Miyakogusa Predicted Gene

Lj6g3v2221970.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2221970.1 Non Chatacterized Hit- tr|Q60EC1|Q60EC1_ORYSJ
Putative clathrin assembly protein OS=Oryza sativa
sub,47.86,4e-19,seg,NULL; ENTH,Epsin-like, N-terminal; CLATHRIN
ASSEMBLY PROTEIN,NULL; no description,ENTH/VHS; ANTH,CUFF.60891.1
         (103 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g19330.1                                                       145   1e-35
Glyma15g05660.1                                                       141   1e-34
Glyma05g24940.1                                                       115   1e-26
Glyma06g07140.1                                                        89   1e-18
Glyma13g22680.1                                                        66   1e-11
Glyma13g13510.1                                                        65   2e-11
Glyma15g14830.1                                                        60   4e-10
Glyma04g07050.1                                                        59   1e-09
Glyma04g09540.1                                                        54   4e-08
Glyma13g22970.1                                                        54   5e-08
Glyma17g11910.2                                                        53   8e-08
Glyma17g11910.1                                                        53   8e-08
Glyma04g26430.1                                                        52   1e-07
Glyma10g05200.1                                                        49   9e-07

>Glyma08g19330.1 
          Length = 593

 Score =  145 bits (365), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 71/102 (69%), Positives = 80/102 (78%), Gaps = 5/102 (4%)

Query: 1   MSDFRDNSKTGAWDFSAFVRTYSLYLDERLEYKMQSRRGKRGVVAYXXXXXXXXXXXXXX 60
           MSDFRD+ K+G+WDFSAFVRTY+LYLDERLEYKMQSRRGKR + ++              
Sbjct: 123 MSDFRDSLKSGSWDFSAFVRTYALYLDERLEYKMQSRRGKRSMYSF-----DEDEEERER 177

Query: 61  XXXXXIVIRSTPVRDMKLEQIFSKMQHLQLLLERFLACRPTG 102
                I++RSTPVRDMKLEQIFSKMQHLQLLLERFLACRPTG
Sbjct: 178 EKEKEIIVRSTPVRDMKLEQIFSKMQHLQLLLERFLACRPTG 219


>Glyma15g05660.1 
          Length = 596

 Score =  141 bits (356), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 70/102 (68%), Positives = 77/102 (75%), Gaps = 7/102 (6%)

Query: 1   MSDFRDNSKTGAWDFSAFVRTYSLYLDERLEYKMQSRRGKRGVVAYXXXXXXXXXXXXXX 60
           MSDFRDNSK+ +WDFSAFVRTY+LYLDERLEYKMQSRRG R +                 
Sbjct: 123 MSDFRDNSKSDSWDFSAFVRTYALYLDERLEYKMQSRRGMRSMYG-------LDEDEEER 175

Query: 61  XXXXXIVIRSTPVRDMKLEQIFSKMQHLQLLLERFLACRPTG 102
                I++RSTPVRDMKL+QIFSKMQHLQLLLERFLACRPTG
Sbjct: 176 EREKEIIVRSTPVRDMKLDQIFSKMQHLQLLLERFLACRPTG 217


>Glyma05g24940.1 
          Length = 575

 Score =  115 bits (287), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/105 (55%), Positives = 70/105 (66%), Gaps = 3/105 (2%)

Query: 1   MSDFRDNSKTGAWDFSAFVRTYSLYLDERLEYKMQSRRGKRGVVAYXXXXXXXXXXXXXX 60
           MSDFR NSK  +WDF AFVRTY+LYLDERLEY MQ++RGKR   A               
Sbjct: 122 MSDFRGNSKYNSWDFCAFVRTYALYLDERLEYMMQNKRGKRSRFAIDEEEEETMERESRY 181

Query: 61  X---XXXXIVIRSTPVRDMKLEQIFSKMQHLQLLLERFLACRPTG 102
                    +++ TP+ +MK E++FSKMQHLQLL+ERFLACRPTG
Sbjct: 182 SREREKNREILKVTPLCEMKTEELFSKMQHLQLLVERFLACRPTG 226


>Glyma06g07140.1 
          Length = 641

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 53/137 (38%), Positives = 65/137 (47%), Gaps = 34/137 (24%)

Query: 1   MSDFRDNSKTGAWDFSAFVRTYSLYLDERLEYKMQSRRGK-------------------- 40
           MSDFRD + + +WD SAFVRTY+LYLD+RLE  +  R+G                     
Sbjct: 121 MSDFRDEAHSSSWDHSAFVRTYALYLDQRLELMLFDRKGTVSAANGGGDDRFGGRDNFQS 180

