Miyakogusa Predicted Gene

Lj6g3v2156530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2156530.1 tr|G6FXY1|G6FXY1_9CYAN Photosystem II oxygen
evolving complex protein PsbP (Precursor)
OS=Fischerell,36.03,0.0000000001,PsbP,Photosystem II PsbP, oxygen
evolving complex; no description,Mog1/PsbP, alpha/beta/alpha
sandwi,CUFF.60711.1
         (170 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g38960.1                                                       253   8e-68
Glyma19g41510.1                                                       224   3e-59
Glyma20g23100.1                                                        50   1e-06
Glyma10g43690.1                                                        49   2e-06

>Glyma03g38960.1 
          Length = 258

 Score =  253 bits (645), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 120/143 (83%), Positives = 130/143 (90%)

Query: 16  KAFAVPRRKAMSLILSSCILSKVGLAFAQQPPVFREYVDTFDGYSFKYPGNWIQVRGAGA 75
           KAFAVPRRKA+SLILSS  LS+ GLA AQQ PVFREY+D FDGYSF+YPG+WIQVRGAGA
Sbjct: 45  KAFAVPRRKALSLILSSYFLSEAGLALAQQSPVFREYIDAFDGYSFQYPGSWIQVRGAGA 104

Query: 76  DIFFRDPYILDENLSLEIXXXXXXQYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRRE 135
           DIFFRDP++LDENLSLEI      QYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRRE
Sbjct: 105 DIFFRDPFVLDENLSLEISSPSSSQYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRRE 164

Query: 136 ANVLSTSSRVADDGKLYYQVEVG 158
           +N+LSTSSRVADDG+LYYQVEV 
Sbjct: 165 SNILSTSSRVADDGRLYYQVEVN 187


>Glyma19g41510.1 
          Length = 191

 Score =  224 bits (572), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 109/141 (77%), Positives = 121/141 (85%), Gaps = 12/141 (8%)

Query: 18  FAVPRRKAMSLILSSCILSKVGLAFAQQPPVFREYVDTFDGYSFKYPGNWIQVRGAGADI 77
           FAVPRRKAMSLILSS +LS+VGLA AQQ PVFREY+D FDG SF+YPG+WIQVRGAGADI
Sbjct: 1   FAVPRRKAMSLILSSYVLSEVGLALAQQSPVFREYIDAFDGCSFQYPGSWIQVRGAGADI 60

Query: 78  FFRDPYILDENLSLEIXXXXXXQYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRREAN 137
           FFRDP++LDENLS            +VEDLG PQEAGKKVLKQYLTEFMSTRLGVRRE+N
Sbjct: 61  FFRDPFVLDENLS------------NVEDLGAPQEAGKKVLKQYLTEFMSTRLGVRRESN 108

Query: 138 VLSTSSRVADDGKLYYQVEVG 158
           +LSTSSRV DDG+LYYQ+EV 
Sbjct: 109 ILSTSSRVTDDGRLYYQIEVN 129


>Glyma20g23100.1 
          Length = 234

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 12/123 (9%)

Query: 35  LSKVGLAFAQQPP-VFREYVDTFDGYSFKYPGNWIQVRGAGADIFFRDPYILDENLSLEI 93
           L    L FAQ+ P  +R +VD  DGYS+ YP +W +      D  F+D Y+  +N+ +  
Sbjct: 69  LQPTNLVFAQEKPDRYRAFVDYEDGYSYVYPIDWKEFDFRAHDSAFKDRYLQLQNVRVRF 128

Query: 94  XXXXXXQYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRREANVLSTSSRVADDGKLYY 153
                 + K + DLGP +E    ++K         R     +   ++       DGK YY
Sbjct: 129 ---IPTEKKDIRDLGPMEEVIYDLVKH--------RYAAPNQRPTINDMQEKTIDGKHYY 177

Query: 154 QVE 156
             E
Sbjct: 178 TFE 180


>Glyma10g43690.1 
          Length = 234

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 12/123 (9%)

Query: 35  LSKVGLAFAQQPP-VFREYVDTFDGYSFKYPGNWIQVRGAGADIFFRDPYILDENLSLEI 93
           L  + L FAQ+ P  +R +VD  DGYS+ YP +W +      D  F+D Y+  +N+ +  
Sbjct: 69  LQPINLVFAQEKPDRYRAFVDYEDGYSYVYPIDWKEFDFRAHDSAFKDRYLQLQNVRVRF 128

Query: 94  XXXXXXQYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRREANVLSTSSRVADDGKLYY 153
                 + K + +LGP +E    ++K         R     +   ++       DGK YY
Sbjct: 129 ---IPTEKKDIRELGPMEEVVYDLVKH--------RYAAPNQRPTINDMQEKTIDGKHYY 177

Query: 154 QVE 156
             E
Sbjct: 178 TFE 180