Miyakogusa Predicted Gene

Lj6g3v2055770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2055770.1 tr|B9N763|B9N763_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_785648 PE=4
SV=1,47.79,7e-19,seg,NULL,CUFF.60616.1
         (153 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g25320.1                                                       178   2e-45
Glyma15g07540.1                                                       177   5e-45
Glyma13g31750.1                                                       174   4e-44
Glyma06g45130.1                                                       121   3e-28
Glyma12g11860.1                                                       119   1e-27
Glyma07g31160.1                                                        89   2e-18
Glyma16g00450.2                                                        77   1e-14
Glyma16g00450.1                                                        77   1e-14
Glyma12g28790.2                                                        71   4e-13
Glyma12g28790.1                                                        71   4e-13

>Glyma13g25320.1 
          Length = 155

 Score =  178 bits (452), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/160 (61%), Positives = 112/160 (70%), Gaps = 14/160 (8%)

Query: 1   MGHHNNGGSWPPIGAPLNVRADQLQHWTSNFDSTVNAVSFGFVATAILISMFLVMAIFER 60
           +G   NG  WPPIGAPLNV  D+  HWT NFDS+VNAVSFGFVATAILISMFLVMAIFER
Sbjct: 3   VGEQTNG--WPPIGAPLNVHRDE--HWT-NFDSSVNAVSFGFVATAILISMFLVMAIFER 57

Query: 61  FLXXXX------XXXXXXXXXAVESQVALGGKLGHSSPKMNGYGSWVSVLMPGEETPSFI 114
           +L                    VE+Q+   GKL H+SPKM+ Y S VSVLMPG+E P+FI
Sbjct: 58  YLRPTSPPLSPSATTRRRSPSDVEAQIGFSGKLAHASPKMSVYASGVSVLMPGDEIPTFI 117

Query: 115 AHPAPAPCSPERISWPSHHQNKTLPCSTSNIIP-PNIDQV 153
           AH  PAPC PERISWPSH  N TLPCS+SN +P   I+QV
Sbjct: 118 AH--PAPCYPERISWPSHQHNNTLPCSSSNTLPTTTINQV 155


>Glyma15g07540.1 
          Length = 154

 Score =  177 bits (448), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 100/154 (64%), Positives = 109/154 (70%), Gaps = 6/154 (3%)

Query: 3   HHNNGGSWPPIGAPLNVRADQL-QHWTSNFDSTVNAVSFGFVATAILISMFLVMAIFERF 61
            HN    WPPIGAPLNV+ D+  QHW SNFDS+VNAVSFGFVATAILISMFLVMAIFERF
Sbjct: 4   EHNINSGWPPIGAPLNVQRDEYDQHW-SNFDSSVNAVSFGFVATAILISMFLVMAIFERF 62

Query: 62  LXXXXXXXXXXX--XXAVESQVALGGKLGHSSPKMNGYGSWVSVLMPGEETPSFIAHPAP 119
           L                  SQ+   GKL H SPKM+ Y SWVSVLMPG+ TPSFIA P P
Sbjct: 63  LKPTSPALLPSGGWNRRRSSQMDFNGKLAHPSPKMSLYTSWVSVLMPGDVTPSFIAQPVP 122

Query: 120 APCSPERISWPSHHQNKTLPCSTSNIIPPNIDQV 153
           APC PERISWPSH  N TLP ST N + P+I+QV
Sbjct: 123 APCCPERISWPSHQHN-TLPYSTYNTM-PSINQV 154


>Glyma13g31750.1 
          Length = 155

 Score =  174 bits (440), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 97/148 (65%), Positives = 107/148 (72%), Gaps = 6/148 (4%)

Query: 4   HNNGGSWPPIGAPL-NVRADQL-QHWTSNFDSTVNAVSFGFVATAILISMFLVMAIFERF 61
           HN    WPPIGAPL NV+ D+  QHW+S FDS+VNAVSFGFVATAIL+SMFLVMAIFERF
Sbjct: 5   HNINSGWPPIGAPLLNVQRDEYDQHWSS-FDSSVNAVSFGFVATAILVSMFLVMAIFERF 63

Query: 62  LXXXX--XXXXXXXXXAVESQVALGGKLGHSSPKMNGYGSWVSVLMPGEETPSFIAHPAP 119
           L                  SQ+   GKLGH SPKM+ Y SWVSVLMPG+ TPSFIAHP P
Sbjct: 64  LKPTSPPILPSGGRNRRRSSQMDFNGKLGHPSPKMSLYASWVSVLMPGDATPSFIAHPVP 123

Query: 120 APCSPERISWPSHHQNKTLPCSTSNIIP 147
           APC PERISWPS HQ+ TLP ST N +P
Sbjct: 124 APCCPERISWPS-HQHSTLPYSTYNTMP 150


>Glyma06g45130.1 
          Length = 151

 Score =  121 bits (303), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/127 (52%), Positives = 82/127 (64%), Gaps = 2/127 (1%)

Query: 12  PIGAPLNVRADQLQHWTSNFDSTVNAVSFGFVATAILISMFLVMAIFERFLXXXXXXXXX 71
           P+ AP      +  HW  +FD +VNAVSFGFVATAILISMFL++AIFERFL         
Sbjct: 9   PMVAPFGSNTQRPDHW-KHFDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEANN 67

Query: 72  XXX-XAVESQVALGGKLGHSSPKMNGYGSWVSVLMPGEETPSFIAHPAPAPCSPERISWP 130
                 +E Q+ LGGKL + S KM  YG  V VLMPGE+ PSFIA P+PAPCS + +SWP
Sbjct: 68  VATPMDLEHQMHLGGKLENLSSKMTIYGRGVLVLMPGEQIPSFIALPSPAPCSRQPMSWP 127