Query: 41  ----------RGVVAY----XXXXXXXXXXXXXXXXXXXIVIRSTPVRDMKLEQIFSKMQ 86
                     RG  AY                        V+  TP+RDM  E++F KM 
Sbjct: 181 PPYEYGGGEFRGEGAYGNGMRKTRSYGDMSESVGRGEEKRVVSVTPLRDMTPERVFGKMG 240

Query: 87  HLQLLLERFLACRPTGL 103
           HLQ LL+RFLACRPTGL
Sbjct: 241 HLQRLLDRFLACRPTGL 257


>Glyma13g22680.1 
          Length = 612

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 7/102 (6%)

Query: 1   MSDFRDNSKTGAWDFSAFVRTYSLYLDERLEYKMQSRRGKRGVVAYXXXXXXXXXXXXXX 60
           MSDFRD++ + +WD   FVR YSLYLD ++++    R+   GVV                
Sbjct: 122 MSDFRDDAHSNSWDQVGFVRVYSLYLDAKVDFVAYRRKLSGGVVESVEFRDEFGSAERER 181

Query: 61  XXXXXIVIRSTPVRDMKLEQIFSKMQHLQLLLERFLACRPTG 102
                     TPVR+M  E++  ++  L  +L+R L CRP+G
Sbjct: 182 NEV-------TPVREMGAERVLKRLNRLLRMLDRVLGCRPSG 216


>Glyma13g13510.1 
          Length = 318

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 12/104 (11%)

Query: 1   MSDFRDNSKTGAWDFSAFVRTYSLYLDERLEYKMQSRRGKRGVVAYXXXXXXXXXXXXXX 60
           +S+F+DNS + +WD++AF+RT++LYLDERL+  +  +  +R    Y              
Sbjct: 118 LSNFKDNSNSSSWDYTAFIRTFALYLDERLDCFLTGKLQRR--FTYHNQFHERNQKNK-- 173

Query: 61  XXXXXIVIRSTP-VRDMKLEQIFSKMQHLQLLLERFLACRPTGL 103
                  + + P ++DMK   +  ++ H Q LL+R +  RPTGL
Sbjct: 174 -------LSNEPGIKDMKPTMVLDRISHWQRLLDRAIGSRPTGL 210


>Glyma15g14830.1 
          Length = 279

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 7/102 (6%)

Query: 1   MSDFRDNSKTGAWDFSAFVRTYSLYLDERLEYKMQSRRGKRGVVAYXXXXXXXXXXXXXX 60
           MSDFRD++ + + D   FVR YSLYLD ++++    R+    VV                
Sbjct: 54  MSDFRDDAHSNSSDQVGFVRVYSLYLDAKVDFVAYRRKLSGRVVESVEFRDEFGSAEREG 113

Query: 61  XXXXXIVIRSTPVRDMKLEQIFSKMQHLQLLLERFLACRPTG 102
                     TPVR+M  E++  ++ HL  +L+R L CRP G
Sbjct: 114 N-------EVTPVREMGAERVLKRLNHLLWMLDRVLGCRPNG 148


>Glyma04g07050.1 
          Length = 652

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 25/37 (67%), Positives = 30/37 (81%)

Query: 67  VIRSTPVRDMKLEQIFSKMQHLQLLLERFLACRPTGL 103
           V+  TP+RDM  E++F KM HLQ LL+RFLACRPTGL
Sbjct: 230 VVSVTPLRDMTPERVFGKMGHLQKLLDRFLACRPTGL 266



 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 30/38 (78%)

Query: 1   MSDFRDNSKTGAWDFSAFVRTYSLYLDERLEYKMQSRR 38
           MSDFRD + + +WD SAFVRTY++YLD+RL+  +  R+
Sbjct: 121 MSDFRDEAHSSSWDHSAFVRTYAMYLDQRLDLMLFDRK 158


>Glyma04g09540.1 
          Length = 187

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 7/102 (6%)

Query: 1   MSDFRDNSKTGAWDFSAFVRTYSLYLDERLEYKMQSRRGKRGVVAYXXXXXXXXXXXXXX 60
           MSDFRD++ + + D   FVR YSLYLD ++++    R+   GVV                
Sbjct: 57  MSDFRDDTHSNSPDQVGFVRVYSLYLDMKVDFGAYRRKLSDGVVESVEFRDEFGSTERER 116

