Miyakogusa Predicted Gene

Lj6g3v2171960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2171960.1 Non Chatacterized Hit- tr|Q9FGE8|Q9FGE8_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,47.15,2e-19,seg,NULL,CUFF.60743.1
         (158 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g32700.1                                                       167   6e-42
Glyma15g06620.1                                                       164   4e-41

>Glyma13g32700.1 
          Length = 160

 Score =  167 bits (422), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 91/164 (55%), Positives = 111/164 (67%), Gaps = 10/164 (6%)

Query: 1   MALKIYQIPTLF---TNSPVTLFITRHNLTTR-ISCSGSG--GISDXXXXXXXXXXXTRI 54
           MAL+I+ I   F   T SPV L  + H LT R I+C+G G  GI+D            R+
Sbjct: 1   MALRIHVISPFFSISTTSPVAL--STHKLTIRRINCTGGGEGGINDASLASELAARAARM 58

Query: 55  NARAVLAEDAMRKSRKILFRELCEYLGLKEDEARENWSKMGEDEKLVLVKGFVAEWGSCF 114
           NA +V+AE+AMRKSRK+LF ELCEY+GL ED+A+  W+ M +DEKLVLVK F+AEWGS F
Sbjct: 59  NAHSVMAEEAMRKSRKLLFGELCEYMGLDEDQAQHKWTYMDDDEKLVLVKAFLAEWGSHF 118

Query: 115 HPLSARSTKQMVEEYLNAPPPNSPHSDTSSSALFPGFKRIIGFP 158
           HPLSARSTK+M+EEYL     NSP   T+S   F G  RIIGFP
Sbjct: 119 HPLSARSTKEMLEEYLRQ--GNSPPKLTNSPFFFEGLNRIIGFP 160


>Glyma15g06620.1 
          Length = 155

 Score =  164 bits (415), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 90/163 (55%), Positives = 106/163 (65%), Gaps = 13/163 (7%)

Query: 1   MALKIYQIPTLF---TNSPVTLFITRHNLTTRISCS--GSGGISDXXXXXXXXXXXTRIN 55
           MAL+I+ I   F   T SPV L       + RISC+  G GGISD            R+N
Sbjct: 1   MALRIHVISPFFSISTTSPVAL------SSRRISCTAAGDGGISDAALASELAARAARMN 54

Query: 56  ARAVLAEDAMRKSRKILFRELCEYLGLKEDEARENWSKMGEDEKLVLVKGFVAEWGSCFH 115
           A A  AE+AMRKSRK+LF ELCEY+GL ED+A+  WS M +D+K VLVKGF+ EWGS FH
Sbjct: 55  AHAAKAEEAMRKSRKLLFGELCEYMGLDEDQAQHKWSNMDDDQKCVLVKGFLKEWGSHFH 114

Query: 116 PLSARSTKQMVEEYLNAPPPNSPHSDTSSSALFPGFKRIIGFP 158
           PLSARSTK+M+EEYL     NSP   T+SS  F G  RIIGFP
Sbjct: 115 PLSARSTKEMLEEYLRQ--GNSPPKPTNSSFFFEGLNRIIGFP 155