Miyakogusa Predicted Gene

Lj6g3v2134250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2134250.1 CUFF.60701.1
         (353 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g06980.1                                                       216   3e-56
Glyma13g32340.1                                                       188   6e-48
Glyma13g05630.1                                                        52   1e-06

>Glyma15g06980.1 
          Length = 309

 Score =  216 bits (550), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 177/321 (55%), Gaps = 50/321 (15%)

Query: 5   YNSANSGSEYGEYNFNSYAVNYDYA--PQVPPFMNYNSHEYNQVNQPYYGYDQSLCFAPN 62
           Y+SA SGS+YGEYN NSYA+NYDYA  P  P ++       N +      Y   L     
Sbjct: 5   YSSAYSGSDYGEYNLNSYALNYDYAQTPSYPIWLILAMTTINHIMDMILVYIMLLITLLK 64

Query: 63  YYPDQCYQRVSYSATNFSEPKSLVYDPNYGMSQLVISYSKLEFNEPEFEEYDPTPYGGGY 122
                                  +  P   + Q +++ +        F++YDPTPYGGGY
Sbjct: 65  -----------------------IAKPYLTLPQCIVTQNLFCMIPITFDDYDPTPYGGGY 101

Query: 123 DIVETYGKPLPPSDKICHPRSDGPSSNSIIPLDTVP-AVSIVPLPTVKEGIDEKAIIPQN 181
           DI +TYGK LPPSDKIC+PRS+        P+   P + SIVPLPT++EGI+EKAI PQN
Sbjct: 102 DIDQTYGKALPPSDKICYPRSESS------PITEPPFSESIVPLPTIEEGIEEKAITPQN 155

Query: 182 GTAGQM-LEDKPQSQDIISTDQPKEVENNRHVTFDLKAXXXXXXXXXXXXXXXXXXXXCN 240
           G   Q   E+KPQSQD    DQPKEVE+N   T                          +
Sbjct: 156 GAIVQTKTEEKPQSQD-SGKDQPKEVEDNNFNT--------ESEGSHQEDDNYSESGIVS 206

Query: 241 GYSGVQYDEHEKQ-VPL--QYPSGYGLETVDICESLFGNWPCLSRMKRE----QQQALGG 293
           G+    Y EHEKQ VP+  QYPSGYGLE +DICESLFG WPCL RMK+     ++ +  G
Sbjct: 207 GFIE-GYKEHEKQVVPVVPQYPSGYGLEAMDICESLFGYWPCLERMKKRECCCEEVSYRG 265

Query: 294 NNCQDNMWQGTADYLFGNPYP 314
           NNCQ+NMWQGTA YLFG+P P
Sbjct: 266 NNCQENMWQGTAGYLFGSPNP 286


>Glyma13g32340.1 
          Length = 290

 Score =  188 bits (478), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 106/143 (74%), Positives = 120/143 (83%), Gaps = 6/143 (4%)

Query: 4   YYNSANSGSE-YGEYNFNSYAVNYDYAPQVPPFMNYNSHEYNQVNQPYYGYDQSLCFAPN 62
           YY+SA SGSE YGEYNFNSYA+NYDYA Q+P +M Y S+EYNQ NQPYYGYD SL +APN
Sbjct: 3   YYSSAYSGSENYGEYNFNSYALNYDYA-QIPSYMAYTSYEYNQ-NQPYYGYDSSLYYAPN 60

Query: 63  YYPDQCYQR--VSYSATNFSEPKSLVYDPNYGMSQLVISYSKLEFNEPEFEEYDPTPYGG 120
           Y P + YQ    SYSAT +S+PKS+VY PN GMSQLVISYSK EFN PEF++YDPTPYGG
Sbjct: 61  Y-PAETYQTQTTSYSATTYSDPKSVVYVPNNGMSQLVISYSKAEFNVPEFDDYDPTPYGG 119

Query: 121 GYDIVETYGKPLPPSDKICHPRS 143
           GYDI +TYGK LPPSDKIC+PRS
Sbjct: 120 GYDIDQTYGKALPPSDKICYPRS 142



 Score =  135 bits (341), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 74/122 (60%), Positives = 88/122 (72%), Gaps = 14/122 (11%)

Query: 241 GYSGVQ-YDEHEKQV-PL--QYPSGYGLETVDICESLFGNWPCLSRMKRE-----QQQAL 291
           GY+G Q YDEHEKQV P+  QYPSGYGLE +DICESLFG WPCL RMK++     ++ + 
Sbjct: 174 GYNGGQGYDEHEKQVVPVVPQYPSGYGLEAMDICESLFGYWPCLDRMKKKRECCCEEVSY 233

Query: 292 GGNNCQDNMWQGTADYLFGNPYPXXXXXXXXXXXXXNLVYGYERHYPSQAQCWQIDYTDK 351
            GNNCQ+NMWQGTADYLFG+P P             ++VYGY+RH+P QAQ  QIDYTD 
Sbjct: 234 RGNNCQENMWQGTADYLFGSPNP-----YGGSGYGGDVVYGYQRHHPMQAQYKQIDYTDG 288

Query: 352 SW 353
           SW
Sbjct: 289 SW 290


>Glyma13g05630.1 
          Length = 388

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/27 (74%), Positives = 24/27 (88%)

Query: 115 PTPYGGGYDIVETYGKPLPPSDKICHP 141
           PTPYGGGYDI  TYG+P+PPSD+ C+P
Sbjct: 22  PTPYGGGYDIALTYGRPIPPSDETCYP 48