Query: 61  XXXXXIVIRSTPVRDMKLEQIFSKMQHLQLLLERFLACRPTG 102
                   + T V++M +E++  ++  L  + +R L CRP G
Sbjct: 117 N-------KVTLVKEMGVERVLKRLNCLLRMFDRALGCRPNG 151


>Glyma13g22970.1 
          Length = 546

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 38/108 (35%)

Query: 1   MSDFRDNSKTGAWDFSAFVRTYSLYLDERLE------YKMQSRRGKRGVVAYXXXXXXXX 54
           M+ F+D+S   AWD+SA+VRTY+L+L+ERLE      Y +++ R +              
Sbjct: 125 MAHFKDDSSPNAWDYSAWVRTYALFLEERLECFRVLKYDIEADRPR-------------- 170

Query: 55  XXXXXXXXXXXIVIRSTPVRDMKLEQIFSKMQHLQLLLERFLACRPTG 102
                              +D+   ++  ++  LQ LL R + C+P G
Sbjct: 171 ------------------TKDLDTAELLEQLPTLQQLLHRVIDCQPHG 200


>Glyma17g11910.2 
          Length = 548

 Score = 52.8 bits (125), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 38/106 (35%)

Query: 1   MSDFRDNSKTGAWDFSAFVRTYSLYLDERLE------YKMQSRRGKRGVVAYXXXXXXXX 54
           M+ F+D+S   AWD+SA+VRTY+L+L+ERLE      Y +++ R +              
Sbjct: 125 MAHFKDDSSPNAWDYSAWVRTYALFLEERLECFRVLKYDIEADRPR-------------- 170

Query: 55  XXXXXXXXXXXIVIRSTPVRDMKLEQIFSKMQHLQLLLERFLACRP 100
                              +D+   ++  ++  LQ LL R + C+P
Sbjct: 171 ------------------TKDLDTAELLEQLPALQQLLNRVIGCQP 198


>Glyma17g11910.1 
          Length = 548

 Score = 52.8 bits (125), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 38/106 (35%)

Query: 1   MSDFRDNSKTGAWDFSAFVRTYSLYLDERLE------YKMQSRRGKRGVVAYXXXXXXXX 54
           M+ F+D+S   AWD+SA+VRTY+L+L+ERLE      Y +++ R +              
Sbjct: 125 MAHFKDDSSPNAWDYSAWVRTYALFLEERLECFRVLKYDIEADRPR-------------- 170

Query: 55  XXXXXXXXXXXIVIRSTPVRDMKLEQIFSKMQHLQLLLERFLACRP 100
                              +D+   ++  ++  LQ LL R + C+P
Sbjct: 171 ------------------TKDLDTAELLEQLPALQQLLNRVIGCQP 198


>Glyma04g26430.1 
          Length = 204

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 1   MSDFRDNSKTGAWDFSAFVRTYSLYLDERLEYKMQSRRGKRGVVAYXXXXXXXXXXXXXX 60
           MS+F+D++ + + D   FVR YSLY D ++++    R+   GVV                
Sbjct: 57  MSNFKDDAHSNSSDQVGFVRVYSLYHDAKVDFVAYRRKLSNGVVESVEFRDEFGFVERER 116

Query: 61  XXXXXIVIRSTPVRDMKLEQIFSKMQHLQLLLERFLACRPT 101
                     TPVR+M  E++  ++  L  +L+R L CRP+
Sbjct: 117 ERNEV-----TPVREMGDERVLKRLNRLLWMLDRVLGCRPS 152


>Glyma10g05200.1 
          Length = 200

 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 7/102 (6%)

Query: 1   MSDFRDNSKTGAWDFSAFVRTYSLYLDERLEYKMQSRRGKRGVVAYXXXXXXXXXXXXXX 60
           MS+ RDN  + + +   FV+ YSLYLD ++++    R+   GVV                
Sbjct: 56  MSNLRDNMPSNSSNQVGFVKVYSLYLDVKVDFVAYRRKLSDGVVESVEFRDKFGSAERGR 115

Query: 61  XXXXXIVIRSTPVRDMKLEQIFSKMQHLQLLLERFLACRPTG 102
                     T VR+M  E++  ++  L  +L+R L CRP+G
Sbjct: 116 NEV-------TLVREMGAERVLKRLNCLLRMLDRVLGCRPSG 150