Miyakogusa Predicted Gene
- Lj6g3v2171770.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2171770.2 tr|A9SDH9|A9SDH9_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_211137,53.42,0.00000000000002,seg,NULL;
coiled-coil,NULL,CUFF.60795.2
(294 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g32590.1 286 2e-77
Glyma15g06740.1 277 8e-75
Glyma04g17690.1 58 1e-08
Glyma07g35650.1 58 1e-08
>Glyma13g32590.1
Length = 295
Score = 286 bits (731), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 158/240 (65%), Positives = 181/240 (75%), Gaps = 15/240 (6%)
Query: 1 MDLESENXXXXXXXXXXXXXXXQAEKEGVLAYLSKPNVRNRPNSRFLTATVLGVQQSNRV 60
MDLE+EN Q+E+EGVLAYL KPN+ RPNSRFLTATV GVQQ+NR
Sbjct: 1 MDLETENRLAAMLMREAAELRRQSEREGVLAYLRKPNIHTRPNSRFLTATVRGVQQANRA 60
Query: 61 VEVNEMWRVRQKEKELDERVRGTSSDKSSGDRSHRDDKTSRSS-----IGNSTRTS-ASC 114
VEVNEMWR+RQKE ELD+ V+ + S DRSHRDDK+SR + I NSTRTS ASC
Sbjct: 61 VEVNEMWRLRQKELELDKWVK-----EKSIDRSHRDDKSSRGTGRHADIDNSTRTSSASC 115
Query: 115 SSKRQFEME--VKDTSKDKNSSDRSHRDSKLLGRTGRHAVIDESTSASASCLNKRGHEHP 172
SSKR++E+E VKDTSKD +SS+RSHRD GRHAV+D+ST A S ++R HEH
Sbjct: 116 SSKREYELERWVKDTSKDNSSSERSHRDGNSSRSPGRHAVVDKSTIAYTSSSSERAHEHG 175
Query: 173 PEGLKDEELEEFLHSRTKRGRGAVGPRMDETGPYLPPHTDGEPSTSPDARERRRVIYGPE 232
EGLKD+ELEEFLHSRTKRGRGAVGPRMDETGPYL PH+D EP+TSPD RE RRVIYGPE
Sbjct: 176 LEGLKDDELEEFLHSRTKRGRGAVGPRMDETGPYL-PHSDREPNTSPDVRE-RRVIYGPE 233
>Glyma15g06740.1
Length = 300
Score = 277 bits (709), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 159/242 (65%), Positives = 182/242 (75%), Gaps = 10/242 (4%)
Query: 1 MDLESENXXXXXXXXXXXXXXXQAEKEGVLAYLSKPNVRNRPNSRFLTATVLGVQQSNRV 60
MDLE+EN Q+E+EGVLAYL KPN+R RPNSRFLTATV GVQQ+NR
Sbjct: 1 MDLETENRLAAMLMREAAELRRQSEREGVLAYLRKPNIRTRPNSRFLTATVRGVQQANRA 60
Query: 61 VEVNEMWRVRQKEKELDERVRGTSSDKSSGDRSHRDDKTSR-----SSIGNSTRTSASCS 115
VEVNEMWR+RQKE ELD+RV+ S KSS DRSH DD +SR +SI NST TS+S
Sbjct: 61 VEVNEMWRLRQKELELDKRVKEKSLGKSSRDRSHGDDNSSRGTGRHASIDNSTSTSSSSR 120
Query: 116 S-KRQFEME--VKDTSKDKNSSDRSHRDSKLLGRTGRHAVIDESTSASASCLNKRGHEHP 172
S KR++E++ VKDTSKDK+S DRS+R GRHA +D+STSA ASC ++R +EH
Sbjct: 121 SGKREYELDKWVKDTSKDKSSGDRSYRAGNSSRSAGRHAAVDKSTSAHASCSSEREYEHG 180
Query: 173 PEGLKDEELEEFLHSRTKRGRGAVGPRMDETGPYLPPHTDGEPSTSPDARERRRVIYGPE 232
EGLKDEELEEFLHSRTKRGRGAVGPRMDETGPYL PH +GEPSTSPD RE RVIYGPE
Sbjct: 181 LEGLKDEELEEFLHSRTKRGRGAVGPRMDETGPYL-PHLEGEPSTSPDVRE-HRVIYGPE 238
Query: 233 MP 234
P
Sbjct: 239 KP 240
>Glyma04g17690.1
Length = 53
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 33/53 (62%)
Query: 1 MDLESENXXXXXXXXXXXXXXXQAEKEGVLAYLSKPNVRNRPNSRFLTATVLG 53
MDLE+EN Q+++EGVLAYL KPN+R RPNS FL ATV G
Sbjct: 1 MDLETENRLAAMLMREVAELRRQSKREGVLAYLRKPNIRTRPNSCFLIATVRG 53
>Glyma07g35650.1
Length = 53
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 32/53 (60%)
Query: 1 MDLESENXXXXXXXXXXXXXXXQAEKEGVLAYLSKPNVRNRPNSRFLTATVLG 53
MDLE EN Q+E+EGV+AYL KPNVR RPNS FL AT+ G
Sbjct: 1 MDLEMENRLAAMLMREVAELRWQSEREGVMAYLRKPNVRTRPNSCFLAATIRG 53