Miyakogusa Predicted Gene
- Lj6g3v2078010.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2078010.1 Non Chatacterized Hit- tr|C4J007|C4J007_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,31.03,3e-18,SUBFAMILY
NOT NAMED,NULL; FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS,NULL;
Bromodomain,Bromodomain,CUFF.60618.1
(477 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g31800.1 649 0.0
Glyma15g07500.1 633 0.0
Glyma07g31120.1 452 e-127
Glyma13g25380.1 427 e-119
Glyma15g42440.1 112 8e-25
Glyma08g15870.1 79 1e-14
>Glyma13g31800.1
Length = 455
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/472 (70%), Positives = 370/472 (78%), Gaps = 26/472 (5%)
Query: 8 GKWGTWEELILGAAVLRHGTQDWKVVAGELRVRTPCPDAFTPENCEAKYEEFLKRYSGST 67
G+WGTWEEL+LG AVLR+G ++WKVVA ELR RT CP TPE C+AKYE+ KRYSG+
Sbjct: 7 GRWGTWEELLLGGAVLRYGARNWKVVAAELRARTVCPYIITPEVCKAKYEDLQKRYSGNK 66
Query: 68 AWYEELKKARIAELKRALEQSDKKIGALESKLESLKAEKNEKIDDRHVENGSGSPASHEP 127
AW+EEL+K R+AELKRALE S+ IG+LESKLESLKA KNEK DDR+V+ GS P H
Sbjct: 67 AWFEELRKTRVAELKRALEVSEDSIGSLESKLESLKAGKNEKKDDRYVDKGSARPKLHVA 126
Query: 128 SQKLERVESSNKELSKDGLSAGSFTHETRTTNWSPERQVPA---EDTETKPEASHSSEQV 184
SQKLERVESS KE SKDGLSAGSFTHETR TNWSPE VPA ED ETKPE SHS+EQ
Sbjct: 127 SQKLERVESSTKETSKDGLSAGSFTHETR-TNWSPECPVPARSVEDMETKPEVSHSTEQA 185
Query: 185 KVLNVDNLTHTIYEGQVGSLTTXXXXXXXXDCGRNIKEAASMGESDLLDSADVVSLCKES 244
KVLNVDN HTIYEGQ GSL DCGRN+KE AS+GESDLLDSAD+VS CKES
Sbjct: 186 KVLNVDNRAHTIYEGQGGSLKKRRGKRKRKDCGRNMKE-ASVGESDLLDSADIVSWCKES 244
Query: 245 STSNYDEVAKSSGVDDQIKNLKKTGAGEIMEMLDSIFETQGASAFRRRLDSQKRGKYKKM 304
STSNY DQ +NLKK ++ME+LD IFET+GA AFRRRLDSQKRG+YKKM
Sbjct: 245 STSNY----------DQNRNLKKDRVEDMMEILDFIFETKGAPAFRRRLDSQKRGRYKKM 294
Query: 305 IRRHMDFDTIRSRISDKTIKSARELFRDLLLLANNALVFYSKSTRVYKSAMLLRDLVTKK 364
IR+HMDFDTIRSRIS +TIKS+ ELFRDLLLL NNALVFYSKSTR YK+ +LLR +VTKK
Sbjct: 295 IRQHMDFDTIRSRISSQTIKSSVELFRDLLLLTNNALVFYSKSTREYKTVLLLRGIVTKK 354
Query: 365 MRETSKGISSSKVTTTSEANESSKLPVQNPRVKPRSVRPGNRKIVAKATGGNNSASGVSD 424
M+ET K N KLPV NP VKPRSVRPGNRKIVAKA GGNNSASGVS
Sbjct: 355 MKETLKA-----------TNVPIKLPVHNPHVKPRSVRPGNRKIVAKAVGGNNSASGVSH 403
