Miyakogusa Predicted Gene

Lj6g3v2083610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2083610.1 Non Chatacterized Hit- tr|G7I3G5|G7I3G5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,84.21,2e-19,Pcc1,EKC/KEOPS complex, subunit
Pcc1,CUFF.60650.1
         (95 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g17990.1                                                       152   7e-38
Glyma17g29540.1                                                       143   4e-35
Glyma14g16690.1                                                       125   2e-29
Glyma14g16960.1                                                       123   4e-29

>Glyma11g17990.1 
          Length = 91

 Score =  152 bits (384), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 76/89 (85%), Positives = 80/89 (89%)

Query: 7  TKCQWDFSCGLEVDFGSEENASIAYAALAVDKELQPDKVKRLMTVSDGKLSVRFEATEAR 66
          T  QW+FSC +E+ FGSEENASI YAALAVDKELQPDKVKRLMTVSDGKLSV FEATEAR
Sbjct: 3  TPPQWEFSCDMEMYFGSEENASIVYAALAVDKELQPDKVKRLMTVSDGKLSVHFEATEAR 62

Query: 67 FLRASFSAFVDVLILATKTIEEFGPGMEL 95
          FLRASFSAFVDVL LATKTIEEFG  M+L
Sbjct: 63 FLRASFSAFVDVLTLATKTIEEFGQVMKL 91


>Glyma17g29540.1 
          Length = 89

 Score =  143 bits (361), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 74/89 (83%), Positives = 78/89 (87%), Gaps = 2/89 (2%)

Query: 7  TKCQWDFSCGLEVDFGSEENASIAYAALAVDKELQPDKVKRLMTVSDGKLSVRFEATEAR 66
          T  QW+FSC +E+ FGSEENASI YAALAVDKE  PDKVKRLMTVSDGKLSV FEATEAR
Sbjct: 3  TPPQWEFSCDMEMYFGSEENASIVYAALAVDKE--PDKVKRLMTVSDGKLSVHFEATEAR 60

Query: 67 FLRASFSAFVDVLILATKTIEEFGPGMEL 95
          FLRASFSAFVDVL LATKTIEEFG  M+L
Sbjct: 61 FLRASFSAFVDVLTLATKTIEEFGQVMKL 89


>Glyma14g16690.1 
          Length = 73

 Score =  125 bits (313), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/79 (82%), Positives = 68/79 (86%), Gaps = 7/79 (8%)

Query: 17 LEVDFGSEENASIAYAALAVDKELQPDKVKRLMTVSDGKLSVRFEATEARFLRASFSAFV 76
          +E+DFGSEENASI YAALAVDKELQPDKVKRLMTV        FEATEARFLRASFSAFV
Sbjct: 2  MEMDFGSEENASIVYAALAVDKELQPDKVKRLMTV-------HFEATEARFLRASFSAFV 54

Query: 77 DVLILATKTIEEFGPGMEL 95
          DVL LATKTIEEFG GM+L
Sbjct: 55 DVLTLATKTIEEFGQGMKL 73


>Glyma14g16960.1 
          Length = 73

 Score =  123 bits (309), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 64/79 (81%), Positives = 68/79 (86%), Gaps = 7/79 (8%)

Query: 17 LEVDFGSEENASIAYAALAVDKELQPDKVKRLMTVSDGKLSVRFEATEARFLRASFSAFV 76
          +E+DFGSEENASI YAALAVDKELQPDKVKRLMT       V FEAT+ARFLRASFSAFV
Sbjct: 2  MEMDFGSEENASIVYAALAVDKELQPDKVKRLMT-------VHFEATKARFLRASFSAFV 54

Query: 77 DVLILATKTIEEFGPGMEL 95
          DVL LATKTIEEFG GM+L
Sbjct: 55 DVLTLATKTIEEFGQGMKL 73