---CGNGHHYTVKYDGYESD-AGEAIVEQVSRKD 58

Query: 210 IRPLAPNTRDGDAKLGLVGKVDTWHIGDCDAKYKLGDRVDAWSLSGWRYAKIIEVQNDNI 269
           IRP  P           +   D W+ GD          V+ +    W+ A +++V   N 
Sbjct: 59  IRPCPP----------ALELTDNWNSGDV---------VEVFQNFSWKMATVLKVFGKNH 99

Query: 270 YKVFLKGD--EQEKDNFDPITLRRHYDWVDRKWEIASQGSSCSSDEEYGFAQI 320
             V L G   E +   FD   +R    W D KW I  +GSS   + +   AQ+
Sbjct: 100 ILVRLLGSSLEFQVSKFD---IRVRQSWQDDKWIIVGKGSSSHENRKRSSAQL 149