Query: 425 GAKKPCKVDSPSPVESLTVKKKAFGRPKKVGRGTAGPKPATPLKGKKRVRTK 476
G KKP KV+SPS VESLTVKKK FGRPKKVGRG AG +PA P+KGKKRVRTK
Sbjct: 404 GTKKPSKVESPSSVESLTVKKKGFGRPKKVGRGAAGQRPAMPMKGKKRVRTK 455
>Glyma15g07500.1
Length = 460
Score = 633 bits (1633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/480 (69%), Positives = 372/480 (77%), Gaps = 24/480 (5%)
Query: 1 MGTEEGNGKWGTWEELILGAAVLRHGTQDWKVVAGELRVRTPCPDAFTPENCEAKYEEFL 60
MGTE G+WGTWEEL+LG AVLR+GT++W VVA ELR RT CP TPE C+AKYE+
Sbjct: 1 MGTEV-MGRWGTWEELLLGGAVLRYGTRNWNVVAAELRARTACPYTITPEVCKAKYEDLQ 59
Query: 61 KRYSGSTAWYEELKKARIAELKRALEQSDKKIGALESKLESLKAEKNEKIDDRHVENGSG 120
+RY+G+ AW+EEL+K R+AELKRALE S+ IG+LESKLESL+A KNEK DD HV+ GS
Sbjct: 60 QRYTGNKAWFEELRKTRVAELKRALELSEDSIGSLESKLESLEAGKNEKKDDCHVDKGSA 119
Query: 121 SPASHEPSQKLERVESSNKELSKDGLSAGSFTHETRTTNWSPERQVP---AEDTETKPEA 177
P H SQKLERVESS KE SKDGLSAGSFTHETR TNWSPE VP AED ETKPE
Sbjct: 120 GPKLHVASQKLERVESSTKETSKDGLSAGSFTHETR-TNWSPECPVPAGFAEDMETKPEV 178
Query: 178 SHSSEQVKVLNVDNLTHTIYEGQVGSLTTXXXXXXXXDCGRNIKEAASMGESDLLDSADV 237
SHS+EQ KVLNVD LT TIYEGQ GS DCGRN+KE AS+GESDLLDSADV
Sbjct: 179 SHSTEQAKVLNVDELTRTIYEGQGGSFKKRRGKRKRKDCGRNMKE-ASVGESDLLDSADV 237
Query: 238 VSLCKESSTSNYDEVAKSSGVDDQIKNLKKTGAGEIMEMLDSIFETQGASAFRRRLDSQK 297
VS CKESSTSN EVAKS ++ME+LD IFET+GASAF+RRLDSQK
Sbjct: 238 VSWCKESSTSNCGEVAKSC---------------DMMEILDFIFETKGASAFQRRLDSQK 282
Query: 298 RGKYKKMIRRHMDFDTIRSRISDKTIKSARELFRDLLLLANNALVFYSKSTRVYKSAMLL 357
RG+YKKMI +HMDFDTIRSRIS +TIKS+ ELFRDLLLL NNALVFYSKSTR YK+A+LL
Sbjct: 283 RGRYKKMILQHMDFDTIRSRISSQTIKSSVELFRDLLLLTNNALVFYSKSTREYKTALLL 342
Query: 358 RDLVTKKMRETSKGISSSKVTTTSEANESSKLPVQNPRVKPRSVRPGNRKIVAKATGGNN 417
R +VTKKMRE+ KG S+ TT N KL V NP VKPRSVRPGNRKIVAKA GG N
Sbjct: 343 RGIVTKKMRESLKGTSNK--ATTQATNFPIKLLVHNPHVKPRSVRPGNRKIVAKAVGGKN 400
Query: 418 SASGVSDGAKKPCKVDSPSPVESLTVKKKAFGRPKKVGRG-TAGPKPATPLKGKKRVRTK 476
SASG S G KKP KVDSPS VESLT+KKK FGRPKKVGRG AG +PA P+KGKKRVRTK
Sbjct: 401 SASGESHGTKKPSKVDSPSSVESLTMKKKGFGRPKKVGRGAAAGQRPAMPMKGKKRVRTK 460
>Glyma07g31120.1
Length = 464
Score = 452 bits (1163), Expect = e-127, Method: Compositional matrix adjust.