Query: 131 SHHQNKT 137
              Q+ +
Sbjct: 128 IQVQHNS 134


>Glyma12g11860.1 
          Length = 157

 Score =  119 bits (297), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/127 (52%), Positives = 81/127 (63%), Gaps = 3/127 (2%)

Query: 12  PIGAPLNVRADQLQHWTSNFDSTVNAVSFGFVATAILISMFLVMAIFERFLXXXXXXXXX 71
           P+ AP +    +  HW  +FD +VNAVSFGFVATAILISMFL++AIFERFL         
Sbjct: 9   PVVAPFST-TQRPDHW-KHFDDSVNAVSFGFVATAILISMFLLLAIFERFLRQRSSEANN 66

Query: 72  XXX-XAVESQVALGGKLGHSSPKMNGYGSWVSVLMPGEETPSFIAHPAPAPCSPERISWP 130
                 +E Q+  G KL + SPKM  YG  V VLMPGE+ PSFIA PAPAPC  E +SWP
Sbjct: 67  VATPIDLERQMHFGRKLENLSPKMTIYGRGVLVLMPGEQIPSFIALPAPAPCCREPMSWP 126

Query: 131 SHHQNKT 137
              Q+ +
Sbjct: 127 IQVQHNS 133


>Glyma07g31160.1 
          Length = 77

 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/59 (76%), Positives = 50/59 (84%), Gaps = 3/59 (5%)

Query: 4  HNNGGSWPPIGAPLNVRADQLQHWTSNFDSTVNAVSFGFVATAILISMFLVMAIFERFL 62
          H    +WPPIGAPL+V  D+  HWT NFDS+VNAVSFGFVATA+LISMFLVMAIFERFL
Sbjct: 6  HTITNAWPPIGAPLDVHRDE--HWT-NFDSSVNAVSFGFVATAVLISMFLVMAIFERFL 61


>Glyma16g00450.2 
          Length = 141

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 64/113 (56%), Gaps = 5/113 (4%)

Query: 22  DQLQHWTSNFDSTVNAVSFGFVATAILISMFLVMAIFERFLXXXXXXXXXXXXXAVESQV 81
           D+   W S   ++++A+SFGFVATAILISMFL+MAIFE  L              ++ Q 
Sbjct: 27  DEEAPWKS-LGTSMSAISFGFVATAILISMFLIMAIFEH-LFKPTPPESMLRRYQIQDQP 84

Query: 82  ALGGKLGHSSPKMNGYGSWVSVLMPGEETPSFIAHPAP-APCSPERISWPSHH 133
              G    S P  N Y S  SVLMPG++ P++IA PAP  P   E + WPSH 
Sbjct: 85  GKQGN-AQSVPASN-YASDFSVLMPGQQYPTYIAQPAPLLPSQREGVYWPSHE 135


>Glyma16g00450.1 
          Length = 141

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 64/113 (56%), Gaps = 5/113 (4%)

Query: 22  DQLQHWTSNFDSTVNAVSFGFVATAILISMFLVMAIFERFLXXXXXXXXXXXXXAVESQV 81
           D+   W S   ++++A+SFGFVATAILISMFL+MAIFE  L              ++ Q 
Sbjct: 27  DEEAPWKS-LGTSMSAISFGFVATAILISMFLIMAIFEH-LFKPTPPESMLRRYQIQDQP 84

Query: 82  ALGGKLGHSSPKMNGYGSWVSVLMPGEETPSFIAHPAP-APCSPERISWPSHH 133
              G    S P  N Y S  SVLMPG++ P++IA PAP  P   E + WPSH 
Sbjct: 85  GKQGN-AQSVPASN-YASDFSVLMPGQQYPTYIAQPAPLLPSQREGVYWPSHE 135


>Glyma12g28790.2 
          Length = 140

 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 62/120 (51%), Gaps = 8/120 (6%)

Query: 16  PLNVRADQLQHWTSNFDSTVNAVSFGFVATAILISMFLVMAIFERFLXXXXXXXXXXXXX 75
           P     D+   W S   ++++A+SFGFVATAILISMFL+MAIFE                
Sbjct: 19  PSQTGVDEEAPWKS-LGTSMSAISFGFVATAILISMFLIMAIFEHLFKPTSQFSTPESML 77

Query: 76  AVESQVALGGKLG--HSSPKMNGYGSWVSVLMPGEETPSFIAHPAP-APCSPERISWPSH 132
                    GK G   S P  + +    SVLMPG++ P++IA PAP  P   E + WPSH
Sbjct: 78  RRYQIQDHPGKHGNAQSVPAASNF----SVLMPGQQYPTYIAQPAPLLPSQREGVYWPSH 133


>Glyma12g28790.1 
          Length = 140

 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 62/120 (51%), Gaps = 8/120 (6%)

Query: 16  PLNVRADQLQHWTSNFDSTVNAVSFGFVATAILISMFLVMAIFERFLXXXXXXXXXXXXX 75
           P     D+   W S   ++++A+SFGFVATAILISMFL+MAIFE                
Sbjct: 19  PSQTGVDEEAPWKS-LGTSMSAISFGFVATAILISMFLIMAIFEHLFKPTSQFSTPESML 77

Query: 76  AVESQVALGGKLG--HSSPKMNGYGSWVSVLMPGEETPSFIAHPAP-APCSPERISWPSH 132
                    GK G   S P  + +    SVLMPG++ P++IA PAP  P   E + WPSH
Sbjct: 78  RRYQIQDHPGKHGNAQSVPAASNF----SVLMPGQQYPTYIAQPAPLLPSQREGVYWPSH 133