Miyakogusa Predicted Gene

Lj6g3v2222030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2222030.1 tr|B9I204|B9I204_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_772475 PE=4
SV=1,27.85,0.00000000000002,coiled-coil,NULL; seg,NULL,CUFF.60896.1
         (420 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g05640.1                                                       197   2e-50
Glyma08g19350.1                                                       138   1e-32

>Glyma15g05640.1 
          Length = 300

 Score =  197 bits (501), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/263 (47%), Positives = 147/263 (55%), Gaps = 29/263 (11%)

Query: 157 EKEGSRVLGDGNLVRPMEDVVRDXXXXXXXX----XXXXXXXXXXXXXXXXXVEIANKAL 212
           EK   RV G GNLVR MED+V D                             +EIAN AL
Sbjct: 3   EKGSPRVFGGGNLVRSMEDLVEDAKRAVGEKVEAAARARDEAMQKAMVARSALEIANNAL 62

Query: 213 SLVANKEDCSLNLHTKMGPVKVVDGAELSFELHSNLNGTPKIAKSWCLLNSTCFDAPKRF 272
           SLVAN+E+ SLNL  KM  VKV+DG+EL+FELH   N  P+I+KS CLLN +  D PKR+
Sbjct: 63  SLVANREESSLNLPPKMDAVKVLDGSELTFELHPRFNSLPRISKSCCLLNVSYLDTPKRW 122

Query: 273 ASGVDSSFKISNSRNVGGCDDMHEVFNDIKLYKDSHKSLREPSVSIG-SLDTDSSNDLNC 331
            S VD S K S SRN     D HE+ ND                S+G +LD+ S  DLN 
Sbjct: 123 TSSVDLSCKTSKSRNASD-RDKHEISND----------------SVGAALDSGSLTDLNL 165

Query: 332 LCMGRSDMKNSPKVGRCTAALDVKVIAEELLKQGEGSCSNRLINFNGEDCGMECDRKLAD 391
           LCMG S M    + G   A    + I EELL +GEGSCS+RLINF+ ED GME D K AD
Sbjct: 166 LCMGTSGM----ETGLRAAEFGSEGIGEELLNEGEGSCSDRLINFS-EDSGMELDHKQAD 220

Query: 392 YAFHREERC--QQDRYILKYSRR 412
              HREE+C  Q DRY  KYSRR
Sbjct: 221 SPLHREEQCIRQPDRYFFKYSRR 243


>Glyma08g19350.1 
          Length = 282

 Score =  138 bits (347), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/215 (51%), Positives = 134/215 (62%), Gaps = 27/215 (12%)

Query: 205 VEIANKALSLVA-NKEDCS-LNLHTKMG-PVKVVDGAELSFELHSNLN-GTPKIAKSWCL 260
           VEIAN ALSLVA N+E+ S LNL  K+   VKV+DG+E +FELH   + G P+I+KS CL
Sbjct: 37  VEIANNALSLVAKNREESSCLNLPPKVDDAVKVLDGSEFTFELHPCFDRGLPRISKSCCL 96

Query: 261 LNSTCFDAPKRFASGVDSSFKISNSRNVGGCDDMHEVFNDIKLYKDSHKSLREPSVSIGS 320
           LN++ FD  KR+ S VD S KIS SRN                 +D H+ +   SV   +
Sbjct: 97  LNASYFDTSKRWTSSVDLSCKISKSRNASD--------------RDKHEVVSNNSVG-AA 141

Query: 321 LDTDSSNDLNCLCMGRSDMKNSPKVGRCTAALDVKVI-AEELLKQGEGSCSNRLINFNGE 379
           LD+ S  DLN L MG S M    + G  TA  D + I  EELLK+GEGSCS+RLINF+ E
Sbjct: 142 LDSGSLTDLNLLYMGTSGM----ETGLGTAEFDSEGIGEEELLKEGEGSCSDRLINFS-E 196

Query: 380 DCGMECDRKLADYAFHREERC--QQDRYILKYSRR 412
           D GME D K AD A H EE+C  Q DRY+ KYSRR
Sbjct: 197 DSGMELDHKQADSALHGEEQCNGQPDRYLFKYSRR 231