Identities = 269/476 (56%), Positives = 332/476 (69%), Gaps = 24/476 (5%)
Query: 10 WGTWEELILGAAVLRHGTQDWKVVAGELRVRTPCPDAFTPENCEAKYEEFLKRY-SGSTA 68
W TW+EL+LG AV RHG +DW V+A EL+ RT P FTPE C+AKY E ++Y G T+
Sbjct: 4 WSTWQELLLGGAVSRHGIRDWTVIAAELKTRTVSPCIFTPEVCKAKYVELQQQYPGGCTS 63
Query: 69 WYEELKKARIAELKRALEQSDKKIGALESKLESLKAEKNEKIDDRHVENGSGSPASHEPS 128
W+EELKK R+AELK+ LE S++ IG+LESKLE+L+A ++EK DD HV+NGS P H PS
Sbjct: 64 WFEELKKKRVAELKKDLELSEEVIGSLESKLETLQAGRDEKRDDCHVDNGSAEPELHVPS 123
Query: 129 QKLERVESSNKELSKDGLSAGSFTHETRTTNWSPERQVPAEDTE---TKPEASHSSEQVK 185
QKL+RV++S KE+SKDGLSAGSFTHET+T NW+ E QVPA E TKPE S S+EQ K
Sbjct: 124 QKLDRVDTSAKEMSKDGLSAGSFTHETKT-NWTHECQVPATSCEYVRTKPEVSASTEQEK 182
Query: 186 VLNVDNLTHTIYEGQVGSLTTXXXXXXXXDCGRNIKEAASMGESDLLDSADVVSLCKESS 245
VLNVD THT+YEGQ G L DCGR+I E S ESD SADV CKESS
Sbjct: 183 VLNVDKSTHTVYEGQGGCLKKPRGKRKRKDCGRSINEV-SARESDF--SADV---CKESS 236
Query: 246 TSNYDEVAKSSGVDDQIKNLKKTGAGEIMEMLDSIFETQGASAFRRRLDSQKRGKYKKMI 305
SN E+ KSSG++++ NLKK G ++ME+LDS QGASAF + DSQKRGKY+++I
Sbjct: 237 ISNCGEIVKSSGMNEENANLKKAGIKDLMEVLDSFLTVQGASAFSYKHDSQKRGKYEQLI 296
Query: 306 RRHMDFDTIRSRISDKTIKSARELFRDLLLLANNALVFYSKSTRVYKSAMLLRDLVTKKM 365
R+HMDF+TI+SRI + TIKS EL RDLLLL+NNAL FYSK+TR YK+A+ LRDLV K +
Sbjct: 297 RQHMDFETIKSRICNGTIKSVVELLRDLLLLSNNALAFYSKNTREYKTALQLRDLVIKTL 356
Query: 366 RETSKGISSSKVTTTSEANESSKLP----VQNPRVKPRSVRPGNRKIVAKATGGNNSASG 421
E + S+S V S S+ + V +P V+ RS+RPGNRKIVAK +A
Sbjct: 357 TEKLECASTSPVCDPSAKVRSTSICSTSLVHDPSVQVRSMRPGNRKIVAKV-----AAER 411
Query: 422 VSDGAKKPCKVDSPSPVESLTVKKKAF-GRPKKVGRGTAGPKPATPLKGKKRVRTK 476
VS KK KV+SP VES+ KKAF GR KKVGR +AG + ATP +KR R K
Sbjct: 412 VSAAVKKANKVESPPSVESV---KKAFGGRAKKVGRESAGKRNATPRNERKRRRAK 464
>Glyma13g25380.1
Length = 495
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 257/499 (51%), Positives = 329/499 (65%), Gaps = 37/499 (7%)
Query: 4 EEGNGKWGTWEELILGAAVLRHGTQDWKVVAGELRVRTPCPDAFTPENCEAKYEEFLKRY 63
EE W TWEEL+LG A+ RHGT+DW V+A EL+ RT P FTPE C+AKYEE +Y
Sbjct: 3 EETMVTWSTWEELLLGGAISRHGTRDWTVIAAELKTRTVSPCIFTPEVCKAKYEELNFQY 62
Query: 64 -SGSTAWYEELKKARIAELKRALEQSDKKIGALESKLESLKAEKNEKIDDRHVENGSGSP 122
G T+W+EELKK R+AELKR L+QS++ IG+LE K+E+LKA ++EK DD HV+NGS P
Sbjct: 63 PGGCTSWFEELKKKRVAELKRDLKQSEEVIGSLEMKIETLKAGRDEKRDDCHVDNGSAEP 122
Query: 123 ASHEPSQKLERVESSNKELSKDGLSAGSFTHETRTTNWSPERQVPA---EDTETKPEASH 179
+ PS KL+RV S KE+SKDGLSAGSFTHET+T NW+ E Q+PA ED TKPEAS
Sbjct: 123 ELNVPSHKLDRVNDSPKEMSKDGLSAGSFTHETKT-NWTHECQIPATSCEDVATKPEASG 181
Query: 180 SSEQVKVLNVDNLTHTIYEGQVGSLTTXXXXXXXXDCGRNIKEAASMGESDLLDSADVVS 239
S+EQ KVLNVD L + +Y+ G L DC R+I E S+ ESD SADV
Sbjct: 182 STEQEKVLNVDKLANIVYQEHGGCLKKPRGKRKRKDCSRSINEV-SVRESDF--SADV-- 236
Query: 240 LCKESSTSNYDEVAKSSGVDDQIKNLKKTGAGEIMEMLDSIFETQGASAFRRRLDSQKRG 299
CKESS S E+ KSSGV+++ NLK G ++ME+LDS QGAS F + D+QK+G
Sbjct: 237 -CKESSLSYCGEIVKSSGVNEENANLKTAGIKDLMELLDSFLVVQGASVFTYKHDNQKQG 295
Query: 300 KYKKMIRRHMDFDTIRSRISDKTIKSARELFRDLLLLANNALVFYSKSTRVYKSAMLLRD 359
+Y+K+IR+H+DFDTI+SRI + TIKS EL RDLLLL+NNALVFYSK+TR +K+ + LRD
Sbjct: 296 RYEKLIRQHVDFDTIKSRIHNGTIKSVVELLRDLLLLSNNALVFYSKNTREHKTGLQLRD 355
Query: 360 LVTKKMRETSKGISSSKV-----------TTTSEANESSKL--------PVQNPRVKPRS 400
LV K + E + S+S V ++TS +SS PV++ VK RS
Sbjct: 356 LVIKTLTEKLESSSTSPVGDPSVNVISTRSSTSYLRDSSARVRSMPSTSPVRDSSVKVRS 415
Query: 401 VRPGNRKIVAKATGGNNSASGVSDGAKKPCKVDSPSPVESLTVKKKAF------GRPKKV 454
+RPGNRKIVAK GG++SA V GAKK KVD+ P E ++ K GR + V
Sbjct: 416 MRPGNRKIVAKVAGGSSSAERVLVGAKKANKVDTI-PAERVSAAVKKANKKACGGRTRTV 474
Query: 455 GRGTAGPKPATPLKGKKRV 473
G +A + ATP +KR+
Sbjct: 475 GHESAVKRNATPRNDRKRI 493
>Glyma15g42440.1
Length = 655
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 180/408 (44%), Gaps = 68/408 (16%)
Query: 7 NGKWGTWEELILGAAVLRHGTQDWKVVAGELRVRTPCPDAFTPENCEAKYEEFLKRYS-- 64
N WGTWEEL+L AV RHG +DW VA E++ RT A T +CE K+++ +R++
Sbjct: 33 NEVWGTWEELLLACAVNRHGFKDWDAVAMEVQSRTTRLLA-TAHHCEQKFDDLSRRFADQ 91
Query: 65 ------------GSTA------WYEELKKARIAELKRALEQSDKKIGALESKLESLKAEK 106
G+ A W +EL+K R+AEL+R +++SD I +L+ +++ L+ EK
Sbjct: 92 CNDDVPPSRQNGGAAAISDHVPWLDELRKLRVAELRREVQRSDVSILSLQLEVKRLEEEK 151
Query: 107 NEKIDDRHVENGSGSPASHEPSQKLERVESSNKELSKDGLSAGSFTHETRTTNWSPERQV 166
+ + + + EL + G E N PE +
Sbjct: 152 T---------------KEKDGKDDKKPDLAVSGELRPENDKTGGEVDEAGPANSEPEERT 196
Query: 167 PAEDTETKPE-ASHSSEQVKVLNVDNLTHTIYEG---------------QVGSLTTXXXX 210
+T P S + + +N N T + +E Q GS+
Sbjct: 197 ANNTDKTLPTMGDESDRENQSVNESNSTGSRFEKTGDGDAKAGTGPAPVQTGSIEPDPVL 256
Query: 211 XXXXDCGRNIKEAASMGESDLL------DSADV---VSLCKESSTSNYDEVAKSSGVDDQ 261
G+ + E ++ G D L +S++V SL ++ T EV+ G
Sbjct: 257 RK----GKPVGEESNNGSYDALAKGGTRESSEVQSSASLTRKRKTRRRKEVSGGGGASSP 312
Query: 262 IKN--LKKTGAGEIMEMLDSIFETQGASAFRRRLDSQKRGKYKKMIRRHMDFDTIRSRIS 319
+N L + ++ +L+ I + +S F RRL+SQ +YK ++++ MD +TI+ R+
Sbjct: 313 AENDELATVKSEPLVGVLELIKGHEHSSLFERRLESQDTDRYKDLVKQPMDLETIQLRLQ 372
Query: 320 DKTIKSARE-LFRDLLLLANNALVFYSKSTRVYKSAMLLRDLVTKKMR 366
S FRDLLLL NA VF+S T + L L T +M+
Sbjct: 373 KGHYSSCTSAFFRDLLLLFTNATVFFSHDTLESQVGRQLHRLATTEMK 420
>Glyma08g15870.1
Length = 689
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 21/122 (17%)
Query: 10 WGTWEELILGAAVLRHGTQDWKVVAGELRVRTPCPDAFTPENCEAKYEEFLKRYS----- 64
WGTWEEL+L AV RHG DW VA E++ RT A T +CE K+ + +R++
Sbjct: 33 WGTWEELLLACAVNRHGFTDWDAVAMEVQSRTTRLLA-TARHCEQKFHDLSRRFAVQCND 91
Query: 65 --------GSTA-------WYEELKKARIAELKRALEQSDKKIGALESKLESLKAEKNEK 109
G+ A W +EL+K R+AEL+R +++SD I +L+ +++ L+ EK ++
Sbjct: 92 DVPPPRQNGAAAAISDHVPWLDELRKLRVAELRRDVQRSDVSILSLQLEVKRLEEEKAQE 151
Query: 110 ID 111
D
Sbjct: 152 KD 153
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 273 IMEMLDSIFETQGASAFRRRLDSQK-RGKYKKMIRRHMDFDTIRSRISDKTIKSARE-LF 330
++ +L+ I + +S F RRLDSQ+ +YK ++++ MD +TI+ R+ S F
Sbjct: 297 LVGVLELIKGHEHSSLFERRLDSQQDTDRYKDLVKQPMDLETIQLRLQKGHYSSCTSAFF 356
Query: 331 RDLLLLANNALVFYSKSTRVYKSAMLLRDLVTKKMRETSKGISSSKVTTTSEANESSKLP 390
RDLLLL NA VF+S + ++ L L T +M+ + S N+S LP
Sbjct: 357 RDLLLLFTNATVFFSHDSLESQAGRQLHRLATAEMKNHGQAQSD----PIPRKNDS--LP 410
Query: 391 VQNPRVKPRSVRPGNR 406
P KP S+ N+
Sbjct: 411 PNAPLAKPDSLLSKNK 426